Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-14 16:23:38 (221883): Detected: vboxwrapper 26206
2025-04-14 16:23:38 (221883): Detected: BOINC client v8.0.2
2025-04-14 16:23:40 (221883): Detected: VirtualBox VboxManage Interface (Version: 7.1.0)
2025-04-14 16:23:40 (221883): Successfully copied 'init_data.xml' to the shared directory.
2025-04-14 16:23:40 (221883): Create VM. (boinc_5794e73eed44db3e, slot#0)
2025-04-14 16:23:40 (221883): Setting Memory Size for VM. (4300MB)
2025-04-14 16:23:41 (221883): Setting CPU Count for VM. (3)
2025-04-14 16:23:41 (221883): Setting Chipset Options for VM.
2025-04-14 16:23:41 (221883): Setting Graphics Controller Options for VM.
2025-04-14 16:23:41 (221883): Setting Boot Options for VM.
2025-04-14 16:23:41 (221883): Setting Network Configuration for NAT.
2025-04-14 16:23:41 (221883): Enabling VM Network Access.
2025-04-14 16:23:42 (221883): Disabling USB Support for VM.
2025-04-14 16:23:42 (221883): Disabling COM Port Support for VM.
2025-04-14 16:23:42 (221883): Disabling LPT Port Support for VM.
2025-04-14 16:23:42 (221883): Disabling Audio Support for VM.
2025-04-14 16:23:42 (221883): Disabling Clipboard Support for VM.
2025-04-14 16:23:42 (221883): Disabling Drag and Drop Support for VM.
2025-04-14 16:23:42 (221883): Adding storage controller(s) to VM.
2025-04-14 16:23:42 (221883): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-14 16:23:49 (221883): Adding VirtualBox Guest Additions to VM.
2025-04-14 16:23:50 (221883): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-14 16:23:50 (221883): forwarding host port 47383 to guest port 80
2025-04-14 16:23:50 (221883): Enabling remote desktop for VM.
2025-04-14 16:23:50 (221883): Required extension pack not installed, remote desktop not enabled.
2025-04-14 16:23:50 (221883): Enabling shared directory for VM.
2025-04-14 16:23:50 (221883): Starting VM using VBoxManage interface. (boinc_5794e73eed44db3e, slot#0)
2025-04-14 16:23:52 (221883): Successfully started VM. (PID = '222481')
2025-04-14 16:23:52 (221883): Reporting VM Process ID to BOINC.
2025-04-14 16:23:52 (221883): Guest Log: BIOS: VirtualBox 7.1.0
2025-04-14 16:23:52 (221883): Guest Log: CPUID EDX: 0x178bfbff
2025-04-14 16:23:52 (221883): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-14 16:23:52 (221883): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-14 16:23:52 (221883): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-14 16:23:52 (221883): Detected: Web Application Enabled (http://localhost:47383)
2025-04-14 16:23:53 (221883): VM state change detected. (old = 'running', new = 'paused')
2025-04-14 16:24:09 (221883): Preference change detected
2025-04-14 16:24:09 (221883): Setting CPU throttle for VM. (100%)
2025-04-14 16:24:09 (221883): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-14 16:24:10 (221883): VM state change detected. (old = 'paused', new = 'running')
2025-04-14 16:24:11 (221883): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-14 16:24:11 (221883): Guest Log: BIOS: Booting from Hard Disk...
2025-04-14 16:24:14 (221883): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-14 16:24:14 (221883): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-14 16:24:14 (221883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-14 16:24:30 (221883): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-14 16:24:30 (221883): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-14 16:24:49 (221883): VM state change detected. (old = 'running', new = 'paused')
2025-04-14 16:25:10 (221883): VM state change detected. (old = 'paused', new = 'running')
2025-04-14 16:25:36 (221883): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-14 16:25:36 (221883): Guest Log: 00:00:00.000262 main     Log opened 2025-04-14T23:24:55.892468000Z
2025-04-14 16:25:36 (221883): Guest Log: 00:00:00.000396 main     OS Product: Linux
2025-04-14 16:25:36 (221883): Guest Log: 00:00:00.000432 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-14 16:25:36 (221883): Guest Log: 00:00:00.000461 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-14 16:25:36 (221883): Guest Log: 00:00:00.000489 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-14 16:25:36 (221883): Guest Log: 00:00:00.000490 main     Process ID: 1300
2025-04-14 16:25:36 (221883): Guest Log: 00:00:00.000491 main     Package type: LINUX_64BITS_GENERIC
2025-04-14 16:25:36 (221883): Guest Log: 00:00:00.002071 main     5.2.32 r132073 started. Verbose level = 0
2025-04-14 16:25:36 (221883): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-14 16:25:36 (221883): Guest Log: [INFO] Mounting shared directory
2025-04-14 16:25:36 (221883): Guest Log: [INFO] Checking for init_data.xml
2025-04-14 16:25:50 (221883): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-14 16:25:50 (221883): Guest Log: [INFO] Detected branch: prod
2025-04-14 16:25:51 (221883): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-14 16:25:51 (221883): Guest Log: Copying input files
2025-04-14 16:25:52 (221883): Guest Log: Copied input files into RunAtlas.
2025-04-14 16:25:52 (221883): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-14 16:25:52 (221883): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-14 16:25:52 (221883): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-14 16:25:52 (221883): Guest Log: Further information can be found at the LHC@home message board.
2025-04-14 16:26:01 (221883): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-14 16:26:01 (221883): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-14 16:26:01 (221883): Guest Log: 2.6.3.0 1596 0 32356 144868 4 1 3119946 4096000 0 65024 0 0 n/a 1171 1185 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-14 16:26:05 (221883): Guest Log: copied the webapp to /var/www
2025-04-14 16:26:05 (221883): Guest Log: ATHENA_PROC_NUMBER=3
2025-04-14 16:26:05 (221883): Guest Log: ATHENA_CORE_NUMBER=3
2025-04-14 16:26:06 (221883): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-14 16:26:06 (221883): Guest Log:  *** Starting ATLAS job. (PandaID=6602374131 taskID=44075164) ***
2025-04-14 16:30:52 (221883): VM state change detected. (old = 'running', new = 'paused')
2025-04-14 16:31:11 (221883): VM state change detected. (old = 'paused', new = 'running')
2025-04-14 16:51:35 (221883): VM state change detected. (old = 'running', new = 'paused')
2025-04-14 16:51:55 (221883): VM state change detected. (old = 'paused', new = 'running')
2025-04-14 17:00:07 (221883): VM state change detected. (old = 'running', new = 'paused')
2025-04-14 17:00:17 (221883): VM state change detected. (old = 'paused', new = 'running')
2025-04-14 17:01:03 (221883): VM state change detected. (old = 'running', new = 'paused')
2025-04-14 17:01:17 (221883): VM state change detected. (old = 'paused', new = 'running')
2025-04-14 17:27:13 (221883): VM state change detected. (old = 'running', new = 'paused')
2025-04-14 17:27:31 (221883): VM state change detected. (old = 'paused', new = 'running')
2025-04-14 18:04:48 (221883): VM state change detected. (old = 'running', new = 'paused')
2025-04-14 18:05:08 (221883): VM state change detected. (old = 'paused', new = 'running')
2025-04-14 18:05:37 (221883): Status Report: Elapsed Time: '6000.092013'
2025-04-14 18:05:37 (221883): Status Report: CPU Time: '13996.600000'
2025-04-14 18:58:27 (221883): VM state change detected. (old = 'running', new = 'paused')
2025-04-14 18:58:47 (221883): VM state change detected. (old = 'paused', new = 'running')
2025-04-14 19:27:02 (221883): VM state change detected. (old = 'running', new = 'paused')
2025-04-14 19:27:22 (221883): VM state change detected. (old = 'paused', new = 'running')
2025-04-14 19:45:23 (221883): Status Report: Elapsed Time: '12000.092013'
2025-04-14 19:45:23 (221883): Status Report: CPU Time: '31081.800000'
2025-04-14 20:54:12 (221883): Guest Log:  *** Job finished ***
2025-04-14 20:54:12 (221883): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-14 20:54:12 (221883): Guest Log: 2025-04-15 03:51:18,154 | INFO     | [job] create_data_payload thread has finished
2025-04-14 20:54:12 (221883): Guest Log: 2025-04-15 03:51:18,155 | INFO     | [data] copytool_out thread has finished
2025-04-14 20:54:12 (221883): Guest Log: 2025-04-15 03:51:20,360 | INFO     | [data] queue_monitor thread has finished
2025-04-14 20:54:12 (221883): Guest Log: 2025-04-15 03:51:20,632 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139908783560512)>', '<ExcThread(monitor, started 139908316374784)>']
2025-04-14 20:54:12 (221883): Guest Log: 2025-04-15 03:51:21,427 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-14 20:54:12 (221883): Guest Log: 2025-04-15 03:51:21,427 | INFO     | [monitor] control thread has ended
2025-04-14 20:54:12 (221883): Guest Log: 2025-04-15 03:51:25,638 | INFO     | all workflow threads have been joined
2025-04-14 20:54:12 (221883): Guest Log: 2025-04-15 03:51:25,638 | INFO     | end of generic workflow (traces error code: 0)
2025-04-14 20:54:12 (221883): Guest Log: 2025-04-15 03:51:25,638 | INFO     | traces error code: 0
2025-04-14 20:54:12 (221883): Guest Log: 2025-04-15 03:51:25,639 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-14 20:54:12 (221883): Guest Log: 2025-04-15 03:51:25,885 [wrapper] ==== pilot stdout END ====
2025-04-14 20:54:12 (221883): Guest Log: 2025-04-15 03:51:25,891 [wrapper] ==== wrapper stdout RESUME ====
2025-04-14 20:54:12 (221883): Guest Log: 2025-04-15 03:51:25,898 [wrapper] pilotpid: 5907
2025-04-14 20:54:12 (221883): Guest Log: 2025-04-15 03:51:25,906 [wrapper] Pilot exit status: 0
2025-04-14 20:54:12 (221883): Guest Log: 2025-04-15 03:51:26,014 [wrapper] pandaids: 6602374131
2025-04-14 20:54:12 (221883): Guest Log: 2025-04-15 03:51:26,052 [wrapper] cleanup supervisor_pilot 16829 5908
2025-04-14 20:54:12 (221883): Guest Log: 2025-04-15 03:51:26,061 [wrapper] Test setup, not cleaning
2025-04-14 20:54:12 (221883): Guest Log: 2025-04-15 03:51:26,068 [wrapper] apfmon messages muted
2025-04-14 20:54:12 (221883): Guest Log: 2025-04-15 03:51:26,074 [wrapper] ==== wrapper stdout END ====
2025-04-14 20:54:12 (221883): Guest Log: 2025-04-15 03:51:26,082 [wrapper] ==== wrapper stderr END ====
2025-04-14 20:54:12 (221883): Guest Log:  *** Error codes and diagnostics ***
2025-04-14 20:54:13 (221883): Guest Log:     "exeErrorCode": 0,
2025-04-14 20:54:13 (221883): Guest Log:     "exeErrorDiag": "",
2025-04-14 20:54:13 (221883): Guest Log:     "pilotErrorCode": 0,
2025-04-14 20:54:13 (221883): Guest Log:     "pilotErrorDiag": "",
2025-04-14 20:54:13 (221883): Guest Log:  *** Listing of results directory ***
2025-04-14 20:54:13 (221883): Guest Log: total 198252
2025-04-14 20:54:13 (221883): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 14 19:08 queuedata.json
2025-04-14 20:54:13 (221883): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 14 19:09 pilot3.tar.gz
2025-04-14 20:54:13 (221883): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 14 19:11 runpilot2-wrapper.sh
2025-04-14 20:54:13 (221883): Guest Log: -rw-r--r--. 1 atlas atlas    508885 Apr 14 23:25 input.tar.gz
2025-04-14 20:54:13 (221883): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Apr 14 23:25 start_atlas.sh
2025-04-14 20:54:13 (221883): Guest Log: -rw-r--r--. 1 atlas atlas      6473 Apr 14 23:25 init_data.xml
2025-04-14 20:54:13 (221883): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 14 23:25 EVNT.44075162._002065.pool.root.1 -> /data/./ATLAS.root_0
2025-04-14 20:54:13 (221883): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Apr 14 23:25 pandaJob.out
2025-04-14 20:54:13 (221883): Guest Log: -rw-------. 1 atlas atlas       424 Apr 14 23:25 setup.sh.local
2025-04-14 20:54:13 (221883): Guest Log: -rw-------. 1 atlas atlas    986083 Apr 14 23:26 agis_schedconf.cvmfs.json
2025-04-14 20:54:13 (221883): Guest Log: drwx------. 4 atlas atlas      4096 Apr 14 23:26 pilot3
2025-04-14 20:54:13 (221883): Guest Log: -rw-------. 1 atlas atlas 195893752 Apr 15 03:50 HITS.44075164._056930.pool.root.1
2025-04-14 20:54:13 (221883): Guest Log: -rw-------. 1 atlas atlas        95 Apr 15 03:50 pilot_heartbeat.json
2025-04-14 20:54:13 (221883): Guest Log: -rw-------. 1 atlas atlas      1031 Apr 15 03:50 memory_monitor_summary.json
2025-04-14 20:54:13 (221883): Guest Log: -rw-------. 1 atlas atlas   1603529 Apr 15 03:51 agis_ddmendpoints.agis.ALL.json
2025-04-14 20:54:13 (221883): Guest Log: -rw-------. 1 atlas atlas    325202 Apr 15 03:51 log.44075164._056930.job.log.tgz.1
2025-04-14 20:54:13 (221883): Guest Log: -rw-------. 1 atlas atlas      7687 Apr 15 03:51 heartbeat.json
2025-04-14 20:54:13 (221883): Guest Log: -rw-------. 1 atlas atlas      4599 Apr 15 03:51 pilotlog.txt
2025-04-14 20:54:13 (221883): Guest Log: -rw-------. 1 atlas atlas   1350058 Apr 15 03:51 log.44075164._056930.job.log.1
2025-04-14 20:54:13 (221883): Guest Log: -rw-------. 1 atlas atlas       357 Apr 15 03:51 output.list
2025-04-14 20:54:13 (221883): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 15 03:51 runtime_log
2025-04-14 20:54:13 (221883): Guest Log: -rw-------. 1 atlas atlas   1689600 Apr 15 03:51 result.tar.gz
2025-04-14 20:54:13 (221883): Guest Log: -rw-r--r--. 1 atlas atlas     10929 Apr 15 03:51 runtime_log.err
2025-04-14 20:54:13 (221883): Guest Log: -rw-------. 1 atlas atlas       657 Apr 15 03:51 PTzKDmnOeO7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmFd0KDm0srjRn.diag
2025-04-14 20:54:13 (221883): Guest Log: Looking for outputfile HITS.44075164._056930.pool.root.1
2025-04-14 20:54:13 (221883): Guest Log: HITS file was successfully produced
2025-04-14 20:54:13 (221883): Guest Log: -rw-------. 1 atlas atlas 195893752 Apr 15 03:50 /home/atlas/RunAtlas/HITS.44075164._056930.pool.root.1
2025-04-14 20:54:13 (221883): Guest Log: Successfully finished the ATLAS job!
2025-04-14 20:54:13 (221883): Guest Log: Copying the results back to the shared directory!
2025-04-14 20:54:13 (221883): Guest Log:  *** Contents of shared directory: ***
2025-04-14 20:54:13 (221883): Guest Log: total 219072
2025-04-14 20:54:13 (221883): Guest Log: -rw-r--r--. 1 root root 222093122 Apr 14 23:23 ATLAS.root_0
2025-04-14 20:54:13 (221883): Guest Log: -rw-r--r--. 1 root root      6473 Apr 14 23:23 init_data.xml
2025-04-14 20:54:13 (221883): Guest Log: -rw-r--r--. 1 root root    508885 Apr 14 23:23 input.tar.gz
2025-04-14 20:54:13 (221883): Guest Log: -rw-r--r--. 1 root root   1689600 Apr 15  2025 result.tar.gz
2025-04-14 20:54:13 (221883): Guest Log: -rw-r--r--. 1 root root     17569 Apr 14 23:23 start_atlas.sh
2025-04-14 20:54:13 (221883): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-14 20:54:14 (221883): VM Completion File Detected.
2025-04-14 20:54:14 (221883): Powering off VM.
2025-04-14 20:54:18 (221883): Successfully stopped VM.
2025-04-14 20:54:18 (221883): Deregistering VM. (boinc_5794e73eed44db3e, slot#0)
2025-04-14 20:54:18 (221883): Removing network bandwidth throttle group from VM.
2025-04-14 20:54:19 (221883): Removing VM from VirtualBox.
20:54:25 (221883): called boinc_finish(0)

</stderr_txt>
]]>

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