Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:38:43 (3552719): wrapper (7.7.26015): starting
18:38:43 (3552719): wrapper: running run_atlas (--nthreads 12)
[2025-04-14 18:38:43] Arguments: --nthreads 12
[2025-04-14 18:38:43] Threads: 12
[2025-04-14 18:38:43] Checking for CVMFS
[2025-04-14 18:38:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-14 18:38:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-14 18:38:44] Running cvmfs_config stat atlas.cern.ch
[2025-04-14 18:38:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-14 18:38:44] 2.11.5.0 2775 16357 238716 144870 3 170 36987775 45568000 13004 130560 0 144946025 99.768 123946879 24394 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-04-14 18:38:44] CVMFS is ok
[2025-04-14 18:38:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-14 18:38:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-14 18:38:44] Further information can be found at the LHC@home message board.
[2025-04-14 18:38:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-14 18:38:44] Checking for apptainer binary...
[2025-04-14 18:38:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-14 18:38:44] Running /usr/bin/apptainer --version
[2025-04-14 18:38:44] apptainer version 1.3.5-1.el9
[2025-04-14 18:38:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-14 18:38:45] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0102.triumf.lcg
[2025-04-14 18:38:45] apptainer works
[2025-04-14 18:38:45] Set ATHENA_PROC_NUMBER=12
[2025-04-14 18:38:45] Set ATHENA_CORE_NUMBER=12
[2025-04-14 18:38:45] Starting ATLAS job with PandaID=6602129632
[2025-04-14 18:38:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-14 20:19:40]  *** The last 200 lines of the pilot log: ***
[2025-04-14 20:19:40]  lfn=log.44075483._017756.job.log.tgz.1
[2025-04-14 20:19:40]  mtime=0
[2025-04-14 20:19:40]  protocol_id=None
[2025-04-14 20:19:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-14 20:19:40]  replicas=None
[2025-04-14 20:19:40]  scope=mc23_13p6TeV
[2025-04-14 20:19:40]  status=None
[2025-04-14 20:19:40]  status_code=0
[2025-04-14 20:19:40]  storage_token=
[2025-04-14 20:19:40]  surl=/home/boinc/slots/0/PanDA_Pilot-6602129632/log.44075483._017756.job.log.tgz.1
[2025-04-14 20:19:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e8/82/log.44075483._017756.job.log.tgz.1
[2025-04-14 20:19:40]  workdir=None
[2025-04-14 20:19:40] ]
[2025-04-14 20:19:40] 2025-04-15 03:19:12,575 | INFO     | transferring file log.44075483._017756.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6602129632/log.44075483._017756.job.log.tgz.1 to /home/boinc/slots/0/log.
[2025-04-14 20:19:40] 2025-04-15 03:19:12,576 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6602129632/log.44075483._017756.job.log.tgz.1 /home/boinc/slots/0/log.44075483._017756.job.log.t
[2025-04-14 20:19:40] 2025-04-15 03:19:12,591 | INFO     | adding to output.list: log.44075483._017756.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e8/82/log.44075483._017756.job.log.tg
[2025-04-14 20:19:40] 2025-04-15 03:19:12,592 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-14 20:19:40] 2025-04-15 03:19:12,592 | INFO     | summary of transferred files:
[2025-04-14 20:19:40] 2025-04-15 03:19:12,593 | INFO     |  -- lfn=log.44075483._017756.job.log.tgz.1, status_code=0, status=transferred
[2025-04-14 20:19:40] 2025-04-15 03:19:12,593 | INFO     | stage-out finished correctly
[2025-04-14 20:19:40] 2025-04-15 03:19:12,792 | INFO     | monitor loop #422: job 0:6602129632 is in state 'finished'
[2025-04-14 20:19:40] 2025-04-15 03:19:12,793 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-14 20:19:40] 2025-04-15 03:19:14,296 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-14 20:19:40] 2025-04-15 03:19:15,295 | INFO     | monitor loop #423: job 0:6602129632 is in state 'finished'
[2025-04-14 20:19:40] 2025-04-15 03:19:15,296 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-14 20:19:40] 2025-04-15 03:19:16,282 | INFO     | job 6602129632 has state=finished
[2025-04-14 20:19:40] 2025-04-15 03:19:16,282 | INFO     | preparing for final server update for job 6602129632 in state='finished'
[2025-04-14 20:19:40] 2025-04-15 03:19:16,283 | INFO     | this job has now completed (state=finished)
[2025-04-14 20:19:40] 2025-04-15 03:19:16,283 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-14 20:19:40] 2025-04-15 03:19:16,283 | INFO     | log transfer has been attempted: DONE
[2025-04-14 20:19:40] 2025-04-15 03:19:16,283 | INFO     | job 6602129632 has finished - writing final server update
[2025-04-14 20:19:40] 2025-04-15 03:19:16,284 | INFO     | total number of processed events: 400 (read)
[2025-04-14 20:19:40] 2025-04-15 03:19:16,289 | INFO     | executing command: lscpu
[2025-04-14 20:19:40] 2025-04-15 03:19:16,341 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-14 20:19:40] 2025-04-15 03:19:17,798 | INFO     | monitor loop #424: job 0:6602129632 is in state 'finished'
[2025-04-14 20:19:40] 2025-04-15 03:19:17,799 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-14 20:19:40] 2025-04-15 03:19:19,258 | INFO     | PID=3564859 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-14 20:19:40] 2025-04-15 03:19:19,258 | INFO     | .. there are 28 such processes running
[2025-04-14 20:19:40] 2025-04-15 03:19:20,302 | INFO     | monitor loop #425: job 0:6602129632 is in state 'finished'
[2025-04-14 20:19:40] 2025-04-15 03:19:20,303 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-14 20:19:40] 2025-04-15 03:19:20,893 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-14 20:19:40] 2025-04-15 03:19:20,894 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6602129632/memory_monitor_summary.json (trf name=prmon)
[2025-04-14 20:19:40] 2025-04-15 03:19:20,894 | INFO     | extracted standard info from prmon json
[2025-04-14 20:19:40] 2025-04-15 03:19:20,894 | INFO     | extracted standard memory fields from prmon json
[2025-04-14 20:19:40] 2025-04-15 03:19:20,895 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-14 20:19:40] 2025-04-15 03:19:20,895 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-14 20:19:40] 2025-04-15 03:19:20,895 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-14 20:19:40] 2025-04-15 03:19:20,896 | INFO     | fitting pss+swap vs Time
[2025-04-14 20:19:40] 2025-04-15 03:19:20,897 | INFO     | sum of square deviations: 226011876.90000018
[2025-04-14 20:19:40] 2025-04-15 03:19:20,897 | INFO     | sum of deviations: 19940717731.900005
[2025-04-14 20:19:40] 2025-04-15 03:19:20,897 | INFO     | mean x: 1744684285.7
[2025-04-14 20:19:40] 2025-04-15 03:19:20,897 | INFO     | mean y: 2674708.144444444
[2025-04-14 20:19:40] 2025-04-15 03:19:20,897 | INFO     | -- intersect: -153928425504.86945
[2025-04-14 20:19:40] 2025-04-15 03:19:20,897 | INFO     | intersect: -153928425504.86945
[2025-04-14 20:19:40] 2025-04-15 03:19:20,897 | INFO     | chi2: 2.1733693891940002
[2025-04-14 20:19:40] 2025-04-15 03:19:20,898 | INFO     | -- intersect: -153928425504.86945
[2025-04-14 20:19:40] 2025-04-15 03:19:20,898 | INFO     | current memory leak: 88.23 B/s (using 90 data points, chi2=2.17)
[2025-04-14 20:19:40] 2025-04-15 03:19:20,898 | INFO     | ..............................
[2025-04-14 20:19:40] 2025-04-15 03:19:20,898 | INFO     | . Timing measurements:
[2025-04-14 20:19:40] 2025-04-15 03:19:20,898 | INFO     | . get job = 0 s
[2025-04-14 20:19:40] 2025-04-15 03:19:20,898 | INFO     | . initial setup = 4 s
[2025-04-14 20:19:40] 2025-04-15 03:19:20,898 | INFO     | . payload setup = 38 s
[2025-04-14 20:19:40] 2025-04-15 03:19:20,898 | INFO     | . stage-in = 0 s
[2025-04-14 20:19:40] 2025-04-15 03:19:20,898 | INFO     | . payload execution = 5893 s
[2025-04-14 20:19:40] 2025-04-15 03:19:20,898 | INFO     | . stage-out = 0 s
[2025-04-14 20:19:40] 2025-04-15 03:19:20,898 | INFO     | . log creation = 0 s
[2025-04-14 20:19:40] 2025-04-15 03:19:20,899 | INFO     | ..............................
[2025-04-14 20:19:40] 2025-04-15 03:19:20,965 | INFO     | 
[2025-04-14 20:19:40] 2025-04-15 03:19:20,965 | INFO     | job summary report
[2025-04-14 20:19:40] 2025-04-15 03:19:20,965 | INFO     | --------------------------------------------------
[2025-04-14 20:19:40] 2025-04-15 03:19:20,965 | INFO     | PanDA job id: 6602129632
[2025-04-14 20:19:40] 2025-04-15 03:19:20,965 | INFO     | task id: 44075483
[2025-04-14 20:19:40] 2025-04-15 03:19:20,965 | INFO     | errors: (none)
[2025-04-14 20:19:40] 2025-04-15 03:19:20,965 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-14 20:19:40] 2025-04-15 03:19:20,966 | INFO     | pilot state: finished 
[2025-04-14 20:19:40] 2025-04-15 03:19:20,966 | INFO     | transexitcode: 0
[2025-04-14 20:19:40] 2025-04-15 03:19:20,966 | INFO     | exeerrorcode: 0
[2025-04-14 20:19:40] 2025-04-15 03:19:20,966 | INFO     | exeerrordiag: 
[2025-04-14 20:19:40] 2025-04-15 03:19:20,966 | INFO     | exitcode: 0
[2025-04-14 20:19:40] 2025-04-15 03:19:20,966 | INFO     | exitmsg: OK
[2025-04-14 20:19:40] 2025-04-15 03:19:20,966 | INFO     | cpuconsumptiontime: 35275 s
[2025-04-14 20:19:40] 2025-04-15 03:19:20,966 | INFO     | nevents: 400
[2025-04-14 20:19:40] 2025-04-15 03:19:20,966 | INFO     | neventsw: 0
[2025-04-14 20:19:40] 2025-04-15 03:19:20,966 | INFO     | pid: 3590246
[2025-04-14 20:19:40] 2025-04-15 03:19:20,966 | INFO     | pgrp: 3590246
[2025-04-14 20:19:40] 2025-04-15 03:19:20,966 | INFO     | corecount: 12
[2025-04-14 20:19:40] 2025-04-15 03:19:20,966 | INFO     | event service: False
[2025-04-14 20:19:40] 2025-04-15 03:19:20,966 | INFO     | sizes: {0: 2417190, 1: 2417389, 2: 2417389, 13: 2417417, 20: 2417679, 23: 2417707, 5936: 2444420, 5937: 2453355, 5938: 2453411, 5945: 2453581}
[2025-04-14 20:19:40] 2025-04-15 03:19:20,966 | INFO     | --------------------------------------------------
[2025-04-14 20:19:40] 2025-04-15 03:19:20,966 | INFO     | 
[2025-04-14 20:19:40] 2025-04-15 03:19:20,966 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-04-14 20:19:40] 2025-04-15 03:19:20,985 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-14 20:19:40] 2025-04-15 03:19:20,986 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-14 20:19:40] 2025-04-15 03:19:20,986 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-14 20:19:40] 2025-04-15 03:19:20,986 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-14 20:19:40] 2025-04-15 03:19:20,986 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-14 20:19:40] 2025-04-15 03:19:20,986 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-14 20:19:40] 2025-04-15 03:19:20,986 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-14 20:19:40] 2025-04-15 03:19:20,986 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-14 20:19:40] 2025-04-15 03:19:20,986 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-14 20:19:40] 2025-04-15 03:19:20,986 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-14 20:19:40] 2025-04-15 03:19:20,987 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-14 20:19:40] 2025-04-15 03:19:20,987 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-14 20:19:40] 2025-04-15 03:19:20,987 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-14 20:19:40] 2025-04-15 03:19:20,987 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-14 20:19:40] 2025-04-15 03:19:20,987 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-14 20:19:40] 2025-04-15 03:19:20,987 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-14 20:19:40] 2025-04-15 03:19:20,987 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-14 20:19:40] 2025-04-15 03:19:20,987 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-14 20:19:40] 2025-04-15 03:19:20,987 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-14 20:19:40] 2025-04-15 03:19:20,987 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-14 20:19:40] 2025-04-15 03:19:20,988 | INFO     | job 6602129632 has completed (purged errors)
[2025-04-14 20:19:40] 2025-04-15 03:19:20,988 | INFO     | overall cleanup function is called
[2025-04-14 20:19:40] 2025-04-15 03:19:21,995 | INFO     | --- collectZombieJob: --- 10, [3590246]
[2025-04-14 20:19:40] 2025-04-15 03:19:21,996 | INFO     | zombie collector waiting for pid 3590246
[2025-04-14 20:19:40] 2025-04-15 03:19:21,996 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-14 20:19:40] 2025-04-15 03:19:21,996 | INFO     | collected zombie processes
[2025-04-14 20:19:40] 2025-04-15 03:19:21,996 | INFO     | will attempt to kill all subprocesses of pid=3590246
[2025-04-14 20:19:40] 2025-04-15 03:19:22,220 | INFO     | process IDs to be killed: [3590246] (in reverse order)
[2025-04-14 20:19:40] 2025-04-15 03:19:22,307 | WARNING  | found no corresponding commands to process id(s)
[2025-04-14 20:19:40] 2025-04-15 03:19:22,307 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-14 20:19:40] 2025-04-15 03:19:22,320 | INFO     | did not find any defunct processes belonging to 3590246
[2025-04-14 20:19:40] 2025-04-15 03:19:22,332 | INFO     | did not find any defunct processes belonging to 3590246
[2025-04-14 20:19:40] 2025-04-15 03:19:22,333 | INFO     | ready for new job
[2025-04-14 20:19:40] 2025-04-15 03:19:22,333 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-14 20:19:40] 2025-04-15 03:19:22,335 | INFO     | **************************************
[2025-04-14 20:19:40] 2025-04-15 03:19:22,335 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-14 20:19:40] 2025-04-15 03:19:22,335 | INFO     | **************************************
[2025-04-14 20:19:40] 2025-04-15 03:19:22,335 | INFO     | 
[2025-04-14 20:19:40] 2025-04-15 03:19:22,338 | INFO     | architecture information:
[2025-04-14 20:19:40] 2025-04-15 03:19:22,338 | INFO     | executing command: cat /etc/os-release
[2025-04-14 20:19:40] 2025-04-15 03:19:22,353 | INFO     | cat /etc/os-release:
[2025-04-14 20:19:40] NAME="CentOS Linux"
[2025-04-14 20:19:40] VERSION="7 (Core)"
[2025-04-14 20:19:40] ID="centos"
[2025-04-14 20:19:40] ID_LIKE="rhel fedora"
[2025-04-14 20:19:40] VERSION_ID="7"
[2025-04-14 20:19:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-14 20:19:40] ANSI_COLOR="0;31"
[2025-04-14 20:19:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-14 20:19:40] HOME_URL="https://www.centos.org/"
[2025-04-14 20:19:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-14 20:19:40] 
[2025-04-14 20:19:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-14 20:19:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-14 20:19:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-14 20:19:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-14 20:19:40] 
[2025-04-14 20:19:40] 2025-04-15 03:19:22,354 | INFO     | **************************************
[2025-04-14 20:19:40] 2025-04-15 03:19:22,857 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-04-14 20:19:40] 2025-04-15 03:19:22,877 | INFO     | sufficient remaining disk space (1928619622400 B)
[2025-04-14 20:19:40] 2025-04-15 03:19:22,877 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-14 20:19:40] 2025-04-15 03:19:22,878 | INFO     | current server update state: UPDATING_FINAL
[2025-04-14 20:19:40] 2025-04-15 03:19:22,878 | INFO     | update_server=False
[2025-04-14 20:19:40] 2025-04-15 03:19:22,878 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-14 20:19:40] 2025-04-15 03:19:22,878 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-14 20:19:40] 2025-04-15 03:19:23,172 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-14 20:19:40] 2025-04-15 03:19:23,270 | INFO     | found 0 job(s) in 20 queues
[2025-04-14 20:19:40] 2025-04-15 03:19:23,270 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-14 20:19:40] 2025-04-15 03:19:23,270 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-14 20:19:40] 2025-04-15 03:19:23,322 | INFO     | all data control threads have been joined
[2025-04-14 20:19:40] 2025-04-15 03:19:23,811 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-14 20:19:40] 2025-04-15 03:19:23,811 | INFO     | aborting loop
[2025-04-14 20:19:40] 2025-04-15 03:19:23,830 | INFO     | all job control threads have been joined
[2025-04-14 20:19:40] 2025-04-15 03:19:23,882 | INFO     | [job] retrieve thread has finished
[2025-04-14 20:19:40] 2025-04-15 03:19:23,883 | INFO     | [job] queue monitor thread has finished
[2025-04-14 20:19:40] 2025-04-15 03:19:23,930 | INFO     | all payload control threads have been joined
[2025-04-14 20:19:40] 2025-04-15 03:19:23,968 | INFO     | [payload] validate_post thread has finished
[2025-04-14 20:19:40] 2025-04-15 03:19:24,327 | INFO     | [data] control thread has finished
[2025-04-14 20:19:40] 2025-04-15 03:19:24,653 | INFO     | [data] copytool_in thread has finished
[2025-04-14 20:19:40] 2025-04-15 03:19:24,720 | INFO     | [payload] execute_payloads thread has finished
[2025-04-14 20:19:40] 2025-04-15 03:19:24,744 | INFO     | [payload] failed_post thread has finished
[2025-04-14 20:19:40] 2025-04-15 03:19:24,816 | INFO     | [job] job monitor thread has finished
[2025-04-14 20:19:40] 2025-04-15 03:19:24,836 | INFO     | [job] control thread has finished
[2025-04-14 20:19:40] 2025-04-15 03:19:24,869 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-14 20:19:40] 2025-04-15 03:19:24,935 | INFO     | [payload] control thread has finished
[2025-04-14 20:19:40] 2025-04-15 03:19:25,015 | INFO     | [payload] validate_pre thread has finished
[2025-04-14 20:19:40] 2025-04-15 03:19:25,016 | INFO     | [job] validate thread has finished
[2025-04-14 20:19:40] 2025-04-15 03:19:25,044 | INFO     | [job] create_data_payload thread has finished
[2025-04-14 20:19:40] 2025-04-15 03:19:25,177 | INFO     | [data] copytool_out thread has finished
[2025-04-14 20:19:40] 2025-04-15 03:19:28,876 | INFO     | [data] queue_monitor thread has finished
[2025-04-14 20:19:40] 2025-04-15 03:19:33,709 | INFO     | job.realtimelogging is not enabled
[2025-04-14 20:19:40] 2025-04-15 03:19:34,713 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-14 20:19:40] 2025-04-15 03:19:35,450 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140352340170560)>', '<ExcThread(monitor, started 140351637530368)>']
[2025-04-14 20:19:40] 2025-04-15 03:19:36,334 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-14 20:19:40] 2025-04-15 03:19:36,335 | INFO     | [monitor] control thread has ended
[2025-04-14 20:19:40] 2025-04-15 03:19:40,476 | INFO     | all workflow threads have been joined
[2025-04-14 20:19:40] 2025-04-15 03:19:40,476 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-14 20:19:40] 2025-04-15 03:19:40,477 | INFO     | traces error code: 0
[2025-04-14 20:19:40] 2025-04-15 03:19:40,477 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-14 20:19:40] 2025-04-15 03:19:40,596 [wrapper] ==== pilot stdout END ====
[2025-04-14 20:19:40] 2025-04-15 03:19:40,600 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-14 20:19:40] 2025-04-15 03:19:40,603 [wrapper] pilotpid: 3564859
[2025-04-14 20:19:40] 2025-04-15 03:19:40,606 [wrapper] Pilot exit status: 0
[2025-04-14 20:19:40] 2025-04-15 03:19:40,619 [wrapper] pandaids: 6602129632
[2025-04-14 20:19:40] 2025-04-15 03:19:40,679 [wrapper] cleanup supervisor_pilot  486779 3564860
[2025-04-14 20:19:40] 2025-04-15 03:19:40,684 [wrapper] Test setup, not cleaning
[2025-04-14 20:19:40] 2025-04-15 03:19:40,687 [wrapper] apfmon messages muted
[2025-04-14 20:19:40] 2025-04-15 03:19:40,690 [wrapper] ==== wrapper stdout END ====
[2025-04-14 20:19:40] 2025-04-15 03:19:40,693 [wrapper] ==== wrapper stderr END ====
[2025-04-14 20:19:40]  *** Error codes and diagnostics ***
[2025-04-14 20:19:40]     "exeErrorCode": 0,
[2025-04-14 20:19:40]     "exeErrorDiag": "",
[2025-04-14 20:19:40]     "pilotErrorCode": 0,
[2025-04-14 20:19:40]     "pilotErrorDiag": "",
[2025-04-14 20:19:40]  *** Listing of results directory ***
[2025-04-14 20:19:40] total 421964
[2025-04-14 20:19:40] -rw-r--r--. 1 boinc boinc    495897 Apr 14 07:17 pilot3.tar.gz
[2025-04-14 20:19:40] -rw-r--r--. 1 boinc boinc      5111 Apr 14 07:25 queuedata.json
[2025-04-14 20:19:40] -rwx------. 1 boinc boinc     37140 Apr 14 07:27 runpilot2-wrapper.sh
[2025-04-14 20:19:40] -rw-r--r--. 1 boinc boinc       100 Apr 14 18:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-14 20:19:40] -rwxr-xr-x. 1 boinc boinc      7986 Apr 14 18:38 run_atlas
[2025-04-14 20:19:40] -rw-r--r--. 1 boinc boinc       105 Apr 14 18:38 job.xml
[2025-04-14 20:19:40] -rw-r--r--. 1 boinc boinc      6597 Apr 14 18:38 init_data.xml
[2025-04-14 20:19:40] -rw-r--r--. 2 boinc boinc 223555812 Apr 14 18:38 EVNT.44075481._000702.pool.root.1
[2025-04-14 20:19:40] drwxrwx--x. 2 boinc boinc      4096 Apr 14 18:38 shared
[2025-04-14 20:19:40] -rw-r--r--. 2 boinc boinc    508896 Apr 14 18:38 input.tar.gz
[2025-04-14 20:19:40] -rw-r--r--. 2 boinc boinc     17569 Apr 14 18:38 start_atlas.sh
[2025-04-14 20:19:40] -rw-r--r--. 1 boinc boinc         0 Apr 14 18:38 boinc_lockfile
[2025-04-14 20:19:40] -rw-r--r--. 1 boinc boinc      2578 Apr 14 18:38 pandaJob.out
[2025-04-14 20:19:40] -rw-------. 1 boinc boinc       424 Apr 14 18:38 setup.sh.local
[2025-04-14 20:19:40] -rw-------. 1 boinc boinc    983985 Apr 14 18:39 agis_schedconf.cvmfs.json
[2025-04-14 20:19:40] -rw-------. 1 boinc boinc   1603529 Apr 14 18:39 agis_ddmendpoints.agis.ALL.json
[2025-04-14 20:19:40] drwx------. 4 boinc boinc      4096 Apr 14 18:39 pilot3
[2025-04-14 20:19:40] -rw-------. 1 boinc boinc 202819785 Apr 14 20:18 HITS.44075483._017756.pool.root.1
[2025-04-14 20:19:40] -rw-r--r--. 1 boinc boinc       530 Apr 14 20:18 boinc_task_state.xml
[2025-04-14 20:19:40] -rw-------. 1 boinc boinc      1053 Apr 14 20:19 memory_monitor_summary.json
[2025-04-14 20:19:40] -rw-------. 1 boinc boinc    383111 Apr 14 20:19 log.44075483._017756.job.log.tgz.1
[2025-04-14 20:19:40] -rw-------. 1 boinc boinc      7743 Apr 14 20:19 heartbeat.json
[2025-04-14 20:19:40] -rw-------. 1 boinc boinc        95 Apr 14 20:19 pilot_heartbeat.json
[2025-04-14 20:19:40] -rw-r--r--. 1 boinc boinc      8192 Apr 14 20:19 boinc_mmap_file
[2025-04-14 20:19:40] -rw-r--r--. 1 boinc boinc        27 Apr 14 20:19 wrapper_checkpoint.txt
[2025-04-14 20:19:40] -rw-------. 1 boinc boinc      4424 Apr 14 20:19 pilotlog.txt
[2025-04-14 20:19:40] -rw-------. 1 boinc boinc    550361 Apr 14 20:19 log.44075483._017756.job.log.1
[2025-04-14 20:19:40] -rw-------. 1 boinc boinc       357 Apr 14 20:19 output.list
[2025-04-14 20:19:40] -rw-r--r--. 1 boinc boinc       620 Apr 14 20:19 runtime_log
[2025-04-14 20:19:40] -rw-------. 1 boinc boinc    952320 Apr 14 20:19 result.tar.gz
[2025-04-14 20:19:40] -rw-r--r--. 1 boinc boinc     11144 Apr 14 20:19 runtime_log.err
[2025-04-14 20:19:40] -rw-------. 1 boinc boinc       662 Apr 14 20:19 iy8NDmMxZO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm7NWLDm5QeDhn.diag
[2025-04-14 20:19:40] -rw-r--r--. 1 boinc boinc     21847 Apr 14 20:19 stderr.txt
[2025-04-14 20:19:40] HITS file was successfully produced:
[2025-04-14 20:19:40] -rw-------. 1 boinc boinc 202819785 Apr 14 20:18 shared/HITS.pool.root.1
[2025-04-14 20:19:40]  *** Contents of shared directory: ***
[2025-04-14 20:19:40] total 417848
[2025-04-14 20:19:40] -rw-r--r--. 2 boinc boinc 223555812 Apr 14 18:38 ATLAS.root_0
[2025-04-14 20:19:40] -rw-r--r--. 2 boinc boinc    508896 Apr 14 18:38 input.tar.gz
[2025-04-14 20:19:40] -rw-r--r--. 2 boinc boinc     17569 Apr 14 18:38 start_atlas.sh
[2025-04-14 20:19:40] -rw-------. 1 boinc boinc 202819785 Apr 14 20:18 HITS.pool.root.1
[2025-04-14 20:19:40] -rw-------. 1 boinc boinc    952320 Apr 14 20:19 result.tar.gz
20:19:41 (3552719): run_atlas exited; CPU time 35347.984959
20:19:41 (3552719): called boinc_finish(0)

</stderr_txt>
]]>

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