Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
15:01:59 (26360): wrapper (7.7.26015): starting
15:01:59 (26360): wrapper: running run_atlas (--nthreads 12)
[2025-04-14 15:01:59] Arguments: --nthreads 12
[2025-04-14 15:01:59] Threads: 12
[2025-04-14 15:01:59] Checking for CVMFS
[2025-04-14 15:01:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-14 15:01:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-14 15:01:59] Running cvmfs_config stat atlas.cern.ch
[2025-04-14 15:01:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-14 15:01:59] 2.10.0.0 8334 338 68060 144861 2 187 14326430 16777216 929 130560 0 534010 99.992 138420 9901 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-04-14 15:01:59] CVMFS is ok
[2025-04-14 15:01:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-14 15:01:59] Checking for apptainer binary...
[2025-04-14 15:01:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-14 15:01:59] Running /usr/bin/apptainer --version
[2025-04-14 15:01:59] apptainer version 1.3.6-150600.4.9.1
[2025-04-14 15:01:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-14 15:01:59] boinc-runner
[2025-04-14 15:01:59] apptainer works
[2025-04-14 15:01:59] Set ATHENA_PROC_NUMBER=12
[2025-04-14 15:01:59] Set ATHENA_CORE_NUMBER=12
[2025-04-14 15:01:59] Starting ATLAS job with PandaID=6601728051
[2025-04-14 15:01:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-14 15:39:01]  *** The last 200 lines of the pilot log: ***
[2025-04-14 15:39:01]  mtime=0
[2025-04-14 15:39:01]  protocol_id=None
[2025-04-14 15:39:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-14 15:39:01]  replicas=None
[2025-04-14 15:39:01]  scope=mc23_13p6TeV
[2025-04-14 15:39:01]  status=None
[2025-04-14 15:39:01]  status_code=0
[2025-04-14 15:39:01]  storage_token=
[2025-04-14 15:39:01]  surl=/var/lib/boinc/slots/17/PanDA_Pilot-6601728051/log.44075483._004728.job.log.tgz.1
[2025-04-14 15:39:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/4e/log.44075483._004728.job.log.tgz.1
[2025-04-14 15:39:01]  workdir=None
[2025-04-14 15:39:01] ]
[2025-04-14 15:39:01] 2025-04-14 20:38:33,644 | INFO     | transferring file log.44075483._004728.job.log.tgz.1 from /var/lib/boinc/slots/17/PanDA_Pilot-6601728051/log.44075483._004728.job.log.tgz.1 to /var/lib/boinc/slots
[2025-04-14 15:39:01] 2025-04-14 20:38:33,645 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/17/PanDA_Pilot-6601728051/log.44075483._004728.job.log.tgz.1 /var/lib/boinc/slots/17/log.44075483._004728.j
[2025-04-14 15:39:01] 2025-04-14 20:38:33,656 | INFO     | adding to output.list: log.44075483._004728.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/4e/log.44075483._004728.job.log.tg
[2025-04-14 15:39:01] 2025-04-14 20:38:33,657 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-14 15:39:01] 2025-04-14 20:38:33,657 | INFO     | summary of transferred files:
[2025-04-14 15:39:01] 2025-04-14 20:38:33,657 | INFO     |  -- lfn=log.44075483._004728.job.log.tgz.1, status_code=0, status=transferred
[2025-04-14 15:39:01] 2025-04-14 20:38:33,657 | INFO     | stage-out finished correctly
[2025-04-14 15:39:01] 2025-04-14 20:38:33,757 | INFO     | monitor loop #168: job 0:6601728051 is in state 'finished'
[2025-04-14 15:39:01] 2025-04-14 20:38:33,757 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-14 15:39:01] 2025-04-14 20:38:36,260 | INFO     | monitor loop #169: job 0:6601728051 is in state 'finished'
[2025-04-14 15:39:01] 2025-04-14 20:38:36,260 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-14 15:39:01] 2025-04-14 20:38:36,281 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-14 15:39:01] 2025-04-14 20:38:38,761 | INFO     | monitor loop #170: job 0:6601728051 is in state 'finished'
[2025-04-14 15:39:01] 2025-04-14 20:38:38,761 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-14 15:39:01] 2025-04-14 20:38:39,173 | INFO     | job 6601728051 has state=finished
[2025-04-14 15:39:01] 2025-04-14 20:38:39,174 | INFO     | preparing for final server update for job 6601728051 in state='finished'
[2025-04-14 15:39:01] 2025-04-14 20:38:39,174 | INFO     | this job has now completed (state=finished)
[2025-04-14 15:39:01] 2025-04-14 20:38:39,174 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-14 15:39:01] 2025-04-14 20:38:39,174 | INFO     | log transfer has been attempted: DONE
[2025-04-14 15:39:01] 2025-04-14 20:38:39,174 | INFO     | job 6601728051 has finished - writing final server update
[2025-04-14 15:39:01] 2025-04-14 20:38:39,174 | INFO     | total number of processed events: 400 (read)
[2025-04-14 15:39:01] 2025-04-14 20:38:39,176 | INFO     | executing command: lscpu
[2025-04-14 15:39:01] 2025-04-14 20:38:39,196 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-14 15:39:01] 2025-04-14 20:38:40,585 | INFO     | PID=30530 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-14 15:39:01] 2025-04-14 20:38:40,586 | INFO     | .. there are 2 such processes running
[2025-04-14 15:39:01] 2025-04-14 20:38:41,132 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-14 15:39:01] 2025-04-14 20:38:41,132 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-6601728051/memory_monitor_summary.json (trf name=prmon)
[2025-04-14 15:39:01] 2025-04-14 20:38:41,132 | INFO     | extracted standard info from prmon json
[2025-04-14 15:39:01] 2025-04-14 20:38:41,132 | INFO     | extracted standard memory fields from prmon json
[2025-04-14 15:39:01] 2025-04-14 20:38:41,132 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-14 15:39:01] 2025-04-14 20:38:41,133 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-14 15:39:01] 2025-04-14 20:38:41,133 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-14 15:39:01] 2025-04-14 20:38:41,133 | INFO     | fitting pss+swap vs Time
[2025-04-14 15:39:01] 2025-04-14 20:38:41,133 | INFO     | sum of square deviations: 7553630.0
[2025-04-14 15:39:01] 2025-04-14 20:38:41,134 | INFO     | sum of deviations: 2636637221.0
[2025-04-14 15:39:01] 2025-04-14 20:38:41,134 | INFO     | mean x: 1744662105.0
[2025-04-14 15:39:01] 2025-04-14 20:38:41,134 | INFO     | mean y: 2616607.0344827585
[2025-04-14 15:39:01] 2025-04-14 20:38:41,134 | INFO     | -- intersect: -608981546518.6694
[2025-04-14 15:39:01] 2025-04-14 20:38:41,134 | INFO     | intersect: -608981546518.6694
[2025-04-14 15:39:01] 2025-04-14 20:38:41,134 | INFO     | chi2: 0.5886650854552372
[2025-04-14 15:39:01] 2025-04-14 20:38:41,134 | INFO     | -- intersect: -608981546518.6694
[2025-04-14 15:39:01] 2025-04-14 20:38:41,134 | INFO     | current memory leak: 349.06 B/s (using 29 data points, chi2=0.59)
[2025-04-14 15:39:01] 2025-04-14 20:38:41,134 | INFO     | ..............................
[2025-04-14 15:39:01] 2025-04-14 20:38:41,134 | INFO     | . Timing measurements:
[2025-04-14 15:39:01] 2025-04-14 20:38:41,134 | INFO     | . get job = 0 s
[2025-04-14 15:39:01] 2025-04-14 20:38:41,134 | INFO     | . initial setup = 3 s
[2025-04-14 15:39:01] 2025-04-14 20:38:41,134 | INFO     | . payload setup = 2 s
[2025-04-14 15:39:01] 2025-04-14 20:38:41,134 | INFO     | . stage-in = 0 s
[2025-04-14 15:39:01] 2025-04-14 20:38:41,134 | INFO     | . payload execution = 2166 s
[2025-04-14 15:39:01] 2025-04-14 20:38:41,134 | INFO     | . stage-out = 0 s
[2025-04-14 15:39:01] 2025-04-14 20:38:41,134 | INFO     | . log creation = 0 s
[2025-04-14 15:39:01] 2025-04-14 20:38:41,135 | INFO     | ..............................
[2025-04-14 15:39:01] 2025-04-14 20:38:41,657 | INFO     | 
[2025-04-14 15:39:01] 2025-04-14 20:38:41,657 | INFO     | job summary report
[2025-04-14 15:39:01] 2025-04-14 20:38:41,657 | INFO     | --------------------------------------------------
[2025-04-14 15:39:01] 2025-04-14 20:38:41,657 | INFO     | PanDA job id: 6601728051
[2025-04-14 15:39:01] 2025-04-14 20:38:41,657 | INFO     | task id: 44075483
[2025-04-14 15:39:01] 2025-04-14 20:38:41,657 | INFO     | errors: (none)
[2025-04-14 15:39:01] 2025-04-14 20:38:41,657 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-14 15:39:01] 2025-04-14 20:38:41,657 | INFO     | pilot state: finished 
[2025-04-14 15:39:01] 2025-04-14 20:38:41,657 | INFO     | transexitcode: 0
[2025-04-14 15:39:01] 2025-04-14 20:38:41,657 | INFO     | exeerrorcode: 0
[2025-04-14 15:39:01] 2025-04-14 20:38:41,658 | INFO     | exeerrordiag: 
[2025-04-14 15:39:01] 2025-04-14 20:38:41,658 | INFO     | exitcode: 0
[2025-04-14 15:39:01] 2025-04-14 20:38:41,658 | INFO     | exitmsg: OK
[2025-04-14 15:39:01] 2025-04-14 20:38:41,658 | INFO     | cpuconsumptiontime: 19890 s
[2025-04-14 15:39:01] 2025-04-14 20:38:41,658 | INFO     | nevents: 400
[2025-04-14 15:39:01] 2025-04-14 20:38:41,658 | INFO     | neventsw: 0
[2025-04-14 15:39:01] 2025-04-14 20:38:41,658 | INFO     | pid: 5108
[2025-04-14 15:39:01] 2025-04-14 20:38:41,658 | INFO     | pgrp: 5108
[2025-04-14 15:39:01] 2025-04-14 20:38:41,658 | INFO     | corecount: 12
[2025-04-14 15:39:01] 2025-04-14 20:38:41,658 | INFO     | event service: False
[2025-04-14 15:39:01] 2025-04-14 20:38:41,658 | INFO     | sizes: {0: 2417360, 2: 2417566, 10: 2417594, 2172: 2442647, 2173: 2451590, 2175: 2451646, 2180: 2451944}
[2025-04-14 15:39:01] 2025-04-14 20:38:41,658 | INFO     | --------------------------------------------------
[2025-04-14 15:39:01] 2025-04-14 20:38:41,658 | INFO     | 
[2025-04-14 15:39:01] 2025-04-14 20:38:41,658 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-04-14 15:39:01] 2025-04-14 20:38:41,671 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-14 15:39:01] 2025-04-14 20:38:41,671 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-14 15:39:01] 2025-04-14 20:38:41,671 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-14 15:39:01] 2025-04-14 20:38:41,671 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-14 15:39:01] 2025-04-14 20:38:41,671 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-14 15:39:01] 2025-04-14 20:38:41,671 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-14 15:39:01] 2025-04-14 20:38:41,671 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-14 15:39:01] 2025-04-14 20:38:41,671 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-14 15:39:01] 2025-04-14 20:38:41,671 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-14 15:39:01] 2025-04-14 20:38:41,671 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-14 15:39:01] 2025-04-14 20:38:41,671 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-14 15:39:01] 2025-04-14 20:38:41,671 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-14 15:39:01] 2025-04-14 20:38:41,671 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-14 15:39:01] 2025-04-14 20:38:41,671 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-14 15:39:01] 2025-04-14 20:38:41,671 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-14 15:39:01] 2025-04-14 20:38:41,671 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-14 15:39:01] 2025-04-14 20:38:41,671 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-14 15:39:01] 2025-04-14 20:38:41,671 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-14 15:39:01] 2025-04-14 20:38:41,671 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-14 15:39:01] 2025-04-14 20:38:41,671 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-14 15:39:01] 2025-04-14 20:38:41,671 | INFO     | job 6601728051 has completed (purged errors)
[2025-04-14 15:39:01] 2025-04-14 20:38:41,672 | INFO     | overall cleanup function is called
[2025-04-14 15:39:01] 2025-04-14 20:38:42,677 | INFO     | --- collectZombieJob: --- 10, [5108]
[2025-04-14 15:39:01] 2025-04-14 20:38:42,677 | INFO     | zombie collector waiting for pid 5108
[2025-04-14 15:39:01] 2025-04-14 20:38:42,678 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-14 15:39:01] 2025-04-14 20:38:42,678 | INFO     | collected zombie processes
[2025-04-14 15:39:01] 2025-04-14 20:38:42,678 | INFO     | will attempt to kill all subprocesses of pid=5108
[2025-04-14 15:39:01] 2025-04-14 20:38:42,729 | INFO     | process IDs to be killed: [5108] (in reverse order)
[2025-04-14 15:39:01] 2025-04-14 20:38:42,757 | WARNING  | found no corresponding commands to process id(s)
[2025-04-14 15:39:01] 2025-04-14 20:38:42,758 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-14 15:39:01] 2025-04-14 20:38:42,760 | INFO     | did not find any defunct processes belonging to 5108
[2025-04-14 15:39:01] 2025-04-14 20:38:42,762 | INFO     | did not find any defunct processes belonging to 5108
[2025-04-14 15:39:01] 2025-04-14 20:38:42,762 | INFO     | ready for new job
[2025-04-14 15:39:01] 2025-04-14 20:38:42,762 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-14 15:39:01] 2025-04-14 20:38:42,763 | INFO     | **************************************
[2025-04-14 15:39:01] 2025-04-14 20:38:42,763 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-14 15:39:01] 2025-04-14 20:38:42,763 | INFO     | **************************************
[2025-04-14 15:39:01] 2025-04-14 20:38:42,763 | INFO     | 
[2025-04-14 15:39:01] 2025-04-14 20:38:42,764 | INFO     | architecture information:
[2025-04-14 15:39:01] 2025-04-14 20:38:42,764 | INFO     | executing command: cat /etc/os-release
[2025-04-14 15:39:01] 2025-04-14 20:38:42,773 | INFO     | cat /etc/os-release:
[2025-04-14 15:39:01] NAME="CentOS Linux"
[2025-04-14 15:39:01] VERSION="7 (Core)"
[2025-04-14 15:39:01] ID="centos"
[2025-04-14 15:39:01] ID_LIKE="rhel fedora"
[2025-04-14 15:39:01] VERSION_ID="7"
[2025-04-14 15:39:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-14 15:39:01] ANSI_COLOR="0;31"
[2025-04-14 15:39:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-14 15:39:01] HOME_URL="https://www.centos.org/"
[2025-04-14 15:39:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-14 15:39:01] 
[2025-04-14 15:39:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-14 15:39:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-14 15:39:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-14 15:39:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-14 15:39:01] 
[2025-04-14 15:39:01] 2025-04-14 20:38:42,773 | INFO     | **************************************
[2025-04-14 15:39:01] 2025-04-14 20:38:43,276 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-04-14 15:39:01] 2025-04-14 20:38:43,285 | INFO     | sufficient remaining disk space (3884543115264 B)
[2025-04-14 15:39:01] 2025-04-14 20:38:43,286 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-14 15:39:01] 2025-04-14 20:38:43,286 | INFO     | current server update state: UPDATING_FINAL
[2025-04-14 15:39:01] 2025-04-14 20:38:43,286 | INFO     | update_server=False
[2025-04-14 15:39:01] 2025-04-14 20:38:43,286 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-14 15:39:01] 2025-04-14 20:38:43,286 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-14 15:39:01] 2025-04-14 20:38:43,286 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-14 15:39:01] 2025-04-14 20:38:43,286 | INFO     | found 0 job(s) in 20 queues
[2025-04-14 15:39:01] 2025-04-14 20:38:43,287 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-14 15:39:01] 2025-04-14 20:38:43,287 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-14 15:39:01] 2025-04-14 20:38:43,767 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-14 15:39:01] 2025-04-14 20:38:43,767 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-14 15:39:01] 2025-04-14 20:38:43,767 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-14 15:39:01] 2025-04-14 20:38:43,767 | INFO     | will abort loop
[2025-04-14 15:39:01] 2025-04-14 20:38:43,811 | INFO     | all payload control threads have been joined
[2025-04-14 15:39:01] 2025-04-14 20:38:43,943 | INFO     | all data control threads have been joined
[2025-04-14 15:39:01] 2025-04-14 20:38:44,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-14 15:39:01] 2025-04-14 20:38:44,291 | INFO     | [job] retrieve thread has finished
[2025-04-14 15:39:01] 2025-04-14 20:38:44,421 | INFO     | [job] create_data_payload thread has finished
[2025-04-14 15:39:01] 2025-04-14 20:38:44,460 | INFO     | all job control threads have been joined
[2025-04-14 15:39:01] 2025-04-14 20:38:44,673 | INFO     | [payload] failed_post thread has finished
[2025-04-14 15:39:01] 2025-04-14 20:38:44,713 | INFO     | [job] validate thread has finished
[2025-04-14 15:39:01] 2025-04-14 20:38:44,729 | INFO     | [payload] execute_payloads thread has finished
[2025-04-14 15:39:01] 2025-04-14 20:38:44,773 | INFO     | [job] job monitor thread has finished
[2025-04-14 15:39:01] 2025-04-14 20:38:44,816 | INFO     | [payload] control thread has finished
[2025-04-14 15:39:01] 2025-04-14 20:38:44,893 | INFO     | [payload] validate_pre thread has finished
[2025-04-14 15:39:01] 2025-04-14 20:38:44,948 | INFO     | [data] control thread has finished
[2025-04-14 15:39:01] 2025-04-14 20:38:45,169 | INFO     | [data] copytool_in thread has finished
[2025-04-14 15:39:01] 2025-04-14 20:38:45,461 | INFO     | [job] control thread has finished
[2025-04-14 15:39:01] 2025-04-14 20:38:45,498 | INFO     | [payload] validate_post thread has finished
[2025-04-14 15:39:01] 2025-04-14 20:38:46,193 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-14 15:39:01] 2025-04-14 20:38:46,213 | INFO     | [data] copytool_out thread has finished
[2025-04-14 15:39:01] 2025-04-14 20:38:47,199 | INFO     | [job] queue monitor thread has finished
[2025-04-14 15:39:01] 2025-04-14 20:38:47,289 | INFO     | [data] queue_monitor thread has finished
[2025-04-14 15:39:01] 2025-04-14 20:38:53,403 | INFO     | job.realtimelogging is not enabled
[2025-04-14 15:39:01] 2025-04-14 20:38:54,405 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-14 15:39:01] 2025-04-14 20:38:55,997 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140550695991104)>', '<ExcThread(monitor, started 140550338483968)>']
[2025-04-14 15:39:01] 2025-04-14 20:38:56,338 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-14 15:39:01] 2025-04-14 20:38:56,338 | INFO     | [monitor] control thread has ended
[2025-04-14 15:39:01] 2025-04-14 20:39:01,021 | INFO     | all workflow threads have been joined
[2025-04-14 15:39:01] 2025-04-14 20:39:01,021 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-14 15:39:01] 2025-04-14 20:39:01,022 | INFO     | traces error code: 0
[2025-04-14 15:39:01] 2025-04-14 20:39:01,022 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-14 15:39:01] 2025-04-14 20:39:01,080 [wrapper] ==== pilot stdout END ====
[2025-04-14 15:39:01] 2025-04-14 20:39:01,081 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-14 15:39:01] 2025-04-14 20:39:01,082 [wrapper] pilotpid: 30530
[2025-04-14 15:39:01] 2025-04-14 20:39:01,084 [wrapper] Pilot exit status: 0
[2025-04-14 15:39:01] 2025-04-14 20:39:01,090 [wrapper] pandaids: 6601728051
[2025-04-14 15:39:01] 2025-04-14 20:39:01,108 [wrapper] cleanup supervisor_pilot 17607 30531
[2025-04-14 15:39:01] 2025-04-14 20:39:01,109 [wrapper] Test setup, not cleaning
[2025-04-14 15:39:01] 2025-04-14 20:39:01,111 [wrapper] apfmon messages muted
[2025-04-14 15:39:01] 2025-04-14 20:39:01,112 [wrapper] ==== wrapper stdout END ====
[2025-04-14 15:39:01] 2025-04-14 20:39:01,114 [wrapper] ==== wrapper stderr END ====
[2025-04-14 15:39:01]  *** Error codes and diagnostics ***
[2025-04-14 15:39:01]     "exeErrorCode": 0,
[2025-04-14 15:39:01]     "exeErrorDiag": "",
[2025-04-14 15:39:01]     "pilotErrorCode": 0,
[2025-04-14 15:39:01]     "pilotErrorDiag": "",
[2025-04-14 15:39:01]  *** Listing of results directory ***
[2025-04-14 15:39:01] total 407856
[2025-04-14 15:39:01] -rw-r--r-- 1 boinc boinc    495897 Apr 13 07:15 pilot3.tar.gz
[2025-04-14 15:39:01] -rw-r--r-- 1 boinc boinc      5111 Apr 13 07:49 queuedata.json
[2025-04-14 15:39:01] -rwx------ 1 boinc boinc     37140 Apr 13 07:50 runpilot2-wrapper.sh
[2025-04-14 15:39:01] -rw-r--r-- 1 boinc boinc       100 Apr 14 15:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-14 15:39:01] -rwxr-xr-x 1 boinc boinc      7986 Apr 14 15:01 run_atlas
[2025-04-14 15:39:01] -rw-r--r-- 1 boinc boinc       105 Apr 14 15:01 job.xml
[2025-04-14 15:39:01] -rw-r--r-- 2 boinc boinc     17569 Apr 14 15:01 start_atlas.sh
[2025-04-14 15:39:01] drwxrwx--x 1 boinc boinc        76 Apr 14 15:01 shared
[2025-04-14 15:39:01] -rw-r--r-- 2 boinc boinc    508892 Apr 14 15:01 input.tar.gz
[2025-04-14 15:39:01] -rw-r--r-- 1 boinc boinc     10045 Apr 14 15:01 init_data.xml
[2025-04-14 15:39:01] -rw-r--r-- 2 boinc boinc 221186105 Apr 14 15:01 EVNT.44075481._000181.pool.root.1
[2025-04-14 15:39:01] -rw-r--r-- 1 boinc boinc         0 Apr 14 15:01 boinc_lockfile
[2025-04-14 15:39:01] -rw-r--r-- 1 boinc boinc      2575 Apr 14 15:01 pandaJob.out
[2025-04-14 15:39:01] -rw------- 1 boinc boinc       473 Apr 14 15:02 setup.sh.local
[2025-04-14 15:39:01] -rw------- 1 boinc boinc    986091 Apr 14 15:02 agis_schedconf.cvmfs.json
[2025-04-14 15:39:01] -rw------- 1 boinc boinc   1603529 Apr 14 15:02 agis_ddmendpoints.agis.ALL.json
[2025-04-14 15:39:01] drwx------ 1 boinc boinc       368 Apr 14 15:02 pilot3
[2025-04-14 15:39:01] -rw------- 1 boinc boinc 191445380 Apr 14 15:38 HITS.44075483._004728.pool.root.1
[2025-04-14 15:39:01] -rw-r--r-- 1 boinc boinc       529 Apr 14 15:38 boinc_task_state.xml
[2025-04-14 15:39:01] -rw------- 1 boinc boinc        95 Apr 14 15:38 pilot_heartbeat.json
[2025-04-14 15:39:01] -rw------- 1 boinc boinc      1024 Apr 14 15:38 memory_monitor_summary.json
[2025-04-14 15:39:01] -rw------- 1 boinc boinc    343340 Apr 14 15:38 log.44075483._004728.job.log.tgz.1
[2025-04-14 15:39:01] -rw------- 1 boinc boinc      7676 Apr 14 15:38 heartbeat.json
[2025-04-14 15:39:01] -rw-r--r-- 1 boinc boinc        27 Apr 14 15:38 wrapper_checkpoint.txt
[2025-04-14 15:39:01] -rw-r--r-- 1 boinc boinc      8192 Apr 14 15:38 boinc_mmap_file
[2025-04-14 15:39:01] -rw------- 1 boinc boinc      4737 Apr 14 15:39 pilotlog.txt
[2025-04-14 15:39:01] -rw------- 1 boinc boinc    249127 Apr 14 15:39 log.44075483._004728.job.log.1
[2025-04-14 15:39:01] -rw------- 1 boinc boinc       357 Apr 14 15:39 output.list
[2025-04-14 15:39:01] -rw-r--r-- 1 boinc boinc       620 Apr 14 15:39 runtime_log
[2025-04-14 15:39:01] -rw------- 1 boinc boinc    614400 Apr 14 15:39 result.tar.gz
[2025-04-14 15:39:01] -rw-r--r-- 1 boinc boinc     11496 Apr 14 15:39 runtime_log.err
[2025-04-14 15:39:01] -rw------- 1 boinc boinc       652 Apr 14 15:39 e2ALDmtxBO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmfxTLDmZ3VNLn.diag
[2025-04-14 15:39:01] -rw-r--r-- 1 boinc boinc     21358 Apr 14 15:39 stderr.txt
[2025-04-14 15:39:01] HITS file was successfully produced:
[2025-04-14 15:39:01] -rw------- 1 boinc boinc 191445380 Apr 14 15:38 shared/HITS.pool.root.1
[2025-04-14 15:39:01]  *** Contents of shared directory: ***
[2025-04-14 15:39:01] total 404084
[2025-04-14 15:39:01] -rw-r--r-- 2 boinc boinc     17569 Apr 14 15:01 start_atlas.sh
[2025-04-14 15:39:01] -rw-r--r-- 2 boinc boinc    508892 Apr 14 15:01 input.tar.gz
[2025-04-14 15:39:01] -rw-r--r-- 2 boinc boinc 221186105 Apr 14 15:01 ATLAS.root_0
[2025-04-14 15:39:01] -rw------- 1 boinc boinc 191445380 Apr 14 15:38 HITS.pool.root.1
[2025-04-14 15:39:01] -rw------- 1 boinc boinc    614400 Apr 14 15:39 result.tar.gz
15:39:02 (26360): run_atlas exited; CPU time 19903.252859
15:39:02 (26360): called boinc_finish(0)

</stderr_txt>
]]>

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