Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:53:44 (3902719): wrapper (7.7.26015): starting
08:53:44 (3902719): wrapper: running run_atlas (--nthreads 9)
[2025-04-14 08:53:44] Arguments: --nthreads 9
[2025-04-14 08:53:44] Threads: 9
[2025-04-14 08:53:44] Checking for CVMFS
[2025-04-14 08:53:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-14 08:53:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-14 08:53:45] Running cvmfs_config stat atlas.cern.ch
[2025-04-14 08:53:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-14 08:53:46] 2.12.6.0 1544937 146945 321540 144849 0 495 18500154 32935937 14342 130560 0 48605755 99.607 51962396 28597 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-14 08:53:46] CVMFS is ok
[2025-04-14 08:53:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-14 08:53:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-14 08:53:46] Further information can be found at the LHC@home message board.
[2025-04-14 08:53:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-14 08:53:46] Checking for apptainer binary...
[2025-04-14 08:53:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-14 08:53:46] Running /usr/bin/apptainer --version
[2025-04-14 08:53:47] apptainer version 1.4.0-1.el9
[2025-04-14 08:53:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-14 08:54:07] c6-5-7-2.aglt2.org
[2025-04-14 08:54:07] apptainer works
[2025-04-14 08:54:07] Set ATHENA_PROC_NUMBER=9
[2025-04-14 08:54:07] Set ATHENA_CORE_NUMBER=9
[2025-04-14 08:54:07] Starting ATLAS job with PandaID=6602113131
[2025-04-14 08:54:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-14 14:33:14]  *** The last 200 lines of the pilot log: ***
[2025-04-14 14:33:14] 2025-04-14 18:32:57,330 | INFO     | sum of deviations: 120658202621.6687
[2025-04-14 14:33:14] 2025-04-14 18:32:57,330 | INFO     | mean x: 1744645482.3920972
[2025-04-14 14:33:14] 2025-04-14 18:32:57,330 | INFO     | mean y: 2310040.103343465
[2025-04-14 14:33:14] 2025-04-14 18:32:57,330 | INFO     | -- intersect: -19061607917.659508
[2025-04-14 14:33:14] 2025-04-14 18:32:57,330 | INFO     | intersect: -19061607917.659508
[2025-04-14 14:33:14] 2025-04-14 18:32:57,331 | INFO     | chi2: 7.065565178194481
[2025-04-14 14:33:14] 2025-04-14 18:32:57,340 | INFO     | sum of square deviations: 10546282646.432047
[2025-04-14 14:33:14] 2025-04-14 18:32:57,348 | INFO     | sum of deviations: 143916513453.25323
[2025-04-14 14:33:14] 2025-04-14 18:32:57,349 | INFO     | mean x: 1744645329.8950617
[2025-04-14 14:33:14] 2025-04-14 18:32:57,349 | INFO     | mean y: 2317138.595679012
[2025-04-14 14:33:14] 2025-04-14 18:32:57,349 | INFO     | -- intersect: -23805434038.63481
[2025-04-14 14:33:14] 2025-04-14 18:32:57,349 | INFO     | intersect: -23805434038.63481
[2025-04-14 14:33:14] 2025-04-14 18:32:57,350 | INFO     | chi2: 6.380809626610264
[2025-04-14 14:33:14] 2025-04-14 18:32:57,350 | INFO     | current chi2=6.380809626610264 (change=9.691447666458261 %)
[2025-04-14 14:33:14] 2025-04-14 18:32:57,350 | INFO     | right removable region: 323
[2025-04-14 14:33:14] 2025-04-14 18:32:57,351 | INFO     | sum of square deviations: 10546224025.638931
[2025-04-14 14:33:14] 2025-04-14 18:32:57,362 | INFO     | sum of deviations: 33181202344.898106
[2025-04-14 14:33:14] 2025-04-14 18:32:57,362 | INFO     | mean x: 1744645634.898148
[2025-04-14 14:33:14] 2025-04-14 18:32:57,362 | INFO     | mean y: 2336899.6635802467
[2025-04-14 14:33:14] 2025-04-14 18:32:57,362 | INFO     | -- intersect: -5486778416.961937
[2025-04-14 14:33:14] 2025-04-14 18:32:57,362 | INFO     | intersect: -5486778416.961937
[2025-04-14 14:33:14] 2025-04-14 18:32:57,362 | INFO     | chi2: 3.8274344195857797
[2025-04-14 14:33:14] 2025-04-14 18:32:57,363 | INFO     | current chi2=3.8274344195857797 (change=45.82974860386421 %)
[2025-04-14 14:33:14] 2025-04-14 18:32:57,363 | INFO     | sum of square deviations: 10065412874.833841
[2025-04-14 14:33:14] 2025-04-14 18:32:57,373 | INFO     | sum of deviations: -26855449405.351074
[2025-04-14 14:33:14] 2025-04-14 18:32:57,374 | INFO     | mean x: 1744645787.4043887
[2025-04-14 14:33:14] 2025-04-14 18:32:57,374 | INFO     | mean y: 2355932.250783699
[2025-04-14 14:33:14] 2025-04-14 18:32:57,374 | INFO     | -- intersect: 4657231718.920479
[2025-04-14 14:33:14] 2025-04-14 18:32:57,374 | INFO     | intersect: 4657231718.920479
[2025-04-14 14:33:14] 2025-04-14 18:32:57,374 | INFO     | chi2: 2.351447871095849
[2025-04-14 14:33:14] 2025-04-14 18:32:57,374 | INFO     | current chi2=2.351447871095849 (change=38.563339999687514 %)
[2025-04-14 14:33:14] 2025-04-14 18:32:57,375 | INFO     | sum of square deviations: 9599439211.503212
[2025-04-14 14:33:14] 2025-04-14 18:32:57,385 | INFO     | sum of deviations: -81555465173.9108
[2025-04-14 14:33:14] 2025-04-14 18:32:57,385 | INFO     | mean x: 1744645939.910828
[2025-04-14 14:33:14] 2025-04-14 18:32:57,386 | INFO     | mean y: 2373835.5031847134
[2025-04-14 14:33:14] 2025-04-14 18:32:57,386 | INFO     | -- intersect: 14824636684.222387
[2025-04-14 14:33:14] 2025-04-14 18:32:57,386 | INFO     | intersect: 14824636684.222387
[2025-04-14 14:33:14] 2025-04-14 18:32:57,386 | INFO     | chi2: 1.1128241137770962
[2025-04-14 14:33:14] 2025-04-14 18:32:57,386 | INFO     | current chi2=1.1128241137770962 (change=52.67494008878517 %)
[2025-04-14 14:33:14] 2025-04-14 18:32:57,387 | INFO     | sum of square deviations: 9148089504.977406
[2025-04-14 14:33:14] 2025-04-14 18:32:57,397 | INFO     | sum of deviations: -101977217610.85439
[2025-04-14 14:33:14] 2025-04-14 18:32:57,397 | INFO     | mean x: 1744646092.4142394
[2025-04-14 14:33:14] 2025-04-14 18:32:57,397 | INFO     | mean y: 2380708.194174757
[2025-04-14 14:33:14] 2025-04-14 18:32:57,397 | INFO     | -- intersect: 19450611305.768887
[2025-04-14 14:33:14] 2025-04-14 18:32:57,397 | INFO     | intersect: 19450611305.768887
[2025-04-14 14:33:14] 2025-04-14 18:32:57,398 | INFO     | chi2: 0.8609562241893076
[2025-04-14 14:33:14] 2025-04-14 18:32:57,398 | INFO     | current chi2=0.8609562241893076 (change=22.633216378903782 %)
[2025-04-14 14:33:14] 2025-04-14 18:32:57,398 | INFO     | left removable region: 40
[2025-04-14 14:33:14] 2025-04-14 18:32:57,398 | INFO     | sum of square deviations: 7027558211.540621
[2025-04-14 14:33:14] 2025-04-14 18:32:57,410 | INFO     | sum of deviations: -69160865605.52654
[2025-04-14 14:33:14] 2025-04-14 18:32:57,411 | INFO     | mean x: 1744646519.434629
[2025-04-14 14:33:14] 2025-04-14 18:32:57,411 | INFO     | mean y: 2388025.890459364
[2025-04-14 14:33:14] 2025-04-14 18:32:57,411 | INFO     | -- intersect: 17172116091.837845
[2025-04-14 14:33:14] 2025-04-14 18:32:57,411 | INFO     | intersect: 17172116091.837845
[2025-04-14 14:33:14] 2025-04-14 18:32:57,411 | INFO     | chi2: 0.13452014781975613
[2025-04-14 14:33:14] 2025-04-14 18:32:57,411 | INFO     | -- intersect: 17172116091.837845
[2025-04-14 14:33:14] 2025-04-14 18:32:57,412 | INFO     | current memory leak: -9.84 B/s (using 283 data points, chi2=0.13)
[2025-04-14 14:33:14] 2025-04-14 18:32:57,412 | INFO     | ..............................
[2025-04-14 14:33:14] 2025-04-14 18:32:57,412 | INFO     | . Timing measurements:
[2025-04-14 14:33:14] 2025-04-14 18:32:57,412 | INFO     | . get job = 0 s
[2025-04-14 14:33:14] 2025-04-14 18:32:57,412 | INFO     | . initial setup = 7 s
[2025-04-14 14:33:14] 2025-04-14 18:32:57,412 | INFO     | . payload setup = 44 s
[2025-04-14 14:33:14] 2025-04-14 18:32:57,413 | INFO     | . stage-in = 0 s
[2025-04-14 14:33:14] 2025-04-14 18:32:57,413 | INFO     | . payload execution = 20077 s
[2025-04-14 14:33:14] 2025-04-14 18:32:57,413 | INFO     | . stage-out = 9 s
[2025-04-14 14:33:14] 2025-04-14 18:32:57,413 | INFO     | . log creation = 2 s
[2025-04-14 14:33:14] 2025-04-14 18:32:57,413 | INFO     | ..............................
[2025-04-14 14:33:14] 2025-04-14 18:32:57,899 | INFO     | 
[2025-04-14 14:33:14] 2025-04-14 18:32:57,900 | INFO     | job summary report
[2025-04-14 14:33:14] 2025-04-14 18:32:57,900 | INFO     | --------------------------------------------------
[2025-04-14 14:33:14] 2025-04-14 18:32:57,900 | INFO     | PanDA job id: 6602113131
[2025-04-14 14:33:14] 2025-04-14 18:32:57,900 | INFO     | task id: 44075483
[2025-04-14 14:33:14] 2025-04-14 18:32:57,900 | INFO     | errors: (none)
[2025-04-14 14:33:14] 2025-04-14 18:32:57,900 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-14 14:33:14] 2025-04-14 18:32:57,900 | INFO     | pilot state: finished 
[2025-04-14 14:33:14] 2025-04-14 18:32:57,900 | INFO     | transexitcode: 0
[2025-04-14 14:33:14] 2025-04-14 18:32:57,900 | INFO     | exeerrorcode: 0
[2025-04-14 14:33:14] 2025-04-14 18:32:57,901 | INFO     | exeerrordiag: 
[2025-04-14 14:33:14] 2025-04-14 18:32:57,901 | INFO     | exitcode: 0
[2025-04-14 14:33:14] 2025-04-14 18:32:57,901 | INFO     | exitmsg: OK
[2025-04-14 14:33:14] 2025-04-14 18:32:57,901 | INFO     | cpuconsumptiontime: 40632 s
[2025-04-14 14:33:14] 2025-04-14 18:32:57,901 | INFO     | nevents: 400
[2025-04-14 14:33:14] 2025-04-14 18:32:57,901 | INFO     | neventsw: 0
[2025-04-14 14:33:14] 2025-04-14 18:32:57,901 | INFO     | pid: 3920719
[2025-04-14 14:33:14] 2025-04-14 18:32:57,901 | INFO     | pgrp: 3920719
[2025-04-14 14:33:14] 2025-04-14 18:32:57,901 | INFO     | corecount: 9
[2025-04-14 14:33:14] 2025-04-14 18:32:57,901 | INFO     | event service: False
[2025-04-14 14:33:14] 2025-04-14 18:32:57,901 | INFO     | sizes: {0: 2416536, 1: 2417137, 2: 2417249, 3: 2417448, 4: 2417448, 16: 2417476, 27: 2417632, 38: 2394026, 39: 2417894, 49: 2417922, 20126: 2451191, 20127: 2451470
[2025-04-14 14:33:14] 2025-04-14 18:32:57,902 | INFO     | --------------------------------------------------
[2025-04-14 14:33:14] 2025-04-14 18:32:57,902 | INFO     | 
[2025-04-14 14:33:14] 2025-04-14 18:32:57,902 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-14 14:33:14] 2025-04-14 18:32:57,984 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-14 14:33:14] 2025-04-14 18:32:57,984 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-14 14:33:14] 2025-04-14 18:32:57,984 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-14 14:33:14] 2025-04-14 18:32:57,984 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-14 14:33:14] 2025-04-14 18:32:57,984 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-14 14:33:14] 2025-04-14 18:32:57,984 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-14 14:33:14] 2025-04-14 18:32:57,985 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-14 14:33:14] 2025-04-14 18:32:57,985 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-14 14:33:14] 2025-04-14 18:32:57,985 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-14 14:33:14] 2025-04-14 18:32:57,985 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-14 14:33:14] 2025-04-14 18:32:57,985 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-14 14:33:14] 2025-04-14 18:32:57,985 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-14 14:33:14] 2025-04-14 18:32:57,985 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-14 14:33:14] 2025-04-14 18:32:57,985 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-14 14:33:14] 2025-04-14 18:32:57,985 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-14 14:33:14] 2025-04-14 18:32:57,985 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-14 14:33:14] 2025-04-14 18:32:57,985 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-14 14:33:14] 2025-04-14 18:32:57,985 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-14 14:33:14] 2025-04-14 18:32:57,986 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-14 14:33:14] 2025-04-14 18:32:57,986 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-14 14:33:14] 2025-04-14 18:32:57,986 | INFO     | job 6602113131 has completed (purged errors)
[2025-04-14 14:33:14] 2025-04-14 18:32:57,986 | INFO     | overall cleanup function is called
[2025-04-14 14:33:14] 2025-04-14 18:32:58,999 | INFO     | --- collectZombieJob: --- 10, [3920719]
[2025-04-14 14:33:14] 2025-04-14 18:32:59,000 | INFO     | zombie collector waiting for pid 3920719
[2025-04-14 14:33:14] 2025-04-14 18:32:59,000 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-14 14:33:14] 2025-04-14 18:32:59,000 | INFO     | collected zombie processes
[2025-04-14 14:33:14] 2025-04-14 18:32:59,000 | INFO     | will attempt to kill all subprocesses of pid=3920719
[2025-04-14 14:33:14] 2025-04-14 18:32:59,845 | INFO     | process IDs to be killed: [3920719] (in reverse order)
[2025-04-14 14:33:14] 2025-04-14 18:33:00,101 | WARNING  | found no corresponding commands to process id(s)
[2025-04-14 14:33:14] 2025-04-14 18:33:00,102 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-14 14:33:14] 2025-04-14 18:33:00,128 | INFO     | did not find any defunct processes belonging to 3920719
[2025-04-14 14:33:14] 2025-04-14 18:33:00,150 | INFO     | did not find any defunct processes belonging to 3920719
[2025-04-14 14:33:14] 2025-04-14 18:33:00,151 | INFO     | ready for new job
[2025-04-14 14:33:14] 2025-04-14 18:33:00,151 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-14 14:33:14] 2025-04-14 18:33:00,157 | INFO     | **************************************
[2025-04-14 14:33:14] 2025-04-14 18:33:00,157 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-14 14:33:14] 2025-04-14 18:33:00,157 | INFO     | **************************************
[2025-04-14 14:33:14] 2025-04-14 18:33:00,157 | INFO     | 
[2025-04-14 14:33:14] 2025-04-14 18:33:00,174 | INFO     | architecture information:
[2025-04-14 14:33:14] 2025-04-14 18:33:00,178 | INFO     | executing command: cat /etc/os-release
[2025-04-14 14:33:14] 2025-04-14 18:33:00,197 | INFO     | cat /etc/os-release:
[2025-04-14 14:33:14] NAME="CentOS Linux"
[2025-04-14 14:33:14] VERSION="7 (Core)"
[2025-04-14 14:33:14] ID="centos"
[2025-04-14 14:33:14] ID_LIKE="rhel fedora"
[2025-04-14 14:33:14] VERSION_ID="7"
[2025-04-14 14:33:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-14 14:33:14] ANSI_COLOR="0;31"
[2025-04-14 14:33:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-14 14:33:14] HOME_URL="https://www.centos.org/"
[2025-04-14 14:33:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-14 14:33:14] 
[2025-04-14 14:33:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-14 14:33:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-14 14:33:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-14 14:33:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-14 14:33:14] 
[2025-04-14 14:33:14] 2025-04-14 18:33:00,197 | INFO     | **************************************
[2025-04-14 14:33:14] 2025-04-14 18:33:00,700 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-14 14:33:14] 2025-04-14 18:33:00,769 | INFO     | sufficient remaining disk space (75212259328 B)
[2025-04-14 14:33:14] 2025-04-14 18:33:00,769 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-14 14:33:14] 2025-04-14 18:33:00,769 | INFO     | current server update state: UPDATING_FINAL
[2025-04-14 14:33:14] 2025-04-14 18:33:00,769 | INFO     | update_server=False
[2025-04-14 14:33:14] 2025-04-14 18:33:00,769 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-14 14:33:14] 2025-04-14 18:33:00,770 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-14 14:33:14] 2025-04-14 18:33:00,770 | INFO     | found 0 job(s) in 20 queues
[2025-04-14 14:33:14] 2025-04-14 18:33:00,770 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-14 14:33:14] 2025-04-14 18:33:00,770 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-14 14:33:14] 2025-04-14 18:33:00,770 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-14 14:33:14] 2025-04-14 18:33:00,770 | INFO     | aborting loop
[2025-04-14 14:33:14] 2025-04-14 18:33:00,772 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-14 14:33:14] 2025-04-14 18:33:00,816 | INFO     | all payload control threads have been joined
[2025-04-14 14:33:14] 2025-04-14 18:33:00,919 | INFO     | all job control threads have been joined
[2025-04-14 14:33:14] 2025-04-14 18:33:01,548 | INFO     | all data control threads have been joined
[2025-04-14 14:33:14] 2025-04-14 18:33:01,775 | INFO     | [job] retrieve thread has finished
[2025-04-14 14:33:14] 2025-04-14 18:33:01,776 | INFO     | [job] job monitor thread has finished
[2025-04-14 14:33:14] 2025-04-14 18:33:01,782 | INFO     | [payload] validate_post thread has finished
[2025-04-14 14:33:14] 2025-04-14 18:33:01,783 | INFO     | [payload] failed_post thread has finished
[2025-04-14 14:33:14] 2025-04-14 18:33:01,822 | INFO     | [payload] control thread has finished
[2025-04-14 14:33:14] 2025-04-14 18:33:01,927 | INFO     | [job] control thread has finished
[2025-04-14 14:33:14] 2025-04-14 18:33:01,995 | INFO     | [job] validate thread has finished
[2025-04-14 14:33:14] 2025-04-14 18:33:01,998 | INFO     | [job] create_data_payload thread has finished
[2025-04-14 14:33:14] 2025-04-14 18:33:02,081 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-14 14:33:14] 2025-04-14 18:33:02,554 | INFO     | [data] control thread has finished
[2025-04-14 14:33:14] 2025-04-14 18:33:02,589 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-14 14:33:14] 2025-04-14 18:33:02,605 | INFO     | [payload] execute_payloads thread has finished
[2025-04-14 14:33:14] 2025-04-14 18:33:02,615 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-14 14:33:14] 2025-04-14 18:33:02,783 | INFO     | [data] copytool_out thread has finished
[2025-04-14 14:33:14] 2025-04-14 18:33:02,916 | INFO     | [data] copytool_in thread has finished
[2025-04-14 14:33:14] 2025-04-14 18:33:02,965 | INFO     | [payload] validate_pre thread has finished
[2025-04-14 14:33:14] 2025-04-14 18:33:03,620 | INFO     | [job] queue monitor thread has finished
[2025-04-14 14:33:14] 2025-04-14 18:33:06,110 | INFO     | [data] queue_monitor thread has finished
[2025-04-14 14:33:14] 2025-04-14 18:33:07,407 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139909531309888)>', '<ExcThread(monitor, started 139908794529536)>']
[2025-04-14 14:33:14] 2025-04-14 18:33:07,834 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-14 14:33:14] 2025-04-14 18:33:07,835 | INFO     | [monitor] control thread has ended
[2025-04-14 14:33:14] 2025-04-14 18:33:12,433 | INFO     | all workflow threads have been joined
[2025-04-14 14:33:14] 2025-04-14 18:33:12,434 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-14 14:33:14] 2025-04-14 18:33:12,434 | INFO     | traces error code: 0
[2025-04-14 14:33:14] 2025-04-14 18:33:12,435 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-14 14:33:14] 2025-04-14 18:33:13,268 [wrapper] ==== pilot stdout END ====
[2025-04-14 14:33:14] 2025-04-14 18:33:13,284 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-14 14:33:14] 2025-04-14 18:33:13,299 [wrapper] pilotpid: 3907738
[2025-04-14 14:33:14] 2025-04-14 18:33:13,345 [wrapper] Pilot exit status: 0
[2025-04-14 14:33:14] 2025-04-14 18:33:13,617 [wrapper] pandaids: 6602113131
[2025-04-14 14:33:14] 2025-04-14 18:33:13,782 [wrapper] cleanup supervisor_pilot  789897 3907739
[2025-04-14 14:33:14] 2025-04-14 18:33:13,786 [wrapper] Test setup, not cleaning
[2025-04-14 14:33:14] 2025-04-14 18:33:13,789 [wrapper] apfmon messages muted
[2025-04-14 14:33:14] 2025-04-14 18:33:13,792 [wrapper] ==== wrapper stdout END ====
[2025-04-14 14:33:14] 2025-04-14 18:33:13,795 [wrapper] ==== wrapper stderr END ====
[2025-04-14 14:33:14]  *** Error codes and diagnostics ***
[2025-04-14 14:33:14]     "exeErrorCode": 0,
[2025-04-14 14:33:14]     "exeErrorDiag": "",
[2025-04-14 14:33:14]     "pilotErrorCode": 0,
[2025-04-14 14:33:14]     "pilotErrorDiag": "",
[2025-04-14 14:33:14]  *** Listing of results directory ***
[2025-04-14 14:33:14] total 417440
[2025-04-14 14:33:14] -rw-r--r--. 1 boincer umatlas    495897 Apr 13 22:25 pilot3.tar.gz
[2025-04-14 14:33:14] -rw-r--r--. 1 boincer umatlas      5111 Apr 13 22:31 queuedata.json
[2025-04-14 14:33:14] -rwx------. 1 boincer umatlas     37140 Apr 13 22:32 runpilot2-wrapper.sh
[2025-04-14 14:33:14] -rw-r--r--. 1 boincer umatlas       100 Apr 14 08:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-14 14:33:14] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 14 08:53 run_atlas
[2025-04-14 14:33:14] -rw-r--r--. 1 boincer umatlas       105 Apr 14 08:53 job.xml
[2025-04-14 14:33:14] -rw-r--r--. 2 boincer umatlas 222237244 Apr 14 08:53 EVNT.44075481._000465.pool.root.1
[2025-04-14 14:33:14] -rw-r--r--. 2 boincer umatlas     17569 Apr 14 08:53 start_atlas.sh
[2025-04-14 14:33:14] drwxrwx--x. 2 boincer umatlas      4096 Apr 14 08:53 shared
[2025-04-14 14:33:14] -rw-r--r--. 2 boincer umatlas    508887 Apr 14 08:53 input.tar.gz
[2025-04-14 14:33:14] -rw-r--r--. 1 boincer umatlas         0 Apr 14 08:53 boinc_lockfile
[2025-04-14 14:33:14] -rw-r--r--. 1 boincer umatlas      2578 Apr 14 08:54 pandaJob.out
[2025-04-14 14:33:14] -rw-------. 1 boincer umatlas       467 Apr 14 08:54 setup.sh.local
[2025-04-14 14:33:14] -rw-------. 1 boincer umatlas    986127 Apr 14 08:55 agis_schedconf.cvmfs.json
[2025-04-14 14:33:14] drwx------. 4 boincer umatlas      4096 Apr 14 08:55 pilot3
[2025-04-14 14:33:14] -rw-r--r--. 1 boincer umatlas      6840 Apr 14 14:28 init_data.xml
[2025-04-14 14:33:14] -rw-------. 1 boincer umatlas 197005530 Apr 14 14:30 HITS.44075483._011834.pool.root.1
[2025-04-14 14:33:14] -rw-r--r--. 1 boincer umatlas       531 Apr 14 14:30 boinc_task_state.xml
[2025-04-14 14:33:14] -rw-------. 1 boincer umatlas      1053 Apr 14 14:32 memory_monitor_summary.json
[2025-04-14 14:33:14] -rw-------. 1 boincer umatlas   1603529 Apr 14 14:32 agis_ddmendpoints.agis.ALL.json
[2025-04-14 14:33:14] -rw-------. 1 boincer umatlas    474482 Apr 14 14:32 log.44075483._011834.job.log.tgz.1
[2025-04-14 14:33:14] -rw-------. 1 boincer umatlas        95 Apr 14 14:32 pilot_heartbeat.json
[2025-04-14 14:33:14] -rw-------. 1 boincer umatlas      7747 Apr 14 14:32 heartbeat.json
[2025-04-14 14:33:14] -rw-r--r--. 1 boincer umatlas        28 Apr 14 14:33 wrapper_checkpoint.txt
[2025-04-14 14:33:14] -rw-r--r--. 1 boincer umatlas      8192 Apr 14 14:33 boinc_mmap_file
[2025-04-14 14:33:14] -rw-------. 1 boincer umatlas      4476 Apr 14 14:33 pilotlog.txt
[2025-04-14 14:33:14] -rw-------. 1 boincer umatlas   1712202 Apr 14 14:33 log.44075483._011834.job.log.1
[2025-04-14 14:33:14] -rw-------. 1 boincer umatlas       357 Apr 14 14:33 output.list
[2025-04-14 14:33:14] -rw-r--r--. 1 boincer umatlas       620 Apr 14 14:33 runtime_log
[2025-04-14 14:33:14] -rw-------. 1 boincer umatlas   2201600 Apr 14 14:33 result.tar.gz
[2025-04-14 14:33:14] -rw-r--r--. 1 boincer umatlas     11419 Apr 14 14:33 runtime_log.err
[2025-04-14 14:33:14] -rw-------. 1 boincer umatlas       659 Apr 14 14:33 8EQLDm6nOO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmUKVLDmSsbXtn.diag
[2025-04-14 14:33:14] -rw-r--r--. 1 boincer umatlas     20891 Apr 14 14:33 stderr.txt
[2025-04-14 14:33:14] HITS file was successfully produced:
[2025-04-14 14:33:14] -rw-------. 1 boincer umatlas 197005530 Apr 14 14:30 shared/HITS.pool.root.1
[2025-04-14 14:33:14]  *** Contents of shared directory: ***
[2025-04-14 14:33:14] total 412100
[2025-04-14 14:33:14] -rw-r--r--. 2 boincer umatlas 222237244 Apr 14 08:53 ATLAS.root_0
[2025-04-14 14:33:14] -rw-r--r--. 2 boincer umatlas     17569 Apr 14 08:53 start_atlas.sh
[2025-04-14 14:33:14] -rw-r--r--. 2 boincer umatlas    508887 Apr 14 08:53 input.tar.gz
[2025-04-14 14:33:14] -rw-------. 1 boincer umatlas 197005530 Apr 14 14:30 HITS.pool.root.1
[2025-04-14 14:33:14] -rw-------. 1 boincer umatlas   2201600 Apr 14 14:33 result.tar.gz
14:33:16 (3902719): run_atlas exited; CPU time 41217.194330
14:33:16 (3902719): called boinc_finish(0)

</stderr_txt>
]]>

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