Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-14 10:56:40 (180158): Detected: vboxwrapper 26206
2025-04-14 10:56:40 (180158): Detected: BOINC client v8.0.2
2025-04-14 10:56:40 (180158): Detected: VirtualBox VboxManage Interface (Version: 7.1.0)
2025-04-14 10:56:40 (180158): Successfully copied 'init_data.xml' to the shared directory.
2025-04-14 10:56:40 (180158): Create VM. (boinc_fed8ce6192b9d9cd, slot#1)
2025-04-14 10:56:41 (180158): Setting Memory Size for VM. (4300MB)
2025-04-14 10:56:41 (180158): Setting CPU Count for VM. (3)
2025-04-14 10:56:41 (180158): Setting Chipset Options for VM.
2025-04-14 10:56:41 (180158): Setting Graphics Controller Options for VM.
2025-04-14 10:56:41 (180158): Setting Boot Options for VM.
2025-04-14 10:56:41 (180158): Setting Network Configuration for NAT.
2025-04-14 10:56:41 (180158): Enabling VM Network Access.
2025-04-14 10:56:41 (180158): Disabling USB Support for VM.
2025-04-14 10:56:42 (180158): Disabling COM Port Support for VM.
2025-04-14 10:56:42 (180158): Disabling LPT Port Support for VM.
2025-04-14 10:56:42 (180158): Disabling Audio Support for VM.
2025-04-14 10:56:42 (180158): Disabling Clipboard Support for VM.
2025-04-14 10:56:42 (180158): Disabling Drag and Drop Support for VM.
2025-04-14 10:56:42 (180158): Adding storage controller(s) to VM.
2025-04-14 10:56:42 (180158): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-14 10:56:44 (180158): Adding VirtualBox Guest Additions to VM.
2025-04-14 10:56:44 (180158): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-14 10:56:44 (180158): forwarding host port 47447 to guest port 80
2025-04-14 10:56:45 (180158): Enabling remote desktop for VM.
2025-04-14 10:56:45 (180158): Required extension pack not installed, remote desktop not enabled.
2025-04-14 10:56:45 (180158): Enabling shared directory for VM.
2025-04-14 10:56:45 (180158): Starting VM using VBoxManage interface. (boinc_fed8ce6192b9d9cd, slot#1)
2025-04-14 10:56:46 (180158): Successfully started VM. (PID = '180747')
2025-04-14 10:56:46 (180158): Reporting VM Process ID to BOINC.
2025-04-14 10:56:46 (180158): Guest Log: BIOS: VirtualBox 7.1.0
2025-04-14 10:56:46 (180158): Guest Log: CPUID EDX: 0x178bfbff
2025-04-14 10:56:46 (180158): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-14 10:56:46 (180158): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-14 10:56:46 (180158): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-14 10:56:46 (180158): Detected: Web Application Enabled (http://localhost:47447)
2025-04-14 10:56:46 (180158): Preference change detected
2025-04-14 10:56:46 (180158): Setting CPU throttle for VM. (100%)
2025-04-14 10:56:47 (180158): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-14 10:56:48 (180158): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-14 10:56:48 (180158): Guest Log: BIOS: Booting from Hard Disk...
2025-04-14 10:56:51 (180158): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-14 10:56:51 (180158): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-14 10:56:51 (180158): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-14 10:57:10 (180158): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-14 10:57:10 (180158): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-14 10:57:31 (180158): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-14 10:57:31 (180158): Guest Log: 00:00:00.000275 main     Log opened 2025-04-14T17:57:29.571267000Z
2025-04-14 10:57:31 (180158): Guest Log: 00:00:00.000438 main     OS Product: Linux
2025-04-14 10:57:31 (180158): Guest Log: 00:00:00.000491 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-14 10:57:31 (180158): Guest Log: 00:00:00.000532 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-14 10:57:31 (180158): Guest Log: 00:00:00.000574 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-14 10:57:31 (180158): Guest Log: 00:00:00.000575 main     Process ID: 1291
2025-04-14 10:57:31 (180158): Guest Log: 00:00:00.000576 main     Package type: LINUX_64BITS_GENERIC
2025-04-14 10:57:31 (180158): Guest Log: 00:00:00.001851 main     5.2.32 r132073 started. Verbose level = 0
2025-04-14 10:57:32 (180158): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-14 10:57:32 (180158): Guest Log: [INFO] Mounting shared directory
2025-04-14 10:57:32 (180158): Guest Log: [INFO] Checking for init_data.xml
2025-04-14 10:57:44 (180158): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-14 10:57:44 (180158): Guest Log: [INFO] Detected branch: prod
2025-04-14 10:57:44 (180158): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-14 10:57:44 (180158): Guest Log: Copying input files
2025-04-14 10:57:45 (180158): Guest Log: Copied input files into RunAtlas.
2025-04-14 10:57:45 (180158): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-14 10:57:45 (180158): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-14 10:57:45 (180158): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-14 10:57:45 (180158): Guest Log: Further information can be found at the LHC@home message board.
2025-04-14 10:57:54 (180158): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-14 10:57:54 (180158): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-14 10:57:54 (180158): Guest Log: 2.6.3.0 1568 0 32044 144857 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-14 10:57:58 (180158): Guest Log: copied the webapp to /var/www
2025-04-14 10:57:58 (180158): Guest Log: ATHENA_PROC_NUMBER=3
2025-04-14 10:57:58 (180158): Guest Log: ATHENA_CORE_NUMBER=3
2025-04-14 10:57:59 (180158): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-14 10:57:59 (180158): Guest Log:  *** Starting ATLAS job. (PandaID=6602118552 taskID=44075483) ***
2025-04-14 11:14:42 (180158): VM state change detected. (old = 'running', new = 'paused')
2025-04-14 11:15:02 (180158): VM state change detected. (old = 'paused', new = 'running')
2025-04-14 12:36:10 (180158): Status Report: Elapsed Time: '6000.513857'
2025-04-14 12:36:10 (180158): Status Report: CPU Time: '14017.520000'
2025-04-14 12:45:21 (180158): VM state change detected. (old = 'running', new = 'paused')
2025-04-14 12:45:39 (180158): VM state change detected. (old = 'paused', new = 'running')
2025-04-14 14:15:34 (180158): Status Report: Elapsed Time: '12000.513857'
2025-04-14 14:15:35 (180158): Status Report: CPU Time: '31547.310000'
2025-04-14 14:26:54 (180158): VM state change detected. (old = 'running', new = 'paused')
2025-04-14 14:27:13 (180158): VM state change detected. (old = 'paused', new = 'running')
2025-04-14 14:29:24 (180158): VM state change detected. (old = 'running', new = 'paused')
2025-04-14 14:29:44 (180158): VM state change detected. (old = 'paused', new = 'running')
2025-04-14 15:22:03 (180158): Guest Log:  *** Job finished ***
2025-04-14 15:22:03 (180158): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-14 15:22:03 (180158): Guest Log: 2025-04-14 22:20:45,544 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-04-14 15:22:03 (180158): Guest Log: 2025-04-14 22:20:46,546 | INFO     | [job] queue monitor thread has finished
2025-04-14 15:22:03 (180158): Guest Log: 2025-04-14 22:20:46,574 | INFO     | [data] queue_monitor thread has finished
2025-04-14 15:22:03 (180158): Guest Log: 2025-04-14 22:20:48,655 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140082037770048)>', '<ExcThread(monitor, started 140081096554240)>']
2025-04-14 15:22:03 (180158): Guest Log: 2025-04-14 22:20:49,596 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-14 15:22:03 (180158): Guest Log: 2025-04-14 22:20:49,596 | INFO     | [monitor] control thread has ended
2025-04-14 15:22:03 (180158): Guest Log: 2025-04-14 22:20:53,661 | INFO     | all workflow threads have been joined
2025-04-14 15:22:03 (180158): Guest Log: 2025-04-14 22:20:53,662 | INFO     | end of generic workflow (traces error code: 0)
2025-04-14 15:22:03 (180158): Guest Log: 2025-04-14 22:20:53,662 | INFO     | traces error code: 0
2025-04-14 15:22:03 (180158): Guest Log: 2025-04-14 22:20:53,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-14 15:22:03 (180158): Guest Log: 2025-04-14 22:20:53,859 [wrapper] ==== pilot stdout END ====
2025-04-14 15:22:03 (180158): Guest Log: 2025-04-14 22:20:53,872 [wrapper] ==== wrapper stdout RESUME ====
2025-04-14 15:22:03 (180158): Guest Log: 2025-04-14 22:20:53,884 [wrapper] pilotpid: 5883
2025-04-14 15:22:03 (180158): Guest Log: 2025-04-14 22:20:53,896 [wrapper] Pilot exit status: 0
2025-04-14 15:22:03 (180158): Guest Log: 2025-04-14 22:20:54,002 [wrapper] pandaids: 6602118552
2025-04-14 15:22:03 (180158): Guest Log: 2025-04-14 22:20:54,059 [wrapper] cleanup supervisor_pilot 16789 5884
2025-04-14 15:22:03 (180158): Guest Log: 2025-04-14 22:20:54,067 [wrapper] Test setup, not cleaning
2025-04-14 15:22:03 (180158): Guest Log: 2025-04-14 22:20:54,076 [wrapper] apfmon messages muted
2025-04-14 15:22:03 (180158): Guest Log: 2025-04-14 22:20:54,084 [wrapper] ==== wrapper stdout END ====
2025-04-14 15:22:03 (180158): Guest Log: 2025-04-14 22:20:54,092 [wrapper] ==== wrapper stderr END ====
2025-04-14 15:22:03 (180158): Guest Log:  *** Error codes and diagnostics ***
2025-04-14 15:22:03 (180158): Guest Log:     "exeErrorCode": 0,
2025-04-14 15:22:03 (180158): Guest Log:     "exeErrorDiag": "",
2025-04-14 15:22:03 (180158): Guest Log:     "pilotErrorCode": 0,
2025-04-14 15:22:03 (180158): Guest Log:     "pilotErrorDiag": "",
2025-04-14 15:22:03 (180158): Guest Log:  *** Listing of results directory ***
2025-04-14 15:22:05 (180158): Guest Log: total 195164
2025-04-14 15:22:05 (180158): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 14 06:32 pilot3.tar.gz
2025-04-14 15:22:05 (180158): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 14 06:42 runpilot2-wrapper.sh
2025-04-14 15:22:05 (180158): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 14 06:42 queuedata.json
2025-04-14 15:22:05 (180158): Guest Log: -rw-r--r--. 1 atlas atlas    508888 Apr 14 17:57 input.tar.gz
2025-04-14 15:22:05 (180158): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Apr 14 17:57 start_atlas.sh
2025-04-14 15:22:05 (180158): Guest Log: -rw-r--r--. 1 atlas atlas      6473 Apr 14 17:57 init_data.xml
2025-04-14 15:22:05 (180158): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 14 17:57 EVNT.44075481._000546.pool.root.1 -> /data/./ATLAS.root_0
2025-04-14 15:22:05 (180158): Guest Log: -rw-r--r--. 1 atlas atlas      2578 Apr 14 17:57 pandaJob.out
2025-04-14 15:22:05 (180158): Guest Log: -rw-------. 1 atlas atlas       424 Apr 14 17:57 setup.sh.local
2025-04-14 15:22:05 (180158): Guest Log: -rw-------. 1 atlas atlas    986099 Apr 14 17:58 agis_schedconf.cvmfs.json
2025-04-14 15:22:05 (180158): Guest Log: drwx------. 4 atlas atlas      4096 Apr 14 17:59 pilot3
2025-04-14 15:22:05 (180158): Guest Log: -rw-------. 1 atlas atlas 192798397 Apr 14 22:19 HITS.44075483._013852.pool.root.1
2025-04-14 15:22:05 (180158): Guest Log: -rw-------. 1 atlas atlas        96 Apr 14 22:20 pilot_heartbeat.json
2025-04-14 15:22:05 (180158): Guest Log: -rw-------. 1 atlas atlas      1030 Apr 14 22:20 memory_monitor_summary.json
2025-04-14 15:22:05 (180158): Guest Log: -rw-------. 1 atlas atlas   1603529 Apr 14 22:20 agis_ddmendpoints.agis.ALL.json
2025-04-14 15:22:05 (180158): Guest Log: -rw-------. 1 atlas atlas    323939 Apr 14 22:20 log.44075483._013852.job.log.tgz.1
2025-04-14 15:22:05 (180158): Guest Log: -rw-------. 1 atlas atlas      7687 Apr 14 22:20 heartbeat.json
2025-04-14 15:22:05 (180158): Guest Log: -rw-------. 1 atlas atlas      4536 Apr 14 22:20 pilotlog.txt
2025-04-14 15:22:05 (180158): Guest Log: -rw-------. 1 atlas atlas   1317133 Apr 14 22:20 log.44075483._013852.job.log.1
2025-04-14 15:22:05 (180158): Guest Log: -rw-------. 1 atlas atlas       357 Apr 14 22:20 output.list
2025-04-14 15:22:05 (180158): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 14 22:20 runtime_log
2025-04-14 15:22:05 (180158): Guest Log: -rw-------. 1 atlas atlas   1658880 Apr 14 22:20 result.tar.gz
2025-04-14 15:22:05 (180158): Guest Log: -rw-r--r--. 1 atlas atlas     10929 Apr 14 22:20 runtime_log.err
2025-04-14 15:22:05 (180158): Guest Log: -rw-------. 1 atlas atlas       658 Apr 14 22:20 O2NKDmkhSO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmugVLDm4ndS3n.diag
2025-04-14 15:22:05 (180158): Guest Log: Looking for outputfile HITS.44075483._013852.pool.root.1
2025-04-14 15:22:05 (180158): Guest Log: HITS file was successfully produced
2025-04-14 15:22:05 (180158): Guest Log: -rw-------. 1 atlas atlas 192798397 Apr 14 22:19 /home/atlas/RunAtlas/HITS.44075483._013852.pool.root.1
2025-04-14 15:22:06 (180158): Guest Log: Successfully finished the ATLAS job!
2025-04-14 15:22:06 (180158): Guest Log: Copying the results back to the shared directory!
2025-04-14 15:22:06 (180158): Guest Log:  *** Contents of shared directory: ***
2025-04-14 15:22:06 (180158): Guest Log: total 222856
2025-04-14 15:22:06 (180158): Guest Log: -rw-r--r--. 1 root root 226000102 Apr 14 17:56 ATLAS.root_0
2025-04-14 15:22:06 (180158): Guest Log: -rw-r--r--. 1 root root      6473 Apr 14 17:56 init_data.xml
2025-04-14 15:22:06 (180158): Guest Log: -rw-r--r--. 1 root root    508888 Apr 14 17:56 input.tar.gz
2025-04-14 15:22:06 (180158): Guest Log: -rw-r--r--. 1 root root   1658880 Apr 14  2025 result.tar.gz
2025-04-14 15:22:06 (180158): Guest Log: -rw-r--r--. 1 root root     17569 Apr 14 17:56 start_atlas.sh
2025-04-14 15:22:06 (180158): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-14 15:22:06 (180158): VM Completion File Detected.
2025-04-14 15:22:06 (180158): Powering off VM.
2025-04-14 15:22:09 (180158): Successfully stopped VM.
2025-04-14 15:22:09 (180158): Deregistering VM. (boinc_fed8ce6192b9d9cd, slot#1)
2025-04-14 15:22:09 (180158): Removing network bandwidth throttle group from VM.
2025-04-14 15:22:09 (180158): Removing VM from VirtualBox.
15:22:15 (180158): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN