Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:48:32 (2352): wrapper (7.7.26015): starting
12:48:32 (2352): wrapper: running run_atlas (--nthreads 8)
[2025-04-14 12:48:32] Arguments: --nthreads 8
[2025-04-14 12:48:32] Threads: 8
[2025-04-14 12:48:32] Checking for CVMFS
[2025-04-14 12:48:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-14 12:48:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-14 12:48:33] Running cvmfs_config stat atlas.cern.ch
[2025-04-14 12:48:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-14 12:48:33] 2.11.2.0 3761 244248 230168 144857 3 58 14730921 20275200 917 130560 0 36675320 99.995 5474604 58624 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-14 12:48:33] CVMFS is ok
[2025-04-14 12:48:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-14 12:48:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-14 12:48:33] Further information can be found at the LHC@home message board.
[2025-04-14 12:48:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-14 12:48:33] Checking for apptainer binary...
[2025-04-14 12:48:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-14 12:48:33] Running /usr/bin/apptainer --version
[2025-04-14 12:48:33] apptainer version 1.3.2-1.el7
[2025-04-14 12:48:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-14 12:48:34] c-205-36.aglt2.org
[2025-04-14 12:48:34] apptainer works
[2025-04-14 12:48:34] Set ATHENA_PROC_NUMBER=8
[2025-04-14 12:48:34] Set ATHENA_CORE_NUMBER=8
[2025-04-14 12:48:34] Starting ATLAS job with PandaID=6602116758
[2025-04-14 12:48:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-14 14:03:35]  *** The last 200 lines of the pilot log: ***
[2025-04-14 14:03:35]  is_altstaged=None
[2025-04-14 14:03:35]  is_tar=False
[2025-04-14 14:03:35]  lfn=log.44075483._013005.job.log.tgz.1
[2025-04-14 14:03:35]  mtime=0
[2025-04-14 14:03:35]  protocol_id=None
[2025-04-14 14:03:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-14 14:03:35]  replicas=None
[2025-04-14 14:03:35]  scope=mc23_13p6TeV
[2025-04-14 14:03:35]  status=None
[2025-04-14 14:03:35]  status_code=0
[2025-04-14 14:03:35]  storage_token=
[2025-04-14 14:03:35]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6602116758/log.44075483._013005.job.log.tgz.1
[2025-04-14 14:03:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a4/5f/log.44075483._013005.job.log.tgz.1
[2025-04-14 14:03:35]  workdir=None
[2025-04-14 14:03:35] ]
[2025-04-14 14:03:35] 2025-04-14 18:03:08,114 | INFO     | transferring file log.44075483._013005.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6602116758/log.44075483._013005.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-14 14:03:35] 2025-04-14 18:03:08,114 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6602116758/log.44075483._013005.job.log.tgz.1 /tmp/boinchome/slots/1/log.44075483._013005.job
[2025-04-14 14:03:35] 2025-04-14 18:03:08,136 | INFO     | adding to output.list: log.44075483._013005.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a4/5f/log.44075483._013005.job.log.tg
[2025-04-14 14:03:35] 2025-04-14 18:03:08,136 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-14 14:03:35] 2025-04-14 18:03:08,136 | INFO     | summary of transferred files:
[2025-04-14 14:03:35] 2025-04-14 18:03:08,136 | INFO     |  -- lfn=log.44075483._013005.job.log.tgz.1, status_code=0, status=transferred
[2025-04-14 14:03:35] 2025-04-14 18:03:08,137 | INFO     | stage-out finished correctly
[2025-04-14 14:03:35] 2025-04-14 18:03:08,745 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-14 14:03:35] 2025-04-14 18:03:08,957 | INFO     | monitor loop #336: job 0:6602116758 is in state 'finished'
[2025-04-14 14:03:35] 2025-04-14 18:03:08,957 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-14 14:03:35] 2025-04-14 18:03:09,032 | INFO     | job 6602116758 has state=finished
[2025-04-14 14:03:35] 2025-04-14 18:03:09,033 | INFO     | preparing for final server update for job 6602116758 in state='finished'
[2025-04-14 14:03:35] 2025-04-14 18:03:09,033 | INFO     | this job has now completed (state=finished)
[2025-04-14 14:03:35] 2025-04-14 18:03:09,033 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-14 14:03:35] 2025-04-14 18:03:09,033 | INFO     | log transfer has been attempted: DONE
[2025-04-14 14:03:35] 2025-04-14 18:03:09,034 | INFO     | job 6602116758 has finished - writing final server update
[2025-04-14 14:03:35] 2025-04-14 18:03:09,034 | INFO     | total number of processed events: 400 (read)
[2025-04-14 14:03:35] 2025-04-14 18:03:09,036 | INFO     | executing command: lscpu
[2025-04-14 14:03:35] 2025-04-14 18:03:09,069 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-14 14:03:35] 2025-04-14 18:03:11,459 | INFO     | monitor loop #337: job 0:6602116758 is in state 'finished'
[2025-04-14 14:03:35] 2025-04-14 18:03:11,460 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-14 14:03:35] 2025-04-14 18:03:13,962 | INFO     | monitor loop #338: job 0:6602116758 is in state 'finished'
[2025-04-14 14:03:35] 2025-04-14 18:03:13,962 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-14 14:03:35] 2025-04-14 18:03:14,841 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-14 14:03:35] 2025-04-14 18:03:14,842 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6602116758/memory_monitor_summary.json (trf name=prmon)
[2025-04-14 14:03:35] 2025-04-14 18:03:14,843 | INFO     | extracted standard info from prmon json
[2025-04-14 14:03:35] 2025-04-14 18:03:14,843 | INFO     | extracted standard memory fields from prmon json
[2025-04-14 14:03:35] 2025-04-14 18:03:14,843 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-14 14:03:35] 2025-04-14 18:03:14,844 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-14 14:03:35] 2025-04-14 18:03:14,844 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-14 14:03:35] 2025-04-14 18:03:14,846 | INFO     | fitting pss+swap vs Time
[2025-04-14 14:03:35] 2025-04-14 18:03:14,847 | INFO     | sum of square deviations: 89127252.5
[2025-04-14 14:03:35] 2025-04-14 18:03:14,847 | INFO     | sum of deviations: 12168561057.499998
[2025-04-14 14:03:35] 2025-04-14 18:03:14,847 | INFO     | mean x: 1744651637.5
[2025-04-14 14:03:35] 2025-04-14 18:03:14,848 | INFO     | mean y: 2432282.287878788
[2025-04-14 14:03:35] 2025-04-14 18:03:14,848 | INFO     | -- intersect: -238195193914.9979
[2025-04-14 14:03:35] 2025-04-14 18:03:14,848 | INFO     | intersect: -238195193914.9979
[2025-04-14 14:03:35] 2025-04-14 18:03:14,848 | INFO     | chi2: 1.621959152964129
[2025-04-14 14:03:35] 2025-04-14 18:03:14,848 | INFO     | -- intersect: -238195193914.9979
[2025-04-14 14:03:35] 2025-04-14 18:03:14,848 | INFO     | current memory leak: 136.53 B/s (using 66 data points, chi2=1.62)
[2025-04-14 14:03:35] 2025-04-14 18:03:14,849 | INFO     | ..............................
[2025-04-14 14:03:35] 2025-04-14 18:03:14,849 | INFO     | . Timing measurements:
[2025-04-14 14:03:35] 2025-04-14 18:03:14,849 | INFO     | . get job = 0 s
[2025-04-14 14:03:35] 2025-04-14 18:03:14,849 | INFO     | . initial setup = 2 s
[2025-04-14 14:03:35] 2025-04-14 18:03:14,849 | INFO     | . payload setup = 6 s
[2025-04-14 14:03:35] 2025-04-14 18:03:14,850 | INFO     | . stage-in = 0 s
[2025-04-14 14:03:35] 2025-04-14 18:03:14,850 | INFO     | . payload execution = 4437 s
[2025-04-14 14:03:35] 2025-04-14 18:03:14,850 | INFO     | . stage-out = 0 s
[2025-04-14 14:03:35] 2025-04-14 18:03:14,850 | INFO     | . log creation = 0 s
[2025-04-14 14:03:35] 2025-04-14 18:03:14,850 | INFO     | ..............................
[2025-04-14 14:03:35] 2025-04-14 18:03:14,937 | INFO     | 
[2025-04-14 14:03:35] 2025-04-14 18:03:14,937 | INFO     | job summary report
[2025-04-14 14:03:35] 2025-04-14 18:03:14,937 | INFO     | --------------------------------------------------
[2025-04-14 14:03:35] 2025-04-14 18:03:14,937 | INFO     | PanDA job id: 6602116758
[2025-04-14 14:03:35] 2025-04-14 18:03:14,937 | INFO     | task id: 44075483
[2025-04-14 14:03:35] 2025-04-14 18:03:14,937 | INFO     | errors: (none)
[2025-04-14 14:03:35] 2025-04-14 18:03:14,937 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-14 14:03:35] 2025-04-14 18:03:14,938 | INFO     | pilot state: finished 
[2025-04-14 14:03:35] 2025-04-14 18:03:14,938 | INFO     | transexitcode: 0
[2025-04-14 14:03:35] 2025-04-14 18:03:14,938 | INFO     | exeerrorcode: 0
[2025-04-14 14:03:35] 2025-04-14 18:03:14,938 | INFO     | exeerrordiag: 
[2025-04-14 14:03:35] 2025-04-14 18:03:14,938 | INFO     | exitcode: 0
[2025-04-14 14:03:35] 2025-04-14 18:03:14,938 | INFO     | exitmsg: OK
[2025-04-14 14:03:35] 2025-04-14 18:03:14,938 | INFO     | cpuconsumptiontime: 28538 s
[2025-04-14 14:03:35] 2025-04-14 18:03:14,938 | INFO     | nevents: 400
[2025-04-14 14:03:35] 2025-04-14 18:03:14,938 | INFO     | neventsw: 0
[2025-04-14 14:03:35] 2025-04-14 18:03:14,939 | INFO     | pid: 12456
[2025-04-14 14:03:35] 2025-04-14 18:03:14,939 | INFO     | pgrp: 12456
[2025-04-14 14:03:35] 2025-04-14 18:03:14,939 | INFO     | corecount: 8
[2025-04-14 14:03:35] 2025-04-14 18:03:14,939 | INFO     | event service: False
[2025-04-14 14:03:35] 2025-04-14 18:03:14,939 | INFO     | sizes: {0: 2417192, 1: 2417391, 5: 2417597, 11: 2417653, 4446: 2443693, 4447: 2452634, 4448: 2452818, 4454: 2452988}
[2025-04-14 14:03:35] 2025-04-14 18:03:14,939 | INFO     | --------------------------------------------------
[2025-04-14 14:03:35] 2025-04-14 18:03:14,939 | INFO     | 
[2025-04-14 14:03:35] 2025-04-14 18:03:14,939 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-14 14:03:35] 2025-04-14 18:03:14,963 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-14 14:03:35] 2025-04-14 18:03:14,963 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-14 14:03:35] 2025-04-14 18:03:14,964 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-14 14:03:35] 2025-04-14 18:03:14,964 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-14 14:03:35] 2025-04-14 18:03:14,964 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-14 14:03:35] 2025-04-14 18:03:14,964 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-14 14:03:35] 2025-04-14 18:03:14,964 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-14 14:03:35] 2025-04-14 18:03:14,964 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-14 14:03:35] 2025-04-14 18:03:14,964 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-14 14:03:35] 2025-04-14 18:03:14,964 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-14 14:03:35] 2025-04-14 18:03:14,964 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-14 14:03:35] 2025-04-14 18:03:14,965 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-14 14:03:35] 2025-04-14 18:03:14,965 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-14 14:03:35] 2025-04-14 18:03:14,965 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-14 14:03:35] 2025-04-14 18:03:14,965 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-14 14:03:35] 2025-04-14 18:03:14,965 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-14 14:03:35] 2025-04-14 18:03:14,965 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-14 14:03:35] 2025-04-14 18:03:14,965 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-14 14:03:35] 2025-04-14 18:03:14,965 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-14 14:03:35] 2025-04-14 18:03:14,966 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-14 14:03:35] 2025-04-14 18:03:14,966 | INFO     | job 6602116758 has completed (purged errors)
[2025-04-14 14:03:35] 2025-04-14 18:03:14,966 | INFO     | overall cleanup function is called
[2025-04-14 14:03:35] 2025-04-14 18:03:15,974 | INFO     | --- collectZombieJob: --- 10, [12456]
[2025-04-14 14:03:35] 2025-04-14 18:03:15,975 | INFO     | zombie collector waiting for pid 12456
[2025-04-14 14:03:35] 2025-04-14 18:03:15,975 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-14 14:03:35] 2025-04-14 18:03:15,975 | INFO     | collected zombie processes
[2025-04-14 14:03:35] 2025-04-14 18:03:15,975 | INFO     | will attempt to kill all subprocesses of pid=12456
[2025-04-14 14:03:35] 2025-04-14 18:03:16,094 | INFO     | process IDs to be killed: [12456] (in reverse order)
[2025-04-14 14:03:35] 2025-04-14 18:03:16,156 | WARNING  | found no corresponding commands to process id(s)
[2025-04-14 14:03:35] 2025-04-14 18:03:16,157 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-14 14:03:35] 2025-04-14 18:03:16,161 | INFO     | did not find any defunct processes belonging to 12456
[2025-04-14 14:03:35] 2025-04-14 18:03:16,164 | INFO     | did not find any defunct processes belonging to 12456
[2025-04-14 14:03:35] 2025-04-14 18:03:16,164 | INFO     | ready for new job
[2025-04-14 14:03:35] 2025-04-14 18:03:16,165 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-14 14:03:35] 2025-04-14 18:03:16,166 | INFO     | **************************************
[2025-04-14 14:03:35] 2025-04-14 18:03:16,166 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-14 14:03:35] 2025-04-14 18:03:16,167 | INFO     | **************************************
[2025-04-14 14:03:35] 2025-04-14 18:03:16,167 | INFO     | 
[2025-04-14 14:03:35] 2025-04-14 18:03:16,168 | INFO     | architecture information:
[2025-04-14 14:03:35] 2025-04-14 18:03:16,168 | INFO     | executing command: cat /etc/os-release
[2025-04-14 14:03:35] 2025-04-14 18:03:16,185 | INFO     | cat /etc/os-release:
[2025-04-14 14:03:35] NAME="CentOS Linux"
[2025-04-14 14:03:35] VERSION="7 (Core)"
[2025-04-14 14:03:35] ID="centos"
[2025-04-14 14:03:35] ID_LIKE="rhel fedora"
[2025-04-14 14:03:35] VERSION_ID="7"
[2025-04-14 14:03:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-14 14:03:35] ANSI_COLOR="0;31"
[2025-04-14 14:03:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-14 14:03:35] HOME_URL="https://www.centos.org/"
[2025-04-14 14:03:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-14 14:03:35] 
[2025-04-14 14:03:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-14 14:03:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-14 14:03:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-14 14:03:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-14 14:03:35] 
[2025-04-14 14:03:35] 2025-04-14 18:03:16,185 | INFO     | **************************************
[2025-04-14 14:03:35] 2025-04-14 18:03:16,688 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-14 14:03:35] 2025-04-14 18:03:16,708 | INFO     | sufficient remaining disk space (32727105536 B)
[2025-04-14 14:03:35] 2025-04-14 18:03:16,708 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-14 14:03:35] 2025-04-14 18:03:16,709 | INFO     | current server update state: UPDATING_FINAL
[2025-04-14 14:03:35] 2025-04-14 18:03:16,709 | INFO     | update_server=False
[2025-04-14 14:03:35] 2025-04-14 18:03:16,709 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-14 14:03:35] 2025-04-14 18:03:16,709 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-14 14:03:35] 2025-04-14 18:03:16,710 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-14 14:03:35] 2025-04-14 18:03:17,412 | INFO     | all job control threads have been joined
[2025-04-14 14:03:35] 2025-04-14 18:03:17,430 | INFO     | PID=6066 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-04-14 14:03:35] 2025-04-14 18:03:17,430 | INFO     | .. there are 2 such processes running
[2025-04-14 14:03:35] 2025-04-14 18:03:17,430 | INFO     | found 0 job(s) in 20 queues
[2025-04-14 14:03:35] 2025-04-14 18:03:17,431 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-14 14:03:35] 2025-04-14 18:03:17,431 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-14 14:03:35] 2025-04-14 18:03:17,471 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-14 14:03:35] 2025-04-14 18:03:17,471 | INFO     | aborting loop
[2025-04-14 14:03:35] 2025-04-14 18:03:17,715 | INFO     | [job] retrieve thread has finished
[2025-04-14 14:03:35] 2025-04-14 18:03:17,715 | INFO     | [job] queue monitor thread has finished
[2025-04-14 14:03:35] 2025-04-14 18:03:17,779 | INFO     | all data control threads have been joined
[2025-04-14 14:03:35] 2025-04-14 18:03:17,809 | INFO     | [data] copytool_in thread has finished
[2025-04-14 14:03:35] 2025-04-14 18:03:17,813 | INFO     | [payload] validate_pre thread has finished
[2025-04-14 14:03:35] 2025-04-14 18:03:17,961 | INFO     | all payload control threads have been joined
[2025-04-14 14:03:35] 2025-04-14 18:03:18,090 | INFO     | [payload] validate_post thread has finished
[2025-04-14 14:03:35] 2025-04-14 18:03:18,418 | INFO     | [job] control thread has finished
[2025-04-14 14:03:35] 2025-04-14 18:03:18,460 | INFO     | [payload] failed_post thread has finished
[2025-04-14 14:03:35] 2025-04-14 18:03:18,477 | INFO     | [job] job monitor thread has finished
[2025-04-14 14:03:35] 2025-04-14 18:03:18,711 | INFO     | [data] copytool_out thread has finished
[2025-04-14 14:03:35] 2025-04-14 18:03:18,756 | INFO     | [job] validate thread has finished
[2025-04-14 14:03:35] 2025-04-14 18:03:18,786 | INFO     | [data] control thread has finished
[2025-04-14 14:03:35] 2025-04-14 18:03:18,911 | INFO     | [payload] execute_payloads thread has finished
[2025-04-14 14:03:35] 2025-04-14 18:03:18,961 | INFO     | [payload] control thread has finished
[2025-04-14 14:03:35] 2025-04-14 18:03:19,046 | INFO     | [job] create_data_payload thread has finished
[2025-04-14 14:03:35] 2025-04-14 18:03:19,337 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-14 14:03:35] 2025-04-14 18:03:23,343 | INFO     | [data] queue_monitor thread has finished
[2025-04-14 14:03:35] 2025-04-14 18:03:27,447 | INFO     | job.realtimelogging is not enabled
[2025-04-14 14:03:35] 2025-04-14 18:03:28,452 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-14 14:03:35] 2025-04-14 18:03:30,444 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140641316304704)>', '<ExcThread(monitor, started 140641027737344)>']
[2025-04-14 14:03:35] 2025-04-14 18:03:30,478 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-14 14:03:35] 2025-04-14 18:03:30,478 | INFO     | [monitor] control thread has ended
[2025-04-14 14:03:35] 2025-04-14 18:03:35,466 | INFO     | all workflow threads have been joined
[2025-04-14 14:03:35] 2025-04-14 18:03:35,466 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-14 14:03:35] 2025-04-14 18:03:35,467 | INFO     | traces error code: 0
[2025-04-14 14:03:35] 2025-04-14 18:03:35,467 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-14 14:03:35] 2025-04-14 18:03:35,593 [wrapper] ==== pilot stdout END ====
[2025-04-14 14:03:35] 2025-04-14 18:03:35,596 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-14 14:03:35] 2025-04-14 18:03:35,599 [wrapper] pilotpid: 6066
[2025-04-14 14:03:35] 2025-04-14 18:03:35,602 [wrapper] Pilot exit status: 0
[2025-04-14 14:03:35] 2025-04-14 18:03:35,614 [wrapper] pandaids: 6602116758
[2025-04-14 14:03:35] 2025-04-14 18:03:35,657 [wrapper] cleanup supervisor_pilot 23871 6067
[2025-04-14 14:03:35] 2025-04-14 18:03:35,661 [wrapper] Test setup, not cleaning
[2025-04-14 14:03:35] 2025-04-14 18:03:35,665 [wrapper] apfmon messages muted
[2025-04-14 14:03:35] 2025-04-14 18:03:35,668 [wrapper] ==== wrapper stdout END ====
[2025-04-14 14:03:35] 2025-04-14 18:03:35,672 [wrapper] ==== wrapper stderr END ====
[2025-04-14 14:03:35]  *** Error codes and diagnostics ***
[2025-04-14 14:03:35]     "exeErrorCode": 0,
[2025-04-14 14:03:35]     "exeErrorDiag": "",
[2025-04-14 14:03:35]     "pilotErrorCode": 0,
[2025-04-14 14:03:35]     "pilotErrorDiag": "",
[2025-04-14 14:03:35]  *** Listing of results directory ***
[2025-04-14 14:03:35] total 414468
[2025-04-14 14:03:35] -rw-r--r-- 1 boincer umatlas    495897 Apr 14 00:48 pilot3.tar.gz
[2025-04-14 14:03:35] -rwx------ 1 boincer umatlas     37140 Apr 14 00:59 runpilot2-wrapper.sh
[2025-04-14 14:03:35] -rw-r--r-- 1 boincer umatlas      5111 Apr 14 00:59 queuedata.json
[2025-04-14 14:03:35] -rw-r--r-- 1 boincer umatlas       100 Apr 14 12:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-14 14:03:35] -rwxr-xr-x 1 boincer umatlas      7986 Apr 14 12:48 run_atlas
[2025-04-14 14:03:35] -rw-r--r-- 1 boincer umatlas       105 Apr 14 12:48 job.xml
[2025-04-14 14:03:35] -rw-r--r-- 2 boincer umatlas 226723909 Apr 14 12:48 EVNT.44075481._000512.pool.root.1
[2025-04-14 14:03:35] -rw-r--r-- 2 boincer umatlas     17569 Apr 14 12:48 start_atlas.sh
[2025-04-14 14:03:35] drwxrwx--x 2 boincer umatlas      4096 Apr 14 12:48 shared
[2025-04-14 14:03:35] -rw-r--r-- 2 boincer umatlas    508892 Apr 14 12:48 input.tar.gz
[2025-04-14 14:03:35] -rw-r--r-- 1 boincer umatlas         0 Apr 14 12:48 boinc_lockfile
[2025-04-14 14:03:35] -rw-r--r-- 1 boincer umatlas      2577 Apr 14 12:48 pandaJob.out
[2025-04-14 14:03:35] -rw------- 1 boincer umatlas       424 Apr 14 12:48 setup.sh.local
[2025-04-14 14:03:35] -rw------- 1 boincer umatlas    986099 Apr 14 12:48 agis_schedconf.cvmfs.json
[2025-04-14 14:03:35] -rw------- 1 boincer umatlas   1603529 Apr 14 12:48 agis_ddmendpoints.agis.ALL.json
[2025-04-14 14:03:35] drwx------ 4 boincer umatlas      4096 Apr 14 12:48 pilot3
[2025-04-14 14:03:35] -rw-r--r-- 1 boincer umatlas      6050 Apr 14 14:00 init_data.xml
[2025-04-14 14:03:35] -rw------- 1 boincer umatlas        95 Apr 14 14:02 pilot_heartbeat.json
[2025-04-14 14:03:35] -rw------- 1 boincer umatlas 192338227 Apr 14 14:02 HITS.44075483._013005.pool.root.1
[2025-04-14 14:03:35] -rw-r--r-- 1 boincer umatlas       529 Apr 14 14:02 boinc_task_state.xml
[2025-04-14 14:03:35] -rw------- 1 boincer umatlas      1047 Apr 14 14:03 memory_monitor_summary.json
[2025-04-14 14:03:35] -rw------- 1 boincer umatlas    309791 Apr 14 14:03 log.44075483._013005.job.log.tgz.1
[2025-04-14 14:03:35] -rw------- 1 boincer umatlas      7742 Apr 14 14:03 heartbeat.json
[2025-04-14 14:03:35] -rw-r--r-- 1 boincer umatlas      8192 Apr 14 14:03 boinc_mmap_file
[2025-04-14 14:03:35] -rw-r--r-- 1 boincer umatlas        27 Apr 14 14:03 wrapper_checkpoint.txt
[2025-04-14 14:03:35] -rw------- 1 boincer umatlas      4816 Apr 14 14:03 pilotlog.txt
[2025-04-14 14:03:35] -rw------- 1 boincer umatlas    446086 Apr 14 14:03 log.44075483._013005.job.log.1
[2025-04-14 14:03:35] -rw------- 1 boincer umatlas       357 Apr 14 14:03 output.list
[2025-04-14 14:03:35] -rw-r--r-- 1 boincer umatlas       620 Apr 14 14:03 runtime_log
[2025-04-14 14:03:35] -rw------- 1 boincer umatlas    778240 Apr 14 14:03 result.tar.gz
[2025-04-14 14:03:35] -rw-r--r-- 1 boincer umatlas     11013 Apr 14 14:03 runtime_log.err
[2025-04-14 14:03:35] -rw------- 1 boincer umatlas       657 Apr 14 14:03 HrGLDmB6QO7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm02zKDme2sDXn.diag
[2025-04-14 14:03:35] -rw-r--r-- 1 boincer umatlas     21438 Apr 14 14:03 stderr.txt
[2025-04-14 14:03:35] HITS file was successfully produced:
[2025-04-14 14:03:35] -rw------- 1 boincer umatlas 192338227 Apr 14 14:02 shared/HITS.pool.root.1
[2025-04-14 14:03:35]  *** Contents of shared directory: ***
[2025-04-14 14:03:35] total 410528
[2025-04-14 14:03:35] -rw-r--r-- 2 boincer umatlas 226723909 Apr 14 12:48 ATLAS.root_0
[2025-04-14 14:03:35] -rw-r--r-- 2 boincer umatlas     17569 Apr 14 12:48 start_atlas.sh
[2025-04-14 14:03:35] -rw-r--r-- 2 boincer umatlas    508892 Apr 14 12:48 input.tar.gz
[2025-04-14 14:03:35] -rw------- 1 boincer umatlas 192338227 Apr 14 14:02 HITS.pool.root.1
[2025-04-14 14:03:35] -rw------- 1 boincer umatlas    778240 Apr 14 14:03 result.tar.gz
14:03:37 (2352): run_atlas exited; CPU time 28533.936123
14:03:37 (2352): called boinc_finish(0)

</stderr_txt>
]]>

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