Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
15:51:29 (2484489): wrapper (7.7.26015): starting
15:51:29 (2484489): wrapper: running run_atlas (--nthreads 12)
[2025-04-14 15:51:29] Arguments: --nthreads 12
[2025-04-14 15:51:29] Threads: 12
[2025-04-14 15:51:29] Checking for CVMFS
[2025-04-14 15:51:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-14 15:51:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-14 15:51:29] Running cvmfs_config stat atlas.cern.ch
[2025-04-14 15:51:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-14 15:51:30] 2.12.6.0 4038419 4993 115640 144855 2 235 3053631 4096001 11854 130560 0 37257379 99.978 1309366 419 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-14 15:51:30] CVMFS is ok
[2025-04-14 15:51:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-14 15:51:30] Checking for apptainer binary...
[2025-04-14 15:51:30] apptainer is not installed, using version from CVMFS
[2025-04-14 15:51:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-14 15:51:30] epyc7v12
[2025-04-14 15:51:30] apptainer works
[2025-04-14 15:51:30] Set ATHENA_PROC_NUMBER=12
[2025-04-14 15:51:30] Set ATHENA_CORE_NUMBER=12
[2025-04-14 15:51:30] Starting ATLAS job with PandaID=6600997241
[2025-04-14 15:51:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-14 18:13:31]  *** The last 200 lines of the pilot log: ***
[2025-04-14 18:13:31] 2025-04-14 18:13:11,365 | INFO     | sum of deviations: 75713098879.92758
[2025-04-14 18:13:31] 2025-04-14 18:13:11,365 | INFO     | mean x: 1744650129.5072465
[2025-04-14 18:13:31] 2025-04-14 18:13:11,366 | INFO     | mean y: 2473823.572463768
[2025-04-14 18:13:31] 2025-04-14 18:13:11,366 | INFO     | -- intersect: -162099927753.14282
[2025-04-14 18:13:31] 2025-04-14 18:13:11,366 | INFO     | intersect: -162099927753.14282
[2025-04-14 18:13:31] 2025-04-14 18:13:11,366 | INFO     | chi2: 5.976520028578554
[2025-04-14 18:13:31] 2025-04-14 18:13:11,366 | INFO     | sum of square deviations: 729467036.9924784
[2025-04-14 18:13:31] 2025-04-14 18:13:11,371 | INFO     | sum of deviations: 82243120392.01498
[2025-04-14 18:13:31] 2025-04-14 18:13:11,371 | INFO     | mean x: 1744649977.0075188
[2025-04-14 18:13:31] 2025-04-14 18:13:11,372 | INFO     | mean y: 2484956.984962406
[2025-04-14 18:13:31] 2025-04-14 18:13:11,372 | INFO     | -- intersect: -196696544367.94812
[2025-04-14 18:13:31] 2025-04-14 18:13:11,372 | INFO     | intersect: -196696544367.94812
[2025-04-14 18:13:31] 2025-04-14 18:13:11,372 | INFO     | chi2: 5.152024463276482
[2025-04-14 18:13:31] 2025-04-14 18:13:11,372 | INFO     | current chi2=5.152024463276482 (change=13.795579390004459 %)
[2025-04-14 18:13:31] 2025-04-14 18:13:11,372 | INFO     | right removable region: 132
[2025-04-14 18:13:31] 2025-04-14 18:13:11,373 | INFO     | sum of square deviations: 729466426.9924784
[2025-04-14 18:13:31] 2025-04-14 18:13:11,373 | INFO     | sum of deviations: 37883768290.72934
[2025-04-14 18:13:31] 2025-04-14 18:13:11,373 | INFO     | mean x: 1744650282.0075188
[2025-04-14 18:13:31] 2025-04-14 18:13:11,373 | INFO     | mean y: 2541166.2706766916
[2025-04-14 18:13:31] 2025-04-14 18:13:11,374 | INFO     | -- intersect: -90603310708.81493
[2025-04-14 18:13:31] 2025-04-14 18:13:11,374 | INFO     | intersect: -90603310708.81493
[2025-04-14 18:13:31] 2025-04-14 18:13:11,374 | INFO     | chi2: 3.042089310598347
[2025-04-14 18:13:31] 2025-04-14 18:13:11,374 | INFO     | current chi2=3.042089310598347 (change=49.09932040632895 %)
[2025-04-14 18:13:31] 2025-04-14 18:13:11,374 | INFO     | sum of square deviations: 650246031.9921875
[2025-04-14 18:13:31] 2025-04-14 18:13:11,379 | INFO     | sum of deviations: 6802569642.3046875
[2025-04-14 18:13:31] 2025-04-14 18:13:11,379 | INFO     | mean x: 1744650434.5078125
[2025-04-14 18:13:31] 2025-04-14 18:13:11,379 | INFO     | mean y: 2601019.1953125
[2025-04-14 18:13:31] 2025-04-14 18:13:11,379 | INFO     | -- intersect: -18249115251.730152
[2025-04-14 18:13:31] 2025-04-14 18:13:11,379 | INFO     | intersect: -18249115251.730152
[2025-04-14 18:13:31] 2025-04-14 18:13:11,380 | INFO     | chi2: 1.2102374318124722
[2025-04-14 18:13:31] 2025-04-14 18:13:11,380 | INFO     | current chi2=1.2102374318124722 (change=60.216900023410844 %)
[2025-04-14 18:13:31] 2025-04-14 18:13:11,380 | INFO     | sum of square deviations: 576979236.9918702
[2025-04-14 18:13:31] 2025-04-14 18:13:11,381 | INFO     | sum of deviations: -4961397160.113821
[2025-04-14 18:13:31] 2025-04-14 18:13:11,381 | INFO     | mean x: 1744650587.00813
[2025-04-14 18:13:31] 2025-04-14 18:13:11,381 | INFO     | mean y: 2625193.113821138
[2025-04-14 18:13:31] 2025-04-14 18:13:11,381 | INFO     | -- intersect: 15004732570.324366
[2025-04-14 18:13:31] 2025-04-14 18:13:11,381 | INFO     | intersect: 15004732570.324366
[2025-04-14 18:13:31] 2025-04-14 18:13:11,381 | INFO     | chi2: 0.8616069820124126
[2025-04-14 18:13:31] 2025-04-14 18:13:11,381 | INFO     | current chi2=0.8616069820124126 (change=28.806781267535637 %)
[2025-04-14 18:13:31] 2025-04-14 18:13:11,382 | INFO     | sum of square deviations: 509433479.49152595
[2025-04-14 18:13:31] 2025-04-14 18:13:11,382 | INFO     | sum of deviations: -5623447936.186441
[2025-04-14 18:13:31] 2025-04-14 18:13:11,382 | INFO     | mean x: 1744650739.5084746
[2025-04-14 18:13:31] 2025-04-14 18:13:11,382 | INFO     | mean y: 2626682.186440678
[2025-04-14 18:13:31] 2025-04-14 18:13:11,387 | INFO     | -- intersect: 19261181518.91911
[2025-04-14 18:13:31] 2025-04-14 18:13:11,387 | INFO     | intersect: 19261181518.91911
[2025-04-14 18:13:31] 2025-04-14 18:13:11,387 | INFO     | chi2: 0.86155298573108
[2025-04-14 18:13:31] 2025-04-14 18:13:11,387 | INFO     | current chi2=0.86155298573108 (change=0.006266927086234612 %)
[2025-04-14 18:13:31] 2025-04-14 18:13:11,387 | INFO     | left removable region: 40
[2025-04-14 18:13:31] 2025-04-14 18:13:11,387 | INFO     | sum of square deviations: 241429643.0
[2025-04-14 18:13:31] 2025-04-14 18:13:11,388 | INFO     | sum of deviations: 1007538738.5
[2025-04-14 18:13:31] 2025-04-14 18:13:11,388 | INFO     | mean x: 1744651166.5
[2025-04-14 18:13:31] 2025-04-14 18:13:11,388 | INFO     | mean y: 2651497.467391304
[2025-04-14 18:13:31] 2025-04-14 18:13:11,388 | INFO     | -- intersect: -7278159647.243465
[2025-04-14 18:13:31] 2025-04-14 18:13:11,388 | INFO     | intersect: -7278159647.243465
[2025-04-14 18:13:31] 2025-04-14 18:13:11,388 | INFO     | chi2: 6.0498581209363314e-05
[2025-04-14 18:13:31] 2025-04-14 18:13:11,388 | INFO     | -- intersect: -7278159647.243465
[2025-04-14 18:13:31] 2025-04-14 18:13:11,389 | INFO     | current memory leak: 4.17 B/s (using 92 data points, chi2=0.00)
[2025-04-14 18:13:31] 2025-04-14 18:13:11,389 | INFO     | ..............................
[2025-04-14 18:13:31] 2025-04-14 18:13:11,389 | INFO     | . Timing measurements:
[2025-04-14 18:13:31] 2025-04-14 18:13:11,389 | INFO     | . get job = 0 s
[2025-04-14 18:13:31] 2025-04-14 18:13:11,389 | INFO     | . initial setup = 2 s
[2025-04-14 18:13:31] 2025-04-14 18:13:11,389 | INFO     | . payload setup = 9 s
[2025-04-14 18:13:31] 2025-04-14 18:13:11,389 | INFO     | . stage-in = 0 s
[2025-04-14 18:13:31] 2025-04-14 18:13:11,390 | INFO     | . payload execution = 8366 s
[2025-04-14 18:13:31] 2025-04-14 18:13:11,390 | INFO     | . stage-out = 2 s
[2025-04-14 18:13:31] 2025-04-14 18:13:11,390 | INFO     | . log creation = 0 s
[2025-04-14 18:13:31] 2025-04-14 18:13:11,390 | INFO     | ..............................
[2025-04-14 18:13:31] 2025-04-14 18:13:11,647 | INFO     | 
[2025-04-14 18:13:31] 2025-04-14 18:13:11,647 | INFO     | job summary report
[2025-04-14 18:13:31] 2025-04-14 18:13:11,647 | INFO     | --------------------------------------------------
[2025-04-14 18:13:31] 2025-04-14 18:13:11,647 | INFO     | PanDA job id: 6600997241
[2025-04-14 18:13:31] 2025-04-14 18:13:11,647 | INFO     | task id: 44075483
[2025-04-14 18:13:31] 2025-04-14 18:13:11,647 | INFO     | errors: (none)
[2025-04-14 18:13:31] 2025-04-14 18:13:11,647 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-14 18:13:31] 2025-04-14 18:13:11,647 | INFO     | pilot state: finished 
[2025-04-14 18:13:31] 2025-04-14 18:13:11,647 | INFO     | transexitcode: 0
[2025-04-14 18:13:31] 2025-04-14 18:13:11,648 | INFO     | exeerrorcode: 0
[2025-04-14 18:13:31] 2025-04-14 18:13:11,648 | INFO     | exeerrordiag: 
[2025-04-14 18:13:31] 2025-04-14 18:13:11,648 | INFO     | exitcode: 0
[2025-04-14 18:13:31] 2025-04-14 18:13:11,648 | INFO     | exitmsg: OK
[2025-04-14 18:13:31] 2025-04-14 18:13:11,648 | INFO     | cpuconsumptiontime: 45527 s
[2025-04-14 18:13:31] 2025-04-14 18:13:11,648 | INFO     | nevents: 400
[2025-04-14 18:13:31] 2025-04-14 18:13:11,648 | INFO     | neventsw: 0
[2025-04-14 18:13:31] 2025-04-14 18:13:11,648 | INFO     | pid: 2542636
[2025-04-14 18:13:31] 2025-04-14 18:13:11,648 | INFO     | pgrp: 2542636
[2025-04-14 18:13:31] 2025-04-14 18:13:11,648 | INFO     | corecount: 12
[2025-04-14 18:13:31] 2025-04-14 18:13:11,648 | INFO     | event service: False
[2025-04-14 18:13:31] 2025-04-14 18:13:11,648 | INFO     | sizes: {0: 2417383, 8: 2417589, 11: 2417617, 8380: 2445271, 8384: 2454314, 8458: 2454428}
[2025-04-14 18:13:31] 2025-04-14 18:13:11,649 | INFO     | --------------------------------------------------
[2025-04-14 18:13:31] 2025-04-14 18:13:11,649 | INFO     | 
[2025-04-14 18:13:31] 2025-04-14 18:13:11,649 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/7
[2025-04-14 18:13:31] 2025-04-14 18:13:12,081 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-14 18:13:31] 2025-04-14 18:13:12,081 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-14 18:13:31] 2025-04-14 18:13:12,081 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-14 18:13:31] 2025-04-14 18:13:12,081 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-14 18:13:31] 2025-04-14 18:13:12,081 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-14 18:13:31] 2025-04-14 18:13:12,081 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-14 18:13:31] 2025-04-14 18:13:12,082 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-14 18:13:31] 2025-04-14 18:13:12,082 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-14 18:13:31] 2025-04-14 18:13:12,082 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-14 18:13:31] 2025-04-14 18:13:12,082 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-14 18:13:31] 2025-04-14 18:13:12,082 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-14 18:13:31] 2025-04-14 18:13:12,082 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-14 18:13:31] 2025-04-14 18:13:12,082 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-14 18:13:31] 2025-04-14 18:13:12,082 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-14 18:13:31] 2025-04-14 18:13:12,082 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-14 18:13:31] 2025-04-14 18:13:12,083 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-14 18:13:31] 2025-04-14 18:13:12,083 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-14 18:13:31] 2025-04-14 18:13:12,083 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-14 18:13:31] 2025-04-14 18:13:12,083 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-14 18:13:31] 2025-04-14 18:13:12,083 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-14 18:13:31] 2025-04-14 18:13:12,083 | INFO     | job 6600997241 has completed (purged errors)
[2025-04-14 18:13:31] 2025-04-14 18:13:12,083 | INFO     | overall cleanup function is called
[2025-04-14 18:13:31] 2025-04-14 18:13:13,095 | INFO     | --- collectZombieJob: --- 10, [2542636]
[2025-04-14 18:13:31] 2025-04-14 18:13:13,095 | INFO     | zombie collector waiting for pid 2542636
[2025-04-14 18:13:31] 2025-04-14 18:13:13,095 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-14 18:13:31] 2025-04-14 18:13:13,095 | INFO     | collected zombie processes
[2025-04-14 18:13:31] 2025-04-14 18:13:13,095 | INFO     | will attempt to kill all subprocesses of pid=2542636
[2025-04-14 18:13:31] 2025-04-14 18:13:14,329 | INFO     | process IDs to be killed: [2542636] (in reverse order)
[2025-04-14 18:13:31] 2025-04-14 18:13:19,055 | WARNING  | found no corresponding commands to process id(s)
[2025-04-14 18:13:31] 2025-04-14 18:13:19,067 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-14 18:13:31] 2025-04-14 18:13:19,100 | INFO     | did not find any defunct processes belonging to 2542636
[2025-04-14 18:13:31] 2025-04-14 18:13:19,126 | INFO     | did not find any defunct processes belonging to 2542636
[2025-04-14 18:13:31] 2025-04-14 18:13:19,126 | INFO     | ready for new job
[2025-04-14 18:13:31] 2025-04-14 18:13:19,127 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-14 18:13:31] 2025-04-14 18:13:19,128 | INFO     | **************************************
[2025-04-14 18:13:31] 2025-04-14 18:13:19,129 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-14 18:13:31] 2025-04-14 18:13:19,129 | INFO     | **************************************
[2025-04-14 18:13:31] 2025-04-14 18:13:19,129 | INFO     | 
[2025-04-14 18:13:31] 2025-04-14 18:13:19,169 | INFO     | architecture information:
[2025-04-14 18:13:31] 2025-04-14 18:13:19,183 | INFO     | executing command: cat /etc/os-release
[2025-04-14 18:13:31] 2025-04-14 18:13:19,304 | INFO     | cat /etc/os-release:
[2025-04-14 18:13:31] NAME="CentOS Linux"
[2025-04-14 18:13:31] VERSION="7 (Core)"
[2025-04-14 18:13:31] ID="centos"
[2025-04-14 18:13:31] ID_LIKE="rhel fedora"
[2025-04-14 18:13:31] VERSION_ID="7"
[2025-04-14 18:13:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-14 18:13:31] ANSI_COLOR="0;31"
[2025-04-14 18:13:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-14 18:13:31] HOME_URL="https://www.centos.org/"
[2025-04-14 18:13:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-14 18:13:31] 
[2025-04-14 18:13:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-14 18:13:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-14 18:13:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-14 18:13:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-14 18:13:31] 
[2025-04-14 18:13:31] 2025-04-14 18:13:19,304 | INFO     | **************************************
[2025-04-14 18:13:31] 2025-04-14 18:13:19,811 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/7
[2025-04-14 18:13:31] 2025-04-14 18:13:20,011 | INFO     | sufficient remaining disk space (316262055936 B)
[2025-04-14 18:13:31] 2025-04-14 18:13:20,012 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-14 18:13:31] 2025-04-14 18:13:20,012 | INFO     | current server update state: UPDATING_FINAL
[2025-04-14 18:13:31] 2025-04-14 18:13:20,012 | INFO     | update_server=False
[2025-04-14 18:13:31] 2025-04-14 18:13:20,012 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-14 18:13:31] 2025-04-14 18:13:20,015 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-14 18:13:31] 2025-04-14 18:13:20,015 | INFO     | found 0 job(s) in 20 queues
[2025-04-14 18:13:31] 2025-04-14 18:13:20,015 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-14 18:13:31] 2025-04-14 18:13:20,015 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-14 18:13:31] 2025-04-14 18:13:20,083 | INFO     | all data control threads have been joined
[2025-04-14 18:13:31] 2025-04-14 18:13:20,439 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-14 18:13:31] 2025-04-14 18:13:20,439 | INFO     | aborting loop
[2025-04-14 18:13:31] 2025-04-14 18:13:20,475 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-14 18:13:31] 2025-04-14 18:13:20,691 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-14 18:13:31] 2025-04-14 18:13:20,695 | INFO     | all job control threads have been joined
[2025-04-14 18:13:31] 2025-04-14 18:13:20,739 | INFO     | all payload control threads have been joined
[2025-04-14 18:13:31] 2025-04-14 18:13:20,827 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-14 18:13:31] 2025-04-14 18:13:21,015 | INFO     | [job] retrieve thread has finished
[2025-04-14 18:13:31] 2025-04-14 18:13:21,087 | INFO     | [data] control thread has finished
[2025-04-14 18:13:31] 2025-04-14 18:13:21,223 | INFO     | [job] validate thread has finished
[2025-04-14 18:13:31] 2025-04-14 18:13:21,335 | INFO     | [data] copytool_in thread has finished
[2025-04-14 18:13:31] 2025-04-14 18:13:21,443 | INFO     | [job] job monitor thread has finished
[2025-04-14 18:13:31] 2025-04-14 18:13:21,467 | INFO     | [payload] validate_post thread has finished
[2025-04-14 18:13:31] 2025-04-14 18:13:21,627 | INFO     | [payload] validate_pre thread has finished
[2025-04-14 18:13:31] 2025-04-14 18:13:21,647 | INFO     | [payload] execute_payloads thread has finished
[2025-04-14 18:13:31] 2025-04-14 18:13:21,699 | INFO     | [job] control thread has finished
[2025-04-14 18:13:31] 2025-04-14 18:13:21,703 | INFO     | [job] queue monitor thread has finished
[2025-04-14 18:13:31] 2025-04-14 18:13:21,747 | INFO     | [payload] control thread has finished
[2025-04-14 18:13:31] 2025-04-14 18:13:22,027 | INFO     | [job] create_data_payload thread has finished
[2025-04-14 18:13:31] 2025-04-14 18:13:22,103 | INFO     | [payload] failed_post thread has finished
[2025-04-14 18:13:31] 2025-04-14 18:13:22,383 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-14 18:13:31] 2025-04-14 18:13:22,835 | INFO     | [data] copytool_out thread has finished
[2025-04-14 18:13:31] 2025-04-14 18:13:24,491 | INFO     | [data] queue_monitor thread has finished
[2025-04-14 18:13:31] 2025-04-14 18:13:25,707 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140183171471168)>', '<ExcThread(monitor, started 140182716126976)>']
[2025-04-14 18:13:31] 2025-04-14 18:13:26,039 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-14 18:13:31] 2025-04-14 18:13:26,039 | INFO     | [monitor] control thread has ended
[2025-04-14 18:13:31] 2025-04-14 18:13:30,731 | INFO     | all workflow threads have been joined
[2025-04-14 18:13:31] 2025-04-14 18:13:30,731 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-14 18:13:31] 2025-04-14 18:13:30,731 | INFO     | traces error code: 0
[2025-04-14 18:13:31] 2025-04-14 18:13:30,732 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-14 18:13:31] 2025-04-14 18:13:30,990 [wrapper] ==== pilot stdout END ====
[2025-04-14 18:13:31] 2025-04-14 18:13:31,031 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-14 18:13:31] 2025-04-14 18:13:31,060 [wrapper] pilotpid: 2517220
[2025-04-14 18:13:31] 2025-04-14 18:13:31,078 [wrapper] Pilot exit status: 0
[2025-04-14 18:13:31] 2025-04-14 18:13:31,126 [wrapper] pandaids: 6600997241
[2025-04-14 18:13:31] 2025-04-14 18:13:31,389 [wrapper] cleanup supervisor_pilot 2960600 2517221
[2025-04-14 18:13:31] 2025-04-14 18:13:31,393 [wrapper] Test setup, not cleaning
[2025-04-14 18:13:31] 2025-04-14 18:13:31,429 [wrapper] apfmon messages muted
[2025-04-14 18:13:31] 2025-04-14 18:13:31,468 [wrapper] ==== wrapper stdout END ====
[2025-04-14 18:13:31] 2025-04-14 18:13:31,479 [wrapper] ==== wrapper stderr END ====
[2025-04-14 18:13:31]  *** Error codes and diagnostics ***
[2025-04-14 18:13:31]     "exeErrorCode": 0,
[2025-04-14 18:13:31]     "exeErrorDiag": "",
[2025-04-14 18:13:31]     "pilotErrorCode": 0,
[2025-04-14 18:13:31]     "pilotErrorDiag": "",
[2025-04-14 18:13:31]  *** Listing of results directory ***
[2025-04-14 18:13:31] total 412668
[2025-04-14 18:13:31] -rw-r--r-- 1 boinc boinc    495897 Apr 13 10:58 pilot3.tar.gz
[2025-04-14 18:13:31] -rw-r--r-- 1 boinc boinc      5111 Apr 13 11:04 queuedata.json
[2025-04-14 18:13:31] -rwx------ 1 boinc boinc     37140 Apr 13 11:08 runpilot2-wrapper.sh
[2025-04-14 18:13:31] -rw-rw-r-- 1 boinc boinc       100 Apr 14 15:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-14 18:13:31] -rwxr-xr-x 1 boinc boinc      7986 Apr 14 15:51 run_atlas
[2025-04-14 18:13:31] -rw-rw-r-- 1 boinc boinc       105 Apr 14 15:51 job.xml
[2025-04-14 18:13:31] -rw-r--r-- 2 boinc boinc     17569 Apr 14 15:51 start_atlas.sh
[2025-04-14 18:13:31] drwxrwx--x 2 boinc boinc      4096 Apr 14 15:51 shared
[2025-04-14 18:13:31] -rw-r--r-- 2 boinc boinc    508890 Apr 14 15:51 input.tar.gz
[2025-04-14 18:13:31] -rw-rw-r-- 1 boinc boinc      6941 Apr 14 15:51 init_data.xml
[2025-04-14 18:13:31] -rw-r--r-- 2 boinc boinc 223998113 Apr 14 15:51 EVNT.44075481._000156.pool.root.1
[2025-04-14 18:13:31] -rw-rw-r-- 1 boinc boinc         0 Apr 14 15:51 boinc_lockfile
[2025-04-14 18:13:31] -rw-rw-r-- 1 boinc boinc      2576 Apr 14 15:51 pandaJob.out
[2025-04-14 18:13:31] -rw------- 1 boinc boinc       424 Apr 14 15:51 setup.sh.local
[2025-04-14 18:13:31] -rw------- 1 boinc boinc    986099 Apr 14 15:51 agis_schedconf.cvmfs.json
[2025-04-14 18:13:31] -rw------- 1 boinc boinc   1603529 Apr 14 15:51 agis_ddmendpoints.agis.ALL.json
[2025-04-14 18:13:31] drwx------ 4 boinc boinc      4096 Apr 14 15:51 pilot3
[2025-04-14 18:13:31] -rw------- 1 boinc boinc 192453590 Apr 14 18:10 HITS.44075483._004089.pool.root.1
[2025-04-14 18:13:31] -rw-rw-r-- 1 boinc boinc       530 Apr 14 18:10 boinc_task_state.xml
[2025-04-14 18:13:31] -rw------- 1 boinc boinc      1037 Apr 14 18:11 memory_monitor_summary.json
[2025-04-14 18:13:31] -rw------- 1 boinc boinc    385919 Apr 14 18:11 log.44075483._004089.job.log.tgz.1
[2025-04-14 18:13:31] -rw------- 1 boinc boinc        95 Apr 14 18:12 pilot_heartbeat.json
[2025-04-14 18:13:31] -rw------- 1 boinc boinc      7644 Apr 14 18:13 heartbeat.json
[2025-04-14 18:13:31] -rw-rw-r-- 1 boinc boinc        27 Apr 14 18:13 wrapper_checkpoint.txt
[2025-04-14 18:13:31] -rw-rw-r-- 1 boinc boinc      8192 Apr 14 18:13 boinc_mmap_file
[2025-04-14 18:13:31] -rw------- 1 boinc boinc      4500 Apr 14 18:13 pilotlog.txt
[2025-04-14 18:13:31] -rw------- 1 boinc boinc    748524 Apr 14 18:13 log.44075483._004089.job.log.1
[2025-04-14 18:13:31] -rw------- 1 boinc boinc       357 Apr 14 18:13 output.list
[2025-04-14 18:13:31] -rw-rw-r-- 1 boinc boinc       620 Apr 14 18:13 runtime_log
[2025-04-14 18:13:31] -rw------- 1 boinc boinc   1157120 Apr 14 18:13 result.tar.gz
[2025-04-14 18:13:31] -rw-rw-r-- 1 boinc boinc     11409 Apr 14 18:13 runtime_log.err
[2025-04-14 18:13:31] -rw------- 1 boinc boinc       652 Apr 14 18:13 frIODmTNAO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmhkTLDmvz2FDn.diag
[2025-04-14 18:13:31] -rw-rw-r-- 1 boinc boinc     20568 Apr 14 18:13 stderr.txt
[2025-04-14 18:13:32] HITS file was successfully produced:
[2025-04-14 18:13:32] -rw------- 1 boinc boinc 192453590 Apr 14 18:10 shared/HITS.pool.root.1
[2025-04-14 18:13:32]  *** Contents of shared directory: ***
[2025-04-14 18:13:32] total 408356
[2025-04-14 18:13:32] -rw-r--r-- 2 boinc boinc     17569 Apr 14 15:51 start_atlas.sh
[2025-04-14 18:13:32] -rw-r--r-- 2 boinc boinc    508890 Apr 14 15:51 input.tar.gz
[2025-04-14 18:13:32] -rw-r--r-- 2 boinc boinc 223998113 Apr 14 15:51 ATLAS.root_0
[2025-04-14 18:13:32] -rw------- 1 boinc boinc 192453590 Apr 14 18:10 HITS.pool.root.1
[2025-04-14 18:13:32] -rw------- 1 boinc boinc   1157120 Apr 14 18:13 result.tar.gz
18:13:33 (2484489): run_atlas exited; CPU time 46005.164086
18:13:33 (2484489): called boinc_finish(0)

</stderr_txt>
]]>

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