Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:54:53 (34513): wrapper (7.7.26015): starting
13:54:53 (34513): wrapper: running run_atlas (--nthreads 10)
[2025-04-14 13:54:53] Arguments: --nthreads 10
[2025-04-14 13:54:53] Threads: 10
[2025-04-14 13:54:53] Checking for CVMFS
[2025-04-14 13:54:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-14 13:54:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-14 13:54:55] Running cvmfs_config stat atlas.cern.ch
[2025-04-14 13:54:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-14 13:54:56] 2.11.2.0 21608 32282 259348 144858 1 320 14391183 18432000 15000 130560 0 132236778 98.903 347904509 37371 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-14 13:54:56] CVMFS is ok
[2025-04-14 13:54:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-14 13:54:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-14 13:54:57] Further information can be found at the LHC@home message board.
[2025-04-14 13:54:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-14 13:54:57] Checking for apptainer binary...
[2025-04-14 13:54:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-14 13:54:57] Running /usr/bin/apptainer --version
[2025-04-14 13:54:57] apptainer version 1.3.2-1.el7
[2025-04-14 13:54:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-14 13:55:33] c-211-16.aglt2.org
[2025-04-14 13:55:33] apptainer works
[2025-04-14 13:55:33] Set ATHENA_PROC_NUMBER=10
[2025-04-14 13:55:33] Set ATHENA_CORE_NUMBER=10
[2025-04-14 13:55:33] Starting ATLAS job with PandaID=6602128900
[2025-04-14 13:55:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-15 07:14:09]  *** The last 200 lines of the pilot log: ***
[2025-04-15 07:14:09] 2025-04-15 11:13:39,615 | INFO     | extracted standard memory fields from prmon json
[2025-04-15 07:14:09] 2025-04-15 11:13:39,615 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-15 07:14:09] 2025-04-15 11:13:39,615 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-15 07:14:09] 2025-04-15 11:13:39,615 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-15 07:14:09] 2025-04-15 11:13:39,795 | INFO     | fitting pss+swap vs Time
[2025-04-15 07:14:09] 2025-04-15 11:13:39,797 | INFO     | sum of square deviations: 319479430276.0638
[2025-04-15 07:14:09] 2025-04-15 11:13:39,873 | INFO     | sum of deviations: 1116297021373.862
[2025-04-15 07:14:09] 2025-04-15 11:13:39,873 | INFO     | mean x: 1744684706.6792078
[2025-04-15 07:14:09] 2025-04-15 11:13:39,873 | INFO     | mean y: 2522047.326732673
[2025-04-15 07:14:09] 2025-04-15 11:13:39,874 | INFO     | -- intersect: -6093602324.810812
[2025-04-15 07:14:09] 2025-04-15 11:13:39,874 | INFO     | intersect: -6093602324.810812
[2025-04-15 07:14:09] 2025-04-15 11:13:39,883 | INFO     | chi2: 12.505684569068379
[2025-04-15 07:14:09] 2025-04-15 11:13:39,888 | INFO     | sum of square deviations: 314758443636.9455
[2025-04-15 07:14:09] 2025-04-15 11:13:40,006 | INFO     | sum of deviations: 1398308942601.8357
[2025-04-15 07:14:09] 2025-04-15 11:13:40,006 | INFO     | mean x: 1744684554.1840796
[2025-04-15 07:14:09] 2025-04-15 11:13:40,006 | INFO     | mean y: 2531147.552238806
[2025-04-15 07:14:09] 2025-04-15 11:13:40,006 | INFO     | -- intersect: -7748199812.818226
[2025-04-15 07:14:09] 2025-04-15 11:13:40,007 | INFO     | intersect: -7748199812.818226
[2025-04-15 07:14:09] 2025-04-15 11:13:40,008 | INFO     | chi2: 9.19316650615252
[2025-04-15 07:14:09] 2025-04-15 11:13:40,008 | INFO     | current chi2=9.19316650615252 (change=26.48809862923503 %)
[2025-04-15 07:14:09] 2025-04-15 11:13:40,018 | INFO     | sum of square deviations: 310083956233.77466
[2025-04-15 07:14:09] 2025-04-15 11:13:40,335 | INFO     | monitor loop #2870: job 0:6602128900 is in state 'finished'
[2025-04-15 07:14:09] 2025-04-15 11:13:40,434 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 07:14:09] 2025-04-15 11:13:40,557 | INFO     | sum of deviations: 1390085045084.6387
[2025-04-15 07:14:09] 2025-04-15 11:13:40,557 | INFO     | mean x: 1744684401.685
[2025-04-15 07:14:09] 2025-04-15 11:13:40,563 | INFO     | mean y: 2530879.256
[2025-04-15 07:14:09] 2025-04-15 11:13:40,564 | INFO     | -- intersect: -7818769276.455175
[2025-04-15 07:14:09] 2025-04-15 11:13:40,564 | INFO     | intersect: -7818769276.455175
[2025-04-15 07:14:09] 2025-04-15 11:13:40,578 | INFO     | chi2: 9.193073055120891
[2025-04-15 07:14:09] 2025-04-15 11:13:40,578 | INFO     | current chi2=9.193073055120891 (change=0.0010165271298736614 %)
[2025-04-15 07:14:09] 2025-04-15 11:13:40,584 | INFO     | right removable region: 999
[2025-04-15 07:14:09] 2025-04-15 11:13:40,607 | INFO     | sum of square deviations: 314757778491.57605
[2025-04-15 07:14:09] 2025-04-15 11:13:40,764 | INFO     | sum of deviations: 769590321695.843
[2025-04-15 07:14:09] 2025-04-15 11:13:40,773 | INFO     | mean x: 1744684859.1850746
[2025-04-15 07:14:09] 2025-04-15 11:13:40,773 | INFO     | mean y: 2533242.9094527364
[2025-04-15 07:14:09] 2025-04-15 11:13:40,773 | INFO     | -- intersect: -4263263105.230814
[2025-04-15 07:14:09] 2025-04-15 11:13:40,773 | INFO     | intersect: -4263263105.230814
[2025-04-15 07:14:09] 2025-04-15 11:13:40,775 | INFO     | chi2: 8.355628406235688
[2025-04-15 07:14:09] 2025-04-15 11:13:40,775 | INFO     | current chi2=8.355628406235688 (change=33.18535774600824 %)
[2025-04-15 07:14:09] 2025-04-15 11:13:40,785 | INFO     | sum of square deviations: 310082871769.518
[2025-04-15 07:14:09] 2025-04-15 11:13:40,870 | INFO     | sum of deviations: 530217036274.6708
[2025-04-15 07:14:09] 2025-04-15 11:13:40,870 | INFO     | mean x: 1744685011.691
[2025-04-15 07:14:09] 2025-04-15 11:13:40,870 | INFO     | mean y: 2541050.219
[2025-04-15 07:14:09] 2025-04-15 11:13:40,870 | INFO     | -- intersect: -2980731488.675802
[2025-04-15 07:14:09] 2025-04-15 11:13:40,870 | INFO     | intersect: -2980731488.675802
[2025-04-15 07:14:09] 2025-04-15 11:13:40,881 | INFO     | chi2: 6.451523998533238
[2025-04-15 07:14:09] 2025-04-15 11:13:40,881 | INFO     | current chi2=6.451523998533238 (change=22.788284915607825 %)
[2025-04-15 07:14:09] 2025-04-15 11:13:40,881 | INFO     | left removable region: 20
[2025-04-15 07:14:09] 2025-04-15 11:13:40,905 | INFO     | sum of square deviations: 290954648090.0735
[2025-04-15 07:14:09] 2025-04-15 11:13:40,991 | INFO     | sum of deviations: 409665054198.67365
[2025-04-15 07:14:09] 2025-04-15 11:13:40,991 | INFO     | mean x: 1744684981.2093973
[2025-04-15 07:14:09] 2025-04-15 11:13:40,991 | INFO     | mean y: 2563545.513789581
[2025-04-15 07:14:09] 2025-04-15 11:13:40,998 | INFO     | -- intersect: -2453958362.895428
[2025-04-15 07:14:09] 2025-04-15 11:13:40,998 | INFO     | intersect: -2453958362.895428
[2025-04-15 07:14:09] 2025-04-15 11:13:41,001 | INFO     | chi2: 0.4010705402622418
[2025-04-15 07:14:09] 2025-04-15 11:13:41,002 | INFO     | -- intersect: -2453958362.895428
[2025-04-15 07:14:09] 2025-04-15 11:13:41,004 | INFO     | current memory leak: 1.41 B/s (using 979 data points, chi2=0.40)
[2025-04-15 07:14:09] 2025-04-15 11:13:41,006 | INFO     | ..............................
[2025-04-15 07:14:09] 2025-04-15 11:13:41,006 | INFO     | . Timing measurements:
[2025-04-15 07:14:09] 2025-04-15 11:13:41,006 | INFO     | . get job = 0 s
[2025-04-15 07:14:09] 2025-04-15 11:13:41,006 | INFO     | . initial setup = 11 s
[2025-04-15 07:14:09] 2025-04-15 11:13:41,006 | INFO     | . payload setup = 130 s
[2025-04-15 07:14:09] 2025-04-15 11:13:41,006 | INFO     | . stage-in = 0 s
[2025-04-15 07:14:09] 2025-04-15 11:13:41,006 | INFO     | . payload execution = 61710 s
[2025-04-15 07:14:09] 2025-04-15 11:13:41,010 | INFO     | . stage-out = 12 s
[2025-04-15 07:14:09] 2025-04-15 11:13:41,010 | INFO     | . log creation = 3 s
[2025-04-15 07:14:09] 2025-04-15 11:13:41,010 | INFO     | ..............................
[2025-04-15 07:14:09] 2025-04-15 11:13:41,286 | INFO     | 
[2025-04-15 07:14:09] 2025-04-15 11:13:41,287 | INFO     | job summary report
[2025-04-15 07:14:09] 2025-04-15 11:13:41,287 | INFO     | --------------------------------------------------
[2025-04-15 07:14:09] 2025-04-15 11:13:41,287 | INFO     | PanDA job id: 6602128900
[2025-04-15 07:14:09] 2025-04-15 11:13:41,287 | INFO     | task id: 44075483
[2025-04-15 07:14:09] 2025-04-15 11:13:41,287 | INFO     | errors: (none)
[2025-04-15 07:14:09] 2025-04-15 11:13:41,287 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-15 07:14:09] 2025-04-15 11:13:41,287 | INFO     | pilot state: finished 
[2025-04-15 07:14:09] 2025-04-15 11:13:41,287 | INFO     | transexitcode: 0
[2025-04-15 07:14:09] 2025-04-15 11:13:41,288 | INFO     | exeerrorcode: 0
[2025-04-15 07:14:09] 2025-04-15 11:13:41,288 | INFO     | exeerrordiag: 
[2025-04-15 07:14:09] 2025-04-15 11:13:41,288 | INFO     | exitcode: 0
[2025-04-15 07:14:09] 2025-04-15 11:13:41,290 | INFO     | exitmsg: OK
[2025-04-15 07:14:09] 2025-04-15 11:13:41,291 | INFO     | cpuconsumptiontime: 58019 s
[2025-04-15 07:14:09] 2025-04-15 11:13:41,291 | INFO     | nevents: 400
[2025-04-15 07:14:09] 2025-04-15 11:13:41,293 | INFO     | neventsw: 0
[2025-04-15 07:14:09] 2025-04-15 11:13:41,293 | INFO     | pid: 32630
[2025-04-15 07:14:09] 2025-04-15 11:13:41,293 | INFO     | pgrp: 32630
[2025-04-15 07:14:09] 2025-04-15 11:13:41,294 | INFO     | corecount: 10
[2025-04-15 07:14:09] 2025-04-15 11:13:41,294 | INFO     | event service: False
[2025-04-15 07:14:09] 2025-04-15 11:13:41,294 | INFO     | sizes: {0: 2416485, 1: 2417086, 2: 2417170, 3: 2417397, 5: 2417397, 15: 2417453, 26: 2417609, 38: 2417637, 49: 2417665, 60: 2417693, 71: 2417721, 78: 2418235, 81: 
[2025-04-15 07:14:09] 2025-04-15 11:13:41,294 | INFO     | --------------------------------------------------
[2025-04-15 07:14:09] 2025-04-15 11:13:41,294 | INFO     | 
[2025-04-15 07:14:09] 2025-04-15 11:13:41,294 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-15 07:14:09] 2025-04-15 11:13:41,751 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-15 07:14:09] 2025-04-15 11:13:41,755 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-15 07:14:09] 2025-04-15 11:13:41,756 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-15 07:14:09] 2025-04-15 11:13:41,756 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-15 07:14:09] 2025-04-15 11:13:41,756 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-15 07:14:09] 2025-04-15 11:13:41,756 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-15 07:14:09] 2025-04-15 11:13:41,756 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-15 07:14:09] 2025-04-15 11:13:41,756 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-15 07:14:09] 2025-04-15 11:13:41,756 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-15 07:14:09] 2025-04-15 11:13:41,757 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-15 07:14:09] 2025-04-15 11:13:41,757 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-15 07:14:09] 2025-04-15 11:13:41,757 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-15 07:14:09] 2025-04-15 11:13:41,757 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-15 07:14:09] 2025-04-15 11:13:41,757 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-15 07:14:09] 2025-04-15 11:13:41,757 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-15 07:14:09] 2025-04-15 11:13:41,757 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-15 07:14:09] 2025-04-15 11:13:41,757 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-15 07:14:09] 2025-04-15 11:13:41,757 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-15 07:14:09] 2025-04-15 11:13:41,757 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-15 07:14:09] 2025-04-15 11:13:41,758 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-15 07:14:09] 2025-04-15 11:13:41,758 | INFO     | job 6602128900 has completed (purged errors)
[2025-04-15 07:14:09] 2025-04-15 11:13:41,758 | INFO     | overall cleanup function is called
[2025-04-15 07:14:09] 2025-04-15 11:13:42,775 | INFO     | --- collectZombieJob: --- 10, [32630]
[2025-04-15 07:14:09] 2025-04-15 11:13:42,776 | INFO     | zombie collector waiting for pid 32630
[2025-04-15 07:14:09] 2025-04-15 11:13:42,776 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-15 07:14:09] 2025-04-15 11:13:42,776 | INFO     | collected zombie processes
[2025-04-15 07:14:09] 2025-04-15 11:13:42,776 | INFO     | will attempt to kill all subprocesses of pid=32630
[2025-04-15 07:14:09] 2025-04-15 11:13:46,177 | INFO     | process IDs to be killed: [32630] (in reverse order)
[2025-04-15 07:14:09] 2025-04-15 11:13:47,434 | WARNING  | found no corresponding commands to process id(s)
[2025-04-15 07:14:09] 2025-04-15 11:13:47,434 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-15 07:14:09] 2025-04-15 11:13:47,446 | INFO     | did not find any defunct processes belonging to 32630
[2025-04-15 07:14:09] 2025-04-15 11:13:47,458 | INFO     | did not find any defunct processes belonging to 32630
[2025-04-15 07:14:09] 2025-04-15 11:13:47,458 | INFO     | ready for new job
[2025-04-15 07:14:09] 2025-04-15 11:13:47,459 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-15 07:14:09] 2025-04-15 11:13:47,462 | INFO     | **************************************
[2025-04-15 07:14:09] 2025-04-15 11:13:47,462 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-15 07:14:09] 2025-04-15 11:13:47,462 | INFO     | **************************************
[2025-04-15 07:14:09] 2025-04-15 11:13:47,462 | INFO     | 
[2025-04-15 07:14:09] 2025-04-15 11:13:47,465 | INFO     | architecture information:
[2025-04-15 07:14:09] 2025-04-15 11:13:47,473 | INFO     | executing command: cat /etc/os-release
[2025-04-15 07:14:09] 2025-04-15 11:13:47,654 | INFO     | cat /etc/os-release:
[2025-04-15 07:14:09] NAME="CentOS Linux"
[2025-04-15 07:14:09] VERSION="7 (Core)"
[2025-04-15 07:14:09] ID="centos"
[2025-04-15 07:14:09] ID_LIKE="rhel fedora"
[2025-04-15 07:14:09] VERSION_ID="7"
[2025-04-15 07:14:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-15 07:14:09] ANSI_COLOR="0;31"
[2025-04-15 07:14:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-15 07:14:09] HOME_URL="https://www.centos.org/"
[2025-04-15 07:14:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-15 07:14:09] 
[2025-04-15 07:14:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-15 07:14:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-15 07:14:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-15 07:14:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-15 07:14:09] 
[2025-04-15 07:14:09] 2025-04-15 11:13:47,655 | INFO     | **************************************
[2025-04-15 07:14:09] 2025-04-15 11:13:48,158 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-15 07:14:09] 2025-04-15 11:13:48,373 | INFO     | sufficient remaining disk space (57019465728 B)
[2025-04-15 07:14:09] 2025-04-15 11:13:48,374 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-15 07:14:09] 2025-04-15 11:13:48,374 | INFO     | current server update state: UPDATING_FINAL
[2025-04-15 07:14:09] 2025-04-15 11:13:48,374 | INFO     | update_server=False
[2025-04-15 07:14:09] 2025-04-15 11:13:48,374 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-15 07:14:09] 2025-04-15 11:13:48,390 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-15 07:14:09] 2025-04-15 11:13:48,390 | INFO     | found 0 job(s) in 20 queues
[2025-04-15 07:14:09] 2025-04-15 11:13:48,390 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-15 07:14:09] 2025-04-15 11:13:48,390 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-15 07:14:09] 2025-04-15 11:13:48,469 | INFO     | all data control threads have been joined
[2025-04-15 07:14:09] 2025-04-15 11:13:48,638 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-15 07:14:09] 2025-04-15 11:13:48,744 | INFO     | all job control threads have been joined
[2025-04-15 07:14:09] 2025-04-15 11:13:49,144 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-15 07:14:09] 2025-04-15 11:13:49,144 | INFO     | aborting loop
[2025-04-15 07:14:09] 2025-04-15 11:13:49,408 | INFO     | [job] retrieve thread has finished
[2025-04-15 07:14:09] 2025-04-15 11:13:49,475 | INFO     | [data] control thread has finished
[2025-04-15 07:14:09] 2025-04-15 11:13:49,745 | INFO     | all payload control threads have been joined
[2025-04-15 07:14:09] 2025-04-15 11:13:49,755 | INFO     | [job] control thread has finished
[2025-04-15 07:14:09] 2025-04-15 11:13:49,846 | INFO     | [payload] failed_post thread has finished
[2025-04-15 07:14:09] 2025-04-15 11:13:49,890 | INFO     | [job] create_data_payload thread has finished
[2025-04-15 07:14:09] 2025-04-15 11:13:49,903 | INFO     | [data] copytool_in thread has finished
[2025-04-15 07:14:09] 2025-04-15 11:13:49,909 | INFO     | [payload] execute_payloads thread has finished
[2025-04-15 07:14:09] 2025-04-15 11:13:49,921 | INFO     | [payload] validate_pre thread has finished
[2025-04-15 07:14:09] 2025-04-15 11:13:49,929 | INFO     | [job] validate thread has finished
[2025-04-15 07:14:09] 2025-04-15 11:13:50,151 | INFO     | [job] job monitor thread has finished
[2025-04-15 07:14:09] 2025-04-15 11:13:50,240 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-15 07:14:09] 2025-04-15 11:13:50,247 | INFO     | [payload] validate_post thread has finished
[2025-04-15 07:14:09] 2025-04-15 11:13:50,468 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-15 07:14:09] 2025-04-15 11:13:50,646 | INFO     | [data] copytool_out thread has finished
[2025-04-15 07:14:09] 2025-04-15 11:13:50,751 | INFO     | [payload] control thread has finished
[2025-04-15 07:14:09] 2025-04-15 11:13:51,049 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-15 07:14:09] 2025-04-15 11:13:51,488 | INFO     | [job] queue monitor thread has finished
[2025-04-15 07:14:09] 2025-04-15 11:13:55,064 | INFO     | [data] queue_monitor thread has finished
[2025-04-15 07:14:09] 2025-04-15 11:13:56,853 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139883442587456)>', '<ExcThread(monitor, started 139882924078848)>']
[2025-04-15 07:14:09] 2025-04-15 11:13:57,469 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-15 07:14:09] 2025-04-15 11:13:57,470 | INFO     | [monitor] control thread has ended
[2025-04-15 07:14:09] 2025-04-15 11:14:01,905 | INFO     | all workflow threads have been joined
[2025-04-15 07:14:09] 2025-04-15 11:14:01,905 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-15 07:14:09] 2025-04-15 11:14:01,905 | INFO     | traces error code: 0
[2025-04-15 07:14:09] 2025-04-15 11:14:01,905 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-15 07:14:09] 2025-04-15 11:14:05,049 [wrapper] ==== pilot stdout END ====
[2025-04-15 07:14:09] 2025-04-15 11:14:05,088 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-15 07:14:09] 2025-04-15 11:14:05,140 [wrapper] pilotpid: 19797
[2025-04-15 07:14:09] 2025-04-15 11:14:05,183 [wrapper] Pilot exit status: 0
[2025-04-15 07:14:09] 2025-04-15 11:14:05,517 [wrapper] pandaids: 6602128900
[2025-04-15 07:14:09] 2025-04-15 11:14:06,192 [wrapper] cleanup supervisor_pilot  6155 19798
[2025-04-15 07:14:09] 2025-04-15 11:14:06,238 [wrapper] Test setup, not cleaning
[2025-04-15 07:14:09] 2025-04-15 11:14:06,328 [wrapper] apfmon messages muted
[2025-04-15 07:14:09] 2025-04-15 11:14:06,364 [wrapper] ==== wrapper stdout END ====
[2025-04-15 07:14:09] 2025-04-15 11:14:06,417 [wrapper] ==== wrapper stderr END ====
[2025-04-15 07:14:09]  *** Error codes and diagnostics ***
[2025-04-15 07:14:09]     "exeErrorCode": 0,
[2025-04-15 07:14:09]     "exeErrorDiag": "",
[2025-04-15 07:14:09]     "pilotErrorCode": 0,
[2025-04-15 07:14:09]     "pilotErrorDiag": "",
[2025-04-15 07:14:09]  *** Listing of results directory ***
[2025-04-15 07:14:09] total 425060
[2025-04-15 07:14:09] -rw-r--r-- 1 boincer umatlas      5111 Apr 14 09:53 queuedata.json
[2025-04-15 07:14:09] -rwx------ 1 boincer umatlas     37140 Apr 14 09:54 runpilot2-wrapper.sh
[2025-04-15 07:14:09] -rw-r--r-- 1 boincer umatlas    495897 Apr 14 09:54 pilot3.tar.gz
[2025-04-15 07:14:09] -rw-r--r-- 1 boincer umatlas       100 Apr 14 13:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-15 07:14:09] -rwxr-xr-x 1 boincer umatlas      7986 Apr 14 13:54 run_atlas
[2025-04-15 07:14:09] -rw-r--r-- 1 boincer umatlas       105 Apr 14 13:54 job.xml
[2025-04-15 07:14:09] -rw-r--r-- 2 boincer umatlas 225441912 Apr 14 13:54 EVNT.44075481._000692.pool.root.1
[2025-04-15 07:14:09] -rw-r--r-- 2 boincer umatlas     17569 Apr 14 13:54 start_atlas.sh
[2025-04-15 07:14:09] drwxrwx--x 2 boincer umatlas      4096 Apr 14 13:54 shared
[2025-04-15 07:14:09] -rw-r--r-- 2 boincer umatlas    508887 Apr 14 13:54 input.tar.gz
[2025-04-15 07:14:09] -rw-r--r-- 1 boincer umatlas         0 Apr 14 13:54 boinc_lockfile
[2025-04-15 07:14:09] -rw-r--r-- 1 boincer umatlas      2577 Apr 14 13:55 pandaJob.out
[2025-04-15 07:14:09] -rw------- 1 boincer umatlas       467 Apr 14 13:56 setup.sh.local
[2025-04-15 07:14:09] -rw------- 1 boincer umatlas    986083 Apr 14 13:58 agis_schedconf.cvmfs.json
[2025-04-15 07:14:09] drwx------ 4 boincer umatlas      4096 Apr 14 13:58 pilot3
[2025-04-15 07:14:09] -rw------- 1 boincer umatlas 196165738 Apr 15 07:06 HITS.44075483._017502.pool.root.1
[2025-04-15 07:14:09] -rw-r--r-- 1 boincer umatlas       531 Apr 15 07:07 boinc_task_state.xml
[2025-04-15 07:14:09] -rw-r--r-- 1 boincer umatlas      6229 Apr 15 07:10 init_data.xml
[2025-04-15 07:14:09] -rw------- 1 boincer umatlas      1060 Apr 15 07:11 memory_monitor_summary.json
[2025-04-15 07:14:09] -rw------- 1 boincer umatlas   1603529 Apr 15 07:12 agis_ddmendpoints.agis.ALL.json
[2025-04-15 07:14:09] -rw------- 1 boincer umatlas    781742 Apr 15 07:12 log.44075483._017502.job.log.tgz.1
[2025-04-15 07:14:09] -rw------- 1 boincer umatlas      7760 Apr 15 07:13 heartbeat.json
[2025-04-15 07:14:09] -rw------- 1 boincer umatlas        95 Apr 15 07:13 pilot_heartbeat.json
[2025-04-15 07:14:09] -rw-r--r-- 1 boincer umatlas      8192 Apr 15 07:13 boinc_mmap_file
[2025-04-15 07:14:09] -rw-r--r-- 1 boincer umatlas        28 Apr 15 07:13 wrapper_checkpoint.txt
[2025-04-15 07:14:09] -rw------- 1 boincer umatlas      4476 Apr 15 07:14 pilotlog.txt
[2025-04-15 07:14:09] -rw------- 1 boincer umatlas   4120636 Apr 15 07:14 log.44075483._017502.job.log.1
[2025-04-15 07:14:09] -rw------- 1 boincer umatlas       357 Apr 15 07:14 output.list
[2025-04-15 07:14:09] -rw-r--r-- 1 boincer umatlas       620 Apr 15 07:14 runtime_log
[2025-04-15 07:14:09] -rw------- 1 boincer umatlas   4925440 Apr 15 07:14 result.tar.gz
[2025-04-15 07:14:09] -rw-r--r-- 1 boincer umatlas     11421 Apr 15 07:14 runtime_log.err
[2025-04-15 07:14:09] -rw------- 1 boincer umatlas       665 Apr 15 07:14 fz9KDmLRZO7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmSP0KDmkiO6Km.diag
[2025-04-15 07:14:09] -rw-r--r-- 1 boincer umatlas     20943 Apr 15 07:14 stderr.txt
[2025-04-15 07:14:09] HITS file was successfully produced:
[2025-04-15 07:14:09] -rw------- 1 boincer umatlas 196165738 Apr 15 07:06 shared/HITS.pool.root.1
[2025-04-15 07:14:09]  *** Contents of shared directory: ***
[2025-04-15 07:14:09] total 417068
[2025-04-15 07:14:09] -rw-r--r-- 2 boincer umatlas 225441912 Apr 14 13:54 ATLAS.root_0
[2025-04-15 07:14:09] -rw-r--r-- 2 boincer umatlas     17569 Apr 14 13:54 start_atlas.sh
[2025-04-15 07:14:09] -rw-r--r-- 2 boincer umatlas    508887 Apr 14 13:54 input.tar.gz
[2025-04-15 07:14:09] -rw------- 1 boincer umatlas 196165738 Apr 15 07:06 HITS.pool.root.1
[2025-04-15 07:14:09] -rw------- 1 boincer umatlas   4925440 Apr 15 07:14 result.tar.gz
07:14:10 (34513): run_atlas exited; CPU time 60270.433806
07:14:10 (34513): called boinc_finish(0)

</stderr_txt>
]]>

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