Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:22:48 (3875): wrapper (7.7.26015): starting
14:22:48 (3875): wrapper: running run_atlas (--nthreads 12)
[2025-04-14 14:22:48] Arguments: --nthreads 12
[2025-04-14 14:22:48] Threads: 12
[2025-04-14 14:22:48] Checking for CVMFS
[2025-04-14 14:22:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-14 14:22:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-14 14:22:49] Running cvmfs_config stat atlas.cern.ch
[2025-04-14 14:22:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-14 14:22:49] 2.11.2.0 25724 177682 104376 144858 2 127 15715471 18432000 3161 130560 0 17872969 99.259 40314720 36890 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-14 14:22:49] CVMFS is ok
[2025-04-14 14:22:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-14 14:22:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-14 14:22:49] Further information can be found at the LHC@home message board.
[2025-04-14 14:22:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-14 14:22:49] Checking for apptainer binary...
[2025-04-14 14:22:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-14 14:22:49] Running /usr/bin/apptainer --version
[2025-04-14 14:22:57] apptainer version 1.3.2-1.el7
[2025-04-14 14:22:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-14 14:23:10] c-206-24.aglt2.org
[2025-04-14 14:23:10] apptainer works
[2025-04-14 14:23:11] Set ATHENA_PROC_NUMBER=12
[2025-04-14 14:23:11] Set ATHENA_CORE_NUMBER=12
[2025-04-14 14:23:11] Starting ATLAS job with PandaID=6602129604
[2025-04-14 14:23:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-15 03:39:29]  *** The last 200 lines of the pilot log: ***
[2025-04-15 03:39:29] 2025-04-15 07:39:08,879 | INFO     | -- intersect: -8654993640.054667
[2025-04-15 03:39:29] 2025-04-15 07:39:08,879 | INFO     | intersect: -8654993640.054667
[2025-04-15 03:39:29] 2025-04-15 07:39:08,880 | INFO     | chi2: 7.973068667932809
[2025-04-15 03:39:29] 2025-04-15 07:39:08,880 | INFO     | current chi2=7.973068667932809 (change=16.68196031260945 %)
[2025-04-15 03:39:29] 2025-04-15 07:39:08,880 | INFO     | right removable region: 776
[2025-04-15 03:39:29] 2025-04-15 07:39:08,882 | INFO     | sum of square deviations: 145457351887.89175
[2025-04-15 03:39:29] 2025-04-15 07:39:08,904 | INFO     | sum of deviations: 356217293387.18823
[2025-04-15 03:39:29] 2025-04-15 07:39:08,904 | INFO     | mean x: 1744679023.0810812
[2025-04-15 03:39:29] 2025-04-15 07:39:08,904 | INFO     | mean y: 2633170.8223938225
[2025-04-15 03:39:29] 2025-04-15 07:39:08,904 | INFO     | -- intersect: -4269992663.2457457
[2025-04-15 03:39:29] 2025-04-15 07:39:08,905 | INFO     | intersect: -4269992663.2457457
[2025-04-15 03:39:29] 2025-04-15 07:39:08,906 | INFO     | chi2: 5.914368819603083
[2025-04-15 03:39:29] 2025-04-15 07:39:08,906 | INFO     | current chi2=5.914368819603083 (change=38.19523742226629 %)
[2025-04-15 03:39:29] 2025-04-15 07:39:08,908 | INFO     | sum of square deviations: 142667034067.01013
[2025-04-15 03:39:29] 2025-04-15 07:39:08,929 | INFO     | sum of deviations: 168124332236.31058
[2025-04-15 03:39:29] 2025-04-15 07:39:08,930 | INFO     | mean x: 1744679175.5880828
[2025-04-15 03:39:29] 2025-04-15 07:39:08,930 | INFO     | mean y: 2643449.642487047
[2025-04-15 03:39:29] 2025-04-15 07:39:08,930 | INFO     | -- intersect: -2053353741.8640711
[2025-04-15 03:39:29] 2025-04-15 07:39:08,930 | INFO     | intersect: -2053353741.8640711
[2025-04-15 03:39:29] 2025-04-15 07:39:08,931 | INFO     | chi2: 4.055245227021449
[2025-04-15 03:39:29] 2025-04-15 07:39:08,932 | INFO     | current chi2=4.055245227021449 (change=31.434015180446607 %)
[2025-04-15 03:39:29] 2025-04-15 07:39:08,933 | INFO     | sum of square deviations: 139912670989.24146
[2025-04-15 03:39:29] 2025-04-15 07:39:08,954 | INFO     | sum of deviations: -13549736105.655746
[2025-04-15 03:39:29] 2025-04-15 07:39:08,954 | INFO     | mean x: 1744679328.0938723
[2025-04-15 03:39:29] 2025-04-15 07:39:08,955 | INFO     | mean y: 2653509.328552803
[2025-04-15 03:39:29] 2025-04-15 07:39:08,955 | INFO     | -- intersect: 171615650.62369353
[2025-04-15 03:39:29] 2025-04-15 07:39:08,955 | INFO     | intersect: 171615650.62369353
[2025-04-15 03:39:29] 2025-04-15 07:39:08,956 | INFO     | chi2: 2.3370831142757
[2025-04-15 03:39:29] 2025-04-15 07:39:08,957 | INFO     | current chi2=2.3370831142757 (change=42.368883176214915 %)
[2025-04-15 03:39:29] 2025-04-15 07:39:08,958 | INFO     | sum of square deviations: 137193936210.71902
[2025-04-15 03:39:29] 2025-04-15 07:39:08,978 | INFO     | sum of deviations: -113966986639.74274
[2025-04-15 03:39:29] 2025-04-15 07:39:08,978 | INFO     | mean x: 1744679480.60105
[2025-04-15 03:39:29] 2025-04-15 07:39:08,979 | INFO     | mean y: 2659133.17847769
[2025-04-15 03:39:29] 2025-04-15 07:39:08,979 | INFO     | -- intersect: 1451964172.0753646
[2025-04-15 03:39:29] 2025-04-15 07:39:08,979 | INFO     | intersect: 1451964172.0753646
[2025-04-15 03:39:29] 2025-04-15 07:39:08,980 | INFO     | chi2: 1.696319784763678
[2025-04-15 03:39:29] 2025-04-15 07:39:08,981 | INFO     | current chi2=1.696319784763678 (change=27.41722472761115 %)
[2025-04-15 03:39:29] 2025-04-15 07:39:08,982 | INFO     | sum of square deviations: 134510643957.11765
[2025-04-15 03:39:29] 2025-04-15 07:39:09,003 | INFO     | sum of deviations: -122060090455.49539
[2025-04-15 03:39:29] 2025-04-15 07:39:09,003 | INFO     | mean x: 1744679633.1083224
[2025-04-15 03:39:29] 2025-04-15 07:39:09,003 | INFO     | mean y: 2659589.5548216645
[2025-04-15 03:39:29] 2025-04-15 07:39:09,003 | INFO     | -- intersect: 1585848455.2698145
[2025-04-15 03:39:29] 2025-04-15 07:39:09,004 | INFO     | intersect: 1585848455.2698145
[2025-04-15 03:39:29] 2025-04-15 07:39:09,005 | INFO     | chi2: 1.66809145091492
[2025-04-15 03:39:29] 2025-04-15 07:39:09,005 | INFO     | current chi2=1.66809145091492 (change=1.6640927083622095 %)
[2025-04-15 03:39:29] 2025-04-15 07:39:09,006 | INFO     | left removable region: 50
[2025-04-15 03:39:29] 2025-04-15 07:39:09,007 | INFO     | sum of square deviations: 118651735115.91014
[2025-04-15 03:39:29] 2025-04-15 07:39:09,025 | INFO     | sum of deviations: 15183548874.38843
[2025-04-15 03:39:29] 2025-04-15 07:39:09,026 | INFO     | mean x: 1744680212.6556473
[2025-04-15 03:39:29] 2025-04-15 07:39:09,026 | INFO     | mean y: 2664017.673553719
[2025-04-15 03:39:29] 2025-04-15 07:39:09,026 | INFO     | -- intersect: -220598096.8935622
[2025-04-15 03:39:29] 2025-04-15 07:39:09,026 | INFO     | intersect: -220598096.8935622
[2025-04-15 03:39:29] 2025-04-15 07:39:09,028 | INFO     | chi2: 0.0007686977351985442
[2025-04-15 03:39:29] 2025-04-15 07:39:09,028 | INFO     | -- intersect: -220598096.8935622
[2025-04-15 03:39:29] 2025-04-15 07:39:09,029 | INFO     | current memory leak: 0.13 B/s (using 726 data points, chi2=0.00)
[2025-04-15 03:39:29] 2025-04-15 07:39:09,030 | INFO     | ..............................
[2025-04-15 03:39:29] 2025-04-15 07:39:09,030 | INFO     | . Timing measurements:
[2025-04-15 03:39:29] 2025-04-15 07:39:09,030 | INFO     | . get job = 0 s
[2025-04-15 03:39:29] 2025-04-15 07:39:09,031 | INFO     | . initial setup = 3 s
[2025-04-15 03:39:29] 2025-04-15 07:39:09,031 | INFO     | . payload setup = 8 s
[2025-04-15 03:39:29] 2025-04-15 07:39:09,031 | INFO     | . stage-in = 0 s
[2025-04-15 03:39:29] 2025-04-15 07:39:09,031 | INFO     | . payload execution = 47671 s
[2025-04-15 03:39:29] 2025-04-15 07:39:09,031 | INFO     | . stage-out = 13 s
[2025-04-15 03:39:29] 2025-04-15 07:39:09,031 | INFO     | . log creation = 0 s
[2025-04-15 03:39:29] 2025-04-15 07:39:09,032 | INFO     | ..............................
[2025-04-15 03:39:29] 2025-04-15 07:39:09,243 | INFO     | 
[2025-04-15 03:39:29] 2025-04-15 07:39:09,251 | INFO     | job summary report
[2025-04-15 03:39:29] 2025-04-15 07:39:09,251 | INFO     | --------------------------------------------------
[2025-04-15 03:39:29] 2025-04-15 07:39:09,251 | INFO     | PanDA job id: 6602129604
[2025-04-15 03:39:29] 2025-04-15 07:39:09,251 | INFO     | task id: 44075483
[2025-04-15 03:39:29] 2025-04-15 07:39:09,251 | INFO     | errors: (none)
[2025-04-15 03:39:29] 2025-04-15 07:39:09,252 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-15 03:39:29] 2025-04-15 07:39:09,252 | INFO     | pilot state: finished 
[2025-04-15 03:39:29] 2025-04-15 07:39:09,252 | INFO     | transexitcode: 0
[2025-04-15 03:39:29] 2025-04-15 07:39:09,252 | INFO     | exeerrorcode: 0
[2025-04-15 03:39:29] 2025-04-15 07:39:09,252 | INFO     | exeerrordiag: 
[2025-04-15 03:39:29] 2025-04-15 07:39:09,253 | INFO     | exitcode: 0
[2025-04-15 03:39:29] 2025-04-15 07:39:09,253 | INFO     | exitmsg: OK
[2025-04-15 03:39:29] 2025-04-15 07:39:09,253 | INFO     | cpuconsumptiontime: 87855 s
[2025-04-15 03:39:29] 2025-04-15 07:39:09,253 | INFO     | nevents: 400
[2025-04-15 03:39:29] 2025-04-15 07:39:09,253 | INFO     | neventsw: 0
[2025-04-15 03:39:29] 2025-04-15 07:39:09,254 | INFO     | pid: 16859
[2025-04-15 03:39:29] 2025-04-15 07:39:09,254 | INFO     | pgrp: 16859
[2025-04-15 03:39:29] 2025-04-15 07:39:09,254 | INFO     | corecount: 12
[2025-04-15 03:39:29] 2025-04-15 07:39:09,254 | INFO     | event service: False
[2025-04-15 03:39:29] 2025-04-15 07:39:09,254 | INFO     | sizes: {0: 2417193, 1: 2417392, 5: 2417598, 12: 2417654, 47688: 2461679, 47689: 2461678, 47702: 2470803, 47705: 2470859, 47714: 2471029}
[2025-04-15 03:39:29] 2025-04-15 07:39:09,255 | INFO     | --------------------------------------------------
[2025-04-15 03:39:29] 2025-04-15 07:39:09,255 | INFO     | 
[2025-04-15 03:39:29] 2025-04-15 07:39:09,255 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-15 03:39:29] 2025-04-15 07:39:09,314 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-15 03:39:29] 2025-04-15 07:39:09,315 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-15 03:39:29] 2025-04-15 07:39:09,315 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-15 03:39:29] 2025-04-15 07:39:09,315 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-15 03:39:29] 2025-04-15 07:39:09,315 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-15 03:39:29] 2025-04-15 07:39:09,316 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-15 03:39:29] 2025-04-15 07:39:09,316 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-15 03:39:29] 2025-04-15 07:39:09,316 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-15 03:39:29] 2025-04-15 07:39:09,316 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-15 03:39:29] 2025-04-15 07:39:09,316 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-15 03:39:29] 2025-04-15 07:39:09,317 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-15 03:39:29] 2025-04-15 07:39:09,317 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-15 03:39:29] 2025-04-15 07:39:09,317 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-15 03:39:29] 2025-04-15 07:39:09,317 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-15 03:39:29] 2025-04-15 07:39:09,317 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-15 03:39:29] 2025-04-15 07:39:09,317 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-15 03:39:29] 2025-04-15 07:39:09,318 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-15 03:39:29] 2025-04-15 07:39:09,318 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-15 03:39:29] 2025-04-15 07:39:09,318 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-15 03:39:29] 2025-04-15 07:39:09,318 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-15 03:39:29] 2025-04-15 07:39:09,318 | INFO     | job 6602129604 has completed (purged errors)
[2025-04-15 03:39:29] 2025-04-15 07:39:09,319 | INFO     | overall cleanup function is called
[2025-04-15 03:39:29] 2025-04-15 07:39:10,331 | INFO     | --- collectZombieJob: --- 10, [16859]
[2025-04-15 03:39:29] 2025-04-15 07:39:10,332 | INFO     | zombie collector waiting for pid 16859
[2025-04-15 03:39:29] 2025-04-15 07:39:10,332 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-15 03:39:29] 2025-04-15 07:39:10,332 | INFO     | collected zombie processes
[2025-04-15 03:39:29] 2025-04-15 07:39:10,332 | INFO     | will attempt to kill all subprocesses of pid=16859
[2025-04-15 03:39:29] 2025-04-15 07:39:10,561 [wrapper] supervise_pilot (15 min periods counter: 54)
[2025-04-15 03:39:29] 2025-04-15 07:39:10,662 | INFO     | process IDs to be killed: [16859] (in reverse order)
[2025-04-15 03:39:29] 2025-04-15 07:39:10,817 | WARNING  | found no corresponding commands to process id(s)
[2025-04-15 03:39:29] 2025-04-15 07:39:10,827 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-15 03:39:29] 2025-04-15 07:39:10,833 | INFO     | did not find any defunct processes belonging to 16859
[2025-04-15 03:39:29] 2025-04-15 07:39:10,840 | INFO     | did not find any defunct processes belonging to 16859
[2025-04-15 03:39:29] 2025-04-15 07:39:10,840 | INFO     | ready for new job
[2025-04-15 03:39:29] 2025-04-15 07:39:10,841 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-15 03:39:29] 2025-04-15 07:39:10,843 | INFO     | **************************************
[2025-04-15 03:39:29] 2025-04-15 07:39:10,843 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-15 03:39:29] 2025-04-15 07:39:10,843 | INFO     | **************************************
[2025-04-15 03:39:29] 2025-04-15 07:39:10,844 | INFO     | 
[2025-04-15 03:39:29] 2025-04-15 07:39:10,845 | INFO     | architecture information:
[2025-04-15 03:39:29] 2025-04-15 07:39:10,846 | INFO     | executing command: cat /etc/os-release
[2025-04-15 03:39:29] 2025-04-15 07:39:10,927 | INFO     | cat /etc/os-release:
[2025-04-15 03:39:29] NAME="CentOS Linux"
[2025-04-15 03:39:29] VERSION="7 (Core)"
[2025-04-15 03:39:29] ID="centos"
[2025-04-15 03:39:29] ID_LIKE="rhel fedora"
[2025-04-15 03:39:29] VERSION_ID="7"
[2025-04-15 03:39:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-15 03:39:29] ANSI_COLOR="0;31"
[2025-04-15 03:39:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-15 03:39:29] HOME_URL="https://www.centos.org/"
[2025-04-15 03:39:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-15 03:39:29] 
[2025-04-15 03:39:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-15 03:39:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-15 03:39:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-15 03:39:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-15 03:39:29] 
[2025-04-15 03:39:29] 2025-04-15 07:39:10,928 | INFO     | **************************************
[2025-04-15 03:39:29] 2025-04-15 07:39:11,431 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-15 03:39:29] 2025-04-15 07:39:11,447 | INFO     | sufficient remaining disk space (29201793024 B)
[2025-04-15 03:39:29] 2025-04-15 07:39:11,448 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-15 03:39:29] 2025-04-15 07:39:11,448 | INFO     | current server update state: UPDATING_FINAL
[2025-04-15 03:39:29] 2025-04-15 07:39:11,448 | INFO     | update_server=False
[2025-04-15 03:39:29] 2025-04-15 07:39:11,448 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-15 03:39:29] 2025-04-15 07:39:11,449 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-15 03:39:29] 2025-04-15 07:39:11,552 | INFO     | all payload control threads have been joined
[2025-04-15 03:39:29] 2025-04-15 07:39:11,954 | INFO     | all job control threads have been joined
[2025-04-15 03:39:29] 2025-04-15 07:39:12,110 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-15 03:39:29] 2025-04-15 07:39:12,111 | INFO     | aborting loop
[2025-04-15 03:39:29] 2025-04-15 07:39:12,144 | INFO     | all data control threads have been joined
[2025-04-15 03:39:29] 2025-04-15 07:39:12,381 | INFO     | PID=8252 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-04-15 03:39:29] 2025-04-15 07:39:12,381 | INFO     | .. there are 4 such processes running
[2025-04-15 03:39:29] 2025-04-15 07:39:12,382 | INFO     | found 0 job(s) in 20 queues
[2025-04-15 03:39:29] 2025-04-15 07:39:12,382 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-15 03:39:29] 2025-04-15 07:39:12,382 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-15 03:39:29] 2025-04-15 07:39:12,449 | INFO     | [job] retrieve thread has finished
[2025-04-15 03:39:29] 2025-04-15 07:39:12,559 | INFO     | [payload] control thread has finished
[2025-04-15 03:39:29] 2025-04-15 07:39:12,630 | INFO     | [payload] validate_post thread has finished
[2025-04-15 03:39:29] 2025-04-15 07:39:12,761 | INFO     | [payload] execute_payloads thread has finished
[2025-04-15 03:39:29] 2025-04-15 07:39:12,767 | INFO     | [data] copytool_in thread has finished
[2025-04-15 03:39:29] 2025-04-15 07:39:12,781 | INFO     | [job] create_data_payload thread has finished
[2025-04-15 03:39:29] 2025-04-15 07:39:12,781 | INFO     | [payload] validate_pre thread has finished
[2025-04-15 03:39:29] 2025-04-15 07:39:12,784 | INFO     | [job] validate thread has finished
[2025-04-15 03:39:29] 2025-04-15 07:39:12,960 | INFO     | [job] control thread has finished
[2025-04-15 03:39:29] 2025-04-15 07:39:13,115 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-15 03:39:29] 2025-04-15 07:39:13,118 | INFO     | [job] job monitor thread has finished
[2025-04-15 03:39:29] 2025-04-15 07:39:13,150 | INFO     | [data] control thread has finished
[2025-04-15 03:39:29] 2025-04-15 07:39:13,454 | INFO     | [data] copytool_out thread has finished
[2025-04-15 03:39:29] 2025-04-15 07:39:13,785 | INFO     | [payload] failed_post thread has finished
[2025-04-15 03:39:29] 2025-04-15 07:39:14,225 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-15 03:39:29] 2025-04-15 07:39:14,747 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-15 03:39:29] 2025-04-15 07:39:15,231 | INFO     | [job] queue monitor thread has finished
[2025-04-15 03:39:29] 2025-04-15 07:39:18,755 | INFO     | [data] queue_monitor thread has finished
[2025-04-15 03:39:29] 2025-04-15 07:39:19,421 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140489406408512)>', '<ExcThread(monitor, started 140488975836928)>']
[2025-04-15 03:39:29] 2025-04-15 07:39:19,425 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-15 03:39:29] 2025-04-15 07:39:19,426 | INFO     | [monitor] control thread has ended
[2025-04-15 03:39:29] 2025-04-15 07:39:24,422 | INFO     | all workflow threads have been joined
[2025-04-15 03:39:29] 2025-04-15 07:39:24,423 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-15 03:39:29] 2025-04-15 07:39:24,439 | INFO     | traces error code: 0
[2025-04-15 03:39:29] 2025-04-15 07:39:24,439 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-15 03:39:29] 2025-04-15 07:39:26,286 [wrapper] ==== pilot stdout END ====
[2025-04-15 03:39:29] 2025-04-15 07:39:26,301 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-15 03:39:29] 2025-04-15 07:39:26,321 [wrapper] pilotpid: 8252
[2025-04-15 03:39:29] 2025-04-15 07:39:26,342 [wrapper] Pilot exit status: 0
[2025-04-15 03:39:29] 2025-04-15 07:39:26,492 [wrapper] pandaids: 6602129604
[2025-04-15 03:39:29] 2025-04-15 07:39:26,583 [wrapper] cleanup supervisor_pilot 12752 8253
[2025-04-15 03:39:29] 2025-04-15 07:39:26,587 [wrapper] Test setup, not cleaning
[2025-04-15 03:39:29] 2025-04-15 07:39:26,590 [wrapper] apfmon messages muted
[2025-04-15 03:39:29] 2025-04-15 07:39:26,593 [wrapper] ==== wrapper stdout END ====
[2025-04-15 03:39:29] 2025-04-15 07:39:26,596 [wrapper] ==== wrapper stderr END ====
[2025-04-15 03:39:29]  *** Error codes and diagnostics ***
[2025-04-15 03:39:29]     "exeErrorCode": 0,
[2025-04-15 03:39:29]     "exeErrorDiag": "",
[2025-04-15 03:39:29]     "pilotErrorCode": 0,
[2025-04-15 03:39:29]     "pilotErrorDiag": "",
[2025-04-15 03:39:29]  *** Listing of results directory ***
[2025-04-15 03:39:29] total 417812
[2025-04-15 03:39:29] -rw-r--r-- 1 boincer umatlas    495897 Apr 14 10:17 pilot3.tar.gz
[2025-04-15 03:39:29] -rw-r--r-- 1 boincer umatlas      5111 Apr 14 10:25 queuedata.json
[2025-04-15 03:39:29] -rwx------ 1 boincer umatlas     37140 Apr 14 10:26 runpilot2-wrapper.sh
[2025-04-15 03:39:29] -rw-r--r-- 1 boincer umatlas       100 Apr 14 14:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-15 03:39:29] -rwxr-xr-x 1 boincer umatlas      7986 Apr 14 14:22 run_atlas
[2025-04-15 03:39:29] -rw-r--r-- 1 boincer umatlas       105 Apr 14 14:22 job.xml
[2025-04-15 03:39:29] -rw-r--r-- 2 boincer umatlas 223053059 Apr 14 14:22 EVNT.44075481._000701.pool.root.1
[2025-04-15 03:39:29] -rw-r--r-- 2 boincer umatlas     17569 Apr 14 14:22 start_atlas.sh
[2025-04-15 03:39:29] drwxrwx--x 2 boincer umatlas      4096 Apr 14 14:22 shared
[2025-04-15 03:39:29] -rw-r--r-- 2 boincer umatlas    508894 Apr 14 14:22 input.tar.gz
[2025-04-15 03:39:29] -rw-r--r-- 1 boincer umatlas         0 Apr 14 14:22 boinc_lockfile
[2025-04-15 03:39:29] -rw-r--r-- 1 boincer umatlas      2578 Apr 14 14:23 pandaJob.out
[2025-04-15 03:39:29] -rw------- 1 boincer umatlas       424 Apr 14 14:23 setup.sh.local
[2025-04-15 03:39:29] -rw------- 1 boincer umatlas    986083 Apr 14 14:23 agis_schedconf.cvmfs.json
[2025-04-15 03:39:29] drwx------ 4 boincer umatlas      4096 Apr 14 14:23 pilot3
[2025-04-15 03:39:29] -rw------- 1 boincer umatlas 192311481 Apr 15 03:32 HITS.44075483._017728.pool.root.1
[2025-04-15 03:39:29] -rw-r--r-- 1 boincer umatlas       531 Apr 15 03:36 boinc_task_state.xml
[2025-04-15 03:39:29] -rw------- 1 boincer umatlas        96 Apr 15 03:38 pilot_heartbeat.json
[2025-04-15 03:39:29] -rw------- 1 boincer umatlas      1074 Apr 15 03:38 memory_monitor_summary.json
[2025-04-15 03:39:29] -rw-r--r-- 1 boincer umatlas      5867 Apr 15 03:38 init_data.xml
[2025-04-15 03:39:29] -rw------- 1 boincer umatlas   1603529 Apr 15 03:38 agis_ddmendpoints.agis.ALL.json
[2025-04-15 03:39:29] -rw------- 1 boincer umatlas    752713 Apr 15 03:38 log.44075483._017728.job.log.tgz.1
[2025-04-15 03:39:29] -rw------- 1 boincer umatlas      7794 Apr 15 03:39 heartbeat.json
[2025-04-15 03:39:29] -rw------- 1 boincer umatlas      4744 Apr 15 03:39 pilotlog.txt
[2025-04-15 03:39:29] -rw------- 1 boincer umatlas   3564440 Apr 15 03:39 log.44075483._017728.job.log.1
[2025-04-15 03:39:29] -rw------- 1 boincer umatlas       357 Apr 15 03:39 output.list
[2025-04-15 03:39:29] -rw-r--r-- 1 boincer umatlas       620 Apr 15 03:39 runtime_log
[2025-04-15 03:39:29] -rw------- 1 boincer umatlas   4331520 Apr 15 03:39 result.tar.gz
[2025-04-15 03:39:29] -rw------- 1 boincer umatlas       666 Apr 15 03:39 e5EMDmMwZO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmnNWLDmmAq4Um.diag
[2025-04-15 03:39:29] -rw-r--r-- 1 boincer umatlas      8192 Apr 15 03:39 boinc_mmap_file
[2025-04-15 03:39:29] -rw-r--r-- 1 boincer umatlas        28 Apr 15 03:39 wrapper_checkpoint.txt
[2025-04-15 03:39:29] -rw-r--r-- 1 boincer umatlas     11130 Apr 15 03:39 runtime_log.err
[2025-04-15 03:39:29] -rw-r--r-- 1 boincer umatlas     20963 Apr 15 03:39 stderr.txt
[2025-04-15 03:39:29] HITS file was successfully produced:
[2025-04-15 03:39:29] -rw------- 1 boincer umatlas 192311481 Apr 15 03:32 shared/HITS.pool.root.1
[2025-04-15 03:39:29]  *** Contents of shared directory: ***
[2025-04-15 03:39:29] total 410392
[2025-04-15 03:39:29] -rw-r--r-- 2 boincer umatlas 223053059 Apr 14 14:22 ATLAS.root_0
[2025-04-15 03:39:29] -rw-r--r-- 2 boincer umatlas     17569 Apr 14 14:22 start_atlas.sh
[2025-04-15 03:39:29] -rw-r--r-- 2 boincer umatlas    508894 Apr 14 14:22 input.tar.gz
[2025-04-15 03:39:29] -rw------- 1 boincer umatlas 192311481 Apr 15 03:32 HITS.pool.root.1
[2025-04-15 03:39:29] -rw------- 1 boincer umatlas   4331520 Apr 15 03:39 result.tar.gz
03:39:31 (3875): run_atlas exited; CPU time 88640.681926
03:39:31 (3875): called boinc_finish(0)

</stderr_txt>
]]>

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