Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:57:47 (785678): wrapper (7.7.26015): starting
19:57:47 (785678): wrapper: running run_atlas (--nthreads 12)
[2025-04-15 19:57:47] Arguments: --nthreads 12
[2025-04-15 19:57:47] Threads: 12
[2025-04-15 19:57:47] Checking for CVMFS
[2025-04-15 19:57:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-15 19:57:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-15 19:57:48] Running cvmfs_config stat atlas.cern.ch
[2025-04-15 19:57:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-15 19:57:48] 2.11.5.0 292814 5506 90508 144897 1 67 2973416 4097025 0 130560 0 5071541 99.872 1694327 16059 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://137.138.123.72:3128 1
[2025-04-15 19:57:48] CVMFS is ok
[2025-04-15 19:57:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-15 19:57:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-15 19:57:48] Further information can be found at the LHC@home message board.
[2025-04-15 19:57:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-15 19:57:48] Checking for apptainer binary...
[2025-04-15 19:57:48] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-04-15 19:57:48] apptainer is not installed, using version from CVMFS
[2025-04-15 19:57:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-15 19:57:48] pckelar2.cern.ch
[2025-04-15 19:57:48] apptainer works
[2025-04-15 19:57:48] Set ATHENA_PROC_NUMBER=12
[2025-04-15 19:57:48] Set ATHENA_CORE_NUMBER=12
[2025-04-15 19:57:48] Starting ATLAS job with PandaID=6600289399
[2025-04-15 19:57:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-15 21:05:52]  *** The last 200 lines of the pilot log: ***
[2025-04-15 21:05:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-15 21:05:52]  replicas=None
[2025-04-15 21:05:52]  scope=mc23_13p6TeV
[2025-04-15 21:05:52]  status=None
[2025-04-15 21:05:52]  status_code=0
[2025-04-15 21:05:52]  storage_token=
[2025-04-15 21:05:52]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6600289399/log.44075164._030687.job.log.tgz.1
[2025-04-15 21:05:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/7d/log.44075164._030687.job.log.tgz.1
[2025-04-15 21:05:52]  workdir=None
[2025-04-15 21:05:52] ]
[2025-04-15 21:05:52] 2025-04-15 19:05:23,614 | INFO     | transferring file log.44075164._030687.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6600289399/log.44075164._030687.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-04-15 21:05:52] 2025-04-15 19:05:23,614 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6600289399/log.44075164._030687.job.log.tgz.1 /var/lib/boinc/slots/0/log.44075164._030687.job
[2025-04-15 21:05:52] 2025-04-15 19:05:23,630 | INFO     | adding to output.list: log.44075164._030687.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/7d/log.44075164._030687.job.log.tg
[2025-04-15 21:05:52] 2025-04-15 19:05:23,630 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-15 21:05:52] 2025-04-15 19:05:23,631 | INFO     | summary of transferred files:
[2025-04-15 21:05:52] 2025-04-15 19:05:23,631 | INFO     |  -- lfn=log.44075164._030687.job.log.tgz.1, status_code=0, status=transferred
[2025-04-15 21:05:52] 2025-04-15 19:05:23,631 | INFO     | stage-out finished correctly
[2025-04-15 21:05:52] 2025-04-15 19:05:25,341 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-15 21:05:52] 2025-04-15 19:05:26,908 | WARNING  | process 796954 can no longer be monitored (due to stat problems) - aborting
[2025-04-15 21:05:52] 2025-04-15 19:05:26,908 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6600289399/memory_monitor_summary.json (trf name=prmon)
[2025-04-15 21:05:52] 2025-04-15 19:05:26,981 | INFO     | number of running child processes to parent process 796954: 1
[2025-04-15 21:05:52] 2025-04-15 19:05:26,981 | INFO     | maximum number of monitored processes: 6
[2025-04-15 21:05:52] 2025-04-15 19:05:27,704 | INFO     | job 6600289399 has state=finished
[2025-04-15 21:05:52] 2025-04-15 19:05:27,704 | INFO     | preparing for final server update for job 6600289399 in state='finished'
[2025-04-15 21:05:52] 2025-04-15 19:05:28,240 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-04-15 21:05:52] 2025-04-15 19:05:28,241 | INFO     | this job has now completed (state=finished)
[2025-04-15 21:05:52] 2025-04-15 19:05:28,241 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-15 21:05:52] 2025-04-15 19:05:28,241 | INFO     | log transfer has been attempted: DONE
[2025-04-15 21:05:52] 2025-04-15 19:05:28,241 | INFO     | job 6600289399 has finished - writing final server update
[2025-04-15 21:05:52] 2025-04-15 19:05:28,241 | INFO     | total number of processed events: 400 (read)
[2025-04-15 21:05:52] 2025-04-15 19:05:28,254 | INFO     | executing command: lscpu
[2025-04-15 21:05:52] 2025-04-15 19:05:28,299 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-15 21:05:52] 2025-04-15 19:05:29,484 | INFO     | monitor loop #303: job 0:6600289399 is in state 'finished'
[2025-04-15 21:05:52] 2025-04-15 19:05:29,484 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 21:05:52] 2025-04-15 19:05:29,639 | INFO     | PID=789442 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-15 21:05:52] 2025-04-15 19:05:31,987 | INFO     | monitor loop #304: job 0:6600289399 is in state 'finished'
[2025-04-15 21:05:52] 2025-04-15 19:05:31,987 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 21:05:52] 2025-04-15 19:05:32,441 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-15 21:05:52] 2025-04-15 19:05:32,441 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6600289399/memory_monitor_summary.json (trf name=prmon)
[2025-04-15 21:05:52] 2025-04-15 19:05:32,442 | INFO     | extracted standard info from prmon json
[2025-04-15 21:05:52] 2025-04-15 19:05:32,442 | INFO     | extracted standard memory fields from prmon json
[2025-04-15 21:05:52] 2025-04-15 19:05:32,442 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-15 21:05:52] 2025-04-15 19:05:32,442 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-15 21:05:52] 2025-04-15 19:05:32,443 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-15 21:05:52] 2025-04-15 19:05:32,444 | INFO     | fitting pss+swap vs Time
[2025-04-15 21:05:52] 2025-04-15 19:05:32,444 | INFO     | sum of square deviations: 63666310.0
[2025-04-15 21:05:52] 2025-04-15 19:05:32,444 | INFO     | sum of deviations: -2170918691.0
[2025-04-15 21:05:52] 2025-04-15 19:05:32,444 | INFO     | mean x: 1744741972.0
[2025-04-15 21:05:52] 2025-04-15 19:05:32,444 | INFO     | mean y: 2423933.4576271186
[2025-04-15 21:05:52] 2025-04-15 19:05:32,445 | INFO     | -- intersect: 59495316767.78395
[2025-04-15 21:05:52] 2025-04-15 19:05:32,445 | INFO     | intersect: 59495316767.78395
[2025-04-15 21:05:52] 2025-04-15 19:05:32,445 | INFO     | chi2: 0.08136881942691836
[2025-04-15 21:05:52] 2025-04-15 19:05:32,445 | INFO     | -- intersect: 59495316767.78395
[2025-04-15 21:05:52] 2025-04-15 19:05:32,445 | INFO     | current memory leak: -34.10 B/s (using 59 data points, chi2=0.08)
[2025-04-15 21:05:52] 2025-04-15 19:05:32,445 | INFO     | ..............................
[2025-04-15 21:05:52] 2025-04-15 19:05:32,446 | INFO     | . Timing measurements:
[2025-04-15 21:05:52] 2025-04-15 19:05:32,446 | INFO     | . get job = 0 s
[2025-04-15 21:05:52] 2025-04-15 19:05:32,446 | INFO     | . initial setup = 1 s
[2025-04-15 21:05:52] 2025-04-15 19:05:32,446 | INFO     | . payload setup = 5 s
[2025-04-15 21:05:52] 2025-04-15 19:05:32,446 | INFO     | . stage-in = 0 s
[2025-04-15 21:05:52] 2025-04-15 19:05:32,446 | INFO     | . payload execution = 4024 s
[2025-04-15 21:05:52] 2025-04-15 19:05:32,446 | INFO     | . stage-out = 0 s
[2025-04-15 21:05:52] 2025-04-15 19:05:32,446 | INFO     | . log creation = 0 s
[2025-04-15 21:05:52] 2025-04-15 19:05:32,446 | INFO     | ..............................
[2025-04-15 21:05:52] 2025-04-15 19:05:32,702 | INFO     | 
[2025-04-15 21:05:52] 2025-04-15 19:05:32,702 | INFO     | job summary report
[2025-04-15 21:05:52] 2025-04-15 19:05:32,702 | INFO     | --------------------------------------------------
[2025-04-15 21:05:52] 2025-04-15 19:05:32,702 | INFO     | PanDA job id: 6600289399
[2025-04-15 21:05:52] 2025-04-15 19:05:32,702 | INFO     | task id: 44075164
[2025-04-15 21:05:52] 2025-04-15 19:05:32,702 | INFO     | errors: (none)
[2025-04-15 21:05:52] 2025-04-15 19:05:32,702 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-15 21:05:52] 2025-04-15 19:05:32,702 | INFO     | pilot state: finished 
[2025-04-15 21:05:52] 2025-04-15 19:05:32,702 | INFO     | transexitcode: 0
[2025-04-15 21:05:52] 2025-04-15 19:05:32,702 | INFO     | exeerrorcode: 0
[2025-04-15 21:05:52] 2025-04-15 19:05:32,703 | INFO     | exeerrordiag: 
[2025-04-15 21:05:52] 2025-04-15 19:05:32,703 | INFO     | exitcode: 0
[2025-04-15 21:05:52] 2025-04-15 19:05:32,703 | INFO     | exitmsg: OK
[2025-04-15 21:05:52] 2025-04-15 19:05:32,703 | INFO     | cpuconsumptiontime: 44210 s
[2025-04-15 21:05:52] 2025-04-15 19:05:32,703 | INFO     | nevents: 400
[2025-04-15 21:05:52] 2025-04-15 19:05:32,703 | INFO     | neventsw: 0
[2025-04-15 21:05:52] 2025-04-15 19:05:32,703 | INFO     | pid: 796954
[2025-04-15 21:05:52] 2025-04-15 19:05:32,703 | INFO     | pgrp: 796954
[2025-04-15 21:05:52] 2025-04-15 19:05:32,703 | INFO     | corecount: 12
[2025-04-15 21:05:52] 2025-04-15 19:05:32,703 | INFO     | event service: False
[2025-04-15 21:05:52] 2025-04-15 19:05:32,703 | INFO     | sizes: {0: 2417276, 3: 2417482, 11: 2417510, 4034: 2452268, 4036: 2452268, 4043: 2452438}
[2025-04-15 21:05:52] 2025-04-15 19:05:32,703 | INFO     | --------------------------------------------------
[2025-04-15 21:05:52] 2025-04-15 19:05:32,704 | INFO     | 
[2025-04-15 21:05:52] 2025-04-15 19:05:32,704 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-04-15 21:05:52] 2025-04-15 19:05:32,723 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-15 21:05:52] 2025-04-15 19:05:32,723 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-15 21:05:52] 2025-04-15 19:05:32,723 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-15 21:05:52] 2025-04-15 19:05:32,724 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-15 21:05:52] 2025-04-15 19:05:32,724 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-15 21:05:52] 2025-04-15 19:05:32,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-15 21:05:52] 2025-04-15 19:05:32,724 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-15 21:05:52] 2025-04-15 19:05:32,724 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-15 21:05:52] 2025-04-15 19:05:32,724 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-15 21:05:52] 2025-04-15 19:05:32,724 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-15 21:05:52] 2025-04-15 19:05:32,724 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-15 21:05:52] 2025-04-15 19:05:32,724 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-15 21:05:52] 2025-04-15 19:05:32,724 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-15 21:05:52] 2025-04-15 19:05:32,724 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-15 21:05:52] 2025-04-15 19:05:32,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-15 21:05:52] 2025-04-15 19:05:32,725 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-15 21:05:52] 2025-04-15 19:05:32,725 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-15 21:05:52] 2025-04-15 19:05:32,725 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-15 21:05:52] 2025-04-15 19:05:32,725 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-15 21:05:52] 2025-04-15 19:05:32,725 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-15 21:05:52] 2025-04-15 19:05:32,725 | INFO     | job 6600289399 has completed (purged errors)
[2025-04-15 21:05:52] 2025-04-15 19:05:32,725 | INFO     | overall cleanup function is called
[2025-04-15 21:05:52] 2025-04-15 19:05:33,732 | INFO     | --- collectZombieJob: --- 10, [796954]
[2025-04-15 21:05:52] 2025-04-15 19:05:33,732 | INFO     | zombie collector waiting for pid 796954
[2025-04-15 21:05:52] 2025-04-15 19:05:33,732 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-15 21:05:52] 2025-04-15 19:05:33,733 | INFO     | collected zombie processes
[2025-04-15 21:05:52] 2025-04-15 19:05:33,733 | INFO     | will attempt to kill all subprocesses of pid=796954
[2025-04-15 21:05:52] 2025-04-15 19:05:33,810 | INFO     | process IDs to be killed: [796954] (in reverse order)
[2025-04-15 21:05:52] 2025-04-15 19:05:33,846 | WARNING  | found no corresponding commands to process id(s)
[2025-04-15 21:05:52] 2025-04-15 19:05:33,846 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-15 21:05:52] 2025-04-15 19:05:33,848 | INFO     | did not find any defunct processes belonging to 796954
[2025-04-15 21:05:52] 2025-04-15 19:05:33,850 | INFO     | did not find any defunct processes belonging to 796954
[2025-04-15 21:05:52] 2025-04-15 19:05:33,851 | INFO     | ready for new job
[2025-04-15 21:05:52] 2025-04-15 19:05:33,851 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-15 21:05:52] 2025-04-15 19:05:33,852 | INFO     | **************************************
[2025-04-15 21:05:52] 2025-04-15 19:05:33,852 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-15 21:05:52] 2025-04-15 19:05:33,852 | INFO     | **************************************
[2025-04-15 21:05:52] 2025-04-15 19:05:33,852 | INFO     | 
[2025-04-15 21:05:52] 2025-04-15 19:05:33,865 | INFO     | architecture information:
[2025-04-15 21:05:52] 2025-04-15 19:05:33,865 | INFO     | executing command: cat /etc/os-release
[2025-04-15 21:05:52] 2025-04-15 19:05:33,877 | INFO     | cat /etc/os-release:
[2025-04-15 21:05:52] NAME="CentOS Linux"
[2025-04-15 21:05:52] VERSION="7 (Core)"
[2025-04-15 21:05:52] ID="centos"
[2025-04-15 21:05:52] ID_LIKE="rhel fedora"
[2025-04-15 21:05:52] VERSION_ID="7"
[2025-04-15 21:05:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-15 21:05:52] ANSI_COLOR="0;31"
[2025-04-15 21:05:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-15 21:05:52] HOME_URL="https://www.centos.org/"
[2025-04-15 21:05:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-15 21:05:52] 
[2025-04-15 21:05:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-15 21:05:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-15 21:05:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-15 21:05:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-15 21:05:52] 
[2025-04-15 21:05:52] 2025-04-15 19:05:33,877 | INFO     | **************************************
[2025-04-15 21:05:52] 2025-04-15 19:05:34,380 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-04-15 21:05:52] 2025-04-15 19:05:34,391 | INFO     | sufficient remaining disk space (226196717568 B)
[2025-04-15 21:05:52] 2025-04-15 19:05:34,391 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-15 21:05:52] 2025-04-15 19:05:34,391 | INFO     | current server update state: UPDATING_FINAL
[2025-04-15 21:05:52] 2025-04-15 19:05:34,391 | INFO     | update_server=False
[2025-04-15 21:05:52] 2025-04-15 19:05:34,391 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-15 21:05:52] 2025-04-15 19:05:34,391 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-15 21:05:52] 2025-04-15 19:05:34,392 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-15 21:05:52] 2025-04-15 19:05:34,392 | INFO     | found 0 job(s) in 20 queues
[2025-04-15 21:05:52] 2025-04-15 19:05:34,392 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-15 21:05:52] 2025-04-15 19:05:34,392 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-15 21:05:52] 2025-04-15 19:05:34,392 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-15 21:05:52] 2025-04-15 19:05:34,490 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-15 21:05:52] 2025-04-15 19:05:34,490 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-15 21:05:52] 2025-04-15 19:05:34,490 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-15 21:05:52] 2025-04-15 19:05:34,491 | INFO     | will abort loop
[2025-04-15 21:05:52] 2025-04-15 19:05:34,567 | INFO     | all data control threads have been joined
[2025-04-15 21:05:52] 2025-04-15 19:05:35,128 | INFO     | all job control threads have been joined
[2025-04-15 21:05:52] 2025-04-15 19:05:35,396 | INFO     | [job] retrieve thread has finished
[2025-04-15 21:05:52] 2025-04-15 19:05:35,397 | INFO     | [job] queue monitor thread has finished
[2025-04-15 21:05:52] 2025-04-15 19:05:35,470 | INFO     | all payload control threads have been joined
[2025-04-15 21:05:52] 2025-04-15 19:05:35,496 | INFO     | [job] job monitor thread has finished
[2025-04-15 21:05:52] 2025-04-15 19:05:35,554 | INFO     | [data] copytool_in thread has finished
[2025-04-15 21:05:52] 2025-04-15 19:05:35,572 | INFO     | [data] control thread has finished
[2025-04-15 21:05:52] 2025-04-15 19:05:35,742 | INFO     | [job] create_data_payload thread has finished
[2025-04-15 21:05:52] 2025-04-15 19:05:35,912 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-15 21:05:52] 2025-04-15 19:05:35,918 | INFO     | [payload] execute_payloads thread has finished
[2025-04-15 21:05:52] 2025-04-15 19:05:36,133 | INFO     | [job] control thread has finished
[2025-04-15 21:05:52] 2025-04-15 19:05:36,183 | INFO     | [payload] failed_post thread has finished
[2025-04-15 21:05:52] 2025-04-15 19:05:36,398 | INFO     | [data] copytool_out thread has finished
[2025-04-15 21:05:52] 2025-04-15 19:05:36,475 | INFO     | [payload] control thread has finished
[2025-04-15 21:05:52] 2025-04-15 19:05:36,711 | INFO     | [job] validate thread has finished
[2025-04-15 21:05:52] 2025-04-15 19:05:36,885 | INFO     | [payload] validate_post thread has finished
[2025-04-15 21:05:52] 2025-04-15 19:05:36,890 | INFO     | [payload] validate_pre thread has finished
[2025-04-15 21:05:52] 2025-04-15 19:05:39,918 | INFO     | [data] queue_monitor thread has finished
[2025-04-15 21:05:52] 2025-04-15 19:05:45,041 | INFO     | job.realtimelogging is not enabled
[2025-04-15 21:05:52] 2025-04-15 19:05:46,047 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-15 21:05:52] 2025-04-15 19:05:47,378 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140022881679168)>', '<ExcThread(monitor, started 140022325942016)>']
[2025-04-15 21:05:52] 2025-04-15 19:05:47,457 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-15 21:05:52] 2025-04-15 19:05:47,457 | INFO     | [monitor] control thread has ended
[2025-04-15 21:05:52] 2025-04-15 19:05:52,404 | INFO     | all workflow threads have been joined
[2025-04-15 21:05:52] 2025-04-15 19:05:52,404 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-15 21:05:52] 2025-04-15 19:05:52,404 | INFO     | traces error code: 0
[2025-04-15 21:05:52] 2025-04-15 19:05:52,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-15 21:05:52] 2025-04-15 19:05:52,491 [wrapper] ==== pilot stdout END ====
[2025-04-15 21:05:52] 2025-04-15 19:05:52,493 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-15 21:05:52] 2025-04-15 19:05:52,495 [wrapper] pilotpid: 789442
[2025-04-15 21:05:52] 2025-04-15 19:05:52,497 [wrapper] Pilot exit status: 0
[2025-04-15 21:05:52] 2025-04-15 19:05:52,505 [wrapper] pandaids: 6600289399
[2025-04-15 21:05:52] 2025-04-15 19:05:52,525 [wrapper] cleanup supervisor_pilot  837724 789443
[2025-04-15 21:05:52] 2025-04-15 19:05:52,527 [wrapper] Test setup, not cleaning
[2025-04-15 21:05:52] 2025-04-15 19:05:52,529 [wrapper] apfmon messages muted
[2025-04-15 21:05:52] 2025-04-15 19:05:52,531 [wrapper] ==== wrapper stdout END ====
[2025-04-15 21:05:52] 2025-04-15 19:05:52,532 [wrapper] ==== wrapper stderr END ====
[2025-04-15 21:05:52]  *** Error codes and diagnostics ***
[2025-04-15 21:05:52]     "exeErrorCode": 0,
[2025-04-15 21:05:52]     "exeErrorDiag": "",
[2025-04-15 21:05:52]     "pilotErrorCode": 0,
[2025-04-15 21:05:52]     "pilotErrorDiag": "",
[2025-04-15 21:05:52]  *** Listing of results directory ***
[2025-04-15 21:05:52] total 409580
[2025-04-15 21:05:52] -rw-r--r-- 1 boinc boinc    495897 Apr 11 22:03 pilot3.tar.gz
[2025-04-15 21:05:52] -rwx------ 1 boinc boinc     37140 Apr 11 22:06 runpilot2-wrapper.sh
[2025-04-15 21:05:52] -rw-r--r-- 1 boinc boinc      5111 Apr 11 22:06 queuedata.json
[2025-04-15 21:05:52] -rw-r--r-- 1 boinc boinc       100 Apr 15 19:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-15 21:05:52] -rwxr-xr-x 1 boinc boinc      7986 Apr 15 19:57 run_atlas
[2025-04-15 21:05:52] -rw-r--r-- 1 boinc boinc       105 Apr 15 19:57 job.xml
[2025-04-15 21:05:52] -rw-r--r-- 1 boinc boinc      6259 Apr 15 19:57 init_data.xml
[2025-04-15 21:05:52] -rw-r--r-- 2 boinc boinc 220217326 Apr 15 19:57 EVNT.44075162._000649.pool.root.1
[2025-04-15 21:05:52] -rw-r--r-- 2 boinc boinc     17569 Apr 15 19:57 start_atlas.sh
[2025-04-15 21:05:52] drwxrwx--x 2 boinc boinc        68 Apr 15 19:57 shared
[2025-04-15 21:05:52] -rw-r--r-- 2 boinc boinc    508889 Apr 15 19:57 input.tar.gz
[2025-04-15 21:05:52] -rw-r--r-- 1 boinc boinc         0 Apr 15 19:57 boinc_lockfile
[2025-04-15 21:05:52] -rw-r--r-- 1 boinc boinc      2550 Apr 15 19:57 pandaJob.out
[2025-04-15 21:05:52] -rw------- 1 boinc boinc       124 Apr 15 19:57 setup.sh.local
[2025-04-15 21:05:52] -rw------- 1 boinc boinc    984001 Apr 15 19:57 agis_schedconf.cvmfs.json
[2025-04-15 21:05:52] -rw------- 1 boinc boinc   1603529 Apr 15 19:57 agis_ddmendpoints.agis.ALL.json
[2025-04-15 21:05:52] drwx------ 4 boinc boinc      4096 Apr 15 19:57 pilot3
[2025-04-15 21:05:52] -rw------- 1 boinc boinc        95 Apr 15 21:04 pilot_heartbeat.json
[2025-04-15 21:05:52] -rw------- 1 boinc boinc 193847443 Apr 15 21:04 HITS.44075164._030687.pool.root.1
[2025-04-15 21:05:52] -rw------- 1 boinc boinc      1017 Apr 15 21:05 memory_monitor_summary.json
[2025-04-15 21:05:52] -rw-r--r-- 1 boinc boinc       529 Apr 15 21:05 boinc_task_state.xml
[2025-04-15 21:05:52] -rw------- 1 boinc boinc    361848 Apr 15 21:05 log.44075164._030687.job.log.tgz.1
[2025-04-15 21:05:52] -rw------- 1 boinc boinc      7684 Apr 15 21:05 heartbeat.json
[2025-04-15 21:05:52] -rw-r--r-- 1 boinc boinc      8192 Apr 15 21:05 boinc_mmap_file
[2025-04-15 21:05:52] -rw------- 1 boinc boinc      4735 Apr 15 21:05 pilotlog.txt
[2025-04-15 21:05:52] -rw------- 1 boinc boinc    396333 Apr 15 21:05 log.44075164._030687.job.log.1
[2025-04-15 21:05:52] -rw------- 1 boinc boinc       357 Apr 15 21:05 output.list
[2025-04-15 21:05:52] -rw-r--r-- 1 boinc boinc       620 Apr 15 21:05 runtime_log
[2025-04-15 21:05:52] -rw------- 1 boinc boinc    778240 Apr 15 21:05 result.tar.gz
[2025-04-15 21:05:52] -rw------- 1 boinc boinc       657 Apr 15 21:05 T9aMDmxoZN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmQ7OLDmG6x9Lm.diag
[2025-04-15 21:05:52] -rw-r--r-- 1 boinc boinc      9837 Apr 15 21:05 runtime_log.err
[2025-04-15 21:05:52] -rw-r--r-- 1 boinc boinc        27 Apr 15 21:05 wrapper_checkpoint.txt
[2025-04-15 21:05:52] -rw-r--r-- 1 boinc boinc     21976 Apr 15 21:05 stderr.txt
[2025-04-15 21:05:52] HITS file was successfully produced:
[2025-04-15 21:05:52] -rw------- 1 boinc boinc 193847443 Apr 15 21:04 shared/HITS.pool.root.1
[2025-04-15 21:05:52]  *** Contents of shared directory: ***
[2025-04-15 21:05:52] total 405644
[2025-04-15 21:05:52] -rw-r--r-- 2 boinc boinc 220217326 Apr 15 19:57 ATLAS.root_0
[2025-04-15 21:05:52] -rw-r--r-- 2 boinc boinc     17569 Apr 15 19:57 start_atlas.sh
[2025-04-15 21:05:52] -rw-r--r-- 2 boinc boinc    508889 Apr 15 19:57 input.tar.gz
[2025-04-15 21:05:52] -rw------- 1 boinc boinc 193847443 Apr 15 21:04 HITS.pool.root.1
[2025-04-15 21:05:52] -rw------- 1 boinc boinc    778240 Apr 15 21:05 result.tar.gz
21:05:54 (785678): run_atlas exited; CPU time 44229.731023
21:05:54 (785678): called boinc_finish(0)

</stderr_txt>
]]>

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