Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:05:41 (3039): wrapper (7.7.26015): starting
11:05:41 (3039): wrapper: running run_atlas (--nthreads 12)
[2025-04-14 11:05:41] Arguments: --nthreads 12
[2025-04-14 11:05:41] Threads: 12
[2025-04-14 11:05:41] Checking for CVMFS
[2025-04-14 11:05:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-14 11:05:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-14 11:05:41] Running cvmfs_config stat atlas.cern.ch
[2025-04-14 11:05:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-14 11:05:41] 2.11.2.0 13814 392336 162488 144853 3 8 14175205 20275201 1 130560 0 17786078 99.989 5430058 53248 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-14 11:05:41] CVMFS is ok
[2025-04-14 11:05:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-14 11:05:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-14 11:05:41] Further information can be found at the LHC@home message board.
[2025-04-14 11:05:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-14 11:05:41] Checking for apptainer binary...
[2025-04-14 11:05:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-14 11:05:41] Running /usr/bin/apptainer --version
[2025-04-14 11:05:41] apptainer version 1.3.2-1.el7
[2025-04-14 11:05:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-14 11:05:42] c-205-7.aglt2.org
[2025-04-14 11:05:42] apptainer works
[2025-04-14 11:05:42] Set ATHENA_PROC_NUMBER=12
[2025-04-14 11:05:42] Set ATHENA_CORE_NUMBER=12
[2025-04-14 11:05:42] Starting ATLAS job with PandaID=6602126316
[2025-04-14 11:05:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-14 12:30:54]  *** The last 200 lines of the pilot log: ***
[2025-04-14 12:30:54]  filetype=log
[2025-04-14 12:30:54]  guid=e633feeb-ec0f-4d17-8f4b-ce058dc5a47c
[2025-04-14 12:30:54]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-14 12:30:54]  is_altstaged=None
[2025-04-14 12:30:54]  is_tar=False
[2025-04-14 12:30:54]  lfn=log.44075483._016289.job.log.tgz.1
[2025-04-14 12:30:54]  mtime=0
[2025-04-14 12:30:54]  protocol_id=None
[2025-04-14 12:30:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-14 12:30:54]  replicas=None
[2025-04-14 12:30:54]  scope=mc23_13p6TeV
[2025-04-14 12:30:54]  status=None
[2025-04-14 12:30:54]  status_code=0
[2025-04-14 12:30:54]  storage_token=
[2025-04-14 12:30:54]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6602126316/log.44075483._016289.job.log.tgz.1
[2025-04-14 12:30:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0e/28/log.44075483._016289.job.log.tgz.1
[2025-04-14 12:30:54]  workdir=None
[2025-04-14 12:30:54] ]
[2025-04-14 12:30:54] 2025-04-14 16:30:29,879 | INFO     | transferring file log.44075483._016289.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6602126316/log.44075483._016289.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-14 12:30:54] 2025-04-14 16:30:29,880 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6602126316/log.44075483._016289.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._016289.job
[2025-04-14 12:30:54] 2025-04-14 16:30:29,912 | INFO     | adding to output.list: log.44075483._016289.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0e/28/log.44075483._016289.job.log.tg
[2025-04-14 12:30:54] 2025-04-14 16:30:29,913 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-14 12:30:54] 2025-04-14 16:30:29,913 | INFO     | summary of transferred files:
[2025-04-14 12:30:54] 2025-04-14 16:30:29,913 | INFO     |  -- lfn=log.44075483._016289.job.log.tgz.1, status_code=0, status=transferred
[2025-04-14 12:30:54] 2025-04-14 16:30:29,913 | INFO     | stage-out finished correctly
[2025-04-14 12:30:54] 2025-04-14 16:30:30,254 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-14 12:30:54] 2025-04-14 16:30:30,748 | INFO     | monitor loop #380: job 0:6602126316 is in state 'finished'
[2025-04-14 12:30:54] 2025-04-14 16:30:30,748 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-14 12:30:54] 2025-04-14 16:30:30,892 | INFO     | job 6602126316 has state=finished
[2025-04-14 12:30:54] 2025-04-14 16:30:30,893 | INFO     | preparing for final server update for job 6602126316 in state='finished'
[2025-04-14 12:30:54] 2025-04-14 16:30:30,893 | INFO     | this job has now completed (state=finished)
[2025-04-14 12:30:54] 2025-04-14 16:30:30,893 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-14 12:30:54] 2025-04-14 16:30:30,894 | INFO     | log transfer has been attempted: DONE
[2025-04-14 12:30:54] 2025-04-14 16:30:30,894 | INFO     | job 6602126316 has finished - writing final server update
[2025-04-14 12:30:54] 2025-04-14 16:30:30,894 | INFO     | total number of processed events: 400 (read)
[2025-04-14 12:30:54] 2025-04-14 16:30:30,896 | INFO     | executing command: lscpu
[2025-04-14 12:30:54] 2025-04-14 16:30:30,925 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-14 12:30:54] 2025-04-14 16:30:33,251 | INFO     | monitor loop #381: job 0:6602126316 is in state 'finished'
[2025-04-14 12:30:54] 2025-04-14 16:30:33,251 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-14 12:30:54] 2025-04-14 16:30:33,670 | INFO     | PID=7957 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-04-14 12:30:54] 2025-04-14 16:30:35,593 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-14 12:30:54] 2025-04-14 16:30:35,593 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6602126316/memory_monitor_summary.json (trf name=prmon)
[2025-04-14 12:30:54] 2025-04-14 16:30:35,595 | INFO     | extracted standard info from prmon json
[2025-04-14 12:30:54] 2025-04-14 16:30:35,595 | INFO     | extracted standard memory fields from prmon json
[2025-04-14 12:30:54] 2025-04-14 16:30:35,595 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-14 12:30:54] 2025-04-14 16:30:35,595 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-14 12:30:54] 2025-04-14 16:30:35,596 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-14 12:30:54] 2025-04-14 16:30:35,598 | INFO     | fitting pss+swap vs Time
[2025-04-14 12:30:54] 2025-04-14 16:30:35,598 | INFO     | sum of square deviations: 136095575.0
[2025-04-14 12:30:54] 2025-04-14 16:30:35,598 | INFO     | sum of deviations: 28040439862.0
[2025-04-14 12:30:54] 2025-04-14 16:30:35,598 | INFO     | mean x: 1744645777.5
[2025-04-14 12:30:54] 2025-04-14 16:30:35,598 | INFO     | mean y: 2539070.3157894737
[2025-04-14 12:30:54] 2025-04-14 16:30:35,598 | INFO     | -- intersect: -359455400722.958
[2025-04-14 12:30:54] 2025-04-14 16:30:35,599 | INFO     | intersect: -359455400722.958
[2025-04-14 12:30:54] 2025-04-14 16:30:35,599 | INFO     | chi2: 1.9764500775294724
[2025-04-14 12:30:54] 2025-04-14 16:30:35,599 | INFO     | -- intersect: -359455400722.958
[2025-04-14 12:30:54] 2025-04-14 16:30:35,599 | INFO     | current memory leak: 206.03 B/s (using 76 data points, chi2=1.98)
[2025-04-14 12:30:54] 2025-04-14 16:30:35,599 | INFO     | ..............................
[2025-04-14 12:30:54] 2025-04-14 16:30:35,600 | INFO     | . Timing measurements:
[2025-04-14 12:30:54] 2025-04-14 16:30:35,600 | INFO     | . get job = 0 s
[2025-04-14 12:30:54] 2025-04-14 16:30:35,600 | INFO     | . initial setup = 2 s
[2025-04-14 12:30:54] 2025-04-14 16:30:35,600 | INFO     | . payload setup = 7 s
[2025-04-14 12:30:54] 2025-04-14 16:30:35,600 | INFO     | . stage-in = 0 s
[2025-04-14 12:30:54] 2025-04-14 16:30:35,600 | INFO     | . payload execution = 5045 s
[2025-04-14 12:30:54] 2025-04-14 16:30:35,600 | INFO     | . stage-out = 0 s
[2025-04-14 12:30:54] 2025-04-14 16:30:35,600 | INFO     | . log creation = 0 s
[2025-04-14 12:30:54] 2025-04-14 16:30:35,600 | INFO     | ..............................
[2025-04-14 12:30:54] 2025-04-14 16:30:35,818 | INFO     | 
[2025-04-14 12:30:54] 2025-04-14 16:30:35,819 | INFO     | job summary report
[2025-04-14 12:30:54] 2025-04-14 16:30:35,819 | INFO     | --------------------------------------------------
[2025-04-14 12:30:54] 2025-04-14 16:30:35,819 | INFO     | PanDA job id: 6602126316
[2025-04-14 12:30:54] 2025-04-14 16:30:35,819 | INFO     | task id: 44075483
[2025-04-14 12:30:54] 2025-04-14 16:30:35,819 | INFO     | errors: (none)
[2025-04-14 12:30:54] 2025-04-14 16:30:35,820 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-14 12:30:54] 2025-04-14 16:30:35,820 | INFO     | pilot state: finished 
[2025-04-14 12:30:54] 2025-04-14 16:30:35,820 | INFO     | transexitcode: 0
[2025-04-14 12:30:54] 2025-04-14 16:30:35,820 | INFO     | exeerrorcode: 0
[2025-04-14 12:30:54] 2025-04-14 16:30:35,820 | INFO     | exeerrordiag: 
[2025-04-14 12:30:54] 2025-04-14 16:30:35,820 | INFO     | exitcode: 0
[2025-04-14 12:30:54] 2025-04-14 16:30:35,821 | INFO     | exitmsg: OK
[2025-04-14 12:30:54] 2025-04-14 16:30:35,821 | INFO     | cpuconsumptiontime: 46468 s
[2025-04-14 12:30:54] 2025-04-14 16:30:35,821 | INFO     | nevents: 400
[2025-04-14 12:30:54] 2025-04-14 16:30:35,821 | INFO     | neventsw: 0
[2025-04-14 12:30:54] 2025-04-14 16:30:35,821 | INFO     | pid: 14403
[2025-04-14 12:30:54] 2025-04-14 16:30:35,821 | INFO     | pgrp: 14403
[2025-04-14 12:30:54] 2025-04-14 16:30:35,821 | INFO     | corecount: 12
[2025-04-14 12:30:54] 2025-04-14 16:30:35,822 | INFO     | event service: False
[2025-04-14 12:30:54] 2025-04-14 16:30:35,822 | INFO     | sizes: {0: 2417311, 5: 2417517, 11: 2417573, 5056: 2443720, 5057: 2443719, 5058: 2452900, 5064: 2453014}
[2025-04-14 12:30:54] 2025-04-14 16:30:35,822 | INFO     | --------------------------------------------------
[2025-04-14 12:30:54] 2025-04-14 16:30:35,822 | INFO     | 
[2025-04-14 12:30:54] 2025-04-14 16:30:35,822 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-14 12:30:54] 2025-04-14 16:30:35,844 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-14 12:30:54] 2025-04-14 16:30:35,845 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-14 12:30:54] 2025-04-14 16:30:35,845 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-14 12:30:54] 2025-04-14 16:30:35,845 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-14 12:30:54] 2025-04-14 16:30:35,845 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-14 12:30:54] 2025-04-14 16:30:35,845 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-14 12:30:54] 2025-04-14 16:30:35,845 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-14 12:30:54] 2025-04-14 16:30:35,846 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-14 12:30:54] 2025-04-14 16:30:35,846 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-14 12:30:54] 2025-04-14 16:30:35,846 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-14 12:30:54] 2025-04-14 16:30:35,846 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-14 12:30:54] 2025-04-14 16:30:35,846 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-14 12:30:54] 2025-04-14 16:30:35,846 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-14 12:30:54] 2025-04-14 16:30:35,846 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-14 12:30:54] 2025-04-14 16:30:35,847 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-14 12:30:54] 2025-04-14 16:30:35,847 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-14 12:30:54] 2025-04-14 16:30:35,847 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-14 12:30:54] 2025-04-14 16:30:35,847 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-14 12:30:54] 2025-04-14 16:30:35,847 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-14 12:30:54] 2025-04-14 16:30:35,847 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-14 12:30:54] 2025-04-14 16:30:35,848 | INFO     | job 6602126316 has completed (purged errors)
[2025-04-14 12:30:54] 2025-04-14 16:30:35,848 | INFO     | overall cleanup function is called
[2025-04-14 12:30:54] 2025-04-14 16:30:36,851 | INFO     | --- collectZombieJob: --- 10, [14403]
[2025-04-14 12:30:54] 2025-04-14 16:30:36,851 | INFO     | zombie collector waiting for pid 14403
[2025-04-14 12:30:54] 2025-04-14 16:30:36,852 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-14 12:30:54] 2025-04-14 16:30:36,852 | INFO     | collected zombie processes
[2025-04-14 12:30:54] 2025-04-14 16:30:36,852 | INFO     | will attempt to kill all subprocesses of pid=14403
[2025-04-14 12:30:54] 2025-04-14 16:30:36,951 | INFO     | process IDs to be killed: [14403] (in reverse order)
[2025-04-14 12:30:54] 2025-04-14 16:30:37,005 | WARNING  | found no corresponding commands to process id(s)
[2025-04-14 12:30:54] 2025-04-14 16:30:37,005 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-14 12:30:54] 2025-04-14 16:30:37,008 | INFO     | did not find any defunct processes belonging to 14403
[2025-04-14 12:30:54] 2025-04-14 16:30:37,011 | INFO     | did not find any defunct processes belonging to 14403
[2025-04-14 12:30:54] 2025-04-14 16:30:37,011 | INFO     | ready for new job
[2025-04-14 12:30:54] 2025-04-14 16:30:37,011 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-14 12:30:54] 2025-04-14 16:30:37,012 | INFO     | **************************************
[2025-04-14 12:30:54] 2025-04-14 16:30:37,012 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-14 12:30:54] 2025-04-14 16:30:37,013 | INFO     | **************************************
[2025-04-14 12:30:54] 2025-04-14 16:30:37,013 | INFO     | 
[2025-04-14 12:30:54] 2025-04-14 16:30:37,013 | INFO     | architecture information:
[2025-04-14 12:30:54] 2025-04-14 16:30:37,014 | INFO     | executing command: cat /etc/os-release
[2025-04-14 12:30:54] 2025-04-14 16:30:37,030 | INFO     | cat /etc/os-release:
[2025-04-14 12:30:54] NAME="CentOS Linux"
[2025-04-14 12:30:54] VERSION="7 (Core)"
[2025-04-14 12:30:54] ID="centos"
[2025-04-14 12:30:54] ID_LIKE="rhel fedora"
[2025-04-14 12:30:54] VERSION_ID="7"
[2025-04-14 12:30:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-14 12:30:54] ANSI_COLOR="0;31"
[2025-04-14 12:30:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-14 12:30:54] HOME_URL="https://www.centos.org/"
[2025-04-14 12:30:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-14 12:30:54] 
[2025-04-14 12:30:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-14 12:30:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-14 12:30:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-14 12:30:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-14 12:30:54] 
[2025-04-14 12:30:54] 2025-04-14 16:30:37,030 | INFO     | **************************************
[2025-04-14 12:30:54] 2025-04-14 16:30:37,533 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-14 12:30:54] 2025-04-14 16:30:37,550 | INFO     | sufficient remaining disk space (29394731008 B)
[2025-04-14 12:30:54] 2025-04-14 16:30:37,550 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-14 12:30:54] 2025-04-14 16:30:37,551 | INFO     | current server update state: UPDATING_FINAL
[2025-04-14 12:30:54] 2025-04-14 16:30:37,551 | INFO     | update_server=False
[2025-04-14 12:30:54] 2025-04-14 16:30:37,551 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-14 12:30:54] 2025-04-14 16:30:37,551 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-14 12:30:54] 2025-04-14 16:30:37,551 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-14 12:30:54] 2025-04-14 16:30:37,552 | INFO     | aborting loop
[2025-04-14 12:30:54] 2025-04-14 16:30:37,687 | INFO     | found 0 job(s) in 20 queues
[2025-04-14 12:30:54] 2025-04-14 16:30:37,687 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-14 12:30:54] 2025-04-14 16:30:37,687 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-14 12:30:54] 2025-04-14 16:30:37,899 | INFO     | all payload control threads have been joined
[2025-04-14 12:30:54] 2025-04-14 16:30:38,006 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-14 12:30:54] 2025-04-14 16:30:38,313 | INFO     | all data control threads have been joined
[2025-04-14 12:30:54] 2025-04-14 16:30:38,556 | INFO     | [job] retrieve thread has finished
[2025-04-14 12:30:54] 2025-04-14 16:30:38,557 | INFO     | [job] queue monitor thread has finished
[2025-04-14 12:30:54] 2025-04-14 16:30:38,557 | INFO     | [job] job monitor thread has finished
[2025-04-14 12:30:54] 2025-04-14 16:30:38,657 | INFO     | [job] create_data_payload thread has finished
[2025-04-14 12:30:54] 2025-04-14 16:30:38,904 | INFO     | [payload] control thread has finished
[2025-04-14 12:30:54] 2025-04-14 16:30:38,986 | INFO     | [payload] validate_pre thread has finished
[2025-04-14 12:30:54] 2025-04-14 16:30:39,082 | INFO     | all job control threads have been joined
[2025-04-14 12:30:54] 2025-04-14 16:30:39,119 | INFO     | [payload] validate_post thread has finished
[2025-04-14 12:30:54] 2025-04-14 16:30:39,318 | INFO     | [data] control thread has finished
[2025-04-14 12:30:54] 2025-04-14 16:30:39,327 | INFO     | [data] copytool_in thread has finished
[2025-04-14 12:30:54] 2025-04-14 16:30:39,419 | INFO     | [payload] execute_payloads thread has finished
[2025-04-14 12:30:54] 2025-04-14 16:30:39,826 | INFO     | [payload] failed_post thread has finished
[2025-04-14 12:30:54] 2025-04-14 16:30:39,961 | INFO     | [job] validate thread has finished
[2025-04-14 12:30:54] 2025-04-14 16:30:40,012 | INFO     | [data] copytool_out thread has finished
[2025-04-14 12:30:54] 2025-04-14 16:30:40,088 | INFO     | [job] control thread has finished
[2025-04-14 12:30:54] 2025-04-14 16:30:40,843 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-14 12:30:54] 2025-04-14 16:30:44,849 | INFO     | [data] queue_monitor thread has finished
[2025-04-14 12:30:54] 2025-04-14 16:30:48,052 | INFO     | job.realtimelogging is not enabled
[2025-04-14 12:30:54] 2025-04-14 16:30:49,057 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-14 12:30:54] 2025-04-14 16:30:49,436 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139660233115456)>', '<ExcThread(monitor, started 139658906298112)>']
[2025-04-14 12:30:54] 2025-04-14 16:30:49,733 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-14 12:30:54] 2025-04-14 16:30:49,733 | INFO     | [monitor] control thread has ended
[2025-04-14 12:30:54] 2025-04-14 16:30:54,462 | INFO     | all workflow threads have been joined
[2025-04-14 12:30:54] 2025-04-14 16:30:54,462 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-14 12:30:54] 2025-04-14 16:30:54,462 | INFO     | traces error code: 0
[2025-04-14 12:30:54] 2025-04-14 16:30:54,463 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-14 12:30:54] 2025-04-14 16:30:54,551 [wrapper] ==== pilot stdout END ====
[2025-04-14 12:30:54] 2025-04-14 16:30:54,555 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-14 12:30:54] 2025-04-14 16:30:54,559 [wrapper] pilotpid: 7957
[2025-04-14 12:30:54] 2025-04-14 16:30:54,562 [wrapper] Pilot exit status: 0
[2025-04-14 12:30:54] 2025-04-14 16:30:54,578 [wrapper] pandaids: 6602126316
[2025-04-14 12:30:54] 2025-04-14 16:30:54,616 [wrapper] cleanup supervisor_pilot 23645 7958
[2025-04-14 12:30:54] 2025-04-14 16:30:54,619 [wrapper] Test setup, not cleaning
[2025-04-14 12:30:54] 2025-04-14 16:30:54,623 [wrapper] apfmon messages muted
[2025-04-14 12:30:54] 2025-04-14 16:30:54,627 [wrapper] ==== wrapper stdout END ====
[2025-04-14 12:30:54] 2025-04-14 16:30:54,630 [wrapper] ==== wrapper stderr END ====
[2025-04-14 12:30:54]  *** Error codes and diagnostics ***
[2025-04-14 12:30:54]     "exeErrorCode": 0,
[2025-04-14 12:30:54]     "exeErrorDiag": "",
[2025-04-14 12:30:54]     "pilotErrorCode": 0,
[2025-04-14 12:30:54]     "pilotErrorDiag": "",
[2025-04-14 12:30:54]  *** Listing of results directory ***
[2025-04-14 12:30:54] total 412640
[2025-04-14 12:30:54] -rw-r--r-- 1 boincer umatlas    495897 Apr 14 07:41 pilot3.tar.gz
[2025-04-14 12:30:54] -rwx------ 1 boincer umatlas     37140 Apr 14 07:45 runpilot2-wrapper.sh
[2025-04-14 12:30:54] -rw-r--r-- 1 boincer umatlas      5111 Apr 14 07:45 queuedata.json
[2025-04-14 12:30:54] -rw-r--r-- 1 boincer umatlas       100 Apr 14 11:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-14 12:30:54] -rwxr-xr-x 1 boincer umatlas      7986 Apr 14 11:05 run_atlas
[2025-04-14 12:30:54] -rw-r--r-- 1 boincer umatlas       105 Apr 14 11:05 job.xml
[2025-04-14 12:30:54] -rw-r--r-- 2 boincer umatlas 223972342 Apr 14 11:05 EVNT.44075481._000644.pool.root.1
[2025-04-14 12:30:54] -rw-r--r-- 2 boincer umatlas     17569 Apr 14 11:05 start_atlas.sh
[2025-04-14 12:30:54] drwxrwx--x 2 boincer umatlas      4096 Apr 14 11:05 shared
[2025-04-14 12:30:54] -rw-r--r-- 2 boincer umatlas    508887 Apr 14 11:05 input.tar.gz
[2025-04-14 12:30:54] -rw-r--r-- 1 boincer umatlas         0 Apr 14 11:05 boinc_lockfile
[2025-04-14 12:30:54] -rw-r--r-- 1 boincer umatlas      2576 Apr 14 11:05 pandaJob.out
[2025-04-14 12:30:54] -rw------- 1 boincer umatlas       424 Apr 14 11:05 setup.sh.local
[2025-04-14 12:30:54] -rw------- 1 boincer umatlas    986111 Apr 14 11:05 agis_schedconf.cvmfs.json
[2025-04-14 12:30:54] -rw------- 1 boincer umatlas   1603529 Apr 14 11:05 agis_ddmendpoints.agis.ALL.json
[2025-04-14 12:30:54] drwx------ 4 boincer umatlas      4096 Apr 14 11:05 pilot3
[2025-04-14 12:30:54] -rw-r--r-- 1 boincer umatlas      5867 Apr 14 12:28 init_data.xml
[2025-04-14 12:30:54] -rw-r--r-- 1 boincer umatlas       529 Apr 14 12:29 boinc_task_state.xml
[2025-04-14 12:30:54] -rw------- 1 boincer umatlas        95 Apr 14 12:29 pilot_heartbeat.json
[2025-04-14 12:30:54] -rw------- 1 boincer umatlas 193064765 Apr 14 12:29 HITS.44075483._016289.pool.root.1
[2025-04-14 12:30:54] -rw------- 1 boincer umatlas      1049 Apr 14 12:30 memory_monitor_summary.json
[2025-04-14 12:30:54] -rw------- 1 boincer umatlas    353417 Apr 14 12:30 log.44075483._016289.job.log.tgz.1
[2025-04-14 12:30:54] -rw-r--r-- 1 boincer umatlas      8192 Apr 14 12:30 boinc_mmap_file
[2025-04-14 12:30:54] -rw-r--r-- 1 boincer umatlas        27 Apr 14 12:30 wrapper_checkpoint.txt
[2025-04-14 12:30:54] -rw------- 1 boincer umatlas      7749 Apr 14 12:30 heartbeat.json
[2025-04-14 12:30:54] -rw------- 1 boincer umatlas      4425 Apr 14 12:30 pilotlog.txt
[2025-04-14 12:30:54] -rw------- 1 boincer umatlas    480428 Apr 14 12:30 log.44075483._016289.job.log.1
[2025-04-14 12:30:54] -rw------- 1 boincer umatlas       357 Apr 14 12:30 output.list
[2025-04-14 12:30:54] -rw-r--r-- 1 boincer umatlas       620 Apr 14 12:30 runtime_log
[2025-04-14 12:30:54] -rw------- 1 boincer umatlas    849920 Apr 14 12:30 result.tar.gz
[2025-04-14 12:30:54] -rw-r--r-- 1 boincer umatlas     11010 Apr 14 12:30 runtime_log.err
[2025-04-14 12:30:54] -rw------- 1 boincer umatlas       658 Apr 14 12:30 KSrNDm5QXO7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmXI0KDmS237Do.diag
[2025-04-14 12:30:54] -rw-r--r-- 1 boincer umatlas     21247 Apr 14 12:30 stderr.txt
[2025-04-14 12:30:54] HITS file was successfully produced:
[2025-04-14 12:30:54] -rw------- 1 boincer umatlas 193064765 Apr 14 12:29 shared/HITS.pool.root.1
[2025-04-14 12:30:54]  *** Contents of shared directory: ***
[2025-04-14 12:30:54] total 408620
[2025-04-14 12:30:54] -rw-r--r-- 2 boincer umatlas 223972342 Apr 14 11:05 ATLAS.root_0
[2025-04-14 12:30:54] -rw-r--r-- 2 boincer umatlas     17569 Apr 14 11:05 start_atlas.sh
[2025-04-14 12:30:54] -rw-r--r-- 2 boincer umatlas    508887 Apr 14 11:05 input.tar.gz
[2025-04-14 12:30:54] -rw------- 1 boincer umatlas 193064765 Apr 14 12:29 HITS.pool.root.1
[2025-04-14 12:30:54] -rw------- 1 boincer umatlas    849920 Apr 14 12:30 result.tar.gz
12:30:56 (3039): run_atlas exited; CPU time 46459.916442
12:30:56 (3039): called boinc_finish(0)

</stderr_txt>
]]>

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