Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:23:59 (31427): wrapper (7.7.26015): starting
08:23:59 (31427): wrapper: running run_atlas (--nthreads 12)
[2025-04-14 08:23:59] Arguments: --nthreads 12
[2025-04-14 08:23:59] Threads: 12
[2025-04-14 08:23:59] Checking for CVMFS
[2025-04-14 08:23:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-14 08:23:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-14 08:23:59] Running cvmfs_config stat atlas.cern.ch
[2025-04-14 08:24:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-14 08:24:00] 2.11.2.0 14409 370994 167716 144849 2 55 13777232 20275200 1 130560 0 17658958 99.989 5466066 54170 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-14 08:24:00] CVMFS is ok
[2025-04-14 08:24:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-14 08:24:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-14 08:24:00] Further information can be found at the LHC@home message board.
[2025-04-14 08:24:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-14 08:24:00] Checking for apptainer binary...
[2025-04-14 08:24:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-14 08:24:00] Running /usr/bin/apptainer --version
[2025-04-14 08:24:00] apptainer version 1.3.2-1.el7
[2025-04-14 08:24:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-14 08:24:01] c-205-32.aglt2.org
[2025-04-14 08:24:01] apptainer works
[2025-04-14 08:24:01] Set ATHENA_PROC_NUMBER=12
[2025-04-14 08:24:01] Set ATHENA_CORE_NUMBER=12
[2025-04-14 08:24:01] Starting ATLAS job with PandaID=6602116022
[2025-04-14 08:24:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-14 09:49:38]  *** The last 200 lines of the pilot log: ***
[2025-04-14 09:49:38]  lfn=log.44075483._012740.job.log.tgz.1
[2025-04-14 09:49:38]  mtime=0
[2025-04-14 09:49:38]  protocol_id=None
[2025-04-14 09:49:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-14 09:49:38]  replicas=None
[2025-04-14 09:49:38]  scope=mc23_13p6TeV
[2025-04-14 09:49:38]  status=None
[2025-04-14 09:49:38]  status_code=0
[2025-04-14 09:49:38]  storage_token=
[2025-04-14 09:49:38]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6602116022/log.44075483._012740.job.log.tgz.1
[2025-04-14 09:49:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/41/log.44075483._012740.job.log.tgz.1
[2025-04-14 09:49:38]  workdir=None
[2025-04-14 09:49:38] ]
[2025-04-14 09:49:38] 2025-04-14 13:49:12,181 | INFO     | transferring file log.44075483._012740.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6602116022/log.44075483._012740.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-14 09:49:38] 2025-04-14 13:49:12,181 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6602116022/log.44075483._012740.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._012740.job
[2025-04-14 09:49:38] 2025-04-14 13:49:12,203 | INFO     | adding to output.list: log.44075483._012740.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/41/log.44075483._012740.job.log.tg
[2025-04-14 09:49:38] 2025-04-14 13:49:12,204 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-14 09:49:38] 2025-04-14 13:49:12,204 | INFO     | summary of transferred files:
[2025-04-14 09:49:38] 2025-04-14 13:49:12,205 | INFO     |  -- lfn=log.44075483._012740.job.log.tgz.1, status_code=0, status=transferred
[2025-04-14 09:49:38] 2025-04-14 13:49:12,205 | INFO     | stage-out finished correctly
[2025-04-14 09:49:38] 2025-04-14 13:49:12,290 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-14 09:49:38] 2025-04-14 13:49:13,642 | INFO     | job 6602116022 has state=finished
[2025-04-14 09:49:38] 2025-04-14 13:49:13,642 | INFO     | preparing for final server update for job 6602116022 in state='finished'
[2025-04-14 09:49:38] 2025-04-14 13:49:13,643 | INFO     | this job has now completed (state=finished)
[2025-04-14 09:49:38] 2025-04-14 13:49:13,643 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-14 09:49:38] 2025-04-14 13:49:13,643 | INFO     | log transfer has been attempted: DONE
[2025-04-14 09:49:38] 2025-04-14 13:49:13,643 | INFO     | job 6602116022 has finished - writing final server update
[2025-04-14 09:49:38] 2025-04-14 13:49:13,644 | INFO     | total number of processed events: 400 (read)
[2025-04-14 09:49:38] 2025-04-14 13:49:13,645 | INFO     | executing command: lscpu
[2025-04-14 09:49:38] 2025-04-14 13:49:13,672 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-14 09:49:38] 2025-04-14 13:49:15,234 | WARNING  | process 9212 can no longer be monitored (due to stat problems) - aborting
[2025-04-14 09:49:38] 2025-04-14 13:49:15,234 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6602116022/memory_monitor_summary.json (trf name=prmon)
[2025-04-14 09:49:38] 2025-04-14 13:49:15,326 | INFO     | number of running child processes to parent process 9212: 1
[2025-04-14 09:49:38] 2025-04-14 13:49:15,326 | INFO     | maximum number of monitored processes: 6
[2025-04-14 09:49:38] 2025-04-14 13:49:15,586 | INFO     | PID=2779 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-04-14 09:49:38] 2025-04-14 13:49:17,830 | INFO     | monitor loop #380: job 0:6602116022 is in state 'finished'
[2025-04-14 09:49:38] 2025-04-14 13:49:17,830 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-14 09:49:38] 2025-04-14 13:49:18,141 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-14 09:49:38] 2025-04-14 13:49:18,142 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6602116022/memory_monitor_summary.json (trf name=prmon)
[2025-04-14 09:49:38] 2025-04-14 13:49:18,142 | INFO     | extracted standard info from prmon json
[2025-04-14 09:49:38] 2025-04-14 13:49:18,143 | INFO     | extracted standard memory fields from prmon json
[2025-04-14 09:49:38] 2025-04-14 13:49:18,143 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-14 09:49:38] 2025-04-14 13:49:18,143 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-14 09:49:38] 2025-04-14 13:49:18,143 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-14 09:49:38] 2025-04-14 13:49:18,146 | INFO     | fitting pss+swap vs Time
[2025-04-14 09:49:38] 2025-04-14 13:49:18,146 | INFO     | sum of square deviations: 141539398.0
[2025-04-14 09:49:38] 2025-04-14 13:49:18,147 | INFO     | sum of deviations: 18969618655.0
[2025-04-14 09:49:38] 2025-04-14 13:49:18,147 | INFO     | mean x: 1744636106.0
[2025-04-14 09:49:38] 2025-04-14 13:49:18,147 | INFO     | mean y: 2667187.272727273
[2025-04-14 09:49:38] 2025-04-14 13:49:18,147 | INFO     | -- intersect: -233819732018.94797
[2025-04-14 09:49:38] 2025-04-14 13:49:18,147 | INFO     | intersect: -233819732018.94797
[2025-04-14 09:49:38] 2025-04-14 13:49:18,148 | INFO     | chi2: 2.4291903044305156
[2025-04-14 09:49:38] 2025-04-14 13:49:18,148 | INFO     | -- intersect: -233819732018.94797
[2025-04-14 09:49:38] 2025-04-14 13:49:18,148 | INFO     | current memory leak: 134.02 B/s (using 77 data points, chi2=2.43)
[2025-04-14 09:49:38] 2025-04-14 13:49:18,148 | INFO     | ..............................
[2025-04-14 09:49:38] 2025-04-14 13:49:18,149 | INFO     | . Timing measurements:
[2025-04-14 09:49:38] 2025-04-14 13:49:18,149 | INFO     | . get job = 0 s
[2025-04-14 09:49:38] 2025-04-14 13:49:18,149 | INFO     | . initial setup = 2 s
[2025-04-14 09:49:38] 2025-04-14 13:49:18,149 | INFO     | . payload setup = 7 s
[2025-04-14 09:49:38] 2025-04-14 13:49:18,149 | INFO     | . stage-in = 0 s
[2025-04-14 09:49:38] 2025-04-14 13:49:18,149 | INFO     | . payload execution = 5070 s
[2025-04-14 09:49:38] 2025-04-14 13:49:18,149 | INFO     | . stage-out = 0 s
[2025-04-14 09:49:38] 2025-04-14 13:49:18,150 | INFO     | . log creation = 0 s
[2025-04-14 09:49:38] 2025-04-14 13:49:18,150 | INFO     | ..............................
[2025-04-14 09:49:38] 2025-04-14 13:49:18,500 | INFO     | 
[2025-04-14 09:49:38] 2025-04-14 13:49:18,500 | INFO     | job summary report
[2025-04-14 09:49:38] 2025-04-14 13:49:18,500 | INFO     | --------------------------------------------------
[2025-04-14 09:49:38] 2025-04-14 13:49:18,500 | INFO     | PanDA job id: 6602116022
[2025-04-14 09:49:38] 2025-04-14 13:49:18,500 | INFO     | task id: 44075483
[2025-04-14 09:49:38] 2025-04-14 13:49:18,501 | INFO     | errors: (none)
[2025-04-14 09:49:38] 2025-04-14 13:49:18,501 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-14 09:49:38] 2025-04-14 13:49:18,501 | INFO     | pilot state: finished 
[2025-04-14 09:49:38] 2025-04-14 13:49:18,501 | INFO     | transexitcode: 0
[2025-04-14 09:49:38] 2025-04-14 13:49:18,501 | INFO     | exeerrorcode: 0
[2025-04-14 09:49:38] 2025-04-14 13:49:18,501 | INFO     | exeerrordiag: 
[2025-04-14 09:49:38] 2025-04-14 13:49:18,502 | INFO     | exitcode: 0
[2025-04-14 09:49:38] 2025-04-14 13:49:18,502 | INFO     | exitmsg: OK
[2025-04-14 09:49:38] 2025-04-14 13:49:18,502 | INFO     | cpuconsumptiontime: 48270 s
[2025-04-14 09:49:38] 2025-04-14 13:49:18,502 | INFO     | nevents: 400
[2025-04-14 09:49:38] 2025-04-14 13:49:18,502 | INFO     | neventsw: 0
[2025-04-14 09:49:38] 2025-04-14 13:49:18,502 | INFO     | pid: 9212
[2025-04-14 09:49:38] 2025-04-14 13:49:18,503 | INFO     | pgrp: 9212
[2025-04-14 09:49:38] 2025-04-14 13:49:18,503 | INFO     | corecount: 12
[2025-04-14 09:49:38] 2025-04-14 13:49:18,503 | INFO     | event service: False
[2025-04-14 09:49:38] 2025-04-14 13:49:18,503 | INFO     | sizes: {0: 2416534, 1: 2417390, 6: 2417596, 12: 2417624, 5081: 2443799, 5082: 2452923, 5088: 2453037}
[2025-04-14 09:49:38] 2025-04-14 13:49:18,503 | INFO     | --------------------------------------------------
[2025-04-14 09:49:38] 2025-04-14 13:49:18,503 | INFO     | 
[2025-04-14 09:49:38] 2025-04-14 13:49:18,504 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-14 09:49:38] 2025-04-14 13:49:18,527 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-14 09:49:38] 2025-04-14 13:49:18,527 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-14 09:49:38] 2025-04-14 13:49:18,527 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-14 09:49:38] 2025-04-14 13:49:18,527 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-14 09:49:38] 2025-04-14 13:49:18,528 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-14 09:49:38] 2025-04-14 13:49:18,528 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-14 09:49:38] 2025-04-14 13:49:18,528 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-14 09:49:38] 2025-04-14 13:49:18,528 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-14 09:49:38] 2025-04-14 13:49:18,528 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-14 09:49:38] 2025-04-14 13:49:18,528 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-14 09:49:38] 2025-04-14 13:49:18,529 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-14 09:49:38] 2025-04-14 13:49:18,529 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-14 09:49:38] 2025-04-14 13:49:18,529 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-14 09:49:38] 2025-04-14 13:49:18,529 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-14 09:49:38] 2025-04-14 13:49:18,529 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-14 09:49:38] 2025-04-14 13:49:18,529 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-14 09:49:38] 2025-04-14 13:49:18,530 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-14 09:49:38] 2025-04-14 13:49:18,530 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-14 09:49:38] 2025-04-14 13:49:18,530 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-14 09:49:38] 2025-04-14 13:49:18,530 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-14 09:49:38] 2025-04-14 13:49:18,530 | INFO     | job 6602116022 has completed (purged errors)
[2025-04-14 09:49:38] 2025-04-14 13:49:18,530 | INFO     | overall cleanup function is called
[2025-04-14 09:49:38] 2025-04-14 13:49:19,538 | INFO     | --- collectZombieJob: --- 10, [9212]
[2025-04-14 09:49:38] 2025-04-14 13:49:19,538 | INFO     | zombie collector waiting for pid 9212
[2025-04-14 09:49:38] 2025-04-14 13:49:19,538 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-14 09:49:38] 2025-04-14 13:49:19,538 | INFO     | collected zombie processes
[2025-04-14 09:49:38] 2025-04-14 13:49:19,538 | INFO     | will attempt to kill all subprocesses of pid=9212
[2025-04-14 09:49:38] 2025-04-14 13:49:19,627 | INFO     | process IDs to be killed: [9212] (in reverse order)
[2025-04-14 09:49:38] 2025-04-14 13:49:19,677 | WARNING  | found no corresponding commands to process id(s)
[2025-04-14 09:49:38] 2025-04-14 13:49:19,677 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-14 09:49:38] 2025-04-14 13:49:19,680 | INFO     | did not find any defunct processes belonging to 9212
[2025-04-14 09:49:38] 2025-04-14 13:49:19,682 | INFO     | did not find any defunct processes belonging to 9212
[2025-04-14 09:49:38] 2025-04-14 13:49:19,682 | INFO     | ready for new job
[2025-04-14 09:49:38] 2025-04-14 13:49:19,682 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-14 09:49:38] 2025-04-14 13:49:19,683 | INFO     | **************************************
[2025-04-14 09:49:38] 2025-04-14 13:49:19,684 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-14 09:49:38] 2025-04-14 13:49:19,684 | INFO     | **************************************
[2025-04-14 09:49:38] 2025-04-14 13:49:19,684 | INFO     | 
[2025-04-14 09:49:38] 2025-04-14 13:49:19,684 | INFO     | architecture information:
[2025-04-14 09:49:38] 2025-04-14 13:49:19,685 | INFO     | executing command: cat /etc/os-release
[2025-04-14 09:49:38] 2025-04-14 13:49:19,699 | INFO     | cat /etc/os-release:
[2025-04-14 09:49:38] NAME="CentOS Linux"
[2025-04-14 09:49:38] VERSION="7 (Core)"
[2025-04-14 09:49:38] ID="centos"
[2025-04-14 09:49:38] ID_LIKE="rhel fedora"
[2025-04-14 09:49:38] VERSION_ID="7"
[2025-04-14 09:49:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-14 09:49:38] ANSI_COLOR="0;31"
[2025-04-14 09:49:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-14 09:49:38] HOME_URL="https://www.centos.org/"
[2025-04-14 09:49:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-14 09:49:38] 
[2025-04-14 09:49:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-14 09:49:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-14 09:49:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-14 09:49:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-14 09:49:38] 
[2025-04-14 09:49:38] 2025-04-14 13:49:19,699 | INFO     | **************************************
[2025-04-14 09:49:38] 2025-04-14 13:49:20,202 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-14 09:49:38] 2025-04-14 13:49:20,217 | INFO     | sufficient remaining disk space (29396828160 B)
[2025-04-14 09:49:38] 2025-04-14 13:49:20,217 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-14 09:49:38] 2025-04-14 13:49:20,217 | INFO     | current server update state: UPDATING_FINAL
[2025-04-14 09:49:38] 2025-04-14 13:49:20,218 | INFO     | update_server=False
[2025-04-14 09:49:38] 2025-04-14 13:49:20,218 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-14 09:49:38] 2025-04-14 13:49:20,218 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-14 09:49:38] 2025-04-14 13:49:20,218 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-14 09:49:38] 2025-04-14 13:49:20,219 | INFO     | found 0 job(s) in 20 queues
[2025-04-14 09:49:38] 2025-04-14 13:49:20,219 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-14 09:49:38] 2025-04-14 13:49:20,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-14 09:49:38] 2025-04-14 13:49:20,301 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-14 09:49:38] 2025-04-14 13:49:20,333 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-14 09:49:38] 2025-04-14 13:49:20,333 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-14 09:49:38] 2025-04-14 13:49:20,334 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-14 09:49:38] 2025-04-14 13:49:20,334 | INFO     | will abort loop
[2025-04-14 09:49:38] 2025-04-14 13:49:20,418 | INFO     | all job control threads have been joined
[2025-04-14 09:49:38] 2025-04-14 13:49:20,580 | INFO     | all payload control threads have been joined
[2025-04-14 09:49:38] 2025-04-14 13:49:20,617 | INFO     | all data control threads have been joined
[2025-04-14 09:49:38] 2025-04-14 13:49:21,220 | INFO     | [job] queue monitor thread has finished
[2025-04-14 09:49:38] 2025-04-14 13:49:21,223 | INFO     | [job] retrieve thread has finished
[2025-04-14 09:49:38] 2025-04-14 13:49:21,339 | INFO     | [job] job monitor thread has finished
[2025-04-14 09:49:38] 2025-04-14 13:49:21,384 | INFO     | [payload] execute_payloads thread has finished
[2025-04-14 09:49:38] 2025-04-14 13:49:21,411 | INFO     | [payload] failed_post thread has finished
[2025-04-14 09:49:38] 2025-04-14 13:49:21,424 | INFO     | [job] control thread has finished
[2025-04-14 09:49:38] 2025-04-14 13:49:21,449 | INFO     | [job] validate thread has finished
[2025-04-14 09:49:38] 2025-04-14 13:49:21,586 | INFO     | [payload] control thread has finished
[2025-04-14 09:49:38] 2025-04-14 13:49:21,622 | INFO     | [data] control thread has finished
[2025-04-14 09:49:38] 2025-04-14 13:49:21,745 | INFO     | [job] create_data_payload thread has finished
[2025-04-14 09:49:38] 2025-04-14 13:49:21,875 | INFO     | [payload] validate_pre thread has finished
[2025-04-14 09:49:38] 2025-04-14 13:49:22,069 | INFO     | [payload] validate_post thread has finished
[2025-04-14 09:49:38] 2025-04-14 13:49:22,084 | INFO     | [data] copytool_in thread has finished
[2025-04-14 09:49:38] 2025-04-14 13:49:22,307 | INFO     | [data] copytool_out thread has finished
[2025-04-14 09:49:38] 2025-04-14 13:49:22,882 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-14 09:49:38] 2025-04-14 13:49:26,888 | INFO     | [data] queue_monitor thread has finished
[2025-04-14 09:49:38] 2025-04-14 13:49:30,392 | INFO     | job.realtimelogging is not enabled
[2025-04-14 09:49:38] 2025-04-14 13:49:31,397 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-14 09:49:38] 2025-04-14 13:49:32,846 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140179645298496)>', '<ExcThread(monitor, started 140179067102976)>']
[2025-04-14 09:49:38] 2025-04-14 13:49:33,277 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-14 09:49:38] 2025-04-14 13:49:33,277 | INFO     | [monitor] control thread has ended
[2025-04-14 09:49:38] 2025-04-14 13:49:37,871 | INFO     | all workflow threads have been joined
[2025-04-14 09:49:38] 2025-04-14 13:49:37,871 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-14 09:49:38] 2025-04-14 13:49:37,876 | INFO     | traces error code: 0
[2025-04-14 09:49:38] 2025-04-14 13:49:37,876 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-14 09:49:38] 2025-04-14 13:49:37,960 [wrapper] ==== pilot stdout END ====
[2025-04-14 09:49:38] 2025-04-14 13:49:37,964 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-14 09:49:38] 2025-04-14 13:49:37,967 [wrapper] pilotpid: 2779
[2025-04-14 09:49:38] 2025-04-14 13:49:37,970 [wrapper] Pilot exit status: 0
[2025-04-14 09:49:38] 2025-04-14 13:49:37,984 [wrapper] pandaids: 6602116022
[2025-04-14 09:49:38] 2025-04-14 13:49:38,021 [wrapper] cleanup supervisor_pilot 31974 2780
[2025-04-14 09:49:38] 2025-04-14 13:49:38,025 [wrapper] Test setup, not cleaning
[2025-04-14 09:49:38] 2025-04-14 13:49:38,029 [wrapper] apfmon messages muted
[2025-04-14 09:49:38] 2025-04-14 13:49:38,032 [wrapper] ==== wrapper stdout END ====
[2025-04-14 09:49:38] 2025-04-14 13:49:38,036 [wrapper] ==== wrapper stderr END ====
[2025-04-14 09:49:38]  *** Error codes and diagnostics ***
[2025-04-14 09:49:38]     "exeErrorCode": 0,
[2025-04-14 09:49:38]     "exeErrorDiag": "",
[2025-04-14 09:49:38]     "pilotErrorCode": 0,
[2025-04-14 09:49:38]     "pilotErrorDiag": "",
[2025-04-14 09:49:38]  *** Listing of results directory ***
[2025-04-14 09:49:38] total 418120
[2025-04-14 09:49:38] -rw-r--r-- 1 boincer umatlas    495897 Apr 14 00:24 pilot3.tar.gz
[2025-04-14 09:49:38] -rw-r--r-- 1 boincer umatlas      5111 Apr 14 00:29 queuedata.json
[2025-04-14 09:49:38] -rwx------ 1 boincer umatlas     37140 Apr 14 00:29 runpilot2-wrapper.sh
[2025-04-14 09:49:38] -rw-r--r-- 1 boincer umatlas       100 Apr 14 08:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-14 09:49:38] -rwxr-xr-x 1 boincer umatlas      7986 Apr 14 08:23 run_atlas
[2025-04-14 09:49:38] -rw-r--r-- 1 boincer umatlas       105 Apr 14 08:23 job.xml
[2025-04-14 09:49:38] -rw-r--r-- 2 boincer umatlas 223065064 Apr 14 08:23 EVNT.44075481._000502.pool.root.1
[2025-04-14 09:49:38] -rw-r--r-- 2 boincer umatlas     17569 Apr 14 08:23 start_atlas.sh
[2025-04-14 09:49:38] drwxrwx--x 2 boincer umatlas      4096 Apr 14 08:23 shared
[2025-04-14 09:49:38] -rw-r--r-- 2 boincer umatlas    508887 Apr 14 08:23 input.tar.gz
[2025-04-14 09:49:38] -rw-r--r-- 1 boincer umatlas         0 Apr 14 08:23 boinc_lockfile
[2025-04-14 09:49:38] -rw-r--r-- 1 boincer umatlas      2577 Apr 14 08:24 pandaJob.out
[2025-04-14 09:49:38] -rw------- 1 boincer umatlas       424 Apr 14 08:24 setup.sh.local
[2025-04-14 09:49:38] -rw------- 1 boincer umatlas    986127 Apr 14 08:24 agis_schedconf.cvmfs.json
[2025-04-14 09:49:38] -rw------- 1 boincer umatlas   1603529 Apr 14 08:24 agis_ddmendpoints.agis.ALL.json
[2025-04-14 09:49:38] drwx------ 4 boincer umatlas      4096 Apr 14 08:24 pilot3
[2025-04-14 09:49:38] -rw-r--r-- 1 boincer umatlas      5868 Apr 14 09:46 init_data.xml
[2025-04-14 09:49:38] -rw------- 1 boincer umatlas 199569957 Apr 14 09:48 HITS.44075483._012740.pool.root.1
[2025-04-14 09:49:38] -rw-r--r-- 1 boincer umatlas       530 Apr 14 09:49 boinc_task_state.xml
[2025-04-14 09:49:38] -rw------- 1 boincer umatlas      1048 Apr 14 09:49 memory_monitor_summary.json
[2025-04-14 09:49:38] -rw------- 1 boincer umatlas    354120 Apr 14 09:49 log.44075483._012740.job.log.tgz.1
[2025-04-14 09:49:38] -rw------- 1 boincer umatlas        95 Apr 14 09:49 pilot_heartbeat.json
[2025-04-14 09:49:38] -rw------- 1 boincer umatlas      7748 Apr 14 09:49 heartbeat.json
[2025-04-14 09:49:38] -rw-r--r-- 1 boincer umatlas      8192 Apr 14 09:49 boinc_mmap_file
[2025-04-14 09:49:38] -rw-r--r-- 1 boincer umatlas        27 Apr 14 09:49 wrapper_checkpoint.txt
[2025-04-14 09:49:38] -rw------- 1 boincer umatlas      4734 Apr 14 09:49 pilotlog.txt
[2025-04-14 09:49:38] -rw------- 1 boincer umatlas    482459 Apr 14 09:49 log.44075483._012740.job.log.1
[2025-04-14 09:49:38] -rw------- 1 boincer umatlas       357 Apr 14 09:49 output.list
[2025-04-14 09:49:38] -rw-r--r-- 1 boincer umatlas       620 Apr 14 09:49 runtime_log
[2025-04-14 09:49:38] -rw------- 1 boincer umatlas    860160 Apr 14 09:49 result.tar.gz
[2025-04-14 09:49:38] -rw-r--r-- 1 boincer umatlas     11015 Apr 14 09:49 runtime_log.err
[2025-04-14 09:49:38] -rw------- 1 boincer umatlas       658 Apr 14 09:49 ciALDmLdQO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmWUVLDmdC7Jwn.diag
[2025-04-14 09:49:38] -rw-r--r-- 1 boincer umatlas     21623 Apr 14 09:49 stderr.txt
[2025-04-14 09:49:38] HITS file was successfully produced:
[2025-04-14 09:49:38] -rw------- 1 boincer umatlas 199569957 Apr 14 09:48 shared/HITS.pool.root.1
[2025-04-14 09:49:38]  *** Contents of shared directory: ***
[2025-04-14 09:49:38] total 414100
[2025-04-14 09:49:38] -rw-r--r-- 2 boincer umatlas 223065064 Apr 14 08:23 ATLAS.root_0
[2025-04-14 09:49:38] -rw-r--r-- 2 boincer umatlas     17569 Apr 14 08:23 start_atlas.sh
[2025-04-14 09:49:38] -rw-r--r-- 2 boincer umatlas    508887 Apr 14 08:23 input.tar.gz
[2025-04-14 09:49:38] -rw------- 1 boincer umatlas 199569957 Apr 14 09:48 HITS.pool.root.1
[2025-04-14 09:49:38] -rw------- 1 boincer umatlas    860160 Apr 14 09:49 result.tar.gz
09:49:39 (31427): run_atlas exited; CPU time 48252.048195
09:49:39 (31427): called boinc_finish(0)

</stderr_txt>
]]>

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