Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
18:31:15 (868793): wrapper (7.7.26015): starting
18:31:15 (868793): wrapper: running run_atlas (--nthreads 12)
[2025-04-16 18:31:15] Arguments: --nthreads 12
[2025-04-16 18:31:15] Threads: 12
[2025-04-16 18:31:15] Checking for CVMFS
[2025-04-16 18:31:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 18:31:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 18:31:16] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 18:31:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 18:31:16] 2.12.7.0 1725662 13506 67180 144932 3 56 2682441 4096000 0 130560 1 8939827 99.990 2941606 187 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-04-16 18:31:16] CVMFS is ok
[2025-04-16 18:31:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 18:31:16] Checking for apptainer binary...
[2025-04-16 18:31:16] apptainer is not installed, using version from CVMFS
[2025-04-16 18:31:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 18:31:16] lithium
[2025-04-16 18:31:16] apptainer works
[2025-04-16 18:31:16] Set ATHENA_PROC_NUMBER=12
[2025-04-16 18:31:16] Set ATHENA_CORE_NUMBER=12
[2025-04-16 18:31:16] Starting ATLAS job with PandaID=6602123896
[2025-04-16 18:31:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 20:11:58]  *** The last 200 lines of the pilot log: ***
[2025-04-16 20:11:58] 2025-04-16 18:10:54,836 | INFO     | monitor loop #481: job 0:6602123896 is in state 'finished'
[2025-04-16 20:11:58] 2025-04-16 18:10:54,836 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 20:11:58] 2025-04-16 18:10:57,337 | INFO     | monitor loop #482: job 0:6602123896 is in state 'finished'
[2025-04-16 20:11:58] 2025-04-16 18:10:57,337 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 20:11:58] 2025-04-16 18:10:59,842 | INFO     | monitor loop #483: job 0:6602123896 is in state 'finished'
[2025-04-16 20:11:58] 2025-04-16 18:10:59,842 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 20:11:58] 2025-04-16 18:11:02,346 | INFO     | monitor loop #484: job 0:6602123896 is in state 'finished'
[2025-04-16 20:11:58] 2025-04-16 18:11:02,346 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 20:11:58] 2025-04-16 18:11:04,850 | INFO     | monitor loop #485: job 0:6602123896 is in state 'finished'
[2025-04-16 20:11:58] 2025-04-16 18:11:04,850 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 20:11:58] 2025-04-16 18:11:07,353 | INFO     | monitor loop #486: job 0:6602123896 is in state 'finished'
[2025-04-16 20:11:58] 2025-04-16 18:11:07,353 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 20:11:58] 2025-04-16 18:11:09,857 | INFO     | monitor loop #487: job 0:6602123896 is in state 'finished'
[2025-04-16 20:11:58] 2025-04-16 18:11:09,857 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 20:11:58] 2025-04-16 18:11:12,361 | INFO     | monitor loop #488: job 0:6602123896 is in state 'finished'
[2025-04-16 20:11:58] 2025-04-16 18:11:12,361 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 20:11:58] 2025-04-16 18:11:14,865 | INFO     | monitor loop #489: job 0:6602123896 is in state 'finished'
[2025-04-16 20:11:58] 2025-04-16 18:11:14,865 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 20:11:58] 2025-04-16 18:11:15,799 | INFO     | PID=872527 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-16 20:11:58] 2025-04-16 18:11:17,368 | INFO     | monitor loop #490: job 0:6602123896 is in state 'finished'
[2025-04-16 20:11:58] 2025-04-16 18:11:17,368 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 20:11:58] 2025-04-16 18:11:19,872 | INFO     | monitor loop #491: job 0:6602123896 is in state 'finished'
[2025-04-16 20:11:58] 2025-04-16 18:11:19,872 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 20:11:58] 2025-04-16 18:11:22,376 | INFO     | monitor loop #492: job 0:6602123896 is in state 'finished'
[2025-04-16 20:11:58] 2025-04-16 18:11:22,376 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 20:11:58] 2025-04-16 18:11:24,880 | INFO     | monitor loop #493: job 0:6602123896 is in state 'finished'
[2025-04-16 20:11:58] 2025-04-16 18:11:24,880 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 20:11:58] 2025-04-16 18:11:27,384 | INFO     | monitor loop #494: job 0:6602123896 is in state 'finished'
[2025-04-16 20:11:58] 2025-04-16 18:11:27,384 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 20:11:58] 2025-04-16 18:11:29,888 | INFO     | monitor loop #495: job 0:6602123896 is in state 'finished'
[2025-04-16 20:11:58] 2025-04-16 18:11:29,888 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 20:11:58] 2025-04-16 18:11:32,392 | INFO     | monitor loop #496: job 0:6602123896 is in state 'finished'
[2025-04-16 20:11:58] 2025-04-16 18:11:32,392 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 20:11:58] 2025-04-16 18:11:34,896 | INFO     | monitor loop #497: job 0:6602123896 is in state 'finished'
[2025-04-16 20:11:58] 2025-04-16 18:11:34,896 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 20:11:58] 2025-04-16 18:11:37,397 | INFO     | monitor loop #498: job 0:6602123896 is in state 'finished'
[2025-04-16 20:11:58] 2025-04-16 18:11:37,397 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 20:11:58] 2025-04-16 18:11:37,534 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-16 20:11:58] 2025-04-16 18:11:37,534 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6602123896/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 20:11:58] 2025-04-16 18:11:37,534 | INFO     | extracted standard info from prmon json
[2025-04-16 20:11:58] 2025-04-16 18:11:37,535 | INFO     | extracted standard memory fields from prmon json
[2025-04-16 20:11:58] 2025-04-16 18:11:37,535 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-16 20:11:58] 2025-04-16 18:11:37,536 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-16 20:11:58] 2025-04-16 18:11:37,536 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-16 20:11:58] 2025-04-16 18:11:37,538 | INFO     | fitting pss+swap vs Time
[2025-04-16 20:11:58] 2025-04-16 18:11:37,538 | INFO     | sum of square deviations: 211285822.0
[2025-04-16 20:11:58] 2025-04-16 18:11:37,538 | INFO     | sum of deviations: 4615851822.0
[2025-04-16 20:11:58] 2025-04-16 18:11:37,538 | INFO     | mean x: 1744824067.5
[2025-04-16 20:11:58] 2025-04-16 18:11:37,538 | INFO     | mean y: 2768977.7045454546
[2025-04-16 20:11:58] 2025-04-16 18:11:37,539 | INFO     | -- intersect: -38115497902.689
[2025-04-16 20:11:58] 2025-04-16 18:11:37,539 | INFO     | intersect: -38115497902.689
[2025-04-16 20:11:58] 2025-04-16 18:11:37,539 | INFO     | chi2: 1.7894404268217263
[2025-04-16 20:11:58] 2025-04-16 18:11:37,539 | INFO     | -- intersect: -38115497902.689
[2025-04-16 20:11:58] 2025-04-16 18:11:37,539 | INFO     | current memory leak: 21.85 B/s (using 88 data points, chi2=1.79)
[2025-04-16 20:11:58] 2025-04-16 18:11:37,540 | INFO     | ..............................
[2025-04-16 20:11:58] 2025-04-16 18:11:37,540 | INFO     | . Timing measurements:
[2025-04-16 20:11:58] 2025-04-16 18:11:37,540 | INFO     | . get job = 0 s
[2025-04-16 20:11:58] 2025-04-16 18:11:37,540 | INFO     | . initial setup = 1 s
[2025-04-16 20:11:58] 2025-04-16 18:11:37,540 | INFO     | . payload setup = 7 s
[2025-04-16 20:11:58] 2025-04-16 18:11:37,540 | INFO     | . stage-in = 0 s
[2025-04-16 20:11:58] 2025-04-16 18:11:37,540 | INFO     | . payload execution = 5768 s
[2025-04-16 20:11:58] 2025-04-16 18:11:37,540 | INFO     | . stage-out = 0 s
[2025-04-16 20:11:58] 2025-04-16 18:11:37,540 | INFO     | . log creation = 0 s
[2025-04-16 20:11:58] 2025-04-16 18:11:37,541 | INFO     | ..............................
[2025-04-16 20:11:58] 2025-04-16 18:11:37,958 | INFO     | PID=872527 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-16 20:11:58] 2025-04-16 18:11:38,058 | INFO     | 
[2025-04-16 20:11:58] 2025-04-16 18:11:38,058 | INFO     | job summary report
[2025-04-16 20:11:58] 2025-04-16 18:11:38,058 | INFO     | --------------------------------------------------
[2025-04-16 20:11:58] 2025-04-16 18:11:38,058 | INFO     | PanDA job id: 6602123896
[2025-04-16 20:11:58] 2025-04-16 18:11:38,058 | INFO     | task id: 44075483
[2025-04-16 20:11:58] 2025-04-16 18:11:38,059 | INFO     | errors: (none)
[2025-04-16 20:11:58] 2025-04-16 18:11:38,059 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 20:11:58] 2025-04-16 18:11:38,059 | INFO     | pilot state: finished 
[2025-04-16 20:11:58] 2025-04-16 18:11:38,059 | INFO     | transexitcode: 0
[2025-04-16 20:11:58] 2025-04-16 18:11:38,059 | INFO     | exeerrorcode: 0
[2025-04-16 20:11:58] 2025-04-16 18:11:38,059 | INFO     | exeerrordiag: 
[2025-04-16 20:11:58] 2025-04-16 18:11:38,059 | INFO     | exitcode: 0
[2025-04-16 20:11:58] 2025-04-16 18:11:38,059 | INFO     | exitmsg: OK
[2025-04-16 20:11:58] 2025-04-16 18:11:38,059 | INFO     | cpuconsumptiontime: 58603 s
[2025-04-16 20:11:58] 2025-04-16 18:11:38,059 | INFO     | nevents: 400
[2025-04-16 20:11:58] 2025-04-16 18:11:38,059 | INFO     | neventsw: 0
[2025-04-16 20:11:58] 2025-04-16 18:11:38,060 | INFO     | pid: 879121
[2025-04-16 20:11:58] 2025-04-16 18:11:38,060 | INFO     | pgrp: 879121
[2025-04-16 20:11:58] 2025-04-16 18:11:38,060 | INFO     | corecount: 12
[2025-04-16 20:11:58] 2025-04-16 18:11:38,060 | INFO     | event service: False
[2025-04-16 20:11:58] 2025-04-16 18:11:38,060 | INFO     | sizes: {0: 2417370, 4: 2417576, 11: 2417604, 5779: 2444159, 5780: 2453114, 5782: 2453170, 5999: 2453468}
[2025-04-16 20:11:58] 2025-04-16 18:11:38,060 | INFO     | --------------------------------------------------
[2025-04-16 20:11:58] 2025-04-16 18:11:38,060 | INFO     | 
[2025-04-16 20:11:58] 2025-04-16 18:11:38,060 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-04-16 20:11:58] 2025-04-16 18:11:38,078 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 20:11:58] 2025-04-16 18:11:38,078 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 20:11:58] 2025-04-16 18:11:38,078 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 20:11:58] 2025-04-16 18:11:38,078 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 20:11:58] 2025-04-16 18:11:38,078 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 20:11:58] 2025-04-16 18:11:38,078 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 20:11:58] 2025-04-16 18:11:38,079 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 20:11:58] 2025-04-16 18:11:38,079 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 20:11:58] 2025-04-16 18:11:38,079 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 20:11:58] 2025-04-16 18:11:38,079 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 20:11:58] 2025-04-16 18:11:38,079 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 20:11:58] 2025-04-16 18:11:38,079 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 20:11:58] 2025-04-16 18:11:38,079 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 20:11:58] 2025-04-16 18:11:38,079 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 20:11:58] 2025-04-16 18:11:38,079 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 20:11:58] 2025-04-16 18:11:38,080 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 20:11:58] 2025-04-16 18:11:38,080 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 20:11:58] 2025-04-16 18:11:38,080 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 20:11:58] 2025-04-16 18:11:38,080 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 20:11:58] 2025-04-16 18:11:38,080 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 20:11:58] 2025-04-16 18:11:38,080 | INFO     | job 6602123896 has completed (purged errors)
[2025-04-16 20:11:58] 2025-04-16 18:11:38,080 | INFO     | overall cleanup function is called
[2025-04-16 20:11:58] 2025-04-16 18:11:39,088 | INFO     | --- collectZombieJob: --- 10, [879121]
[2025-04-16 20:11:58] 2025-04-16 18:11:39,088 | INFO     | zombie collector waiting for pid 879121
[2025-04-16 20:11:58] 2025-04-16 18:11:39,088 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 20:11:58] 2025-04-16 18:11:39,088 | INFO     | collected zombie processes
[2025-04-16 20:11:58] 2025-04-16 18:11:39,088 | INFO     | will attempt to kill all subprocesses of pid=879121
[2025-04-16 20:11:58] 2025-04-16 18:11:39,167 | INFO     | process IDs to be killed: [879121] (in reverse order)
[2025-04-16 20:11:58] 2025-04-16 18:11:39,209 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 20:11:58] 2025-04-16 18:11:39,210 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 20:11:58] 2025-04-16 18:11:39,212 | INFO     | did not find any defunct processes belonging to 879121
[2025-04-16 20:11:58] 2025-04-16 18:11:39,215 | INFO     | did not find any defunct processes belonging to 879121
[2025-04-16 20:11:58] 2025-04-16 18:11:39,215 | INFO     | ready for new job
[2025-04-16 20:11:58] 2025-04-16 18:11:39,215 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 20:11:58] 2025-04-16 18:11:39,217 | INFO     | **************************************
[2025-04-16 20:11:58] 2025-04-16 18:11:39,217 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 20:11:58] 2025-04-16 18:11:39,217 | INFO     | **************************************
[2025-04-16 20:11:58] 2025-04-16 18:11:39,217 | INFO     | 
[2025-04-16 20:11:58] 2025-04-16 18:11:39,239 | INFO     | architecture information:
[2025-04-16 20:11:58] 2025-04-16 18:11:39,239 | INFO     | executing command: cat /etc/os-release
[2025-04-16 20:11:58] 2025-04-16 18:11:39,250 | INFO     | cat /etc/os-release:
[2025-04-16 20:11:58] NAME="CentOS Linux"
[2025-04-16 20:11:58] VERSION="7 (Core)"
[2025-04-16 20:11:58] ID="centos"
[2025-04-16 20:11:58] ID_LIKE="rhel fedora"
[2025-04-16 20:11:58] VERSION_ID="7"
[2025-04-16 20:11:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 20:11:58] ANSI_COLOR="0;31"
[2025-04-16 20:11:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 20:11:58] HOME_URL="https://www.centos.org/"
[2025-04-16 20:11:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 20:11:58] 
[2025-04-16 20:11:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 20:11:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 20:11:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 20:11:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 20:11:58] 
[2025-04-16 20:11:58] 2025-04-16 18:11:39,250 | INFO     | **************************************
[2025-04-16 20:11:58] 2025-04-16 18:11:39,753 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-04-16 20:11:58] 2025-04-16 18:11:39,767 | INFO     | sufficient remaining disk space (32032948224 B)
[2025-04-16 20:11:58] 2025-04-16 18:11:39,767 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 20:11:58] 2025-04-16 18:11:39,767 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 20:11:58] 2025-04-16 18:11:39,767 | INFO     | update_server=False
[2025-04-16 20:11:58] 2025-04-16 18:11:39,767 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 20:11:58] 2025-04-16 18:11:39,768 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 20:11:58] 2025-04-16 18:11:39,768 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 20:11:58] 2025-04-16 18:11:39,901 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-16 20:11:58] 2025-04-16 18:11:39,901 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-16 20:11:58] 2025-04-16 18:11:39,901 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 20:11:58] 2025-04-16 18:11:39,901 | INFO     | will abort loop
[2025-04-16 20:11:58] 2025-04-16 18:11:39,964 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 20:11:58] 2025-04-16 18:11:39,964 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 20:11:58] 2025-04-16 18:11:39,964 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 20:11:58] 2025-04-16 18:11:40,031 | INFO     | all job control threads have been joined
[2025-04-16 20:11:58] 2025-04-16 18:11:40,095 | INFO     | all payload control threads have been joined
[2025-04-16 20:11:58] 2025-04-16 18:11:40,773 | INFO     | [job] retrieve thread has finished
[2025-04-16 20:11:58] 2025-04-16 18:11:40,837 | INFO     | all data control threads have been joined
[2025-04-16 20:11:58] 2025-04-16 18:11:40,898 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 20:11:58] 2025-04-16 18:11:40,907 | INFO     | [job] job monitor thread has finished
[2025-04-16 20:11:58] 2025-04-16 18:11:41,037 | INFO     | [job] control thread has finished
[2025-04-16 20:11:58] 2025-04-16 18:11:41,047 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 20:11:58] 2025-04-16 18:11:41,101 | INFO     | [payload] control thread has finished
[2025-04-16 20:11:58] 2025-04-16 18:11:41,435 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 20:11:58] 2025-04-16 18:11:41,560 | INFO     | [data] copytool_in thread has finished
[2025-04-16 20:11:58] 2025-04-16 18:11:41,577 | INFO     | [payload] failed_post thread has finished
[2025-04-16 20:11:58] 2025-04-16 18:11:41,774 | INFO     | [data] copytool_out thread has finished
[2025-04-16 20:11:58] 2025-04-16 18:11:41,841 | INFO     | [data] control thread has finished
[2025-04-16 20:11:58] 2025-04-16 18:11:42,011 | INFO     | [payload] validate_post thread has finished
[2025-04-16 20:11:58] 2025-04-16 18:11:42,253 | INFO     | [job] validate thread has finished
[2025-04-16 20:11:58] 2025-04-16 18:11:42,635 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 20:11:58] 2025-04-16 18:11:43,640 | INFO     | [job] queue monitor thread has finished
[2025-04-16 20:11:58] 2025-04-16 18:11:43,774 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 20:11:58] 2025-04-16 18:11:50,287 | INFO     | job.realtimelogging is not enabled
[2025-04-16 20:11:58] 2025-04-16 18:11:51,292 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 20:11:58] 2025-04-16 18:11:52,892 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140541710763840)>', '<ExcThread(monitor, started 140541027137280)>']
[2025-04-16 20:11:58] 2025-04-16 18:11:53,030 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 20:11:58] 2025-04-16 18:11:53,031 | INFO     | [monitor] control thread has ended
[2025-04-16 20:11:58] 2025-04-16 18:11:57,918 | INFO     | all workflow threads have been joined
[2025-04-16 20:11:58] 2025-04-16 18:11:57,918 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 20:11:58] 2025-04-16 18:11:57,918 | INFO     | traces error code: 0
[2025-04-16 20:11:58] 2025-04-16 18:11:57,918 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 20:11:58] 2025-04-16 18:11:58,018 [wrapper] ==== pilot stdout END ====
[2025-04-16 20:11:58] 2025-04-16 18:11:58,021 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 20:11:58] 2025-04-16 18:11:58,023 [wrapper] pilotpid: 872527
[2025-04-16 20:11:58] 2025-04-16 18:11:58,025 [wrapper] Pilot exit status: 0
[2025-04-16 20:11:58] 2025-04-16 18:11:58,034 [wrapper] pandaids: 6602123896
[2025-04-16 20:11:58] 2025-04-16 18:11:58,060 [wrapper] cleanup supervisor_pilot  890817 872528
[2025-04-16 20:11:58] 2025-04-16 18:11:58,062 [wrapper] Test setup, not cleaning
[2025-04-16 20:11:58] 2025-04-16 18:11:58,065 [wrapper] apfmon messages muted
[2025-04-16 20:11:58] 2025-04-16 18:11:58,067 [wrapper] ==== wrapper stdout END ====
[2025-04-16 20:11:58] 2025-04-16 18:11:58,069 [wrapper] ==== wrapper stderr END ====
[2025-04-16 20:11:58]  *** Error codes and diagnostics ***
[2025-04-16 20:11:58]     "exeErrorCode": 0,
[2025-04-16 20:11:58]     "exeErrorDiag": "",
[2025-04-16 20:11:58]     "pilotErrorCode": 0,
[2025-04-16 20:11:58]     "pilotErrorDiag": "",
[2025-04-16 20:11:58]  *** Listing of results directory ***
[2025-04-16 20:11:58] total 402388
[2025-04-16 20:11:58] -rw-r--r-- 1 boinc boinc    495897 Apr 14 10:28 pilot3.tar.gz
[2025-04-16 20:11:58] -rwx------ 1 boinc boinc     37140 Apr 14 10:31 runpilot2-wrapper.sh
[2025-04-16 20:11:58] -rw-r--r-- 1 boinc boinc      5111 Apr 14 10:31 queuedata.json
[2025-04-16 20:11:58] -rw-r--r-- 1 boinc boinc       100 Apr 16 18:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 20:11:58] -rwxr-xr-x 1 boinc boinc      7986 Apr 16 18:31 run_atlas
[2025-04-16 20:11:58] -rw-r--r-- 1 boinc boinc       105 Apr 16 18:31 job.xml
[2025-04-16 20:11:58] -rw-r--r-- 2 boinc boinc     17569 Apr 16 18:31 start_atlas.sh
[2025-04-16 20:11:58] drwxrwx--x 2 boinc boinc      4096 Apr 16 18:31 shared
[2025-04-16 20:11:58] -rw-r--r-- 2 boinc boinc    508887 Apr 16 18:31 input.tar.gz
[2025-04-16 20:11:58] -rw-r--r-- 1 boinc boinc      5970 Apr 16 18:31 init_data.xml
[2025-04-16 20:11:58] -rw-r--r-- 2 boinc boinc 221600712 Apr 16 18:31 EVNT.44075481._000582.pool.root.1
[2025-04-16 20:11:58] -rw-r--r-- 1 boinc boinc         0 Apr 16 18:31 boinc_lockfile
[2025-04-16 20:11:58] -rw-r--r-- 1 boinc boinc      2577 Apr 16 18:31 pandaJob.out
[2025-04-16 20:11:58] -rw------- 1 boinc boinc       424 Apr 16 18:31 setup.sh.local
[2025-04-16 20:11:58] -rw------- 1 boinc boinc    986568 Apr 16 18:31 agis_schedconf.cvmfs.json
[2025-04-16 20:11:58] -rw------- 1 boinc boinc   1603529 Apr 16 18:31 agis_ddmendpoints.agis.ALL.json
[2025-04-16 20:11:58] drwx------ 4 boinc boinc      4096 Apr 16 18:31 pilot3
[2025-04-16 20:11:58] -rw------- 1 boinc boinc 184733784 Apr 16 20:07 HITS.44075483._014759.pool.root.1
[2025-04-16 20:11:58] -rw-r--r-- 1 boinc boinc       529 Apr 16 20:07 boinc_task_state.xml
[2025-04-16 20:11:58] -rw------- 1 boinc boinc      1060 Apr 16 20:07 memory_monitor_summary.json
[2025-04-16 20:11:58] -rw------- 1 boinc boinc    384240 Apr 16 20:07 log.44075483._014759.job.log.tgz.1
[2025-04-16 20:11:58] -rw------- 1 boinc boinc        95 Apr 16 20:11 pilot_heartbeat.json
[2025-04-16 20:11:58] -rw------- 1 boinc boinc      7733 Apr 16 20:11 heartbeat.json
[2025-04-16 20:11:58] -rw-r--r-- 1 boinc boinc      8192 Apr 16 20:11 boinc_mmap_file
[2025-04-16 20:11:58] -rw-r--r-- 1 boinc boinc        27 Apr 16 20:11 wrapper_checkpoint.txt
[2025-04-16 20:11:58] -rw------- 1 boinc boinc      4618 Apr 16 20:11 pilotlog.txt
[2025-04-16 20:11:58] -rw------- 1 boinc boinc    547765 Apr 16 20:11 log.44075483._014759.job.log.1
[2025-04-16 20:11:58] -rw------- 1 boinc boinc       357 Apr 16 20:11 output.list
[2025-04-16 20:11:58] -rw-r--r-- 1 boinc boinc       620 Apr 16 20:11 runtime_log
[2025-04-16 20:11:58] -rw------- 1 boinc boinc    952320 Apr 16 20:11 result.tar.gz
[2025-04-16 20:11:58] -rw-r--r-- 1 boinc boinc     11098 Apr 16 20:11 runtime_log.err
[2025-04-16 20:11:58] -rw------- 1 boinc boinc       652 Apr 16 20:11 mNMNDmsOUO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmNrVLDmJCbgIn.diag
[2025-04-16 20:11:58] -rw-r--r-- 1 boinc boinc     22136 Apr 16 20:11 stderr.txt
[2025-04-16 20:11:58] HITS file was successfully produced:
[2025-04-16 20:11:58] -rw------- 1 boinc boinc 184733784 Apr 16 20:07 shared/HITS.pool.root.1
[2025-04-16 20:11:58]  *** Contents of shared directory: ***
[2025-04-16 20:11:58] total 398276
[2025-04-16 20:11:58] -rw-r--r-- 2 boinc boinc     17569 Apr 16 18:31 start_atlas.sh
[2025-04-16 20:11:58] -rw-r--r-- 2 boinc boinc    508887 Apr 16 18:31 input.tar.gz
[2025-04-16 20:11:58] -rw-r--r-- 2 boinc boinc 221600712 Apr 16 18:31 ATLAS.root_0
[2025-04-16 20:11:58] -rw------- 1 boinc boinc 184733784 Apr 16 20:07 HITS.pool.root.1
[2025-04-16 20:11:58] -rw------- 1 boinc boinc    952320 Apr 16 20:11 result.tar.gz
20:11:59 (868793): run_atlas exited; CPU time 58532.787700
20:11:59 (868793): called boinc_finish(0)

</stderr_txt>
]]>

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