Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:50:58 (16058): wrapper (7.7.26015): starting
20:50:58 (16058): wrapper: running run_atlas (--nthreads 10)
[2025-04-14 20:50:58] Arguments: --nthreads 10
[2025-04-14 20:50:58] Threads: 10
[2025-04-14 20:50:58] Checking for CVMFS
[2025-04-14 20:50:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-14 20:51:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-14 20:51:00] Running cvmfs_config stat atlas.cern.ch
[2025-04-14 20:51:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-14 20:51:01] 2.11.2.0 31676 35891 234884 144869 1 342 10269149 18432001 13152 130560 0 150633828 98.956 362019076 35812 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-14 20:51:01] CVMFS is ok
[2025-04-14 20:51:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-14 20:51:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-14 20:51:01] Further information can be found at the LHC@home message board.
[2025-04-14 20:51:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-14 20:51:01] Checking for apptainer binary...
[2025-04-14 20:51:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-14 20:51:01] Running /usr/bin/apptainer --version
[2025-04-14 20:51:01] apptainer version 1.3.2-1.el7
[2025-04-14 20:51:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-14 20:51:21] c-210-5.aglt2.org
[2025-04-14 20:51:21] apptainer works
[2025-04-14 20:51:22] Set ATHENA_PROC_NUMBER=10
[2025-04-14 20:51:22] Set ATHENA_CORE_NUMBER=10
[2025-04-14 20:51:22] Starting ATLAS job with PandaID=6602106106
[2025-04-14 20:51:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
10:00:09 (16058): BOINC client no longer exists - exiting
10:00:09 (16058): timer handler: client dead, exiting
10:12:36 (24502): wrapper (7.7.26015): starting
10:12:36 (24502): wrapper: running run_atlas (--nthreads 10)
[2025-04-15 10:12:36] Arguments: --nthreads 10
[2025-04-15 10:12:36] Threads: 10
[2025-04-15 10:12:36] This job has been restarted, cleaning up previous attempt
[2025-04-15 10:12:37] Checking for CVMFS
[2025-04-15 10:12:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-15 10:12:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-15 10:12:39] Running cvmfs_config stat atlas.cern.ch
[2025-04-15 10:12:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-15 10:12:40] 2.11.2.0 31676 36693 230268 144889 1 238 10918153 18432001 17323 130560 0 152993519 98.952 368126287 35781 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-15 10:12:40] CVMFS is ok
[2025-04-15 10:12:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-15 10:12:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-15 10:12:40] Further information can be found at the LHC@home message board.
[2025-04-15 10:12:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-15 10:12:40] Checking for apptainer binary...
[2025-04-15 10:12:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-15 10:12:40] Running /usr/bin/apptainer --version
[2025-04-15 10:12:41] apptainer version 1.3.2-1.el7
[2025-04-15 10:12:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-15 10:13:07] c-210-5.aglt2.org
[2025-04-15 10:13:07] apptainer works
[2025-04-15 10:13:08] Set ATHENA_PROC_NUMBER=10
[2025-04-15 10:13:08] Set ATHENA_CORE_NUMBER=10
[2025-04-15 10:13:08] Starting ATLAS job with PandaID=6602106106
[2025-04-15 10:13:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 03:03:14]  *** The last 200 lines of the pilot log: ***
[2025-04-16 03:03:14] 2025-04-16 07:02:54,039 | INFO     | sum of deviations: 1299536008054.368
[2025-04-16 03:03:14] 2025-04-16 07:02:54,040 | INFO     | mean x: 1744757063.6418366
[2025-04-16 03:03:14] 2025-04-16 07:02:54,040 | INFO     | mean y: 2528777.1520408164
[2025-04-16 03:03:14] 2025-04-16 07:02:54,040 | INFO     | -- intersect: -7766633356.524043
[2025-04-16 03:03:14] 2025-04-16 07:02:54,040 | INFO     | intersect: -7766633356.524043
[2025-04-16 03:03:14] 2025-04-16 07:02:54,041 | INFO     | chi2: 9.078214208308752
[2025-04-16 03:03:14] 2025-04-16 07:02:54,042 | INFO     | current chi2=9.078214208308752 (change=33.96893815110304 %)
[2025-04-16 03:03:14] 2025-04-16 07:02:54,043 | INFO     | sum of square deviations: 287398288720.0269
[2025-04-16 03:03:14] 2025-04-16 07:02:54,066 | INFO     | sum of deviations: 997517547736.5325
[2025-04-16 03:03:14] 2025-04-16 07:02:54,066 | INFO     | mean x: 1744757216.1466668
[2025-04-16 03:03:14] 2025-04-16 07:02:54,066 | INFO     | mean y: 2539138.8564102566
[2025-04-16 03:03:14] 2025-04-16 07:02:54,067 | INFO     | -- intersect: -6053258713.65517
[2025-04-16 03:03:14] 2025-04-16 07:02:54,067 | INFO     | intersect: -6053258713.65517
[2025-04-16 03:03:14] 2025-04-16 07:02:54,068 | INFO     | chi2: 5.7721037892831975
[2025-04-16 03:03:14] 2025-04-16 07:02:54,068 | INFO     | current chi2=5.7721037892831975 (change=36.418070153044724 %)
[2025-04-16 03:03:14] 2025-04-16 07:02:54,070 | INFO     | sum of square deviations: 282998990825.91797
[2025-04-16 03:03:14] 2025-04-16 07:02:54,093 | INFO     | sum of deviations: 759453066493.2988
[2025-04-16 03:03:14] 2025-04-16 07:02:54,093 | INFO     | mean x: 1744757368.6525774
[2025-04-16 03:03:14] 2025-04-16 07:02:54,094 | INFO     | mean y: 2547390.4608247424
[2025-04-16 03:03:14] 2025-04-16 07:02:54,094 | INFO     | -- intersect: -4679664832.426811
[2025-04-16 03:03:14] 2025-04-16 07:02:54,094 | INFO     | intersect: -4679664832.426811
[2025-04-16 03:03:14] 2025-04-16 07:02:54,095 | INFO     | chi2: 3.7824108908050738
[2025-04-16 03:03:14] 2025-04-16 07:02:54,095 | INFO     | current chi2=3.7824108908050738 (change=34.470844099724886 %)
[2025-04-16 03:03:14] 2025-04-16 07:02:54,097 | INFO     | sum of square deviations: 278644868984.0578
[2025-04-16 03:03:14] 2025-04-16 07:02:54,119 | INFO     | sum of deviations: 540258513905.0777
[2025-04-16 03:03:14] 2025-04-16 07:02:54,120 | INFO     | mean x: 1744757521.157513
[2025-04-16 03:03:14] 2025-04-16 07:02:54,120 | INFO     | mean y: 2555067.7823834196
[2025-04-16 03:03:14] 2025-04-16 07:02:54,120 | INFO     | -- intersect: -3380317579.1896143
[2025-04-16 03:03:14] 2025-04-16 07:02:54,120 | INFO     | intersect: -3380317579.1896143
[2025-04-16 03:03:14] 2025-04-16 07:02:54,121 | INFO     | chi2: 2.1181137140903457
[2025-04-16 03:03:14] 2025-04-16 07:02:54,121 | INFO     | current chi2=2.1181137140903457 (change=44.00096194627041 %)
[2025-04-16 03:03:14] 2025-04-16 07:02:54,123 | INFO     | sum of square deviations: 274335690936.97412
[2025-04-16 03:03:14] 2025-04-16 07:02:54,146 | INFO     | sum of deviations: 388263606324.59406
[2025-04-16 03:03:14] 2025-04-16 07:02:54,146 | INFO     | mean x: 1744757673.6614583
[2025-04-16 03:03:14] 2025-04-16 07:02:54,146 | INFO     | mean y: 2560442.91875
[2025-04-16 03:03:14] 2025-04-16 07:02:54,147 | INFO     | -- intersect: -2466771579.5556383
[2025-04-16 03:03:14] 2025-04-16 07:02:54,147 | INFO     | intersect: -2466771579.5556383
[2025-04-16 03:03:14] 2025-04-16 07:02:54,148 | INFO     | chi2: 1.2684397863192576
[2025-04-16 03:03:14] 2025-04-16 07:02:54,148 | INFO     | current chi2=1.2684397863192576 (change=40.114651169047015 %)
[2025-04-16 03:03:14] 2025-04-16 07:02:54,150 | INFO     | sum of square deviations: 270071223085.18964
[2025-04-16 03:03:14] 2025-04-16 07:02:54,172 | INFO     | sum of deviations: 296734177872.86597
[2025-04-16 03:03:14] 2025-04-16 07:02:54,173 | INFO     | mean x: 1744757826.164398
[2025-04-16 03:03:14] 2025-04-16 07:02:54,173 | INFO     | mean y: 2563714.784293194
[2025-04-16 03:03:14] 2025-04-16 07:02:54,173 | INFO     | -- intersect: -1914446447.275187
[2025-04-16 03:03:14] 2025-04-16 07:02:54,173 | INFO     | intersect: -1914446447.275187
[2025-04-16 03:03:14] 2025-04-16 07:02:54,174 | INFO     | chi2: 0.9898439152961775
[2025-04-16 03:03:14] 2025-04-16 07:02:54,175 | INFO     | current chi2=0.9898439152961775 (change=21.96366544378949 %)
[2025-04-16 03:03:14] 2025-04-16 07:02:54,175 | INFO     | left removable region: 60
[2025-04-16 03:03:14] 2025-04-16 07:02:54,176 | INFO     | sum of square deviations: 240665879864.85733
[2025-04-16 03:03:14] 2025-04-16 07:02:54,197 | INFO     | sum of deviations: 236264192676.96722
[2025-04-16 03:03:14] 2025-04-16 07:02:54,197 | INFO     | mean x: 1744758558.1686616
[2025-04-16 03:03:14] 2025-04-16 07:02:54,197 | INFO     | mean y: 2570522.2905331883
[2025-04-16 03:03:14] 2025-04-16 07:02:54,197 | INFO     | -- intersect: -1710277067.0454664
[2025-04-16 03:03:14] 2025-04-16 07:02:54,197 | INFO     | intersect: -1710277067.0454664
[2025-04-16 03:03:14] 2025-04-16 07:02:54,199 | INFO     | chi2: 0.014510395029547296
[2025-04-16 03:03:14] 2025-04-16 07:02:54,199 | INFO     | -- intersect: -1710277067.0454664
[2025-04-16 03:03:14] 2025-04-16 07:02:54,199 | INFO     | current memory leak: 0.98 B/s (using 919 data points, chi2=0.01)
[2025-04-16 03:03:14] 2025-04-16 07:02:54,201 | INFO     | ..............................
[2025-04-16 03:03:14] 2025-04-16 07:02:54,201 | INFO     | . Timing measurements:
[2025-04-16 03:03:14] 2025-04-16 07:02:54,201 | INFO     | . get job = 0 s
[2025-04-16 03:03:14] 2025-04-16 07:02:54,201 | INFO     | . initial setup = 11 s
[2025-04-16 03:03:14] 2025-04-16 07:02:54,201 | INFO     | . payload setup = 104 s
[2025-04-16 03:03:14] 2025-04-16 07:02:54,201 | INFO     | . stage-in = 1 s
[2025-04-16 03:03:14] 2025-04-16 07:02:54,201 | INFO     | . payload execution = 60166 s
[2025-04-16 03:03:14] 2025-04-16 07:02:54,201 | INFO     | . stage-out = 4 s
[2025-04-16 03:03:14] 2025-04-16 07:02:54,201 | INFO     | . log creation = 0 s
[2025-04-16 03:03:14] 2025-04-16 07:02:54,202 | INFO     | ..............................
[2025-04-16 03:03:14] 2025-04-16 07:02:54,323 | INFO     | 
[2025-04-16 03:03:14] 2025-04-16 07:02:54,323 | INFO     | job summary report
[2025-04-16 03:03:14] 2025-04-16 07:02:54,323 | INFO     | --------------------------------------------------
[2025-04-16 03:03:14] 2025-04-16 07:02:54,324 | INFO     | PanDA job id: 6602106106
[2025-04-16 03:03:14] 2025-04-16 07:02:54,324 | INFO     | task id: 44075483
[2025-04-16 03:03:14] 2025-04-16 07:02:54,324 | INFO     | errors: (none)
[2025-04-16 03:03:14] 2025-04-16 07:02:54,324 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 03:03:14] 2025-04-16 07:02:54,324 | INFO     | pilot state: finished 
[2025-04-16 03:03:14] 2025-04-16 07:02:54,324 | INFO     | transexitcode: 0
[2025-04-16 03:03:14] 2025-04-16 07:02:54,324 | INFO     | exeerrorcode: 0
[2025-04-16 03:03:14] 2025-04-16 07:02:54,324 | INFO     | exeerrordiag: 
[2025-04-16 03:03:14] 2025-04-16 07:02:54,324 | INFO     | exitcode: 0
[2025-04-16 03:03:14] 2025-04-16 07:02:54,324 | INFO     | exitmsg: OK
[2025-04-16 03:03:14] 2025-04-16 07:02:54,324 | INFO     | cpuconsumptiontime: 57905 s
[2025-04-16 03:03:14] 2025-04-16 07:02:54,325 | INFO     | nevents: 400
[2025-04-16 03:03:14] 2025-04-16 07:02:54,325 | INFO     | neventsw: 0
[2025-04-16 03:03:14] 2025-04-16 07:02:54,325 | INFO     | pid: 33650
[2025-04-16 03:03:14] 2025-04-16 07:02:54,325 | INFO     | pgrp: 33650
[2025-04-16 03:03:14] 2025-04-16 07:02:54,325 | INFO     | corecount: 10
[2025-04-16 03:03:14] 2025-04-16 07:02:54,325 | INFO     | event service: False
[2025-04-16 03:03:14] 2025-04-16 07:02:54,325 | INFO     | sizes: {0: 2417193, 1: 2417193, 2: 2417420, 3: 2417420, 14: 2417448, 25: 2417476, 36: 2417632, 48: 2417660, 59: 2417688, 67: 2417922, 70: 2417950, 60275: 2467141, 
[2025-04-16 03:03:14] 2025-04-16 07:02:54,325 | INFO     | --------------------------------------------------
[2025-04-16 03:03:14] 2025-04-16 07:02:54,325 | INFO     | 
[2025-04-16 03:03:14] 2025-04-16 07:02:54,325 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-16 03:03:14] 2025-04-16 07:02:54,353 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 03:03:14] 2025-04-16 07:02:54,353 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 03:03:14] 2025-04-16 07:02:54,353 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 03:03:14] 2025-04-16 07:02:54,353 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 03:03:14] 2025-04-16 07:02:54,353 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 03:03:14] 2025-04-16 07:02:54,353 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 03:03:14] 2025-04-16 07:02:54,354 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 03:03:14] 2025-04-16 07:02:54,354 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 03:03:14] 2025-04-16 07:02:54,354 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 03:03:14] 2025-04-16 07:02:54,354 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 03:03:14] 2025-04-16 07:02:54,354 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 03:03:14] 2025-04-16 07:02:54,354 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 03:03:14] 2025-04-16 07:02:54,354 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 03:03:14] 2025-04-16 07:02:54,354 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 03:03:14] 2025-04-16 07:02:54,354 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 03:03:14] 2025-04-16 07:02:54,354 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 03:03:14] 2025-04-16 07:02:54,355 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 03:03:14] 2025-04-16 07:02:54,355 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 03:03:14] 2025-04-16 07:02:54,355 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 03:03:14] 2025-04-16 07:02:54,355 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 03:03:14] 2025-04-16 07:02:54,355 | INFO     | job 6602106106 has completed (purged errors)
[2025-04-16 03:03:14] 2025-04-16 07:02:54,355 | INFO     | overall cleanup function is called
[2025-04-16 03:03:14] 2025-04-16 07:02:55,364 | INFO     | --- collectZombieJob: --- 10, [33650]
[2025-04-16 03:03:14] 2025-04-16 07:02:55,364 | INFO     | zombie collector waiting for pid 33650
[2025-04-16 03:03:14] 2025-04-16 07:02:55,364 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 03:03:14] 2025-04-16 07:02:55,364 | INFO     | collected zombie processes
[2025-04-16 03:03:14] 2025-04-16 07:02:55,364 | INFO     | will attempt to kill all subprocesses of pid=33650
[2025-04-16 03:03:14] 2025-04-16 07:02:55,752 | INFO     | process IDs to be killed: [33650] (in reverse order)
[2025-04-16 03:03:14] 2025-04-16 07:02:55,901 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 03:03:14] 2025-04-16 07:02:55,901 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 03:03:14] 2025-04-16 07:02:55,915 | INFO     | did not find any defunct processes belonging to 33650
[2025-04-16 03:03:14] 2025-04-16 07:02:55,929 | INFO     | did not find any defunct processes belonging to 33650
[2025-04-16 03:03:14] 2025-04-16 07:02:55,929 | INFO     | ready for new job
[2025-04-16 03:03:14] 2025-04-16 07:02:55,929 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 03:03:14] 2025-04-16 07:02:55,933 | INFO     | **************************************
[2025-04-16 03:03:14] 2025-04-16 07:02:55,933 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 03:03:14] 2025-04-16 07:02:55,933 | INFO     | **************************************
[2025-04-16 03:03:14] 2025-04-16 07:02:55,933 | INFO     | 
[2025-04-16 03:03:14] 2025-04-16 07:02:55,935 | INFO     | architecture information:
[2025-04-16 03:03:14] 2025-04-16 07:02:55,936 | INFO     | executing command: cat /etc/os-release
[2025-04-16 03:03:14] 2025-04-16 07:02:55,956 | INFO     | cat /etc/os-release:
[2025-04-16 03:03:14] NAME="CentOS Linux"
[2025-04-16 03:03:14] VERSION="7 (Core)"
[2025-04-16 03:03:14] ID="centos"
[2025-04-16 03:03:14] ID_LIKE="rhel fedora"
[2025-04-16 03:03:14] VERSION_ID="7"
[2025-04-16 03:03:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 03:03:14] ANSI_COLOR="0;31"
[2025-04-16 03:03:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 03:03:14] HOME_URL="https://www.centos.org/"
[2025-04-16 03:03:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 03:03:14] 
[2025-04-16 03:03:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 03:03:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 03:03:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 03:03:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 03:03:14] 
[2025-04-16 03:03:14] 2025-04-16 07:02:55,956 | INFO     | **************************************
[2025-04-16 03:03:14] 2025-04-16 07:02:56,460 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-16 03:03:14] 2025-04-16 07:02:56,552 | INFO     | sufficient remaining disk space (56730058752 B)
[2025-04-16 03:03:14] 2025-04-16 07:02:56,553 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 03:03:14] 2025-04-16 07:02:56,553 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 03:03:14] 2025-04-16 07:02:56,553 | INFO     | update_server=False
[2025-04-16 03:03:14] 2025-04-16 07:02:56,553 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 03:03:14] 2025-04-16 07:02:56,941 | INFO     | all payload control threads have been joined
[2025-04-16 03:03:14] 2025-04-16 07:02:56,960 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 03:03:14] 2025-04-16 07:02:57,193 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 03:03:14] 2025-04-16 07:02:57,193 | INFO     | aborting loop
[2025-04-16 03:03:14] 2025-04-16 07:02:57,224 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 03:03:14] 2025-04-16 07:02:57,224 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 03:03:14] 2025-04-16 07:02:57,224 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 03:03:14] 2025-04-16 07:02:57,305 | INFO     | all data control threads have been joined
[2025-04-16 03:03:14] 2025-04-16 07:02:57,559 | INFO     | [job] retrieve thread has finished
[2025-04-16 03:03:14] 2025-04-16 07:02:57,742 | INFO     | [payload] failed_post thread has finished
[2025-04-16 03:03:14] 2025-04-16 07:02:57,945 | INFO     | [payload] control thread has finished
[2025-04-16 03:03:14] 2025-04-16 07:02:58,014 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 03:03:14] 2025-04-16 07:02:58,058 | INFO     | all job control threads have been joined
[2025-04-16 03:03:14] 2025-04-16 07:02:58,188 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 03:03:14] 2025-04-16 07:02:58,188 | INFO     | [data] copytool_in thread has finished
[2025-04-16 03:03:14] 2025-04-16 07:02:58,198 | INFO     | [job] job monitor thread has finished
[2025-04-16 03:03:14] 2025-04-16 07:02:58,310 | INFO     | [data] control thread has finished
[2025-04-16 03:03:14] 2025-04-16 07:02:58,351 | INFO     | [payload] validate_post thread has finished
[2025-04-16 03:03:14] 2025-04-16 07:02:58,451 | INFO     | [job] validate thread has finished
[2025-04-16 03:03:14] 2025-04-16 07:02:58,617 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 03:03:14] 2025-04-16 07:02:58,657 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 03:03:14] 2025-04-16 07:02:58,966 | INFO     | [data] copytool_out thread has finished
[2025-04-16 03:03:14] 2025-04-16 07:02:59,064 | INFO     | [job] control thread has finished
[2025-04-16 03:03:14] 2025-04-16 07:02:59,336 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 03:03:14] 2025-04-16 07:03:00,343 | INFO     | [job] queue monitor thread has finished
[2025-04-16 03:03:14] 2025-04-16 07:03:02,625 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 03:03:14] 2025-04-16 07:03:07,365 | INFO     | job.realtimelogging is not enabled
[2025-04-16 03:03:14] 2025-04-16 07:03:08,370 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 03:03:14] 2025-04-16 07:03:09,378 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139967950784320)>', '<ExcThread(monitor, started 139967665788672)>']
[2025-04-16 03:03:14] 2025-04-16 07:03:10,302 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 03:03:14] 2025-04-16 07:03:10,302 | INFO     | [monitor] control thread has ended
[2025-04-16 03:03:14] 2025-04-16 07:03:14,403 | INFO     | all workflow threads have been joined
[2025-04-16 03:03:14] 2025-04-16 07:03:14,403 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 03:03:14] 2025-04-16 07:03:14,403 | INFO     | traces error code: 0
[2025-04-16 03:03:14] 2025-04-16 07:03:14,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 03:03:14] 2025-04-16 07:03:14,591 [wrapper] ==== pilot stdout END ====
[2025-04-16 03:03:14] 2025-04-16 07:03:14,595 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 03:03:14] 2025-04-16 07:03:14,599 [wrapper] pilotpid: 1281
[2025-04-16 03:03:14] 2025-04-16 07:03:14,602 [wrapper] Pilot exit status: 0
[2025-04-16 03:03:14] 2025-04-16 07:03:14,619 [wrapper] pandaids: 6602106106 6602106106
[2025-04-16 03:03:14] 2025-04-16 07:03:14,719 [wrapper] cleanup supervisor_pilot 40452 1282
[2025-04-16 03:03:14] 2025-04-16 07:03:14,723 [wrapper] Test setup, not cleaning
[2025-04-16 03:03:14] 2025-04-16 07:03:14,726 [wrapper] apfmon messages muted
[2025-04-16 03:03:14] 2025-04-16 07:03:14,729 [wrapper] ==== wrapper stdout END ====
[2025-04-16 03:03:14] 2025-04-16 07:03:14,732 [wrapper] ==== wrapper stderr END ====
[2025-04-16 03:03:14]  *** Error codes and diagnostics ***
[2025-04-16 03:03:14]     "exeErrorCode": 0,
[2025-04-16 03:03:14]     "exeErrorDiag": "",
[2025-04-16 03:03:14]     "pilotErrorCode": 0,
[2025-04-16 03:03:14]     "pilotErrorDiag": "",
[2025-04-16 03:03:14]  *** Listing of results directory ***
[2025-04-16 03:03:14] total 644264
[2025-04-16 03:03:14] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-04-16 03:03:14] -rw-r--r-- 1 boincer umatlas    495897 Apr 13 20:04 pilot3.tar.gz
[2025-04-16 03:03:14] -rwx------ 1 boincer umatlas     37140 Apr 13 20:09 runpilot2-wrapper.sh
[2025-04-16 03:03:14] -rw-r--r-- 1 boincer umatlas      5111 Apr 13 20:09 queuedata.json
[2025-04-16 03:03:14] -rw-r--r-- 1 boincer umatlas       100 Apr 14 20:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 03:03:14] -rwxr-xr-x 1 boincer umatlas      7986 Apr 14 20:50 run_atlas
[2025-04-16 03:03:14] -rw-r--r-- 1 boincer umatlas       105 Apr 14 20:50 job.xml
[2025-04-16 03:03:14] -rw-r--r-- 3 boincer umatlas 226075758 Apr 14 20:50 EVNT.44075481._000416.pool.root.1
[2025-04-16 03:03:14] -rw-r--r-- 3 boincer umatlas 226075758 Apr 14 20:50 ATLAS.root_0
[2025-04-16 03:03:14] -rw-r--r-- 2 boincer umatlas     17569 Apr 14 20:50 start_atlas.sh
[2025-04-16 03:03:14] drwxrwx--x 2 boincer umatlas      4096 Apr 14 20:50 shared
[2025-04-16 03:03:14] -rw-r--r-- 2 boincer umatlas    508895 Apr 14 20:50 input.tar.gz
[2025-04-16 03:03:14] -rw-r--r-- 1 boincer umatlas         0 Apr 14 20:50 boinc_lockfile
[2025-04-16 03:03:14] -rw-r--r-- 1 boincer umatlas      2578 Apr 15 10:13 pandaJob.out
[2025-04-16 03:03:14] -rw------- 1 boincer umatlas       467 Apr 15 10:13 setup.sh.local
[2025-04-16 03:03:14] -rw------- 1 boincer umatlas    984001 Apr 15 10:15 agis_schedconf.cvmfs.json
[2025-04-16 03:03:14] -rw-r--r-- 1 boincer umatlas      6231 Apr 16 03:00 init_data.xml
[2025-04-16 03:03:14] -rw------- 1 boincer umatlas 194129549 Apr 16 03:01 HITS.44075483._010595.pool.root.1
[2025-04-16 03:03:14] -rw-r--r-- 1 boincer umatlas       533 Apr 16 03:01 boinc_task_state.xml
[2025-04-16 03:03:14] -rw------- 1 boincer umatlas      1075 Apr 16 03:02 memory_monitor_summary.json
[2025-04-16 03:03:14] -rw------- 1 boincer umatlas   1603529 Apr 16 03:02 agis_ddmendpoints.agis.ALL.json
[2025-04-16 03:03:14] -rw------- 1 boincer umatlas    769439 Apr 16 03:02 log.44075483._010595.job.log.tgz.1
[2025-04-16 03:03:14] -rw------- 1 boincer umatlas      7760 Apr 16 03:02 heartbeat.json
[2025-04-16 03:03:14] -rw------- 1 boincer umatlas        96 Apr 16 03:02 pilot_heartbeat.json
[2025-04-16 03:03:14] -rw-r--r-- 1 boincer umatlas      8192 Apr 16 03:03 boinc_mmap_file
[2025-04-16 03:03:14] -rw-r--r-- 1 boincer umatlas        29 Apr 16 03:03 wrapper_checkpoint.txt
[2025-04-16 03:03:14] -rw------- 1 boincer umatlas      4425 Apr 16 03:03 pilotlog.txt
[2025-04-16 03:03:14] -rw------- 1 boincer umatlas   4029740 Apr 16 03:03 log.44075483._010595.job.log.1
[2025-04-16 03:03:14] -rw------- 1 boincer umatlas       357 Apr 16 03:03 output.list
[2025-04-16 03:03:14] -rw-r--r-- 1 boincer umatlas       620 Apr 16 03:03 runtime_log
[2025-04-16 03:03:14] -rw------- 1 boincer umatlas   4823040 Apr 16 03:03 result.tar.gz
[2025-04-16 03:03:14] -rw-r--r-- 1 boincer umatlas     11501 Apr 16 03:03 runtime_log.err
[2025-04-16 03:03:14] -rw------- 1 boincer umatlas       789 Apr 16 03:03 jn7KDmWZMO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmj3ULDmp3cbtm.diag
[2025-04-16 03:03:14] -rw-r--r-- 1 boincer umatlas     23134 Apr 16 03:03 stderr.txt
[2025-04-16 03:03:14] HITS file was successfully produced:
[2025-04-16 03:03:14] -rw------- 1 boincer umatlas 194129549 Apr 16 03:01 shared/HITS.pool.root.1
[2025-04-16 03:03:14]  *** Contents of shared directory: ***
[2025-04-16 03:03:14] total 415596
[2025-04-16 03:03:14] -rw-r--r-- 3 boincer umatlas 226075758 Apr 14 20:50 ATLAS.root_0
[2025-04-16 03:03:14] -rw-r--r-- 2 boincer umatlas     17569 Apr 14 20:50 start_atlas.sh
[2025-04-16 03:03:14] -rw-r--r-- 2 boincer umatlas    508895 Apr 14 20:50 input.tar.gz
[2025-04-16 03:03:14] -rw------- 1 boincer umatlas 194129549 Apr 16 03:01 HITS.pool.root.1
[2025-04-16 03:03:14] -rw------- 1 boincer umatlas   4823040 Apr 16 03:03 result.tar.gz
03:03:16 (24502): run_atlas exited; CPU time 60005.349511
03:03:16 (24502): called boinc_finish(0)

</stderr_txt>
]]>

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