Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
18:14:21 (2996441): wrapper (7.7.26015): starting
18:14:21 (2996441): wrapper: running run_atlas (--nthreads 12)
[2025-04-14 18:14:21] Arguments: --nthreads 12
[2025-04-14 18:14:21] Threads: 12
[2025-04-14 18:14:21] Checking for CVMFS
[2025-04-14 18:14:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-14 18:14:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-14 18:14:21] Running cvmfs_config stat atlas.cern.ch
[2025-04-14 18:14:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-14 18:14:22] 2.12.6.0 4038419 5136 115796 144858 3 235 3087621 4096000 13315 130560 0 38543421 99.978 1313026 418 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-14 18:14:22] CVMFS is ok
[2025-04-14 18:14:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-14 18:14:22] Checking for apptainer binary...
[2025-04-14 18:14:22] apptainer is not installed, using version from CVMFS
[2025-04-14 18:14:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-14 18:14:22] epyc7v12
[2025-04-14 18:14:22] apptainer works
[2025-04-14 18:14:22] Set ATHENA_PROC_NUMBER=12
[2025-04-14 18:14:22] Set ATHENA_CORE_NUMBER=12
[2025-04-14 18:14:22] Starting ATLAS job with PandaID=6602123900
[2025-04-14 18:14:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-14 20:42:16]  *** The last 200 lines of the pilot log: ***
[2025-04-14 20:42:16] 2025-04-14 20:42:03,697 | INFO     | sum of deviations: 88782218111.6758
[2025-04-14 20:42:16] 2025-04-14 20:42:03,697 | INFO     | mean x: 1744658897.0551724
[2025-04-14 20:42:16] 2025-04-14 20:42:03,697 | INFO     | mean y: 2466907.165517241
[2025-04-14 20:42:16] 2025-04-14 20:42:03,697 | INFO     | -- intersect: -163859584070.4244
[2025-04-14 20:42:16] 2025-04-14 20:42:03,697 | INFO     | intersect: -163859584070.4244
[2025-04-14 20:42:16] 2025-04-14 20:42:03,697 | INFO     | chi2: 6.027671777000891
[2025-04-14 20:42:16] 2025-04-14 20:42:03,698 | INFO     | sum of square deviations: 850819772.5428559
[2025-04-14 20:42:16] 2025-04-14 20:42:03,699 | INFO     | sum of deviations: 95565334045.02858
[2025-04-14 20:42:16] 2025-04-14 20:42:03,699 | INFO     | mean x: 1744658744.557143
[2025-04-14 20:42:16] 2025-04-14 20:42:03,699 | INFO     | mean y: 2477377.3714285716
[2025-04-14 20:42:16] 2025-04-14 20:42:03,699 | INFO     | -- intersect: -195960170763.5842
[2025-04-14 20:42:16] 2025-04-14 20:42:03,699 | INFO     | intersect: -195960170763.5842
[2025-04-14 20:42:16] 2025-04-14 20:42:03,699 | INFO     | chi2: 5.1639195860499605
[2025-04-14 20:42:16] 2025-04-14 20:42:03,699 | INFO     | current chi2=5.1639195860499605 (change=14.329781429815947 %)
[2025-04-14 20:42:16] 2025-04-14 20:42:03,700 | INFO     | right removable region: 139
[2025-04-14 20:42:16] 2025-04-14 20:42:03,700 | INFO     | sum of square deviations: 850814892.5428559
[2025-04-14 20:42:16] 2025-04-14 20:42:03,701 | INFO     | sum of deviations: 49156196116.314285
[2025-04-14 20:42:16] 2025-04-14 20:42:03,701 | INFO     | mean x: 1744659049.557143
[2025-04-14 20:42:16] 2025-04-14 20:42:03,701 | INFO     | mean y: 2530697.5857142857
[2025-04-14 20:42:16] 2025-04-14 20:42:03,701 | INFO     | -- intersect: -100795895784.83932
[2025-04-14 20:42:16] 2025-04-14 20:42:03,701 | INFO     | intersect: -100795895784.83932
[2025-04-14 20:42:16] 2025-04-14 20:42:03,701 | INFO     | chi2: 3.1749269477756887
[2025-04-14 20:42:16] 2025-04-14 20:42:03,701 | INFO     | current chi2=3.1749269477756887 (change=47.3274745998961 %)
[2025-04-14 20:42:16] 2025-04-14 20:42:03,702 | INFO     | sum of square deviations: 762866617.5259277
[2025-04-14 20:42:16] 2025-04-14 20:42:03,702 | INFO     | sum of deviations: 16214472211.237038
[2025-04-14 20:42:16] 2025-04-14 20:42:03,702 | INFO     | mean x: 1744659202.0592592
[2025-04-14 20:42:16] 2025-04-14 20:42:03,703 | INFO     | mean y: 2587844.9703703704
[2025-04-14 20:42:16] 2025-04-14 20:42:03,703 | INFO     | -- intersect: -37079554039.29866
[2025-04-14 20:42:16] 2025-04-14 20:42:03,703 | INFO     | intersect: -37079554039.29866
[2025-04-14 20:42:16] 2025-04-14 20:42:03,703 | INFO     | chi2: 1.353526427750745
[2025-04-14 20:42:16] 2025-04-14 20:42:03,703 | INFO     | current chi2=1.353526427750745 (change=57.368265474611704 %)
[2025-04-14 20:42:16] 2025-04-14 20:42:03,703 | INFO     | sum of square deviations: 681197530.0076928
[2025-04-14 20:42:16] 2025-04-14 20:42:03,704 | INFO     | sum of deviations: 2014727105.3461494
[2025-04-14 20:42:16] 2025-04-14 20:42:03,704 | INFO     | mean x: 1744659354.5615385
[2025-04-14 20:42:16] 2025-04-14 20:42:03,704 | INFO     | mean y: 2614175.269230769
[2025-04-14 20:42:16] 2025-04-14 20:42:03,704 | INFO     | -- intersect: -5157434615.851833
[2025-04-14 20:42:16] 2025-04-14 20:42:03,704 | INFO     | intersect: -5157434615.851833
[2025-04-14 20:42:16] 2025-04-14 20:42:03,704 | INFO     | chi2: 0.9890838487162157
[2025-04-14 20:42:16] 2025-04-14 20:42:03,705 | INFO     | current chi2=0.9890838487162157 (change=26.925412874290938 %)
[2025-04-14 20:42:16] 2025-04-14 20:42:03,705 | INFO     | sum of square deviations: 605575067.4879987
[2025-04-14 20:42:16] 2025-04-14 20:42:03,706 | INFO     | sum of deviations: -5174302737.976
[2025-04-14 20:42:16] 2025-04-14 20:42:03,706 | INFO     | mean x: 1744659507.064
[2025-04-14 20:42:16] 2025-04-14 20:42:03,706 | INFO     | mean y: 2628538.872
[2025-04-14 20:42:16] 2025-04-14 20:42:03,706 | INFO     | -- intersect: 14909775396.294458
[2025-04-14 20:42:16] 2025-04-14 20:42:03,706 | INFO     | intersect: 14909775396.294458
[2025-04-14 20:42:16] 2025-04-14 20:42:03,706 | INFO     | chi2: 0.8795993771059518
[2025-04-14 20:42:16] 2025-04-14 20:42:03,706 | INFO     | current chi2=0.8795993771059518 (change=11.069281108206303 %)
[2025-04-14 20:42:16] 2025-04-14 20:42:03,707 | INFO     | left removable region: 40
[2025-04-14 20:42:16] 2025-04-14 20:42:03,707 | INFO     | sum of square deviations: 300842732.7474753
[2025-04-14 20:42:16] 2025-04-14 20:42:03,707 | INFO     | sum of deviations: 1003725800.6060606
[2025-04-14 20:42:16] 2025-04-14 20:42:03,707 | INFO     | mean x: 1744659934.0505052
[2025-04-14 20:42:16] 2025-04-14 20:42:03,708 | INFO     | mean y: 2654572.878787879
[2025-04-14 20:42:16] 2025-04-14 20:42:03,708 | INFO     | -- intersect: -5818194656.54258
[2025-04-14 20:42:16] 2025-04-14 20:42:03,708 | INFO     | intersect: -5818194656.54258
[2025-04-14 20:42:16] 2025-04-14 20:42:03,708 | INFO     | chi2: 0.00021646894387981235
[2025-04-14 20:42:16] 2025-04-14 20:42:03,708 | INFO     | -- intersect: -5818194656.54258
[2025-04-14 20:42:16] 2025-04-14 20:42:03,708 | INFO     | current memory leak: 3.34 B/s (using 99 data points, chi2=0.00)
[2025-04-14 20:42:16] 2025-04-14 20:42:03,709 | INFO     | ..............................
[2025-04-14 20:42:16] 2025-04-14 20:42:03,709 | INFO     | . Timing measurements:
[2025-04-14 20:42:16] 2025-04-14 20:42:03,709 | INFO     | . get job = 0 s
[2025-04-14 20:42:16] 2025-04-14 20:42:03,709 | INFO     | . initial setup = 1 s
[2025-04-14 20:42:16] 2025-04-14 20:42:03,709 | INFO     | . payload setup = 7 s
[2025-04-14 20:42:16] 2025-04-14 20:42:03,709 | INFO     | . stage-in = 0 s
[2025-04-14 20:42:16] 2025-04-14 20:42:03,709 | INFO     | . payload execution = 8810 s
[2025-04-14 20:42:16] 2025-04-14 20:42:03,709 | INFO     | . stage-out = 0 s
[2025-04-14 20:42:16] 2025-04-14 20:42:03,709 | INFO     | . log creation = 0 s
[2025-04-14 20:42:16] 2025-04-14 20:42:03,710 | INFO     | ..............................
[2025-04-14 20:42:16] 2025-04-14 20:42:03,815 | INFO     | 
[2025-04-14 20:42:16] 2025-04-14 20:42:03,815 | INFO     | job summary report
[2025-04-14 20:42:16] 2025-04-14 20:42:03,815 | INFO     | --------------------------------------------------
[2025-04-14 20:42:16] 2025-04-14 20:42:03,815 | INFO     | PanDA job id: 6602123900
[2025-04-14 20:42:16] 2025-04-14 20:42:03,815 | INFO     | task id: 44075483
[2025-04-14 20:42:16] 2025-04-14 20:42:03,816 | INFO     | errors: (none)
[2025-04-14 20:42:16] 2025-04-14 20:42:03,816 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-14 20:42:16] 2025-04-14 20:42:03,816 | INFO     | pilot state: finished 
[2025-04-14 20:42:16] 2025-04-14 20:42:03,816 | INFO     | transexitcode: 0
[2025-04-14 20:42:16] 2025-04-14 20:42:03,816 | INFO     | exeerrorcode: 0
[2025-04-14 20:42:16] 2025-04-14 20:42:03,816 | INFO     | exeerrordiag: 
[2025-04-14 20:42:16] 2025-04-14 20:42:03,816 | INFO     | exitcode: 0
[2025-04-14 20:42:16] 2025-04-14 20:42:03,816 | INFO     | exitmsg: OK
[2025-04-14 20:42:16] 2025-04-14 20:42:03,816 | INFO     | cpuconsumptiontime: 45564 s
[2025-04-14 20:42:16] 2025-04-14 20:42:03,816 | INFO     | nevents: 400
[2025-04-14 20:42:16] 2025-04-14 20:42:03,816 | INFO     | neventsw: 0
[2025-04-14 20:42:16] 2025-04-14 20:42:03,816 | INFO     | pid: 3037383
[2025-04-14 20:42:16] 2025-04-14 20:42:03,817 | INFO     | pgrp: 3037383
[2025-04-14 20:42:16] 2025-04-14 20:42:03,817 | INFO     | corecount: 12
[2025-04-14 20:42:16] 2025-04-14 20:42:03,817 | INFO     | event service: False
[2025-04-14 20:42:16] 2025-04-14 20:42:03,817 | INFO     | sizes: {0: 2417160, 1: 2417359, 7: 2417565, 12: 2417593, 8821: 2445747, 8822: 2454736, 8824: 2454920, 8833: 2455090}
[2025-04-14 20:42:16] 2025-04-14 20:42:03,817 | INFO     | --------------------------------------------------
[2025-04-14 20:42:16] 2025-04-14 20:42:03,817 | INFO     | 
[2025-04-14 20:42:16] 2025-04-14 20:42:03,817 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/12
[2025-04-14 20:42:16] 2025-04-14 20:42:03,841 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-14 20:42:16] 2025-04-14 20:42:03,842 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-14 20:42:16] 2025-04-14 20:42:03,842 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-14 20:42:16] 2025-04-14 20:42:03,842 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-14 20:42:16] 2025-04-14 20:42:03,842 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-14 20:42:16] 2025-04-14 20:42:03,842 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-14 20:42:16] 2025-04-14 20:42:03,842 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-14 20:42:16] 2025-04-14 20:42:03,842 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-14 20:42:16] 2025-04-14 20:42:03,842 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-14 20:42:16] 2025-04-14 20:42:03,842 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-14 20:42:16] 2025-04-14 20:42:03,843 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-14 20:42:16] 2025-04-14 20:42:03,843 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-14 20:42:16] 2025-04-14 20:42:03,843 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-14 20:42:16] 2025-04-14 20:42:03,843 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-14 20:42:16] 2025-04-14 20:42:03,843 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-14 20:42:16] 2025-04-14 20:42:03,843 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-14 20:42:16] 2025-04-14 20:42:03,843 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-14 20:42:16] 2025-04-14 20:42:03,843 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-14 20:42:16] 2025-04-14 20:42:03,843 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-14 20:42:16] 2025-04-14 20:42:03,843 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-14 20:42:16] 2025-04-14 20:42:03,844 | INFO     | job 6602123900 has completed (purged errors)
[2025-04-14 20:42:16] 2025-04-14 20:42:03,844 | INFO     | overall cleanup function is called
[2025-04-14 20:42:16] 2025-04-14 20:42:04,851 | INFO     | --- collectZombieJob: --- 10, [3037383]
[2025-04-14 20:42:16] 2025-04-14 20:42:04,851 | INFO     | zombie collector waiting for pid 3037383
[2025-04-14 20:42:16] 2025-04-14 20:42:04,851 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-14 20:42:16] 2025-04-14 20:42:04,851 | INFO     | collected zombie processes
[2025-04-14 20:42:16] 2025-04-14 20:42:04,851 | INFO     | will attempt to kill all subprocesses of pid=3037383
[2025-04-14 20:42:16] 2025-04-14 20:42:05,479 | INFO     | process IDs to be killed: [3037383] (in reverse order)
[2025-04-14 20:42:16] 2025-04-14 20:42:05,714 | WARNING  | found no corresponding commands to process id(s)
[2025-04-14 20:42:16] 2025-04-14 20:42:05,715 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-14 20:42:16] 2025-04-14 20:42:05,733 | INFO     | did not find any defunct processes belonging to 3037383
[2025-04-14 20:42:16] 2025-04-14 20:42:05,751 | INFO     | did not find any defunct processes belonging to 3037383
[2025-04-14 20:42:16] 2025-04-14 20:42:05,751 | INFO     | ready for new job
[2025-04-14 20:42:16] 2025-04-14 20:42:05,751 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-14 20:42:16] 2025-04-14 20:42:05,753 | INFO     | **************************************
[2025-04-14 20:42:16] 2025-04-14 20:42:05,753 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-14 20:42:16] 2025-04-14 20:42:05,753 | INFO     | **************************************
[2025-04-14 20:42:16] 2025-04-14 20:42:05,754 | INFO     | 
[2025-04-14 20:42:16] 2025-04-14 20:42:05,780 | INFO     | architecture information:
[2025-04-14 20:42:16] 2025-04-14 20:42:05,780 | INFO     | executing command: cat /etc/os-release
[2025-04-14 20:42:16] 2025-04-14 20:42:05,800 | INFO     | cat /etc/os-release:
[2025-04-14 20:42:16] NAME="CentOS Linux"
[2025-04-14 20:42:16] VERSION="7 (Core)"
[2025-04-14 20:42:16] ID="centos"
[2025-04-14 20:42:16] ID_LIKE="rhel fedora"
[2025-04-14 20:42:16] VERSION_ID="7"
[2025-04-14 20:42:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-14 20:42:16] ANSI_COLOR="0;31"
[2025-04-14 20:42:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-14 20:42:16] HOME_URL="https://www.centos.org/"
[2025-04-14 20:42:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-14 20:42:16] 
[2025-04-14 20:42:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-14 20:42:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-14 20:42:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-14 20:42:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-14 20:42:16] 
[2025-04-14 20:42:16] 2025-04-14 20:42:05,801 | INFO     | **************************************
[2025-04-14 20:42:16] 2025-04-14 20:42:06,303 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/12
[2025-04-14 20:42:16] 2025-04-14 20:42:06,323 | INFO     | sufficient remaining disk space (316175024128 B)
[2025-04-14 20:42:16] 2025-04-14 20:42:06,324 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-14 20:42:16] 2025-04-14 20:42:06,324 | INFO     | current server update state: UPDATING_FINAL
[2025-04-14 20:42:16] 2025-04-14 20:42:06,324 | INFO     | update_server=False
[2025-04-14 20:42:16] 2025-04-14 20:42:06,324 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-14 20:42:16] 2025-04-14 20:42:06,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-14 20:42:16] 2025-04-14 20:42:06,325 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-14 20:42:16] 2025-04-14 20:42:06,325 | INFO     | found 0 job(s) in 20 queues
[2025-04-14 20:42:16] 2025-04-14 20:42:06,325 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-14 20:42:16] 2025-04-14 20:42:06,325 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-14 20:42:16] 2025-04-14 20:42:06,659 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-14 20:42:16] 2025-04-14 20:42:06,759 | INFO     | all job control threads have been joined
[2025-04-14 20:42:16] 2025-04-14 20:42:07,023 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-14 20:42:16] 2025-04-14 20:42:07,023 | INFO     | aborting loop
[2025-04-14 20:42:16] 2025-04-14 20:42:07,259 | INFO     | all data control threads have been joined
[2025-04-14 20:42:16] 2025-04-14 20:42:07,327 | INFO     | [job] retrieve thread has finished
[2025-04-14 20:42:16] 2025-04-14 20:42:07,603 | INFO     | [payload] failed_post thread has finished
[2025-04-14 20:42:16] 2025-04-14 20:42:07,651 | INFO     | all payload control threads have been joined
[2025-04-14 20:42:16] 2025-04-14 20:42:07,763 | INFO     | [job] control thread has finished
[2025-04-14 20:42:16] 2025-04-14 20:42:07,842 | INFO     | [payload] validate_pre thread has finished
[2025-04-14 20:42:16] 2025-04-14 20:42:07,858 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-14 20:42:16] 2025-04-14 20:42:08,027 | INFO     | [job] job monitor thread has finished
[2025-04-14 20:42:16] 2025-04-14 20:42:08,083 | INFO     | [payload] validate_post thread has finished
[2025-04-14 20:42:16] 2025-04-14 20:42:08,091 | INFO     | [job] validate thread has finished
[2025-04-14 20:42:16] 2025-04-14 20:42:08,264 | INFO     | [data] control thread has finished
[2025-04-14 20:42:16] 2025-04-14 20:42:08,583 | INFO     | [data] copytool_in thread has finished
[2025-04-14 20:42:16] 2025-04-14 20:42:08,583 | INFO     | [payload] execute_payloads thread has finished
[2025-04-14 20:42:16] 2025-04-14 20:42:08,655 | INFO     | [payload] control thread has finished
[2025-04-14 20:42:16] 2025-04-14 20:42:08,663 | INFO     | [data] copytool_out thread has finished
[2025-04-14 20:42:16] 2025-04-14 20:42:08,771 | INFO     | [job] create_data_payload thread has finished
[2025-04-14 20:42:16] 2025-04-14 20:42:08,823 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-14 20:42:16] 2025-04-14 20:42:09,827 | INFO     | [job] queue monitor thread has finished
[2025-04-14 20:42:16] 2025-04-14 20:42:10,327 | INFO     | [data] queue_monitor thread has finished
[2025-04-14 20:42:16] 2025-04-14 20:42:11,051 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140350822258496)>', '<ExcThread(monitor, started 140350354069248)>']
[2025-04-14 20:42:16] 2025-04-14 20:42:11,343 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-14 20:42:16] 2025-04-14 20:42:11,343 | INFO     | [monitor] control thread has ended
[2025-04-14 20:42:16] 2025-04-14 20:42:16,075 | INFO     | all workflow threads have been joined
[2025-04-14 20:42:16] 2025-04-14 20:42:16,075 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-14 20:42:16] 2025-04-14 20:42:16,075 | INFO     | traces error code: 0
[2025-04-14 20:42:16] 2025-04-14 20:42:16,075 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-14 20:42:16] 2025-04-14 20:42:16,223 [wrapper] ==== pilot stdout END ====
[2025-04-14 20:42:16] 2025-04-14 20:42:16,227 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-14 20:42:16] 2025-04-14 20:42:16,231 [wrapper] pilotpid: 3009747
[2025-04-14 20:42:16] 2025-04-14 20:42:16,234 [wrapper] Pilot exit status: 0
[2025-04-14 20:42:16] 2025-04-14 20:42:16,248 [wrapper] pandaids: 6602123900
[2025-04-14 20:42:16] 2025-04-14 20:42:16,371 [wrapper] cleanup supervisor_pilot 3548563 3009748
[2025-04-14 20:42:16] 2025-04-14 20:42:16,375 [wrapper] Test setup, not cleaning
[2025-04-14 20:42:16] 2025-04-14 20:42:16,379 [wrapper] apfmon messages muted
[2025-04-14 20:42:16] 2025-04-14 20:42:16,383 [wrapper] ==== wrapper stdout END ====
[2025-04-14 20:42:16] 2025-04-14 20:42:16,388 [wrapper] ==== wrapper stderr END ====
[2025-04-14 20:42:16]  *** Error codes and diagnostics ***
[2025-04-14 20:42:16]     "exeErrorCode": 0,
[2025-04-14 20:42:16]     "exeErrorDiag": "",
[2025-04-14 20:42:16]     "pilotErrorCode": 0,
[2025-04-14 20:42:16]     "pilotErrorDiag": "",
[2025-04-14 20:42:16]  *** Listing of results directory ***
[2025-04-14 20:42:16] total 412976
[2025-04-14 20:42:16] -rw-r--r-- 1 boinc boinc      5111 Apr 14 08:33 queuedata.json
[2025-04-14 20:42:16] -rw-r--r-- 1 boinc boinc    495897 Apr 14 08:33 pilot3.tar.gz
[2025-04-14 20:42:16] -rwx------ 1 boinc boinc     37140 Apr 14 08:34 runpilot2-wrapper.sh
[2025-04-14 20:42:16] -rw-rw-r-- 1 boinc boinc       100 Apr 14 18:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-14 20:42:16] -rwxr-xr-x 1 boinc boinc      7986 Apr 14 18:14 run_atlas
[2025-04-14 20:42:16] -rw-rw-r-- 1 boinc boinc       105 Apr 14 18:14 job.xml
[2025-04-14 20:42:16] -rw-r--r-- 2 boinc boinc     17569 Apr 14 18:14 start_atlas.sh
[2025-04-14 20:42:16] drwxrwx--x 2 boinc boinc      4096 Apr 14 18:14 shared
[2025-04-14 20:42:16] -rw-r--r-- 2 boinc boinc    508891 Apr 14 18:14 input.tar.gz
[2025-04-14 20:42:16] -rw-rw-r-- 1 boinc boinc      6942 Apr 14 18:14 init_data.xml
[2025-04-14 20:42:16] -rw-r--r-- 2 boinc boinc 225703075 Apr 14 18:14 EVNT.44075481._000583.pool.root.1
[2025-04-14 20:42:16] -rw-rw-r-- 1 boinc boinc         0 Apr 14 18:14 boinc_lockfile
[2025-04-14 20:42:16] -rw-rw-r-- 1 boinc boinc      2574 Apr 14 18:14 pandaJob.out
[2025-04-14 20:42:16] -rw------- 1 boinc boinc       424 Apr 14 18:14 setup.sh.local
[2025-04-14 20:42:16] -rw------- 1 boinc boinc    986083 Apr 14 18:14 agis_schedconf.cvmfs.json
[2025-04-14 20:42:16] -rw------- 1 boinc boinc   1603529 Apr 14 18:14 agis_ddmendpoints.agis.ALL.json
[2025-04-14 20:42:16] drwx------ 4 boinc boinc      4096 Apr 14 18:14 pilot3
[2025-04-14 20:42:16] -rw------- 1 boinc boinc 191002163 Apr 14 20:41 HITS.44075483._014763.pool.root.1
[2025-04-14 20:42:16] -rw------- 1 boinc boinc        95 Apr 14 20:41 pilot_heartbeat.json
[2025-04-14 20:42:16] -rw-rw-r-- 1 boinc boinc       530 Apr 14 20:41 boinc_task_state.xml
[2025-04-14 20:42:16] -rw------- 1 boinc boinc      1024 Apr 14 20:41 memory_monitor_summary.json
[2025-04-14 20:42:16] -rw------- 1 boinc boinc    384638 Apr 14 20:41 log.44075483._014763.job.log.tgz.1
[2025-04-14 20:42:16] -rw------- 1 boinc boinc      7642 Apr 14 20:42 heartbeat.json
[2025-04-14 20:42:16] -rw-rw-r-- 1 boinc boinc        27 Apr 14 20:42 wrapper_checkpoint.txt
[2025-04-14 20:42:16] -rw-rw-r-- 1 boinc boinc      8192 Apr 14 20:42 boinc_mmap_file
[2025-04-14 20:42:16] -rw------- 1 boinc boinc      4501 Apr 14 20:42 pilotlog.txt
[2025-04-14 20:42:16] -rw------- 1 boinc boinc    783602 Apr 14 20:42 log.44075483._014763.job.log.1
[2025-04-14 20:42:16] -rw------- 1 boinc boinc       357 Apr 14 20:42 output.list
[2025-04-14 20:42:16] -rw-rw-r-- 1 boinc boinc       620 Apr 14 20:42 runtime_log
[2025-04-14 20:42:16] -rw------- 1 boinc boinc   1187840 Apr 14 20:42 result.tar.gz
[2025-04-14 20:42:16] -rw-rw-r-- 1 boinc boinc     11427 Apr 14 20:42 runtime_log.err
[2025-04-14 20:42:16] -rw------- 1 boinc boinc       652 Apr 14 20:42 rAPKDmyRUO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmRrVLDmUyGlQo.diag
[2025-04-14 20:42:16] -rw-rw-r-- 1 boinc boinc     20604 Apr 14 20:42 stderr.txt
[2025-04-14 20:42:16] HITS file was successfully produced:
[2025-04-14 20:42:16] -rw------- 1 boinc boinc 191002163 Apr 14 20:41 shared/HITS.pool.root.1
[2025-04-14 20:42:16]  *** Contents of shared directory: ***
[2025-04-14 20:42:16] total 408632
[2025-04-14 20:42:16] -rw-r--r-- 2 boinc boinc     17569 Apr 14 18:14 start_atlas.sh
[2025-04-14 20:42:16] -rw-r--r-- 2 boinc boinc    508891 Apr 14 18:14 input.tar.gz
[2025-04-14 20:42:16] -rw-r--r-- 2 boinc boinc 225703075 Apr 14 18:14 ATLAS.root_0
[2025-04-14 20:42:16] -rw------- 1 boinc boinc 191002163 Apr 14 20:41 HITS.pool.root.1
[2025-04-14 20:42:16] -rw------- 1 boinc boinc   1187840 Apr 14 20:42 result.tar.gz
20:42:18 (2996441): run_atlas exited; CPU time 46062.267134
20:42:18 (2996441): called boinc_finish(0)

</stderr_txt>
]]>

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