Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:52:57 (1746055): wrapper (7.7.26015): starting
11:52:57 (1746055): wrapper: running run_atlas (--nthreads 3)
[2025-04-17 11:52:57] Arguments: --nthreads 3
[2025-04-17 11:52:57] Threads: 3
[2025-04-17 11:52:57] Checking for CVMFS
[2025-04-17 11:53:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 11:53:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 11:53:44] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 11:53:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 11:53:44] 2.11.5.0 1746273 0 30768 144946 3 1 14114264 15728641 0 130560 0 0 0.000 1172 45 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-04-17 11:53:44] CVMFS is ok
[2025-04-17 11:53:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 11:53:44] Checking for apptainer binary...
[2025-04-17 11:53:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 11:53:44] Running /usr/bin/apptainer --version
[2025-04-17 11:53:44] apptainer version 1.3.4-1.el9
[2025-04-17 11:53:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 11:53:44] testio003
[2025-04-17 11:53:44] apptainer works
[2025-04-17 11:53:44] Set ATHENA_PROC_NUMBER=3
[2025-04-17 11:53:44] Set ATHENA_CORE_NUMBER=3
[2025-04-17 11:53:44] Starting ATLAS job with PandaID=6602118270
[2025-04-17 11:53:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 14:06:55]  *** The last 200 lines of the pilot log: ***
[2025-04-17 14:06:55] 2025-04-17 05:06:37,157 | INFO     | intersect: -90775368835.53162
[2025-04-17 14:06:55] 2025-04-17 05:06:37,157 | INFO     | chi2: 4.126592867996196
[2025-04-17 14:06:55] 2025-04-17 05:06:37,157 | INFO     | sum of square deviations: 591173875.0
[2025-04-17 14:06:55] 2025-04-17 05:06:37,157 | INFO     | sum of deviations: 40308731924.00001
[2025-04-17 14:06:55] 2025-04-17 05:06:37,157 | INFO     | mean x: 1744862288.5
[2025-04-17 14:06:55] 2025-04-17 05:06:37,158 | INFO     | mean y: 2245689.0161290322
[2025-04-17 14:06:55] 2025-04-17 05:06:37,158 | INFO     | -- intersect: -118969835462.98616
[2025-04-17 14:06:55] 2025-04-17 05:06:37,158 | INFO     | intersect: -118969835462.98616
[2025-04-17 14:06:55] 2025-04-17 05:06:37,158 | INFO     | chi2: 3.4821015237984385
[2025-04-17 14:06:55] 2025-04-17 05:06:37,158 | INFO     | current chi2=3.4821015237984385 (change=15.618001698110623 %)
[2025-04-17 14:06:55] 2025-04-17 05:06:37,158 | INFO     | right removable region: 123
[2025-04-17 14:06:55] 2025-04-17 05:06:37,158 | INFO     | sum of square deviations: 591173875.0
[2025-04-17 14:06:55] 2025-04-17 05:06:37,158 | INFO     | sum of deviations: 9912804390.0
[2025-04-17 14:06:55] 2025-04-17 05:06:37,158 | INFO     | mean x: 1744862593.5
[2025-04-17 14:06:55] 2025-04-17 05:06:37,158 | INFO     | mean y: 2284861.85483871
[2025-04-17 14:06:55] 2025-04-17 05:06:37,158 | INFO     | -- intersect: -29255573626.5528
[2025-04-17 14:06:55] 2025-04-17 05:06:37,159 | INFO     | intersect: -29255573626.5528
[2025-04-17 14:06:55] 2025-04-17 05:06:37,159 | INFO     | chi2: 2.1468659953575964
[2025-04-17 14:06:55] 2025-04-17 05:06:37,159 | INFO     | current chi2=2.1468659953575964 (change=47.974853249817244 %)
[2025-04-17 14:06:55] 2025-04-17 05:06:37,159 | INFO     | sum of square deviations: 522502820.0
[2025-04-17 14:06:55] 2025-04-17 05:06:37,159 | INFO     | sum of deviations: -6676062832.999999
[2025-04-17 14:06:55] 2025-04-17 05:06:37,159 | INFO     | mean x: 1744862746.0
[2025-04-17 14:06:55] 2025-04-17 05:06:37,159 | INFO     | mean y: 2321686.4033613447
[2025-04-17 14:06:55] 2025-04-17 05:06:37,159 | INFO     | -- intersect: 22296580935.103527
[2025-04-17 14:06:55] 2025-04-17 05:06:37,159 | INFO     | intersect: 22296580935.103527
[2025-04-17 14:06:55] 2025-04-17 05:06:37,159 | INFO     | chi2: 1.318586818953767
[2025-04-17 14:06:55] 2025-04-17 05:06:37,159 | INFO     | current chi2=1.318586818953767 (change=38.58085125922662 %)
[2025-04-17 14:06:55] 2025-04-17 05:06:37,160 | INFO     | sum of square deviations: 459366752.5
[2025-04-17 14:06:55] 2025-04-17 05:06:37,160 | INFO     | sum of deviations: -15851273705.999996
[2025-04-17 14:06:55] 2025-04-17 05:06:37,160 | INFO     | mean x: 1744862898.5
[2025-04-17 14:06:55] 2025-04-17 05:06:37,160 | INFO     | mean y: 2343421.6315789474
[2025-04-17 14:06:55] 2025-04-17 05:06:37,160 | INFO     | -- intersect: 60211967285.448296
[2025-04-17 14:06:55] 2025-04-17 05:06:37,160 | INFO     | intersect: 60211967285.448296
[2025-04-17 14:06:55] 2025-04-17 05:06:37,160 | INFO     | chi2: 0.8293229526965029
[2025-04-17 14:06:55] 2025-04-17 05:06:37,160 | INFO     | current chi2=0.8293229526965029 (change=37.10516889934261 %)
[2025-04-17 14:06:55] 2025-04-17 05:06:37,160 | INFO     | sum of square deviations: 401533110.0
[2025-04-17 14:06:55] 2025-04-17 05:06:37,160 | INFO     | sum of deviations: -9437511910.0
[2025-04-17 14:06:55] 2025-04-17 05:06:37,160 | INFO     | mean x: 1744863051.0
[2025-04-17 14:06:55] 2025-04-17 05:06:37,160 | INFO     | mean y: 2326485.2935779816
[2025-04-17 14:06:55] 2025-04-17 05:06:37,161 | INFO     | -- intersect: 41013056148.736374
[2025-04-17 14:06:55] 2025-04-17 05:06:37,161 | INFO     | intersect: 41013056148.736374
[2025-04-17 14:06:55] 2025-04-17 05:06:37,161 | INFO     | chi2: 0.7531613541069148
[2025-04-17 14:06:55] 2025-04-17 05:06:37,161 | INFO     | current chi2=0.7531613541069148 (change=9.183587448285671 %)
[2025-04-17 14:06:55] 2025-04-17 05:06:37,161 | INFO     | left removable region: 40
[2025-04-17 14:06:55] 2025-04-17 05:06:37,161 | INFO     | sum of square deviations: 177275882.0
[2025-04-17 14:06:55] 2025-04-17 05:06:37,161 | INFO     | sum of deviations: 112276600.0
[2025-04-17 14:06:55] 2025-04-17 05:06:37,161 | INFO     | mean x: 1744863478.0
[2025-04-17 14:06:55] 2025-04-17 05:06:37,161 | INFO     | mean y: 2334493.638554217
[2025-04-17 14:06:55] 2025-04-17 05:06:37,161 | INFO     | -- intersect: -1102764161.428438
[2025-04-17 14:06:55] 2025-04-17 05:06:37,161 | INFO     | intersect: -1102764161.428438
[2025-04-17 14:06:55] 2025-04-17 05:06:37,161 | INFO     | chi2: 0.00015107199283510215
[2025-04-17 14:06:55] 2025-04-17 05:06:37,161 | INFO     | -- intersect: -1102764161.428438
[2025-04-17 14:06:55] 2025-04-17 05:06:37,161 | INFO     | current memory leak: 0.63 B/s (using 83 data points, chi2=0.00)
[2025-04-17 14:06:55] 2025-04-17 05:06:37,162 | INFO     | ..............................
[2025-04-17 14:06:55] 2025-04-17 05:06:37,162 | INFO     | . Timing measurements:
[2025-04-17 14:06:55] 2025-04-17 05:06:37,162 | INFO     | . get job = 0 s
[2025-04-17 14:06:55] 2025-04-17 05:06:37,162 | INFO     | . initial setup = 7 s
[2025-04-17 14:06:55] 2025-04-17 05:06:37,162 | INFO     | . payload setup = 4 s
[2025-04-17 14:06:55] 2025-04-17 05:06:37,162 | INFO     | . stage-in = 0 s
[2025-04-17 14:06:55] 2025-04-17 05:06:37,162 | INFO     | . payload execution = 7811 s
[2025-04-17 14:06:55] 2025-04-17 05:06:37,162 | INFO     | . stage-out = 0 s
[2025-04-17 14:06:55] 2025-04-17 05:06:37,162 | INFO     | . log creation = 0 s
[2025-04-17 14:06:55] 2025-04-17 05:06:37,162 | INFO     | ..............................
[2025-04-17 14:06:55] 2025-04-17 05:06:37,213 | INFO     | 
[2025-04-17 14:06:55] 2025-04-17 05:06:37,214 | INFO     | job summary report
[2025-04-17 14:06:55] 2025-04-17 05:06:37,214 | INFO     | --------------------------------------------------
[2025-04-17 14:06:55] 2025-04-17 05:06:37,214 | INFO     | PanDA job id: 6602118270
[2025-04-17 14:06:55] 2025-04-17 05:06:37,214 | INFO     | task id: 44075483
[2025-04-17 14:06:55] 2025-04-17 05:06:37,214 | INFO     | errors: (none)
[2025-04-17 14:06:55] 2025-04-17 05:06:37,214 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 14:06:55] 2025-04-17 05:06:37,214 | INFO     | pilot state: finished 
[2025-04-17 14:06:55] 2025-04-17 05:06:37,214 | INFO     | transexitcode: 0
[2025-04-17 14:06:55] 2025-04-17 05:06:37,214 | INFO     | exeerrorcode: 0
[2025-04-17 14:06:55] 2025-04-17 05:06:37,214 | INFO     | exeerrordiag: 
[2025-04-17 14:06:55] 2025-04-17 05:06:37,214 | INFO     | exitcode: 0
[2025-04-17 14:06:55] 2025-04-17 05:06:37,214 | INFO     | exitmsg: OK
[2025-04-17 14:06:55] 2025-04-17 05:06:37,214 | INFO     | cpuconsumptiontime: 18770 s
[2025-04-17 14:06:55] 2025-04-17 05:06:37,214 | INFO     | nevents: 400
[2025-04-17 14:06:55] 2025-04-17 05:06:37,214 | INFO     | neventsw: 0
[2025-04-17 14:06:55] 2025-04-17 05:06:37,214 | INFO     | pid: 1756654
[2025-04-17 14:06:55] 2025-04-17 05:06:37,214 | INFO     | pgrp: 1756654
[2025-04-17 14:06:55] 2025-04-17 05:06:37,214 | INFO     | corecount: 3
[2025-04-17 14:06:55] 2025-04-17 05:06:37,214 | INFO     | event service: False
[2025-04-17 14:06:55] 2025-04-17 05:06:37,214 | INFO     | sizes: {0: 2417142, 1: 2417341, 4: 2417547, 11: 2417575, 7819: 2444742, 7820: 2453683, 7821: 2453867, 7868: 2454037}
[2025-04-17 14:06:55] 2025-04-17 05:06:37,214 | INFO     | --------------------------------------------------
[2025-04-17 14:06:55] 2025-04-17 05:06:37,214 | INFO     | 
[2025-04-17 14:06:55] 2025-04-17 05:06:37,214 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-04-17 14:06:55] 2025-04-17 05:06:37,225 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 14:06:55] 2025-04-17 05:06:37,225 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 14:06:55] 2025-04-17 05:06:37,225 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 14:06:55] 2025-04-17 05:06:37,225 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 14:06:55] 2025-04-17 05:06:37,225 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 14:06:55] 2025-04-17 05:06:37,225 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 14:06:55] 2025-04-17 05:06:37,225 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 14:06:55] 2025-04-17 05:06:37,225 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 14:06:55] 2025-04-17 05:06:37,226 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 14:06:55] 2025-04-17 05:06:37,226 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 14:06:55] 2025-04-17 05:06:37,226 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 14:06:55] 2025-04-17 05:06:37,226 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 14:06:55] 2025-04-17 05:06:37,226 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 14:06:55] 2025-04-17 05:06:37,226 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 14:06:55] 2025-04-17 05:06:37,226 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 14:06:55] 2025-04-17 05:06:37,226 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 14:06:55] 2025-04-17 05:06:37,226 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 14:06:55] 2025-04-17 05:06:37,226 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 14:06:55] 2025-04-17 05:06:37,226 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 14:06:55] 2025-04-17 05:06:37,226 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 14:06:55] 2025-04-17 05:06:37,226 | INFO     | job 6602118270 has completed (purged errors)
[2025-04-17 14:06:55] 2025-04-17 05:06:37,226 | INFO     | overall cleanup function is called
[2025-04-17 14:06:55] 2025-04-17 05:06:38,212 | INFO     | PID=1750275 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-17 14:06:55] 2025-04-17 05:06:38,231 | INFO     | --- collectZombieJob: --- 10, [1756654]
[2025-04-17 14:06:55] 2025-04-17 05:06:38,231 | INFO     | zombie collector waiting for pid 1756654
[2025-04-17 14:06:55] 2025-04-17 05:06:38,231 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 14:06:55] 2025-04-17 05:06:38,231 | INFO     | collected zombie processes
[2025-04-17 14:06:55] 2025-04-17 05:06:38,231 | INFO     | will attempt to kill all subprocesses of pid=1756654
[2025-04-17 14:06:55] 2025-04-17 05:06:38,270 | INFO     | process IDs to be killed: [1756654] (in reverse order)
[2025-04-17 14:06:55] 2025-04-17 05:06:38,290 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 14:06:55] 2025-04-17 05:06:38,291 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 14:06:55] 2025-04-17 05:06:38,292 | INFO     | did not find any defunct processes belonging to 1756654
[2025-04-17 14:06:55] 2025-04-17 05:06:38,293 | INFO     | did not find any defunct processes belonging to 1756654
[2025-04-17 14:06:55] 2025-04-17 05:06:38,293 | INFO     | ready for new job
[2025-04-17 14:06:55] 2025-04-17 05:06:38,293 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 14:06:55] 2025-04-17 05:06:38,294 | INFO     | **************************************
[2025-04-17 14:06:55] 2025-04-17 05:06:38,294 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 14:06:55] 2025-04-17 05:06:38,294 | INFO     | **************************************
[2025-04-17 14:06:55] 2025-04-17 05:06:38,294 | INFO     | 
[2025-04-17 14:06:55] 2025-04-17 05:06:38,306 | INFO     | architecture information:
[2025-04-17 14:06:55] 2025-04-17 05:06:38,307 | INFO     | executing command: cat /etc/os-release
[2025-04-17 14:06:55] 2025-04-17 05:06:38,314 | INFO     | cat /etc/os-release:
[2025-04-17 14:06:55] NAME="CentOS Linux"
[2025-04-17 14:06:55] VERSION="7 (Core)"
[2025-04-17 14:06:55] ID="centos"
[2025-04-17 14:06:55] ID_LIKE="rhel fedora"
[2025-04-17 14:06:55] VERSION_ID="7"
[2025-04-17 14:06:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 14:06:55] ANSI_COLOR="0;31"
[2025-04-17 14:06:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 14:06:55] HOME_URL="https://www.centos.org/"
[2025-04-17 14:06:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 14:06:55] 
[2025-04-17 14:06:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 14:06:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 14:06:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 14:06:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 14:06:55] 
[2025-04-17 14:06:55] 2025-04-17 05:06:38,314 | INFO     | **************************************
[2025-04-17 14:06:55] 2025-04-17 05:06:38,817 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-04-17 14:06:55] 2025-04-17 05:06:38,825 | INFO     | sufficient remaining disk space (38622199808 B)
[2025-04-17 14:06:55] 2025-04-17 05:06:38,826 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 14:06:55] 2025-04-17 05:06:38,826 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 14:06:55] 2025-04-17 05:06:38,826 | INFO     | update_server=False
[2025-04-17 14:06:55] 2025-04-17 05:06:38,826 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 14:06:55] 2025-04-17 05:06:38,826 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-17 14:06:55] 2025-04-17 05:06:38,826 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 14:06:55] 2025-04-17 05:06:38,826 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 14:06:55] 2025-04-17 05:06:38,826 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 14:06:55] 2025-04-17 05:06:38,826 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 14:06:55] 2025-04-17 05:06:38,891 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-17 14:06:55] 2025-04-17 05:06:38,891 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-17 14:06:55] 2025-04-17 05:06:38,891 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 14:06:55] 2025-04-17 05:06:38,892 | INFO     | will abort loop
[2025-04-17 14:06:55] 2025-04-17 05:06:38,892 | INFO     | all job control threads have been joined
[2025-04-17 14:06:55] 2025-04-17 05:06:38,949 | INFO     | all payload control threads have been joined
[2025-04-17 14:06:55] 2025-04-17 05:06:39,382 | INFO     | all data control threads have been joined
[2025-04-17 14:06:55] 2025-04-17 05:06:39,830 | INFO     | [job] retrieve thread has finished
[2025-04-17 14:06:55] 2025-04-17 05:06:39,831 | INFO     | [job] queue monitor thread has finished
[2025-04-17 14:06:55] 2025-04-17 05:06:39,896 | INFO     | [job] job monitor thread has finished
[2025-04-17 14:06:55] 2025-04-17 05:06:39,897 | INFO     | [job] control thread has finished
[2025-04-17 14:06:55] 2025-04-17 05:06:39,954 | INFO     | [payload] control thread has finished
[2025-04-17 14:06:55] 2025-04-17 05:06:40,031 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 14:06:55] 2025-04-17 05:06:40,046 | INFO     | [job] validate thread has finished
[2025-04-17 14:06:55] 2025-04-17 05:06:40,096 | INFO     | [payload] failed_post thread has finished
[2025-04-17 14:06:55] 2025-04-17 05:06:40,135 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 14:06:55] 2025-04-17 05:06:40,212 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 14:06:55] 2025-04-17 05:06:40,387 | INFO     | [data] control thread has finished
[2025-04-17 14:06:55] 2025-04-17 05:06:40,524 | INFO     | [data] copytool_in thread has finished
[2025-04-17 14:06:55] 2025-04-17 05:06:40,995 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 14:06:55] 2025-04-17 05:06:41,229 | INFO     | [payload] validate_post thread has finished
[2025-04-17 14:06:55] 2025-04-17 05:06:41,445 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 14:06:55] 2025-04-17 05:06:42,036 | INFO     | [data] copytool_out thread has finished
[2025-04-17 14:06:55] 2025-04-17 05:06:45,450 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 14:06:55] 2025-04-17 05:06:49,489 | INFO     | job.realtimelogging is not enabled
[2025-04-17 14:06:55] 2025-04-17 05:06:50,494 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 14:06:55] 2025-04-17 05:06:50,566 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140138229266240)>', '<ExcThread(monitor, started 140137602217728)>']
[2025-04-17 14:06:55] 2025-04-17 05:06:50,880 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 14:06:55] 2025-04-17 05:06:50,880 | INFO     | [monitor] control thread has ended
[2025-04-17 14:06:55] 2025-04-17 05:06:55,581 | INFO     | all workflow threads have been joined
[2025-04-17 14:06:55] 2025-04-17 05:06:55,581 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 14:06:55] 2025-04-17 05:06:55,582 | INFO     | traces error code: 0
[2025-04-17 14:06:55] 2025-04-17 05:06:55,582 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 14:06:55] 2025-04-17 05:06:55,641 [wrapper] ==== pilot stdout END ====
[2025-04-17 14:06:55] 2025-04-17 05:06:55,643 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 14:06:55] 2025-04-17 05:06:55,644 [wrapper] pilotpid: 1750275
[2025-04-17 14:06:55] 2025-04-17 05:06:55,646 [wrapper] Pilot exit status: 0
[2025-04-17 14:06:55] 2025-04-17 05:06:55,651 [wrapper] pandaids: 6602118270
[2025-04-17 14:06:55] 2025-04-17 05:06:55,665 [wrapper] cleanup supervisor_pilot 1770590 1750276
[2025-04-17 14:06:55] 2025-04-17 05:06:55,666 [wrapper] Test setup, not cleaning
[2025-04-17 14:06:55] 2025-04-17 05:06:55,668 [wrapper] apfmon messages muted
[2025-04-17 14:06:55] 2025-04-17 05:06:55,670 [wrapper] ==== wrapper stdout END ====
[2025-04-17 14:06:55] 2025-04-17 05:06:55,671 [wrapper] ==== wrapper stderr END ====
[2025-04-17 14:06:55]  *** Error codes and diagnostics ***
[2025-04-17 14:06:55]     "exeErrorCode": 0,
[2025-04-17 14:06:55]     "exeErrorDiag": "",
[2025-04-17 14:06:55]     "pilotErrorCode": 0,
[2025-04-17 14:06:55]     "pilotErrorDiag": "",
[2025-04-17 14:06:55]  *** Listing of results directory ***
[2025-04-17 14:06:55] total 412460
[2025-04-17 14:06:55] -rw-r--r--. 1 boinc boinc      5111 Apr 14 15:08 queuedata.json
[2025-04-17 14:06:55] -rw-r--r--. 1 boinc boinc    495897 Apr 14 15:08 pilot3.tar.gz
[2025-04-17 14:06:55] -rwx------. 1 boinc boinc     37140 Apr 14 15:09 runpilot2-wrapper.sh
[2025-04-17 14:06:55] -rw-r--r--. 1 boinc boinc       100 Apr 17 11:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 14:06:55] -rwxr-xr-x. 1 boinc boinc      7986 Apr 17 11:52 run_atlas
[2025-04-17 14:06:55] -rw-r--r--. 1 boinc boinc       105 Apr 17 11:52 job.xml
[2025-04-17 14:06:55] -rw-r--r--. 1 boinc boinc      9291 Apr 17 11:52 init_data.xml
[2025-04-17 14:06:55] -rw-r--r--. 2 boinc boinc 222410448 Apr 17 11:52 EVNT.44075481._000535.pool.root.1
[2025-04-17 14:06:55] -rw-r--r--. 2 boinc boinc     17569 Apr 17 11:52 start_atlas.sh
[2025-04-17 14:06:55] drwxrwx--x. 2 boinc boinc        68 Apr 17 11:52 shared
[2025-04-17 14:06:55] -rw-r--r--. 2 boinc boinc    508889 Apr 17 11:52 input.tar.gz
[2025-04-17 14:06:55] -rw-r--r--. 1 boinc boinc         0 Apr 17 11:52 boinc_lockfile
[2025-04-17 14:06:55] -rw-r--r--. 1 boinc boinc      2577 Apr 17 11:53 pandaJob.out
[2025-04-17 14:06:55] -rw-------. 1 boinc boinc       424 Apr 17 11:53 setup.sh.local
[2025-04-17 14:06:55] -rw-------. 1 boinc boinc    986528 Apr 17 11:55 agis_schedconf.cvmfs.json
[2025-04-17 14:06:55] -rw-------. 1 boinc boinc   1603529 Apr 17 11:55 agis_ddmendpoints.agis.ALL.json
[2025-04-17 14:06:55] drwx------. 4 boinc boinc      4096 Apr 17 11:55 pilot3
[2025-04-17 14:06:55] -rw-------. 1 boinc boinc 194270314 Apr 17 14:05 HITS.44075483._013582.pool.root.1
[2025-04-17 14:06:55] -rw-------. 1 boinc boinc      1011 Apr 17 14:05 memory_monitor_summary.json
[2025-04-17 14:06:55] -rw-------. 1 boinc boinc    256562 Apr 17 14:05 log.44075483._013582.job.log.tgz.1
[2025-04-17 14:06:55] -rw-------. 1 boinc boinc        96 Apr 17 14:05 pilot_heartbeat.json
[2025-04-17 14:06:55] -rw-r--r--. 1 boinc boinc       529 Apr 17 14:05 boinc_task_state.xml
[2025-04-17 14:06:55] -rw-------. 1 boinc boinc      7660 Apr 17 14:06 heartbeat.json
[2025-04-17 14:06:55] -rw-r--r--. 1 boinc boinc      8192 Apr 17 14:06 boinc_mmap_file
[2025-04-17 14:06:55] -rw-r--r--. 1 boinc boinc        27 Apr 17 14:06 wrapper_checkpoint.txt
[2025-04-17 14:06:55] -rw-------. 1 boinc boinc      4734 Apr 17 14:06 pilotlog.txt
[2025-04-17 14:06:55] -rw-------. 1 boinc boinc    666842 Apr 17 14:06 log.44075483._013582.job.log.1
[2025-04-17 14:06:55] -rw-------. 1 boinc boinc       357 Apr 17 14:06 output.list
[2025-04-17 14:06:55] -rw-r--r--. 1 boinc boinc       620 Apr 17 14:06 runtime_log
[2025-04-17 14:06:55] -rw-------. 1 boinc boinc    942080 Apr 17 14:06 result.tar.gz
[2025-04-17 14:06:55] -rw-r--r--. 1 boinc boinc     10971 Apr 17 14:06 runtime_log.err
[2025-04-17 14:06:55] -rw-------. 1 boinc boinc       643 Apr 17 14:06 bzWLDmLBSO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmgcVLDm3DAOfm.diag
[2025-04-17 14:06:55] -rw-r--r--. 1 boinc boinc     20606 Apr 17 14:06 stderr.txt
[2025-04-17 14:06:55] HITS file was successfully produced:
[2025-04-17 14:06:55] -rw-------. 1 boinc boinc 194270314 Apr 17 14:05 shared/HITS.pool.root.1
[2025-04-17 14:06:55]  *** Contents of shared directory: ***
[2025-04-17 14:06:55] total 408360
[2025-04-17 14:06:55] -rw-r--r--. 2 boinc boinc 222410448 Apr 17 11:52 ATLAS.root_0
[2025-04-17 14:06:55] -rw-r--r--. 2 boinc boinc     17569 Apr 17 11:52 start_atlas.sh
[2025-04-17 14:06:55] -rw-r--r--. 2 boinc boinc    508889 Apr 17 11:52 input.tar.gz
[2025-04-17 14:06:55] -rw-------. 1 boinc boinc 194270314 Apr 17 14:05 HITS.pool.root.1
[2025-04-17 14:06:55] -rw-------. 1 boinc boinc    942080 Apr 17 14:06 result.tar.gz
14:06:56 (1746055): run_atlas exited; CPU time 18803.426527
14:06:56 (1746055): called boinc_finish(0)

</stderr_txt>
]]>

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