Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:56:06 (265411): wrapper (7.7.26015): starting
16:56:06 (265411): wrapper: running run_atlas (--nthreads 8)
[2025-04-14 16:56:06] Arguments: --nthreads 8
[2025-04-14 16:56:06] Threads: 8
[2025-04-14 16:56:06] Checking for CVMFS
[2025-04-14 16:56:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-14 16:56:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-14 16:56:08] Running cvmfs_config stat atlas.cern.ch
[2025-04-14 16:56:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-14 16:56:09] 2.12.6.0 2301809 65930 239164 144862 3 157 19805677 32935937 24908 130560 0 39502581 99.692 34287629 8319 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-14 16:56:09] CVMFS is ok
[2025-04-14 16:56:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-14 16:56:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-14 16:56:10] Further information can be found at the LHC@home message board.
[2025-04-14 16:56:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-14 16:56:10] Checking for apptainer binary...
[2025-04-14 16:56:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-14 16:56:10] Running /usr/bin/apptainer --version
[2025-04-14 16:56:10] apptainer version 1.4.0-1.el9
[2025-04-14 16:56:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-14 16:56:12] c6-12-25-2.aglt2.org
[2025-04-14 16:56:12] apptainer works
[2025-04-14 16:56:12] Set ATHENA_PROC_NUMBER=8
[2025-04-14 16:56:12] Set ATHENA_CORE_NUMBER=8
[2025-04-14 16:56:12] Starting ATLAS job with PandaID=6602132650
[2025-04-14 16:56:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-15 11:23:12]  *** The last 200 lines of the pilot log: ***
[2025-04-15 11:23:12] 2025-04-15 15:22:23,804 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 11:23:12] 2025-04-15 15:22:26,320 | INFO     | monitor loop #2207: job 0:6602132650 is in state 'finished'
[2025-04-15 11:23:12] 2025-04-15 15:22:26,320 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 11:23:12] 2025-04-15 15:22:28,872 | INFO     | monitor loop #2208: job 0:6602132650 is in state 'finished'
[2025-04-15 11:23:12] 2025-04-15 15:22:28,879 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 11:23:12] 2025-04-15 15:22:31,388 | INFO     | monitor loop #2209: job 0:6602132650 is in state 'finished'
[2025-04-15 11:23:12] 2025-04-15 15:22:31,388 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 11:23:12] 2025-04-15 15:22:33,972 | INFO     | monitor loop #2210: job 0:6602132650 is in state 'finished'
[2025-04-15 11:23:12] 2025-04-15 15:22:33,972 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 11:23:12] 2025-04-15 15:22:36,742 | INFO     | monitor loop #2211: job 0:6602132650 is in state 'finished'
[2025-04-15 11:23:12] 2025-04-15 15:22:36,742 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 11:23:12] 2025-04-15 15:22:37,406 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-15 11:23:12] 2025-04-15 15:22:37,407 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6602132650/memory_monitor_summary.json (trf name=prmon)
[2025-04-15 11:23:12] 2025-04-15 15:22:37,413 | INFO     | extracted standard info from prmon json
[2025-04-15 11:23:12] 2025-04-15 15:22:37,413 | INFO     | extracted standard memory fields from prmon json
[2025-04-15 11:23:12] 2025-04-15 15:22:37,413 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-15 11:23:12] 2025-04-15 15:22:37,415 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-15 11:23:12] 2025-04-15 15:22:37,415 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-15 11:23:12] 2025-04-15 15:22:37,732 | INFO     | fitting pss+swap vs Time
[2025-04-15 11:23:12] 2025-04-15 15:22:37,800 | INFO     | sum of square deviations: 391707917545.15765
[2025-04-15 11:23:12] 2025-04-15 15:22:38,540 | INFO     | PID=272201 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-15 11:23:12] 2025-04-15 15:22:38,541 | INFO     | .. there are 25 such processes running
[2025-04-15 11:23:12] 2025-04-15 15:22:38,779 | INFO     | sum of deviations: 958130083837.8076
[2025-04-15 11:23:12] 2025-04-15 15:22:38,779 | INFO     | mean x: 1744697475.398705
[2025-04-15 11:23:12] 2025-04-15 15:22:38,780 | INFO     | mean y: 2380616.578168363
[2025-04-15 11:23:12] 2025-04-15 15:22:38,780 | INFO     | -- intersect: -4265205162.2634306
[2025-04-15 11:23:12] 2025-04-15 15:22:38,780 | INFO     | intersect: -4265205162.2634306
[2025-04-15 11:23:12] 2025-04-15 15:22:38,801 | INFO     | chi2: 17.24629942307848
[2025-04-15 11:23:12] 2025-04-15 15:22:38,812 | INFO     | sum of square deviations: 386298476133.0742
[2025-04-15 11:23:12] 2025-04-15 15:22:39,116 | INFO     | sum of deviations: 1300484321354.6074
[2025-04-15 11:23:12] 2025-04-15 15:22:39,117 | INFO     | mean x: 1744697322.908922
[2025-04-15 11:23:12] 2025-04-15 15:22:39,118 | INFO     | mean y: 2390266.342936803
[2025-04-15 11:23:12] 2025-04-15 15:22:39,118 | INFO     | -- intersect: -5871180700.503924
[2025-04-15 11:23:12] 2025-04-15 15:22:39,118 | INFO     | intersect: -5871180700.503924
[2025-04-15 11:23:12] 2025-04-15 15:22:39,130 | INFO     | chi2: 13.319446894661535
[2025-04-15 11:23:12] 2025-04-15 15:22:39,144 | INFO     | current chi2=13.319446894661535 (change=22.7692470835926 %)
[2025-04-15 11:23:12] 2025-04-15 15:22:39,144 | INFO     | right removable region: 1075
[2025-04-15 11:23:12] 2025-04-15 15:22:39,164 | INFO     | sum of square deviations: 386297157564.7064
[2025-04-15 11:23:12] 2025-04-15 15:22:39,297 | INFO     | monitor loop #2212: job 0:6602132650 is in state 'finished'
[2025-04-15 11:23:12] 2025-04-15 15:22:39,298 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 11:23:12] 2025-04-15 15:22:39,722 | INFO     | sum of deviations: 630656231624.0226
[2025-04-15 11:23:12] 2025-04-15 15:22:39,723 | INFO     | mean x: 1744697627.9070632
[2025-04-15 11:23:12] 2025-04-15 15:22:39,723 | INFO     | mean y: 2389843.2602230483
[2025-04-15 11:23:12] 2025-04-15 15:22:39,723 | INFO     | -- intersect: -2845947012.945958
[2025-04-15 11:23:12] 2025-04-15 15:22:39,723 | INFO     | intersect: -2845947012.945958
[2025-04-15 11:23:12] 2025-04-15 15:22:39,739 | INFO     | chi2: 13.62121919670567
[2025-04-15 11:23:12] 2025-04-15 15:22:39,740 | INFO     | current chi2=13.62121919670567 (change=21.019467060405063 %)
[2025-04-15 11:23:12] 2025-04-15 15:22:39,740 | INFO     | left removable region: 10
[2025-04-15 11:23:12] 2025-04-15 15:22:39,763 | INFO     | sum of square deviations: 374570984472.61005
[2025-04-15 11:23:12] 2025-04-15 15:22:40,062 | INFO     | sum of deviations: 820021298849.6216
[2025-04-15 11:23:12] 2025-04-15 15:22:40,063 | INFO     | mean x: 1744697597.4272301
[2025-04-15 11:23:12] 2025-04-15 15:22:40,064 | INFO     | mean y: 2407755.233802817
[2025-04-15 11:23:12] 2025-04-15 15:22:40,064 | INFO     | -- intersect: -3817133130.8721485
[2025-04-15 11:23:12] 2025-04-15 15:22:40,064 | INFO     | intersect: -3817133130.8721485
[2025-04-15 11:23:12] 2025-04-15 15:22:40,087 | INFO     | chi2: 7.388559977413628
[2025-04-15 11:23:12] 2025-04-15 15:22:40,088 | INFO     | -- intersect: -3817133130.8721485
[2025-04-15 11:23:12] 2025-04-15 15:22:40,088 | INFO     | current memory leak: 2.19 B/s (using 1065 data points, chi2=7.39)
[2025-04-15 11:23:12] 2025-04-15 15:22:40,117 | INFO     | ..............................
[2025-04-15 11:23:12] 2025-04-15 15:22:40,118 | INFO     | . Timing measurements:
[2025-04-15 11:23:12] 2025-04-15 15:22:40,118 | INFO     | . get job = 0 s
[2025-04-15 11:23:12] 2025-04-15 15:22:40,118 | INFO     | . initial setup = 16 s
[2025-04-15 11:23:12] 2025-04-15 15:22:40,118 | INFO     | . payload setup = 71 s
[2025-04-15 11:23:12] 2025-04-15 15:22:40,118 | INFO     | . stage-in = 0 s
[2025-04-15 11:23:12] 2025-04-15 15:22:40,119 | INFO     | . payload execution = 65983 s
[2025-04-15 11:23:12] 2025-04-15 15:22:40,119 | INFO     | . stage-out = 16 s
[2025-04-15 11:23:12] 2025-04-15 15:22:40,119 | INFO     | . log creation = 3 s
[2025-04-15 11:23:12] 2025-04-15 15:22:40,119 | INFO     | ..............................
[2025-04-15 11:23:12] 2025-04-15 15:22:40,932 | INFO     | 
[2025-04-15 11:23:12] 2025-04-15 15:22:40,932 | INFO     | job summary report
[2025-04-15 11:23:12] 2025-04-15 15:22:40,932 | INFO     | --------------------------------------------------
[2025-04-15 11:23:12] 2025-04-15 15:22:40,932 | INFO     | PanDA job id: 6602132650
[2025-04-15 11:23:12] 2025-04-15 15:22:40,933 | INFO     | task id: 44075483
[2025-04-15 11:23:12] 2025-04-15 15:22:40,933 | INFO     | errors: (none)
[2025-04-15 11:23:12] 2025-04-15 15:22:40,933 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-15 11:23:12] 2025-04-15 15:22:40,933 | INFO     | pilot state: finished 
[2025-04-15 11:23:12] 2025-04-15 15:22:40,933 | INFO     | transexitcode: 0
[2025-04-15 11:23:12] 2025-04-15 15:22:40,934 | INFO     | exeerrorcode: 0
[2025-04-15 11:23:12] 2025-04-15 15:22:40,934 | INFO     | exeerrordiag: 
[2025-04-15 11:23:12] 2025-04-15 15:22:40,934 | INFO     | exitcode: 0
[2025-04-15 11:23:12] 2025-04-15 15:22:40,934 | INFO     | exitmsg: OK
[2025-04-15 11:23:12] 2025-04-15 15:22:40,934 | INFO     | cpuconsumptiontime: 117941 s
[2025-04-15 11:23:12] 2025-04-15 15:22:40,935 | INFO     | nevents: 400
[2025-04-15 11:23:12] 2025-04-15 15:22:40,935 | INFO     | neventsw: 0
[2025-04-15 11:23:12] 2025-04-15 15:22:40,935 | INFO     | pid: 287440
[2025-04-15 11:23:12] 2025-04-15 15:22:40,935 | INFO     | pgrp: 287440
[2025-04-15 11:23:12] 2025-04-15 15:22:40,935 | INFO     | corecount: 8
[2025-04-15 11:23:12] 2025-04-15 15:22:40,940 | INFO     | event service: False
[2025-04-15 11:23:12] 2025-04-15 15:22:40,940 | INFO     | sizes: {0: 2416535, 1: 2417136, 2: 2417248, 5: 2417276, 6: 2417276, 7: 2417475, 20: 2417631, 35: 2417659, 47: 2417687, 58: 2417743, 67: 2417977, 70: 2418285, 66062
[2025-04-15 11:23:12] 2025-04-15 15:22:40,940 | INFO     | --------------------------------------------------
[2025-04-15 11:23:12] 2025-04-15 15:22:40,941 | INFO     | 
[2025-04-15 11:23:12] 2025-04-15 15:22:40,941 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-04-15 11:23:12] 2025-04-15 15:22:41,376 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-15 11:23:12] 2025-04-15 15:22:41,377 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-15 11:23:12] 2025-04-15 15:22:41,378 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-15 11:23:12] 2025-04-15 15:22:41,391 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-15 11:23:12] 2025-04-15 15:22:41,392 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-15 11:23:12] 2025-04-15 15:22:41,392 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-15 11:23:12] 2025-04-15 15:22:41,392 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-15 11:23:12] 2025-04-15 15:22:41,393 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-15 11:23:12] 2025-04-15 15:22:41,393 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-15 11:23:12] 2025-04-15 15:22:41,394 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-15 11:23:12] 2025-04-15 15:22:41,394 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-15 11:23:12] 2025-04-15 15:22:41,394 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-15 11:23:12] 2025-04-15 15:22:41,394 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-15 11:23:12] 2025-04-15 15:22:41,395 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-15 11:23:12] 2025-04-15 15:22:41,395 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-15 11:23:12] 2025-04-15 15:22:41,416 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-15 11:23:12] 2025-04-15 15:22:41,416 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-15 11:23:12] 2025-04-15 15:22:41,417 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-15 11:23:12] 2025-04-15 15:22:41,417 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-15 11:23:12] 2025-04-15 15:22:41,418 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-15 11:23:12] 2025-04-15 15:22:41,418 | INFO     | job 6602132650 has completed (purged errors)
[2025-04-15 11:23:12] 2025-04-15 15:22:41,418 | INFO     | overall cleanup function is called
[2025-04-15 11:23:12] 2025-04-15 15:22:42,484 | INFO     | --- collectZombieJob: --- 10, [287440]
[2025-04-15 11:23:12] 2025-04-15 15:22:42,484 | INFO     | zombie collector waiting for pid 287440
[2025-04-15 11:23:12] 2025-04-15 15:22:42,484 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-15 11:23:12] 2025-04-15 15:22:42,485 | INFO     | collected zombie processes
[2025-04-15 11:23:12] 2025-04-15 15:22:42,485 | INFO     | will attempt to kill all subprocesses of pid=287440
[2025-04-15 11:23:12] 2025-04-15 15:22:52,607 | INFO     | process IDs to be killed: [287440] (in reverse order)
[2025-04-15 11:23:12] 2025-04-15 15:22:54,586 | WARNING  | found no corresponding commands to process id(s)
[2025-04-15 11:23:12] 2025-04-15 15:22:54,587 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-15 11:23:12] 2025-04-15 15:22:54,684 | INFO     | did not find any defunct processes belonging to 287440
[2025-04-15 11:23:12] 2025-04-15 15:22:54,933 | INFO     | did not find any defunct processes belonging to 287440
[2025-04-15 11:23:12] 2025-04-15 15:22:54,934 | INFO     | ready for new job
[2025-04-15 11:23:12] 2025-04-15 15:22:54,934 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-15 11:23:12] 2025-04-15 15:22:54,980 | INFO     | **************************************
[2025-04-15 11:23:12] 2025-04-15 15:22:54,981 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-15 11:23:12] 2025-04-15 15:22:54,981 | INFO     | **************************************
[2025-04-15 11:23:12] 2025-04-15 15:22:54,981 | INFO     | 
[2025-04-15 11:23:12] 2025-04-15 15:22:55,082 | INFO     | architecture information:
[2025-04-15 11:23:12] 2025-04-15 15:22:55,094 | INFO     | executing command: cat /etc/os-release
[2025-04-15 11:23:12] 2025-04-15 15:22:55,271 | INFO     | cat /etc/os-release:
[2025-04-15 11:23:12] NAME="CentOS Linux"
[2025-04-15 11:23:12] VERSION="7 (Core)"
[2025-04-15 11:23:12] ID="centos"
[2025-04-15 11:23:12] ID_LIKE="rhel fedora"
[2025-04-15 11:23:12] VERSION_ID="7"
[2025-04-15 11:23:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-15 11:23:12] ANSI_COLOR="0;31"
[2025-04-15 11:23:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-15 11:23:13] HOME_URL="https://www.centos.org/"
[2025-04-15 11:23:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-15 11:23:13] 
[2025-04-15 11:23:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-15 11:23:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-15 11:23:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-15 11:23:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-15 11:23:13] 
[2025-04-15 11:23:13] 2025-04-15 15:22:55,272 | INFO     | **************************************
[2025-04-15 11:23:13] 2025-04-15 15:22:55,776 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-04-15 11:23:13] 2025-04-15 15:22:56,020 | INFO     | sufficient remaining disk space (93450141696 B)
[2025-04-15 11:23:13] 2025-04-15 15:22:56,021 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-15 11:23:13] 2025-04-15 15:22:56,021 | INFO     | current server update state: UPDATING_FINAL
[2025-04-15 11:23:13] 2025-04-15 15:22:56,022 | INFO     | update_server=False
[2025-04-15 11:23:13] 2025-04-15 15:22:56,022 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-15 11:23:13] 2025-04-15 15:22:56,023 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-15 11:23:13] 2025-04-15 15:22:56,023 | INFO     | found 0 job(s) in 20 queues
[2025-04-15 11:23:13] 2025-04-15 15:22:56,024 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-15 11:23:13] 2025-04-15 15:22:56,024 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-15 11:23:13] 2025-04-15 15:22:56,033 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-15 11:23:13] 2025-04-15 15:22:56,038 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-15 11:23:13] 2025-04-15 15:22:56,038 | INFO     | aborting loop
[2025-04-15 11:23:13] 2025-04-15 15:22:56,091 | INFO     | all data control threads have been joined
[2025-04-15 11:23:13] 2025-04-15 15:22:56,195 | INFO     | all payload control threads have been joined
[2025-04-15 11:23:13] 2025-04-15 15:22:56,195 | INFO     | all job control threads have been joined
[2025-04-15 11:23:13] 2025-04-15 15:22:56,696 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-15 11:23:13] 2025-04-15 15:22:57,028 | INFO     | [job] retrieve thread has finished
[2025-04-15 11:23:13] 2025-04-15 15:22:57,045 | INFO     | [job] job monitor thread has finished
[2025-04-15 11:23:13] 2025-04-15 15:22:57,097 | INFO     | [data] control thread has finished
[2025-04-15 11:23:13] 2025-04-15 15:22:57,201 | INFO     | [payload] control thread has finished
[2025-04-15 11:23:13] 2025-04-15 15:22:57,207 | INFO     | [job] control thread has finished
[2025-04-15 11:23:13] 2025-04-15 15:22:57,565 | INFO     | [payload] execute_payloads thread has finished
[2025-04-15 11:23:13] 2025-04-15 15:22:57,590 | INFO     | [job] create_data_payload thread has finished
[2025-04-15 11:23:13] 2025-04-15 15:22:57,591 | INFO     | [data] copytool_in thread has finished
[2025-04-15 11:23:13] 2025-04-15 15:22:58,050 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-15 11:23:13] 2025-04-15 15:22:58,165 | INFO     | [payload] validate_post thread has finished
[2025-04-15 11:23:13] 2025-04-15 15:22:58,166 | INFO     | [payload] failed_post thread has finished
[2025-04-15 11:23:13] 2025-04-15 15:22:58,208 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-15 11:23:13] 2025-04-15 15:22:58,512 | INFO     | [payload] validate_pre thread has finished
[2025-04-15 11:23:13] 2025-04-15 15:22:58,519 | INFO     | [job] validate thread has finished
[2025-04-15 11:23:13] 2025-04-15 15:22:58,703 | INFO     | [data] copytool_out thread has finished
[2025-04-15 11:23:13] 2025-04-15 15:22:59,215 | INFO     | [job] queue monitor thread has finished
[2025-04-15 11:23:13] 2025-04-15 15:23:00,043 | INFO     | [data] queue_monitor thread has finished
[2025-04-15 11:23:13] 2025-04-15 15:23:01,971 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140160480708416)>', '<ExcThread(monitor, started 140159530030848)>']
[2025-04-15 11:23:13] 2025-04-15 15:23:02,065 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-15 11:23:13] 2025-04-15 15:23:02,068 | INFO     | [monitor] control thread has ended
[2025-04-15 11:23:13] 2025-04-15 15:23:06,998 | INFO     | all workflow threads have been joined
[2025-04-15 11:23:13] 2025-04-15 15:23:06,998 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-15 11:23:13] 2025-04-15 15:23:06,999 | INFO     | traces error code: 0
[2025-04-15 11:23:13] 2025-04-15 15:23:07,000 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-15 11:23:13] 2025-04-15 15:23:10,269 [wrapper] ==== pilot stdout END ====
[2025-04-15 11:23:13] 2025-04-15 15:23:10,291 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-15 11:23:13] 2025-04-15 15:23:10,365 [wrapper] pilotpid: 272201
[2025-04-15 11:23:13] 2025-04-15 15:23:10,423 [wrapper] Pilot exit status: 0
[2025-04-15 11:23:13] 2025-04-15 15:23:10,643 [wrapper] pandaids: 6602132650
[2025-04-15 11:23:13] 2025-04-15 15:23:11,950 [wrapper] cleanup supervisor_pilot 3792784 272202
[2025-04-15 11:23:13] 2025-04-15 15:23:11,972 [wrapper] Test setup, not cleaning
[2025-04-15 11:23:13] 2025-04-15 15:23:12,002 [wrapper] apfmon messages muted
[2025-04-15 11:23:13] 2025-04-15 15:23:12,038 [wrapper] ==== wrapper stdout END ====
[2025-04-15 11:23:13] 2025-04-15 15:23:12,077 [wrapper] ==== wrapper stderr END ====
[2025-04-15 11:23:13]  *** Error codes and diagnostics ***
[2025-04-15 11:23:13]     "exeErrorCode": 0,
[2025-04-15 11:23:13]     "exeErrorDiag": "",
[2025-04-15 11:23:13]     "pilotErrorCode": 0,
[2025-04-15 11:23:13]     "pilotErrorDiag": "",
[2025-04-15 11:23:13]  *** Listing of results directory ***
[2025-04-15 11:23:13] total 420524
[2025-04-15 11:23:13] -rw-r--r--. 1 boincer umatlas    495897 Apr 14 12:37 pilot3.tar.gz
[2025-04-15 11:23:13] -rw-r--r--. 1 boincer umatlas      5111 Apr 14 12:43 queuedata.json
[2025-04-15 11:23:13] -rwx------. 1 boincer umatlas     37140 Apr 14 12:44 runpilot2-wrapper.sh
[2025-04-15 11:23:13] -rw-r--r--. 1 boincer umatlas       100 Apr 14 16:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-15 11:23:13] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 14 16:56 run_atlas
[2025-04-15 11:23:13] -rw-r--r--. 1 boincer umatlas       105 Apr 14 16:56 job.xml
[2025-04-15 11:23:13] -rw-r--r--. 2 boincer umatlas 226559704 Apr 14 16:56 EVNT.44075481._000743.pool.root.1
[2025-04-15 11:23:13] drwxrwx--x. 2 boincer umatlas      4096 Apr 14 16:56 shared
[2025-04-15 11:23:13] -rw-r--r--. 2 boincer umatlas    508894 Apr 14 16:56 input.tar.gz
[2025-04-15 11:23:13] -rw-r--r--. 2 boincer umatlas     17569 Apr 14 16:56 start_atlas.sh
[2025-04-15 11:23:13] -rw-r--r--. 1 boincer umatlas         0 Apr 14 16:56 boinc_lockfile
[2025-04-15 11:23:13] -rw-r--r--. 1 boincer umatlas      2577 Apr 14 16:56 pandaJob.out
[2025-04-15 11:23:13] -rw-------. 1 boincer umatlas       467 Apr 14 16:56 setup.sh.local
[2025-04-15 11:23:13] -rw-------. 1 boincer umatlas    986091 Apr 14 16:57 agis_schedconf.cvmfs.json
[2025-04-15 11:23:13] drwx------. 4 boincer umatlas      4096 Apr 14 16:58 pilot3
[2025-04-15 11:23:13] -rw-------. 1 boincer umatlas 191380142 Apr 15 11:09 HITS.44075483._018786.pool.root.1
[2025-04-15 11:23:13] -rw-r--r--. 1 boincer umatlas       532 Apr 15 11:10 boinc_task_state.xml
[2025-04-15 11:23:13] -rw-------. 1 boincer umatlas      1069 Apr 15 11:21 memory_monitor_summary.json
[2025-04-15 11:23:13] -rw-------. 1 boincer umatlas   1603529 Apr 15 11:21 agis_ddmendpoints.agis.ALL.json
[2025-04-15 11:23:13] -rw-------. 1 boincer umatlas    759177 Apr 15 11:21 log.44075483._018786.job.log.tgz.1
[2025-04-15 11:23:13] -rw-r--r--. 1 boincer umatlas      6858 Apr 15 11:22 init_data.xml
[2025-04-15 11:23:13] -rw-------. 1 boincer umatlas        95 Apr 15 11:22 pilot_heartbeat.json
[2025-04-15 11:23:13] -rw-------. 1 boincer umatlas      7759 Apr 15 11:22 heartbeat.json
[2025-04-15 11:23:13] -rw-------. 1 boincer umatlas      4476 Apr 15 11:23 pilotlog.txt
[2025-04-15 11:23:13] -rw-r--r--. 1 boincer umatlas      8192 Apr 15 11:23 boinc_mmap_file
[2025-04-15 11:23:13] -rw-r--r--. 1 boincer umatlas        29 Apr 15 11:23 wrapper_checkpoint.txt
[2025-04-15 11:23:13] -rw-------. 1 boincer umatlas   3657668 Apr 15 11:23 log.44075483._018786.job.log.1
[2025-04-15 11:23:13] -rw-------. 1 boincer umatlas       357 Apr 15 11:23 output.list
[2025-04-15 11:23:13] -rw-r--r--. 1 boincer umatlas       620 Apr 15 11:23 runtime_log
[2025-04-15 11:23:13] -rw-------. 1 boincer umatlas   4433920 Apr 15 11:23 result.tar.gz
[2025-04-15 11:23:13] -rw-------. 1 boincer umatlas       667 Apr 15 11:23 rxpNDmo5bO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm4ZWLDmRy7hqn.diag
[2025-04-15 11:23:13] -rw-r--r--. 1 boincer umatlas     11429 Apr 15 11:23 runtime_log.err
[2025-04-15 11:23:13] -rw-r--r--. 1 boincer umatlas     21574 Apr 15 11:23 stderr.txt
[2025-04-15 11:23:13] HITS file was successfully produced:
[2025-04-15 11:23:13] -rw-------. 1 boincer umatlas 191380142 Apr 15 11:09 shared/HITS.pool.root.1
[2025-04-15 11:23:13]  *** Contents of shared directory: ***
[2025-04-15 11:23:13] total 413008
[2025-04-15 11:23:13] -rw-r--r--. 2 boincer umatlas 226559704 Apr 14 16:56 ATLAS.root_0
[2025-04-15 11:23:13] -rw-r--r--. 2 boincer umatlas    508894 Apr 14 16:56 input.tar.gz
[2025-04-15 11:23:13] -rw-r--r--. 2 boincer umatlas     17569 Apr 14 16:56 start_atlas.sh
[2025-04-15 11:23:13] -rw-------. 1 boincer umatlas 191380142 Apr 15 11:09 HITS.pool.root.1
[2025-04-15 11:23:13] -rw-------. 1 boincer umatlas   4433920 Apr 15 11:23 result.tar.gz
11:23:15 (265411): run_atlas exited; CPU time 122898.539628
11:23:15 (265411): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN