Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
19:05:09 (3279149): wrapper (7.7.26015): starting
19:05:09 (3279149): wrapper: running run_atlas (--nthreads 12)
[2025-04-14 19:05:09] Arguments: --nthreads 12
[2025-04-14 19:05:09] Threads: 12
[2025-04-14 19:05:09] Checking for CVMFS
[2025-04-14 19:05:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-14 19:05:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-14 19:05:11] Running cvmfs_config stat atlas.cern.ch
[2025-04-14 19:05:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-14 19:05:13] 2.12.6.0 4038419 5187 116148 144860 1 104 3092918 4096001 17442 130560 0 39260221 99.979 1315377 418 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-14 19:05:13] CVMFS is ok
[2025-04-14 19:05:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-14 19:05:13] Checking for apptainer binary...
[2025-04-14 19:05:13] apptainer is not installed, using version from CVMFS
[2025-04-14 19:05:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-14 19:05:16] epyc7v12
[2025-04-14 19:05:16] apptainer works
[2025-04-14 19:05:16] Set ATHENA_PROC_NUMBER=12
[2025-04-14 19:05:16] Set ATHENA_CORE_NUMBER=12
[2025-04-14 19:05:16] Starting ATLAS job with PandaID=6602116653
[2025-04-14 19:05:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-14 21:33:10]  *** The last 200 lines of the pilot log: ***
[2025-04-14 21:33:10] 2025-04-14 21:32:43,424 | INFO     | -- intersect: -332996767357.5282
[2025-04-14 21:33:10] 2025-04-14 21:32:43,425 | INFO     | intersect: -332996767357.5282
[2025-04-14 21:33:10] 2025-04-14 21:32:43,425 | INFO     | chi2: 10.170471195531537
[2025-04-14 21:33:10] 2025-04-14 21:32:43,425 | INFO     | current chi2=10.170471195531537 (change=7.473473193830927 %)
[2025-04-14 21:33:10] 2025-04-14 21:32:43,425 | INFO     | right removable region: 130
[2025-04-14 21:33:10] 2025-04-14 21:32:43,425 | INFO     | sum of square deviations: 697084350.9618305
[2025-04-14 21:33:10] 2025-04-14 21:32:43,426 | INFO     | sum of deviations: 84086924756.9542
[2025-04-14 21:33:10] 2025-04-14 21:32:43,426 | INFO     | mean x: 1744662267.1755726
[2025-04-14 21:33:10] 2025-04-14 21:32:43,426 | INFO     | mean y: 2451736.610687023
[2025-04-14 21:33:10] 2025-04-14 21:32:43,426 | INFO     | -- intersect: -210450249695.96295
[2025-04-14 21:33:10] 2025-04-14 21:32:43,426 | INFO     | intersect: -210450249695.96295
[2025-04-14 21:33:10] 2025-04-14 21:32:43,427 | INFO     | chi2: 5.971621981655398
[2025-04-14 21:33:10] 2025-04-14 21:32:43,427 | INFO     | current chi2=5.971621981655398 (change=45.67277850364437 %)
[2025-04-14 21:33:10] 2025-04-14 21:32:43,427 | INFO     | sum of square deviations: 620266593.3015863
[2025-04-14 21:33:10] 2025-04-14 21:32:43,428 | INFO     | sum of deviations: 48946623552.07932
[2025-04-14 21:33:10] 2025-04-14 21:32:43,428 | INFO     | mean x: 1744662419.6825397
[2025-04-14 21:33:10] 2025-04-14 21:32:43,428 | INFO     | mean y: 2521422.626984127
[2025-04-14 21:33:10] 2025-04-14 21:32:43,428 | INFO     | -- intersect: -137672690500.54706
[2025-04-14 21:33:10] 2025-04-14 21:32:43,428 | INFO     | intersect: -137672690500.54706
[2025-04-14 21:33:10] 2025-04-14 21:32:43,428 | INFO     | chi2: 3.378295770674057
[2025-04-14 21:33:10] 2025-04-14 21:32:43,429 | INFO     | current chi2=3.378295770674057 (change=43.427501254231146 %)
[2025-04-14 21:33:10] 2025-04-14 21:32:43,429 | INFO     | sum of square deviations: 549309410.6280998
[2025-04-14 21:33:10] 2025-04-14 21:32:43,429 | INFO     | sum of deviations: 24427796853.70248
[2025-04-14 21:33:10] 2025-04-14 21:32:43,430 | INFO     | mean x: 1744662572.1900826
[2025-04-14 21:33:10] 2025-04-14 21:32:43,430 | INFO     | mean y: 2574060.752066116
[2025-04-14 21:33:10] 2025-04-14 21:32:43,430 | INFO     | -- intersect: -77582593910.4031
[2025-04-14 21:33:10] 2025-04-14 21:32:43,430 | INFO     | intersect: -77582593910.4031
[2025-04-14 21:33:10] 2025-04-14 21:32:43,430 | INFO     | chi2: 2.169467245782468
[2025-04-14 21:33:10] 2025-04-14 21:32:43,430 | INFO     | current chi2=2.169467245782468 (change=35.78219927885108 %)
[2025-04-14 21:33:10] 2025-04-14 21:32:43,430 | INFO     | sum of square deviations: 483980240.43965524
[2025-04-14 21:33:10] 2025-04-14 21:32:43,431 | INFO     | sum of deviations: 1722067854.2844753
[2025-04-14 21:33:10] 2025-04-14 21:32:43,431 | INFO     | mean x: 1744662724.6982758
[2025-04-14 21:33:10] 2025-04-14 21:32:43,431 | INFO     | mean y: 2627130.922413793
[2025-04-14 21:33:10] 2025-04-14 21:32:43,432 | INFO     | -- intersect: -6205121334.266986
[2025-04-14 21:33:10] 2025-04-14 21:32:43,432 | INFO     | intersect: -6205121334.266986
[2025-04-14 21:33:10] 2025-04-14 21:32:43,432 | INFO     | chi2: 1.0358058988648127
[2025-04-14 21:33:10] 2025-04-14 21:32:43,432 | INFO     | current chi2=1.0358058988648127 (change=52.255287519161165 %)
[2025-04-14 21:33:10] 2025-04-14 21:32:43,432 | INFO     | sum of square deviations: 424046520.23423517
[2025-04-14 21:33:10] 2025-04-14 21:32:43,433 | INFO     | sum of deviations: -7478183214.45946
[2025-04-14 21:33:10] 2025-04-14 21:32:43,433 | INFO     | mean x: 1744662877.2072072
[2025-04-14 21:33:10] 2025-04-14 21:32:43,433 | INFO     | mean y: 2650426.3243243243
[2025-04-14 21:33:10] 2025-04-14 21:32:43,433 | INFO     | -- intersect: 30770285628.27014
[2025-04-14 21:33:10] 2025-04-14 21:32:43,433 | INFO     | intersect: 30770285628.27014
[2025-04-14 21:33:10] 2025-04-14 21:32:43,433 | INFO     | chi2: 0.8227302282836059
[2025-04-14 21:33:10] 2025-04-14 21:32:43,434 | INFO     | current chi2=0.8227302282836059 (change=20.571003777322204 %)
[2025-04-14 21:33:10] 2025-04-14 21:32:43,434 | INFO     | left removable region: 50
[2025-04-14 21:33:10] 2025-04-14 21:32:43,434 | INFO     | sum of square deviations: 158745680.80000016
[2025-04-14 21:33:10] 2025-04-14 21:32:43,434 | INFO     | sum of deviations: -1075435125.5000012
[2025-04-14 21:33:10] 2025-04-14 21:32:43,434 | INFO     | mean x: 1744663456.7
[2025-04-14 21:33:10] 2025-04-14 21:32:43,434 | INFO     | mean y: 2670603.3125
[2025-04-14 21:33:10] 2025-04-14 21:32:43,435 | INFO     | -- intersect: 11822030689.558252
[2025-04-14 21:33:10] 2025-04-14 21:32:43,435 | INFO     | intersect: 11822030689.558252
[2025-04-14 21:33:10] 2025-04-14 21:32:43,435 | INFO     | chi2: 0.0048958374185704735
[2025-04-14 21:33:10] 2025-04-14 21:32:43,435 | INFO     | -- intersect: 11822030689.558252
[2025-04-14 21:33:10] 2025-04-14 21:32:43,435 | INFO     | current memory leak: -6.77 B/s (using 80 data points, chi2=0.00)
[2025-04-14 21:33:10] 2025-04-14 21:32:43,436 | INFO     | ..............................
[2025-04-14 21:33:10] 2025-04-14 21:32:43,436 | INFO     | . Timing measurements:
[2025-04-14 21:33:10] 2025-04-14 21:32:43,436 | INFO     | . get job = 0 s
[2025-04-14 21:33:10] 2025-04-14 21:32:43,436 | INFO     | . initial setup = 10 s
[2025-04-14 21:33:10] 2025-04-14 21:32:43,436 | INFO     | . payload setup = 122 s
[2025-04-14 21:33:10] 2025-04-14 21:32:43,436 | INFO     | . stage-in = 0 s
[2025-04-14 21:33:10] 2025-04-14 21:32:43,436 | INFO     | . payload execution = 8348 s
[2025-04-14 21:33:10] 2025-04-14 21:32:43,436 | INFO     | . stage-out = 3 s
[2025-04-14 21:33:10] 2025-04-14 21:32:43,436 | INFO     | . log creation = 1 s
[2025-04-14 21:33:10] 2025-04-14 21:32:43,437 | INFO     | ..............................
[2025-04-14 21:33:10] 2025-04-14 21:32:43,663 | INFO     | 
[2025-04-14 21:33:10] 2025-04-14 21:32:43,663 | INFO     | job summary report
[2025-04-14 21:33:10] 2025-04-14 21:32:43,664 | INFO     | --------------------------------------------------
[2025-04-14 21:33:10] 2025-04-14 21:32:43,664 | INFO     | PanDA job id: 6602116653
[2025-04-14 21:33:10] 2025-04-14 21:32:43,664 | INFO     | task id: 44075483
[2025-04-14 21:33:10] 2025-04-14 21:32:43,664 | INFO     | errors: (none)
[2025-04-14 21:33:10] 2025-04-14 21:32:43,664 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-14 21:33:10] 2025-04-14 21:32:43,664 | INFO     | pilot state: finished 
[2025-04-14 21:33:10] 2025-04-14 21:32:43,664 | INFO     | transexitcode: 0
[2025-04-14 21:33:10] 2025-04-14 21:32:43,664 | INFO     | exeerrorcode: 0
[2025-04-14 21:33:10] 2025-04-14 21:32:43,664 | INFO     | exeerrordiag: 
[2025-04-14 21:33:10] 2025-04-14 21:32:43,664 | INFO     | exitcode: 0
[2025-04-14 21:33:10] 2025-04-14 21:32:43,665 | INFO     | exitmsg: OK
[2025-04-14 21:33:10] 2025-04-14 21:32:43,665 | INFO     | cpuconsumptiontime: 44118 s
[2025-04-14 21:33:10] 2025-04-14 21:32:43,665 | INFO     | nevents: 400
[2025-04-14 21:33:10] 2025-04-14 21:32:43,665 | INFO     | neventsw: 0
[2025-04-14 21:33:10] 2025-04-14 21:32:43,665 | INFO     | pid: 3292990
[2025-04-14 21:33:10] 2025-04-14 21:32:43,665 | INFO     | pgrp: 3292990
[2025-04-14 21:33:10] 2025-04-14 21:32:43,665 | INFO     | corecount: 12
[2025-04-14 21:33:10] 2025-04-14 21:32:43,665 | INFO     | event service: False
[2025-04-14 21:33:10] 2025-04-14 21:32:43,665 | INFO     | sizes: {0: 2417159, 1: 2417414, 2: 2417442, 13: 2417442, 24: 2417498, 35: 2417526, 46: 2417682, 57: 2417710, 66: 2417944, 67: 2417972, 8474: 2445657, 8475: 2445936
[2025-04-14 21:33:10] 2025-04-14 21:32:43,665 | INFO     | --------------------------------------------------
[2025-04-14 21:33:10] 2025-04-14 21:32:43,666 | INFO     | 
[2025-04-14 21:33:10] 2025-04-14 21:32:43,666 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/8
[2025-04-14 21:33:10] 2025-04-14 21:32:43,956 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-14 21:33:10] 2025-04-14 21:32:43,957 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-14 21:33:10] 2025-04-14 21:32:43,957 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-14 21:33:10] 2025-04-14 21:32:43,957 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-14 21:33:10] 2025-04-14 21:32:43,957 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-14 21:33:10] 2025-04-14 21:32:43,957 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-14 21:33:10] 2025-04-14 21:32:43,957 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-14 21:33:10] 2025-04-14 21:32:43,957 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-14 21:33:10] 2025-04-14 21:32:43,957 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-14 21:33:10] 2025-04-14 21:32:43,958 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-14 21:33:10] 2025-04-14 21:32:43,958 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-14 21:33:10] 2025-04-14 21:32:43,958 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-14 21:33:10] 2025-04-14 21:32:43,958 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-14 21:33:10] 2025-04-14 21:32:43,958 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-14 21:33:10] 2025-04-14 21:32:43,958 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-14 21:33:10] 2025-04-14 21:32:43,958 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-14 21:33:10] 2025-04-14 21:32:43,958 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-14 21:33:10] 2025-04-14 21:32:43,958 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-14 21:33:10] 2025-04-14 21:32:43,958 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-14 21:33:10] 2025-04-14 21:32:43,958 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-14 21:33:10] 2025-04-14 21:32:43,959 | INFO     | job 6602116653 has completed (purged errors)
[2025-04-14 21:33:10] 2025-04-14 21:32:43,959 | INFO     | overall cleanup function is called
[2025-04-14 21:33:10] 2025-04-14 21:32:44,514 | INFO     | PID=3283353 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-14 21:33:10] 2025-04-14 21:32:44,515 | INFO     | .. there are 20 such processes running
[2025-04-14 21:33:10] 2025-04-14 21:32:44,999 | INFO     | --- collectZombieJob: --- 10, [3292990]
[2025-04-14 21:33:10] 2025-04-14 21:32:44,999 | INFO     | zombie collector waiting for pid 3292990
[2025-04-14 21:33:10] 2025-04-14 21:32:44,999 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-14 21:33:10] 2025-04-14 21:32:44,999 | INFO     | collected zombie processes
[2025-04-14 21:33:10] 2025-04-14 21:32:44,999 | INFO     | will attempt to kill all subprocesses of pid=3292990
[2025-04-14 21:33:10] 2025-04-14 21:32:46,939 | INFO     | process IDs to be killed: [3292990] (in reverse order)
[2025-04-14 21:33:10] 2025-04-14 21:32:52,360 | WARNING  | found no corresponding commands to process id(s)
[2025-04-14 21:33:10] 2025-04-14 21:32:52,360 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-14 21:33:10] 2025-04-14 21:32:52,423 | INFO     | did not find any defunct processes belonging to 3292990
[2025-04-14 21:33:10] 2025-04-14 21:32:52,480 | INFO     | did not find any defunct processes belonging to 3292990
[2025-04-14 21:33:10] 2025-04-14 21:32:52,480 | INFO     | ready for new job
[2025-04-14 21:33:10] 2025-04-14 21:32:52,480 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-14 21:33:10] 2025-04-14 21:32:52,482 | INFO     | **************************************
[2025-04-14 21:33:10] 2025-04-14 21:32:52,491 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-14 21:33:10] 2025-04-14 21:32:52,491 | INFO     | **************************************
[2025-04-14 21:33:10] 2025-04-14 21:32:52,491 | INFO     | 
[2025-04-14 21:33:10] 2025-04-14 21:32:52,549 | INFO     | architecture information:
[2025-04-14 21:33:10] 2025-04-14 21:32:52,559 | INFO     | executing command: cat /etc/os-release
[2025-04-14 21:33:10] 2025-04-14 21:32:52,740 | INFO     | cat /etc/os-release:
[2025-04-14 21:33:10] NAME="CentOS Linux"
[2025-04-14 21:33:10] VERSION="7 (Core)"
[2025-04-14 21:33:10] ID="centos"
[2025-04-14 21:33:10] ID_LIKE="rhel fedora"
[2025-04-14 21:33:10] VERSION_ID="7"
[2025-04-14 21:33:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-14 21:33:10] ANSI_COLOR="0;31"
[2025-04-14 21:33:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-14 21:33:10] HOME_URL="https://www.centos.org/"
[2025-04-14 21:33:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-14 21:33:10] 
[2025-04-14 21:33:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-14 21:33:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-14 21:33:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-14 21:33:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-14 21:33:10] 
[2025-04-14 21:33:10] 2025-04-14 21:32:52,740 | INFO     | **************************************
[2025-04-14 21:33:10] 2025-04-14 21:32:53,255 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/8
[2025-04-14 21:33:10] 2025-04-14 21:32:53,467 | INFO     | sufficient remaining disk space (316856598528 B)
[2025-04-14 21:33:10] 2025-04-14 21:32:53,468 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-14 21:33:10] 2025-04-14 21:32:53,468 | INFO     | current server update state: UPDATING_FINAL
[2025-04-14 21:33:10] 2025-04-14 21:32:53,468 | INFO     | update_server=False
[2025-04-14 21:33:10] 2025-04-14 21:32:53,468 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-14 21:33:10] 2025-04-14 21:32:53,469 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-14 21:33:10] 2025-04-14 21:32:53,469 | INFO     | found 0 job(s) in 20 queues
[2025-04-14 21:33:10] 2025-04-14 21:32:53,469 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-14 21:33:10] 2025-04-14 21:32:53,469 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-14 21:33:10] 2025-04-14 21:32:53,471 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-14 21:33:10] 2025-04-14 21:32:53,474 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-14 21:33:10] 2025-04-14 21:32:53,474 | INFO     | aborting loop
[2025-04-14 21:33:10] 2025-04-14 21:32:54,271 | INFO     | all data control threads have been joined
[2025-04-14 21:33:10] 2025-04-14 21:32:54,471 | INFO     | all payload control threads have been joined
[2025-04-14 21:33:10] 2025-04-14 21:32:54,475 | INFO     | [job] retrieve thread has finished
[2025-04-14 21:33:10] 2025-04-14 21:32:54,479 | INFO     | [job] job monitor thread has finished
[2025-04-14 21:33:10] 2025-04-14 21:32:54,475 | INFO     | [job] queue monitor thread has finished
[2025-04-14 21:33:10] 2025-04-14 21:32:54,487 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-14 21:33:10] 2025-04-14 21:32:54,775 | INFO     | [payload] execute_payloads thread has finished
[2025-04-14 21:33:10] 2025-04-14 21:32:54,776 | INFO     | [job] create_data_payload thread has finished
[2025-04-14 21:33:10] 2025-04-14 21:32:54,991 | INFO     | all job control threads have been joined
[2025-04-14 21:33:10] 2025-04-14 21:32:55,163 | INFO     | [data] copytool_in thread has finished
[2025-04-14 21:33:10] 2025-04-14 21:32:55,207 | INFO     | [payload] failed_post thread has finished
[2025-04-14 21:33:10] 2025-04-14 21:32:55,275 | INFO     | [data] control thread has finished
[2025-04-14 21:33:10] 2025-04-14 21:32:55,347 | INFO     | [payload] validate_post thread has finished
[2025-04-14 21:33:10] 2025-04-14 21:32:55,435 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-14 21:33:10] 2025-04-14 21:32:55,475 | INFO     | [payload] control thread has finished
[2025-04-14 21:33:10] 2025-04-14 21:32:55,487 | INFO     | [payload] validate_pre thread has finished
[2025-04-14 21:33:10] 2025-04-14 21:32:55,883 | INFO     | [job] validate thread has finished
[2025-04-14 21:33:10] 2025-04-14 21:32:55,995 | INFO     | [job] control thread has finished
[2025-04-14 21:33:10] 2025-04-14 21:32:56,251 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-14 21:33:10] 2025-04-14 21:32:56,495 | INFO     | [data] copytool_out thread has finished
[2025-04-14 21:33:10] 2025-04-14 21:33:00,267 | INFO     | [data] queue_monitor thread has finished
[2025-04-14 21:33:10] 2025-04-14 21:33:02,087 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139667887802176)>', '<ExcThread(monitor, started 139667219404544)>']
[2025-04-14 21:33:10] 2025-04-14 21:33:02,519 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-14 21:33:10] 2025-04-14 21:33:02,519 | INFO     | [monitor] control thread has ended
[2025-04-14 21:33:10] 2025-04-14 21:33:07,115 | INFO     | all workflow threads have been joined
[2025-04-14 21:33:10] 2025-04-14 21:33:07,115 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-14 21:33:10] 2025-04-14 21:33:07,115 | INFO     | traces error code: 0
[2025-04-14 21:33:10] 2025-04-14 21:33:07,116 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-14 21:33:10] 2025-04-14 21:33:07,856 [wrapper] ==== pilot stdout END ====
[2025-04-14 21:33:10] 2025-04-14 21:33:07,923 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-14 21:33:10] 2025-04-14 21:33:07,999 [wrapper] pilotpid: 3283353
[2025-04-14 21:33:10] 2025-04-14 21:33:08,071 [wrapper] Pilot exit status: 0
[2025-04-14 21:33:10] 2025-04-14 21:33:08,391 [wrapper] pandaids: 6602116653
[2025-04-14 21:33:10] 2025-04-14 21:33:08,773 [wrapper] cleanup supervisor_pilot 3859119 3283354
[2025-04-14 21:33:10] 2025-04-14 21:33:08,824 [wrapper] Test setup, not cleaning
[2025-04-14 21:33:10] 2025-04-14 21:33:08,903 [wrapper] apfmon messages muted
[2025-04-14 21:33:10] 2025-04-14 21:33:08,971 [wrapper] ==== wrapper stdout END ====
[2025-04-14 21:33:10] 2025-04-14 21:33:09,055 [wrapper] ==== wrapper stderr END ====
[2025-04-14 21:33:10]  *** Error codes and diagnostics ***
[2025-04-14 21:33:10]     "exeErrorCode": 0,
[2025-04-14 21:33:10]     "exeErrorDiag": "",
[2025-04-14 21:33:10]     "pilotErrorCode": 0,
[2025-04-14 21:33:10]     "pilotErrorDiag": "",
[2025-04-14 21:33:10]  *** Listing of results directory ***
[2025-04-14 21:33:10] total 416396
[2025-04-14 21:33:10] -rw-r--r-- 1 boinc boinc      5111 Apr 14 04:43 queuedata.json
[2025-04-14 21:33:10] -rw-r--r-- 1 boinc boinc    495897 Apr 14 04:43 pilot3.tar.gz
[2025-04-14 21:33:10] -rwx------ 1 boinc boinc     37140 Apr 14 04:44 runpilot2-wrapper.sh
[2025-04-14 21:33:10] -rw-rw-r-- 1 boinc boinc       100 Apr 14 19:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-14 21:33:10] -rwxr-xr-x 1 boinc boinc      7986 Apr 14 19:05 run_atlas
[2025-04-14 21:33:10] -rw-rw-r-- 1 boinc boinc       105 Apr 14 19:05 job.xml
[2025-04-14 21:33:10] -rw-rw-r-- 1 boinc boinc      6941 Apr 14 19:05 init_data.xml
[2025-04-14 21:33:10] -rw-r--r-- 2 boinc boinc 226959838 Apr 14 19:05 EVNT.44075481._000508.pool.root.1
[2025-04-14 21:33:10] -rw-r--r-- 2 boinc boinc     17569 Apr 14 19:05 start_atlas.sh
[2025-04-14 21:33:10] drwxrwx--x 2 boinc boinc      4096 Apr 14 19:05 shared
[2025-04-14 21:33:10] -rw-r--r-- 2 boinc boinc    508893 Apr 14 19:05 input.tar.gz
[2025-04-14 21:33:10] -rw-rw-r-- 1 boinc boinc         0 Apr 14 19:05 boinc_lockfile
[2025-04-14 21:33:10] -rw-rw-r-- 1 boinc boinc      2577 Apr 14 19:05 pandaJob.out
[2025-04-14 21:33:10] -rw------- 1 boinc boinc       424 Apr 14 19:05 setup.sh.local
[2025-04-14 21:33:10] -rw------- 1 boinc boinc    986091 Apr 14 19:07 agis_schedconf.cvmfs.json
[2025-04-14 21:33:10] -rw------- 1 boinc boinc   1603529 Apr 14 19:07 agis_ddmendpoints.agis.ALL.json
[2025-04-14 21:33:10] drwx------ 4 boinc boinc      4096 Apr 14 19:07 pilot3
[2025-04-14 21:33:10] -rw------- 1 boinc boinc 193265413 Apr 14 21:29 HITS.44075483._012900.pool.root.1
[2025-04-14 21:33:10] -rw-rw-r-- 1 boinc boinc       530 Apr 14 21:29 boinc_task_state.xml
[2025-04-14 21:33:10] -rw------- 1 boinc boinc      1024 Apr 14 21:31 memory_monitor_summary.json
[2025-04-14 21:33:10] -rw------- 1 boinc boinc    396497 Apr 14 21:31 log.44075483._012900.job.log.tgz.1
[2025-04-14 21:33:10] -rw------- 1 boinc boinc        95 Apr 14 21:32 pilot_heartbeat.json
[2025-04-14 21:33:10] -rw------- 1 boinc boinc      7656 Apr 14 21:32 heartbeat.json
[2025-04-14 21:33:10] -rw------- 1 boinc boinc      4500 Apr 14 21:33 pilotlog.txt
[2025-04-14 21:33:10] -rw-rw-r-- 1 boinc boinc        27 Apr 14 21:33 wrapper_checkpoint.txt
[2025-04-14 21:33:10] -rw-rw-r-- 1 boinc boinc      8192 Apr 14 21:33 boinc_mmap_file
[2025-04-14 21:33:10] -rw------- 1 boinc boinc    765413 Apr 14 21:33 log.44075483._012900.job.log.1
[2025-04-14 21:33:10] -rw------- 1 boinc boinc       357 Apr 14 21:33 output.list
[2025-04-14 21:33:10] -rw-rw-r-- 1 boinc boinc       620 Apr 14 21:33 runtime_log
[2025-04-14 21:33:10] -rw------- 1 boinc boinc   1177600 Apr 14 21:33 result.tar.gz
[2025-04-14 21:33:10] -rw-rw-r-- 1 boinc boinc     11409 Apr 14 21:33 runtime_log.err
[2025-04-14 21:33:10] -rw------- 1 boinc boinc       653 Apr 14 21:33 nNLNDmJrQO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmIWVLDmJhG08n.diag
[2025-04-14 21:33:10] -rw-rw-r-- 1 boinc boinc     20826 Apr 14 21:33 stderr.txt
[2025-04-14 21:33:10] HITS file was successfully produced:
[2025-04-14 21:33:10] -rw------- 1 boinc boinc 193265413 Apr 14 21:29 shared/HITS.pool.root.1
[2025-04-14 21:33:10]  *** Contents of shared directory: ***
[2025-04-14 21:33:10] total 412060
[2025-04-14 21:33:10] -rw-r--r-- 2 boinc boinc 226959838 Apr 14 19:05 ATLAS.root_0
[2025-04-14 21:33:10] -rw-r--r-- 2 boinc boinc     17569 Apr 14 19:05 start_atlas.sh
[2025-04-14 21:33:10] -rw-r--r-- 2 boinc boinc    508893 Apr 14 19:05 input.tar.gz
[2025-04-14 21:33:10] -rw------- 1 boinc boinc 193265413 Apr 14 21:29 HITS.pool.root.1
[2025-04-14 21:33:10] -rw------- 1 boinc boinc   1177600 Apr 14 21:33 result.tar.gz
21:33:12 (3279149): run_atlas exited; CPU time 44605.758239
21:33:12 (3279149): called boinc_finish(0)

</stderr_txt>
]]>

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