Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:29:39 (104852): wrapper (7.7.26015): starting
15:29:39 (104852): wrapper: running run_atlas (--nthreads 12)
[2025-04-14 15:29:39] Arguments: --nthreads 12
[2025-04-14 15:29:39] Threads: 12
[2025-04-14 15:29:39] Checking for CVMFS
[2025-04-14 15:29:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-14 15:29:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-14 15:29:39] Running cvmfs_config stat atlas.cern.ch
[2025-04-14 15:29:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-14 15:29:39] 2.11.5.0 2581 16179 219416 144867 0 115 42536223 45568001 9839 130560 0 150190558 99.748 138662933 25595 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-04-14 15:29:39] CVMFS is ok
[2025-04-14 15:29:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-14 15:29:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-14 15:29:39] Further information can be found at the LHC@home message board.
[2025-04-14 15:29:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-14 15:29:39] Checking for apptainer binary...
[2025-04-14 15:29:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-14 15:29:39] Running /usr/bin/apptainer --version
[2025-04-14 15:29:39] apptainer version 1.3.5-1.el9
[2025-04-14 15:29:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-14 15:29:39] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0058.triumf.lcg
[2025-04-14 15:29:39] apptainer works
[2025-04-14 15:29:39] Set ATHENA_PROC_NUMBER=12
[2025-04-14 15:29:39] Set ATHENA_CORE_NUMBER=12
[2025-04-14 15:29:39] Starting ATLAS job with PandaID=6602114604
[2025-04-14 15:29:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-14 16:49:06]  *** The last 200 lines of the pilot log: ***
[2025-04-14 16:49:06]  storage_token=
[2025-04-14 16:49:06]  surl=/home/boinc/slots/0/PanDA_Pilot-6602114604/log.44075483._012142.job.log.tgz.1
[2025-04-14 16:49:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/0c/log.44075483._012142.job.log.tgz.1
[2025-04-14 16:49:06]  workdir=None
[2025-04-14 16:49:06] ]
[2025-04-14 16:49:06] 2025-04-14 23:48:36,817 | INFO     | transferring file log.44075483._012142.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6602114604/log.44075483._012142.job.log.tgz.1 to /home/boinc/slots/0/log.
[2025-04-14 16:49:06] 2025-04-14 23:48:36,817 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6602114604/log.44075483._012142.job.log.tgz.1 /home/boinc/slots/0/log.44075483._012142.job.log.t
[2025-04-14 16:49:06] 2025-04-14 23:48:36,894 | INFO     | adding to output.list: log.44075483._012142.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/0c/log.44075483._012142.job.log.tg
[2025-04-14 16:49:06] 2025-04-14 23:48:36,895 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-14 16:49:06] 2025-04-14 23:48:36,895 | INFO     | summary of transferred files:
[2025-04-14 16:49:06] 2025-04-14 23:48:36,895 | INFO     |  -- lfn=log.44075483._012142.job.log.tgz.1, status_code=0, status=transferred
[2025-04-14 16:49:06] 2025-04-14 23:48:36,895 | INFO     | stage-out finished correctly
[2025-04-14 16:49:06] 2025-04-14 23:48:36,982 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-14 16:49:06] 2025-04-14 23:48:39,822 | INFO     | job 6602114604 has state=finished
[2025-04-14 16:49:06] 2025-04-14 23:48:39,822 | INFO     | preparing for final server update for job 6602114604 in state='finished'
[2025-04-14 16:49:06] 2025-04-14 23:48:39,823 | INFO     | this job has now completed (state=finished)
[2025-04-14 16:49:06] 2025-04-14 23:48:39,823 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-14 16:49:06] 2025-04-14 23:48:39,823 | INFO     | log transfer has been attempted: DONE
[2025-04-14 16:49:06] 2025-04-14 23:48:39,823 | INFO     | job 6602114604 has finished - writing final server update
[2025-04-14 16:49:06] 2025-04-14 23:48:39,823 | INFO     | total number of processed events: 400 (read)
[2025-04-14 16:49:06] 2025-04-14 23:48:39,836 | INFO     | executing command: lscpu
[2025-04-14 16:49:06] 2025-04-14 23:48:40,066 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-14 16:49:06] 2025-04-14 23:48:42,150 | INFO     | PID=108432 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-14 16:49:06] 2025-04-14 23:48:42,151 | INFO     | .. there are 14 such processes running
[2025-04-14 16:49:06] 2025-04-14 23:48:42,168 | WARNING  | process 114879 can no longer be monitored (due to stat problems) - aborting
[2025-04-14 16:49:06] 2025-04-14 23:48:42,168 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6602114604/memory_monitor_summary.json (trf name=prmon)
[2025-04-14 16:49:06] 2025-04-14 23:48:42,169 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6602114604/memory_monitor_summary.json (trf name=prmon)
[2025-04-14 16:49:06] 2025-04-14 23:48:42,170 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3882181 B
[2025-04-14 16:49:06] 2025-04-14 23:48:42,170 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16263 B
[2025-04-14 16:49:06] 2025-04-14 23:48:42,170 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-04-14 16:49:06] 2025-04-14 23:48:45,685 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-14 16:49:06] 2025-04-14 23:48:45,685 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6602114604/memory_monitor_summary.json (trf name=prmon)
[2025-04-14 16:49:06] 2025-04-14 23:48:45,685 | INFO     | extracted standard info from prmon json
[2025-04-14 16:49:06] 2025-04-14 23:48:45,686 | INFO     | extracted standard memory fields from prmon json
[2025-04-14 16:49:06] 2025-04-14 23:48:45,686 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-14 16:49:06] 2025-04-14 23:48:45,691 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-14 16:49:06] 2025-04-14 23:48:45,691 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-14 16:49:06] 2025-04-14 23:48:45,693 | INFO     | fitting pss+swap vs Time
[2025-04-14 16:49:06] 2025-04-14 23:48:45,693 | INFO     | sum of square deviations: 110959741.29577465
[2025-04-14 16:49:06] 2025-04-14 23:48:45,693 | INFO     | sum of deviations: 12206971209.33803
[2025-04-14 16:49:06] 2025-04-14 23:48:45,693 | INFO     | mean x: 1744672249.1549296
[2025-04-14 16:49:06] 2025-04-14 23:48:45,693 | INFO     | mean y: 2783273.6056338027
[2025-04-14 16:49:06] 2025-04-14 23:48:45,693 | INFO     | -- intersect: -191933171753.50156
[2025-04-14 16:49:06] 2025-04-14 23:48:45,693 | INFO     | intersect: -191933171753.50156
[2025-04-14 16:49:06] 2025-04-14 23:48:45,693 | INFO     | chi2: 2.248774683348878
[2025-04-14 16:49:06] 2025-04-14 23:48:45,693 | INFO     | -- intersect: -191933171753.50156
[2025-04-14 16:49:06] 2025-04-14 23:48:45,693 | INFO     | current memory leak: 110.01 B/s (using 71 data points, chi2=2.25)
[2025-04-14 16:49:06] 2025-04-14 23:48:45,694 | INFO     | ..............................
[2025-04-14 16:49:06] 2025-04-14 23:48:45,694 | INFO     | . Timing measurements:
[2025-04-14 16:49:06] 2025-04-14 23:48:45,694 | INFO     | . get job = 0 s
[2025-04-14 16:49:06] 2025-04-14 23:48:45,694 | INFO     | . initial setup = 2 s
[2025-04-14 16:49:06] 2025-04-14 23:48:45,694 | INFO     | . payload setup = 3 s
[2025-04-14 16:49:06] 2025-04-14 23:48:45,694 | INFO     | . stage-in = 0 s
[2025-04-14 16:49:06] 2025-04-14 23:48:45,694 | INFO     | . payload execution = 4707 s
[2025-04-14 16:49:06] 2025-04-14 23:48:45,694 | INFO     | . stage-out = 0 s
[2025-04-14 16:49:06] 2025-04-14 23:48:45,694 | INFO     | . log creation = 0 s
[2025-04-14 16:49:06] 2025-04-14 23:48:45,694 | INFO     | ..............................
[2025-04-14 16:49:06] 2025-04-14 23:48:45,863 | INFO     | sufficient remaining disk space (1093064982528 B)
[2025-04-14 16:49:06] 2025-04-14 23:48:45,863 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-04-14 16:49:06] 2025-04-14 23:48:45,863 | INFO     | size of work directory /home/boinc/slots/0/PanDA_Pilot-6602114604: 4180546 B (within 2537553920 B limit)
[2025-04-14 16:49:06] 2025-04-14 23:48:45,864 | INFO     | pfn file=/home/boinc/slots/0/PanDA_Pilot-6602114604/HITS.44075483._012142.pool.root.1 does not exist (skip from workdir size calculation)
[2025-04-14 16:49:06] 2025-04-14 23:48:45,864 | INFO     | total size of present files: 0 B (workdir size: 4180546 B)
[2025-04-14 16:49:06] 2025-04-14 23:48:45,908 | INFO     | output file size check: skipping output file /home/boinc/slots/0/PanDA_Pilot-6602114604/HITS.44075483._012142.pool.root.1 since it does not exist
[2025-04-14 16:49:06] 2025-04-14 23:48:46,095 | INFO     | number of running child processes to parent process 114879: 1
[2025-04-14 16:49:06] 2025-04-14 23:48:46,095 | INFO     | maximum number of monitored processes: 6
[2025-04-14 16:49:06] 2025-04-14 23:48:46,095 | INFO     | aborting job monitoring since job object (job id=6602114604) has expired
[2025-04-14 16:49:06] 2025-04-14 23:48:46,433 | INFO     | 
[2025-04-14 16:49:06] 2025-04-14 23:48:46,433 | INFO     | job summary report
[2025-04-14 16:49:06] 2025-04-14 23:48:46,433 | INFO     | --------------------------------------------------
[2025-04-14 16:49:06] 2025-04-14 23:48:46,433 | INFO     | PanDA job id: 6602114604
[2025-04-14 16:49:06] 2025-04-14 23:48:46,433 | INFO     | task id: 44075483
[2025-04-14 16:49:06] 2025-04-14 23:48:46,433 | INFO     | errors: (none)
[2025-04-14 16:49:06] 2025-04-14 23:48:46,433 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-14 16:49:06] 2025-04-14 23:48:46,433 | INFO     | pilot state: finished 
[2025-04-14 16:49:06] 2025-04-14 23:48:46,433 | INFO     | transexitcode: 0
[2025-04-14 16:49:06] 2025-04-14 23:48:46,433 | INFO     | exeerrorcode: 0
[2025-04-14 16:49:06] 2025-04-14 23:48:46,433 | INFO     | exeerrordiag: 
[2025-04-14 16:49:06] 2025-04-14 23:48:46,433 | INFO     | exitcode: 0
[2025-04-14 16:49:06] 2025-04-14 23:48:46,433 | INFO     | exitmsg: OK
[2025-04-14 16:49:06] 2025-04-14 23:48:46,434 | INFO     | cpuconsumptiontime: 25881 s
[2025-04-14 16:49:06] 2025-04-14 23:48:46,434 | INFO     | nevents: 400
[2025-04-14 16:49:06] 2025-04-14 23:48:46,434 | INFO     | neventsw: 0
[2025-04-14 16:49:06] 2025-04-14 23:48:46,434 | INFO     | pid: 114879
[2025-04-14 16:49:06] 2025-04-14 23:48:46,434 | INFO     | pgrp: 114879
[2025-04-14 16:49:06] 2025-04-14 23:48:46,434 | INFO     | corecount: 12
[2025-04-14 16:49:06] 2025-04-14 23:48:46,434 | INFO     | event service: False
[2025-04-14 16:49:06] 2025-04-14 23:48:46,434 | INFO     | sizes: {0: 2417310, 3: 2417516, 11: 2417544, 4714: 2443672, 4715: 2452663, 4724: 2452805}
[2025-04-14 16:49:06] 2025-04-14 23:48:46,434 | INFO     | --------------------------------------------------
[2025-04-14 16:49:06] 2025-04-14 23:48:46,434 | INFO     | 
[2025-04-14 16:49:06] 2025-04-14 23:48:46,434 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-04-14 16:49:06] 2025-04-14 23:48:46,519 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-14 16:49:06] 2025-04-14 23:48:46,519 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-14 16:49:06] 2025-04-14 23:48:46,519 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-14 16:49:06] 2025-04-14 23:48:46,519 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-14 16:49:06] 2025-04-14 23:48:46,519 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-14 16:49:06] 2025-04-14 23:48:46,519 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-14 16:49:06] 2025-04-14 23:48:46,520 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-14 16:49:06] 2025-04-14 23:48:46,520 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-14 16:49:06] 2025-04-14 23:48:46,520 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-14 16:49:06] 2025-04-14 23:48:46,520 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-14 16:49:06] 2025-04-14 23:48:46,520 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-14 16:49:06] 2025-04-14 23:48:46,520 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-14 16:49:06] 2025-04-14 23:48:46,520 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-14 16:49:06] 2025-04-14 23:48:46,520 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-14 16:49:06] 2025-04-14 23:48:46,520 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-14 16:49:06] 2025-04-14 23:48:46,520 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-14 16:49:06] 2025-04-14 23:48:46,520 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-14 16:49:06] 2025-04-14 23:48:46,520 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-14 16:49:06] 2025-04-14 23:48:46,520 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-14 16:49:06] 2025-04-14 23:48:46,520 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-14 16:49:06] 2025-04-14 23:48:46,520 | INFO     | job 6602114604 has completed (purged errors)
[2025-04-14 16:49:06] 2025-04-14 23:48:46,520 | INFO     | overall cleanup function is called
[2025-04-14 16:49:06] 2025-04-14 23:48:47,528 | INFO     | --- collectZombieJob: --- 10, [114879]
[2025-04-14 16:49:06] 2025-04-14 23:48:47,528 | INFO     | zombie collector waiting for pid 114879
[2025-04-14 16:49:06] 2025-04-14 23:48:47,528 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-14 16:49:06] 2025-04-14 23:48:47,528 | INFO     | collected zombie processes
[2025-04-14 16:49:06] 2025-04-14 23:48:47,528 | INFO     | will attempt to kill all subprocesses of pid=114879
[2025-04-14 16:49:06] 2025-04-14 23:48:47,949 | INFO     | process IDs to be killed: [114879] (in reverse order)
[2025-04-14 16:49:06] 2025-04-14 23:48:48,023 | WARNING  | found no corresponding commands to process id(s)
[2025-04-14 16:49:06] 2025-04-14 23:48:48,024 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-14 16:49:06] 2025-04-14 23:48:48,037 | INFO     | did not find any defunct processes belonging to 114879
[2025-04-14 16:49:06] 2025-04-14 23:48:48,043 | INFO     | did not find any defunct processes belonging to 114879
[2025-04-14 16:49:06] 2025-04-14 23:48:48,043 | INFO     | ready for new job
[2025-04-14 16:49:06] 2025-04-14 23:48:48,043 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-14 16:49:06] 2025-04-14 23:48:48,045 | INFO     | **************************************
[2025-04-14 16:49:06] 2025-04-14 23:48:48,074 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-14 16:49:06] 2025-04-14 23:48:48,074 | INFO     | **************************************
[2025-04-14 16:49:06] 2025-04-14 23:48:48,074 | INFO     | 
[2025-04-14 16:49:06] 2025-04-14 23:48:48,076 | INFO     | architecture information:
[2025-04-14 16:49:06] 2025-04-14 23:48:48,099 | INFO     | executing command: cat /etc/os-release
[2025-04-14 16:49:06] 2025-04-14 23:48:48,153 | INFO     | cat /etc/os-release:
[2025-04-14 16:49:06] NAME="CentOS Linux"
[2025-04-14 16:49:06] VERSION="7 (Core)"
[2025-04-14 16:49:06] ID="centos"
[2025-04-14 16:49:06] ID_LIKE="rhel fedora"
[2025-04-14 16:49:06] VERSION_ID="7"
[2025-04-14 16:49:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-14 16:49:06] ANSI_COLOR="0;31"
[2025-04-14 16:49:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-14 16:49:06] HOME_URL="https://www.centos.org/"
[2025-04-14 16:49:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-14 16:49:06] 
[2025-04-14 16:49:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-14 16:49:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-14 16:49:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-14 16:49:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-14 16:49:06] 
[2025-04-14 16:49:06] 2025-04-14 23:48:48,153 | INFO     | **************************************
[2025-04-14 16:49:06] 2025-04-14 23:48:48,657 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-04-14 16:49:06] 2025-04-14 23:48:48,747 | INFO     | sufficient remaining disk space (1093063933952 B)
[2025-04-14 16:49:06] 2025-04-14 23:48:48,747 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-14 16:49:06] 2025-04-14 23:48:48,748 | INFO     | current server update state: UPDATING_FINAL
[2025-04-14 16:49:06] 2025-04-14 23:48:48,748 | INFO     | update_server=False
[2025-04-14 16:49:06] 2025-04-14 23:48:48,748 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-14 16:49:06] 2025-04-14 23:48:48,749 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-14 16:49:06] 2025-04-14 23:48:48,749 | INFO     | found 0 job(s) in 20 queues
[2025-04-14 16:49:06] 2025-04-14 23:48:48,749 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-14 16:49:06] 2025-04-14 23:48:48,749 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-14 16:49:06] 2025-04-14 23:48:49,006 | INFO     | all data control threads have been joined
[2025-04-14 16:49:06] 2025-04-14 23:48:49,558 | INFO     | all payload control threads have been joined
[2025-04-14 16:49:06] 2025-04-14 23:48:49,608 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-14 16:49:06] 2025-04-14 23:48:49,608 | INFO     | aborting loop
[2025-04-14 16:49:06] 2025-04-14 23:48:49,753 | INFO     | [job] retrieve thread has finished
[2025-04-14 16:49:06] 2025-04-14 23:48:49,860 | INFO     | [payload] validate_post thread has finished
[2025-04-14 16:49:06] 2025-04-14 23:48:49,927 | INFO     | [payload] validate_pre thread has finished
[2025-04-14 16:49:06] 2025-04-14 23:48:50,015 | INFO     | [data] control thread has finished
[2025-04-14 16:49:06] 2025-04-14 23:48:50,029 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-14 16:49:06] 2025-04-14 23:48:50,036 | INFO     | all job control threads have been joined
[2025-04-14 16:49:06] 2025-04-14 23:48:50,109 | INFO     | [job] create_data_payload thread has finished
[2025-04-14 16:49:06] 2025-04-14 23:48:50,159 | INFO     | [job] validate thread has finished
[2025-04-14 16:49:06] 2025-04-14 23:48:50,263 | INFO     | [data] copytool_in thread has finished
[2025-04-14 16:49:06] 2025-04-14 23:48:50,505 | INFO     | [payload] execute_payloads thread has finished
[2025-04-14 16:49:06] 2025-04-14 23:48:50,564 | INFO     | [payload] control thread has finished
[2025-04-14 16:49:06] 2025-04-14 23:48:50,614 | INFO     | [job] job monitor thread has finished
[2025-04-14 16:49:06] 2025-04-14 23:48:50,724 | INFO     | [payload] failed_post thread has finished
[2025-04-14 16:49:06] 2025-04-14 23:48:50,987 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-14 16:49:06] 2025-04-14 23:48:51,042 | INFO     | [job] control thread has finished
[2025-04-14 16:49:06] 2025-04-14 23:48:51,993 | INFO     | [job] queue monitor thread has finished
[2025-04-14 16:49:06] 2025-04-14 23:48:52,036 | INFO     | [data] copytool_out thread has finished
[2025-04-14 16:49:06] 2025-04-14 23:48:52,131 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-14 16:49:06] 2025-04-14 23:48:56,140 | INFO     | [data] queue_monitor thread has finished
[2025-04-14 16:49:06] 2025-04-14 23:48:58,884 | INFO     | job.realtimelogging is not enabled
[2025-04-14 16:49:06] 2025-04-14 23:48:59,890 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-14 16:49:06] 2025-04-14 23:49:01,526 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140109290223424)>', '<ExcThread(monitor, started 140108435007232)>']
[2025-04-14 16:49:06] 2025-04-14 23:49:01,826 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-14 16:49:06] 2025-04-14 23:49:01,826 | INFO     | [monitor] control thread has ended
[2025-04-14 16:49:06] 2025-04-14 23:49:06,552 | INFO     | all workflow threads have been joined
[2025-04-14 16:49:06] 2025-04-14 23:49:06,552 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-14 16:49:06] 2025-04-14 23:49:06,552 | INFO     | traces error code: 0
[2025-04-14 16:49:06] 2025-04-14 23:49:06,552 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-14 16:49:06] 2025-04-14 23:49:06,668 [wrapper] ==== pilot stdout END ====
[2025-04-14 16:49:06] 2025-04-14 23:49:06,670 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-14 16:49:06] 2025-04-14 23:49:06,671 [wrapper] pilotpid: 108432
[2025-04-14 16:49:06] 2025-04-14 23:49:06,673 [wrapper] Pilot exit status: 0
[2025-04-14 16:49:06] 2025-04-14 23:49:06,692 [wrapper] pandaids: 6602114604
[2025-04-14 16:49:06] 2025-04-14 23:49:06,727 [wrapper] cleanup supervisor_pilot  271478 108433
[2025-04-14 16:49:06] 2025-04-14 23:49:06,729 [wrapper] Test setup, not cleaning
[2025-04-14 16:49:06] 2025-04-14 23:49:06,731 [wrapper] apfmon messages muted
[2025-04-14 16:49:06] 2025-04-14 23:49:06,733 [wrapper] ==== wrapper stdout END ====
[2025-04-14 16:49:06] 2025-04-14 23:49:06,734 [wrapper] ==== wrapper stderr END ====
[2025-04-14 16:49:06]  *** Error codes and diagnostics ***
[2025-04-14 16:49:06]     "exeErrorCode": 0,
[2025-04-14 16:49:06]     "exeErrorDiag": "",
[2025-04-14 16:49:06]     "pilotErrorCode": 0,
[2025-04-14 16:49:06]     "pilotErrorDiag": "",
[2025-04-14 16:49:06]  *** Listing of results directory ***
[2025-04-14 16:49:06] total 414680
[2025-04-14 16:49:06] -rw-r--r--. 1 boinc boinc    495897 Apr 13 20:01 pilot3.tar.gz
[2025-04-14 16:49:06] -rwx------. 1 boinc boinc     37140 Apr 13 20:10 runpilot2-wrapper.sh
[2025-04-14 16:49:06] -rw-r--r--. 1 boinc boinc      5111 Apr 13 20:10 queuedata.json
[2025-04-14 16:49:06] -rw-r--r--. 1 boinc boinc       100 Apr 14 15:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-14 16:49:06] -rwxr-xr-x. 1 boinc boinc      7986 Apr 14 15:29 run_atlas
[2025-04-14 16:49:06] -rw-r--r--. 1 boinc boinc       105 Apr 14 15:29 job.xml
[2025-04-14 16:49:06] -rw-r--r--. 1 boinc boinc      6602 Apr 14 15:29 init_data.xml
[2025-04-14 16:49:06] -rw-r--r--. 2 boinc boinc 225733737 Apr 14 15:29 EVNT.44075481._000478.pool.root.1
[2025-04-14 16:49:06] -rw-r--r--. 2 boinc boinc     17569 Apr 14 15:29 start_atlas.sh
[2025-04-14 16:49:06] drwxrwx--x. 2 boinc boinc      4096 Apr 14 15:29 shared
[2025-04-14 16:49:06] -rw-r--r--. 2 boinc boinc    508890 Apr 14 15:29 input.tar.gz
[2025-04-14 16:49:06] -rw-r--r--. 1 boinc boinc         0 Apr 14 15:29 boinc_lockfile
[2025-04-14 16:49:06] -rw-r--r--. 1 boinc boinc      2577 Apr 14 15:29 pandaJob.out
[2025-04-14 16:49:06] -rw-------. 1 boinc boinc       424 Apr 14 15:29 setup.sh.local
[2025-04-14 16:49:06] -rw-------. 1 boinc boinc    986091 Apr 14 15:29 agis_schedconf.cvmfs.json
[2025-04-14 16:49:06] -rw-------. 1 boinc boinc   1603529 Apr 14 15:29 agis_ddmendpoints.agis.ALL.json
[2025-04-14 16:49:06] drwx------. 4 boinc boinc      4096 Apr 14 15:29 pilot3
[2025-04-14 16:49:06] -rw-------. 1 boinc boinc        95 Apr 14 16:47 pilot_heartbeat.json
[2025-04-14 16:49:06] -rw-------. 1 boinc boinc 193437528 Apr 14 16:48 HITS.44075483._012142.pool.root.1
[2025-04-14 16:49:06] -rw-r--r--. 1 boinc boinc       530 Apr 14 16:48 boinc_task_state.xml
[2025-04-14 16:49:06] -rw-------. 1 boinc boinc      1041 Apr 14 16:48 memory_monitor_summary.json
[2025-04-14 16:49:06] -rw-------. 1 boinc boinc    353484 Apr 14 16:48 log.44075483._012142.job.log.tgz.1
[2025-04-14 16:49:06] -rw-r--r--. 1 boinc boinc      8192 Apr 14 16:48 boinc_mmap_file
[2025-04-14 16:49:06] -rw-r--r--. 1 boinc boinc        27 Apr 14 16:48 wrapper_checkpoint.txt
[2025-04-14 16:49:06] -rw-------. 1 boinc boinc      7726 Apr 14 16:48 heartbeat.json
[2025-04-14 16:49:06] -rw-------. 1 boinc boinc      4547 Apr 14 16:49 pilotlog.txt
[2025-04-14 16:49:06] -rw-------. 1 boinc boinc    457158 Apr 14 16:49 log.44075483._012142.job.log.1
[2025-04-14 16:49:06] -rw-------. 1 boinc boinc       357 Apr 14 16:49 output.list
[2025-04-14 16:49:06] -rw-r--r--. 1 boinc boinc       620 Apr 14 16:49 runtime_log
[2025-04-14 16:49:06] -rw-------. 1 boinc boinc    829440 Apr 14 16:49 result.tar.gz
[2025-04-14 16:49:06] -rw-------. 1 boinc boinc       658 Apr 14 16:49 tJXLDmKOPO7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmayzKDm1Qxx9n.diag
[2025-04-14 16:49:06] -rw-r--r--. 1 boinc boinc     11144 Apr 14 16:49 runtime_log.err
[2025-04-14 16:49:06] -rw-r--r--. 1 boinc boinc     22596 Apr 14 16:49 stderr.txt
[2025-04-14 16:49:07] HITS file was successfully produced:
[2025-04-14 16:49:07] -rw-------. 1 boinc boinc 193437528 Apr 14 16:48 shared/HITS.pool.root.1
[2025-04-14 16:49:07]  *** Contents of shared directory: ***
[2025-04-14 16:49:07] total 410684
[2025-04-14 16:49:07] -rw-r--r--. 2 boinc boinc 225733737 Apr 14 15:29 ATLAS.root_0
[2025-04-14 16:49:07] -rw-r--r--. 2 boinc boinc     17569 Apr 14 15:29 start_atlas.sh
[2025-04-14 16:49:07] -rw-r--r--. 2 boinc boinc    508890 Apr 14 15:29 input.tar.gz
[2025-04-14 16:49:07] -rw-------. 1 boinc boinc 193437528 Apr 14 16:48 HITS.pool.root.1
[2025-04-14 16:49:07] -rw-------. 1 boinc boinc    829440 Apr 14 16:49 result.tar.gz
16:49:08 (104852): run_atlas exited; CPU time 25923.895945
16:49:08 (104852): called boinc_finish(0)

</stderr_txt>
]]>

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