Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:42:15 (4126575): wrapper (7.7.26015): starting
10:42:15 (4126575): wrapper: running run_atlas (--nthreads 9)
[2025-04-14 10:42:15] Arguments: --nthreads 9
[2025-04-14 10:42:15] Threads: 9
[2025-04-14 10:42:15] Checking for CVMFS
[2025-04-14 10:42:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-14 10:42:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-14 10:42:17] Running cvmfs_config stat atlas.cern.ch
[2025-04-14 10:42:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-14 10:42:20] 2.12.6.0 4946 20128 144244 144852 2 199 30883716 32935937 15228 130560 0 45701309 99.517 53994395 26201 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-14 10:42:20] CVMFS is ok
[2025-04-14 10:42:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-14 10:42:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-14 10:42:20] Further information can be found at the LHC@home message board.
[2025-04-14 10:42:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-14 10:42:20] Checking for apptainer binary...
[2025-04-14 10:42:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-14 10:42:20] Running /usr/bin/apptainer --version
[2025-04-14 10:42:20] apptainer version 1.4.0-1.el9
[2025-04-14 10:42:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-14 10:42:21] c6-6-39-2.aglt2.org
[2025-04-14 10:42:21] apptainer works
[2025-04-14 10:42:21] Set ATHENA_PROC_NUMBER=9
[2025-04-14 10:42:21] Set ATHENA_CORE_NUMBER=9
[2025-04-14 10:42:21] Starting ATLAS job with PandaID=6602105207
[2025-04-14 10:42:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-14 16:42:44]  *** The last 200 lines of the pilot log: ***
[2025-04-14 16:42:44] 2025-04-14 20:42:19,570 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-14 16:42:44] 2025-04-14 20:42:19,740 | INFO     | PID=4131217 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-14 16:42:44] 2025-04-14 20:42:19,740 | INFO     | .. there are 17 such processes running
[2025-04-14 16:42:44] 2025-04-14 20:42:22,078 | INFO     | monitor loop #1273: job 0:6602105207 is in state 'finished'
[2025-04-14 16:42:44] 2025-04-14 20:42:22,079 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-14 16:42:44] 2025-04-14 20:42:24,583 | INFO     | monitor loop #1274: job 0:6602105207 is in state 'finished'
[2025-04-14 16:42:44] 2025-04-14 20:42:24,583 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-14 16:42:44] 2025-04-14 20:42:25,250 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-14 16:42:44] 2025-04-14 20:42:25,251 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6602105207/memory_monitor_summary.json (trf name=prmon)
[2025-04-14 16:42:44] 2025-04-14 20:42:25,252 | INFO     | extracted standard info from prmon json
[2025-04-14 16:42:44] 2025-04-14 20:42:25,252 | INFO     | extracted standard memory fields from prmon json
[2025-04-14 16:42:44] 2025-04-14 20:42:25,252 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-14 16:42:44] 2025-04-14 20:42:25,256 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-14 16:42:44] 2025-04-14 20:42:25,257 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-14 16:42:44] 2025-04-14 20:42:25,264 | INFO     | fitting pss+swap vs Time
[2025-04-14 16:42:44] 2025-04-14 20:42:25,265 | INFO     | sum of square deviations: 13181150813.942669
[2025-04-14 16:42:44] 2025-04-14 20:42:25,268 | INFO     | sum of deviations: 208063527209.3408
[2025-04-14 16:42:44] 2025-04-14 20:42:25,268 | INFO     | mean x: 1744652626.644699
[2025-04-14 16:42:44] 2025-04-14 20:42:25,269 | INFO     | mean y: 2185752.9140401147
[2025-04-14 16:42:44] 2025-04-14 20:42:25,269 | INFO     | -- intersect: -27537031753.85836
[2025-04-14 16:42:44] 2025-04-14 20:42:25,269 | INFO     | intersect: -27537031753.85836
[2025-04-14 16:42:44] 2025-04-14 20:42:25,269 | INFO     | chi2: 6.875588294097881
[2025-04-14 16:42:44] 2025-04-14 20:42:25,270 | INFO     | sum of square deviations: 12622771756.83436
[2025-04-14 16:42:44] 2025-04-14 20:42:25,273 | INFO     | sum of deviations: 247048663491.47653
[2025-04-14 16:42:44] 2025-04-14 20:42:25,273 | INFO     | mean x: 1744652474.1540697
[2025-04-14 16:42:44] 2025-04-14 20:42:25,273 | INFO     | mean y: 2196303.802325581
[2025-04-14 16:42:44] 2025-04-14 20:42:25,273 | INFO     | -- intersect: -34143557917.21465
[2025-04-14 16:42:44] 2025-04-14 20:42:25,273 | INFO     | intersect: -34143557917.21465
[2025-04-14 16:42:44] 2025-04-14 20:42:25,274 | INFO     | chi2: 5.348302753003526
[2025-04-14 16:42:44] 2025-04-14 20:42:25,274 | INFO     | current chi2=5.348302753003526 (change=22.21316163455282 %)
[2025-04-14 16:42:44] 2025-04-14 20:42:25,274 | INFO     | right removable region: 343
[2025-04-14 16:42:44] 2025-04-14 20:42:25,274 | INFO     | sum of square deviations: 12622634506.83436
[2025-04-14 16:42:44] 2025-04-14 20:42:25,278 | INFO     | sum of deviations: 125386004518.54929
[2025-04-14 16:42:44] 2025-04-14 20:42:25,278 | INFO     | mean x: 1744652779.1540697
[2025-04-14 16:42:44] 2025-04-14 20:42:25,278 | INFO     | mean y: 2208283.8575581396
[2025-04-14 16:42:44] 2025-04-14 20:42:25,278 | INFO     | -- intersect: -17328170816.628136
[2025-04-14 16:42:44] 2025-04-14 20:42:25,279 | INFO     | intersect: -17328170816.628136
[2025-04-14 16:42:44] 2025-04-14 20:42:25,279 | INFO     | chi2: 4.121421059583593
[2025-04-14 16:42:44] 2025-04-14 20:42:25,279 | INFO     | current chi2=4.121421059583593 (change=40.05718662472142 %)
[2025-04-14 16:42:44] 2025-04-14 20:42:25,280 | INFO     | sum of square deviations: 12080118499.663778
[2025-04-14 16:42:44] 2025-04-14 20:42:25,282 | INFO     | sum of deviations: 74857479946.06195
[2025-04-14 16:42:44] 2025-04-14 20:42:25,283 | INFO     | mean x: 1744652931.6637168
[2025-04-14 16:42:44] 2025-04-14 20:42:25,283 | INFO     | mean y: 2222478.395280236
[2025-04-14 16:42:44] 2025-04-14 20:42:25,283 | INFO     | -- intersect: -10808956389.468458
[2025-04-14 16:42:44] 2025-04-14 20:42:25,283 | INFO     | intersect: -10808956389.468458
[2025-04-14 16:42:44] 2025-04-14 20:42:25,283 | INFO     | chi2: 3.2078494295393156
[2025-04-14 16:42:44] 2025-04-14 20:42:25,283 | INFO     | current chi2=3.2078494295393156 (change=22.166423105931813 %)
[2025-04-14 16:42:44] 2025-04-14 20:42:25,284 | INFO     | left removable region: 20
[2025-04-14 16:42:44] 2025-04-14 20:42:25,284 | INFO     | sum of square deviations: 10449064868.656376
[2025-04-14 16:42:44] 2025-04-14 20:42:25,291 | INFO     | sum of deviations: 43332227597.60064
[2025-04-14 16:42:44] 2025-04-14 20:42:25,291 | INFO     | mean x: 1744653053.6934984
[2025-04-14 16:42:44] 2025-04-14 20:42:25,291 | INFO     | mean y: 2255646.2383900927
[2025-04-14 16:42:44] 2025-04-14 20:42:25,291 | INFO     | -- intersect: -7232813151.953199
[2025-04-14 16:42:44] 2025-04-14 20:42:25,291 | INFO     | intersect: -7232813151.953199
[2025-04-14 16:42:44] 2025-04-14 20:42:25,292 | INFO     | chi2: 0.6466226165954297
[2025-04-14 16:42:44] 2025-04-14 20:42:25,294 | INFO     | -- intersect: -7232813151.953199
[2025-04-14 16:42:44] 2025-04-14 20:42:25,294 | INFO     | current memory leak: 4.15 B/s (using 323 data points, chi2=0.65)
[2025-04-14 16:42:44] 2025-04-14 20:42:25,295 | INFO     | ..............................
[2025-04-14 16:42:44] 2025-04-14 20:42:25,295 | INFO     | . Timing measurements:
[2025-04-14 16:42:44] 2025-04-14 20:42:25,296 | INFO     | . get job = 1 s
[2025-04-14 16:42:44] 2025-04-14 20:42:25,296 | INFO     | . initial setup = 13 s
[2025-04-14 16:42:44] 2025-04-14 20:42:25,296 | INFO     | . payload setup = 53 s
[2025-04-14 16:42:44] 2025-04-14 20:42:25,296 | INFO     | . stage-in = 0 s
[2025-04-14 16:42:44] 2025-04-14 20:42:25,296 | INFO     | . payload execution = 21321 s
[2025-04-14 16:42:44] 2025-04-14 20:42:25,296 | INFO     | . stage-out = 4 s
[2025-04-14 16:42:44] 2025-04-14 20:42:25,296 | INFO     | . log creation = 0 s
[2025-04-14 16:42:44] 2025-04-14 20:42:25,296 | INFO     | ..............................
[2025-04-14 16:42:44] 2025-04-14 20:42:25,602 | INFO     | 
[2025-04-14 16:42:44] 2025-04-14 20:42:25,602 | INFO     | job summary report
[2025-04-14 16:42:44] 2025-04-14 20:42:25,603 | INFO     | --------------------------------------------------
[2025-04-14 16:42:44] 2025-04-14 20:42:25,603 | INFO     | PanDA job id: 6602105207
[2025-04-14 16:42:44] 2025-04-14 20:42:25,603 | INFO     | task id: 44075483
[2025-04-14 16:42:44] 2025-04-14 20:42:25,603 | INFO     | errors: (none)
[2025-04-14 16:42:44] 2025-04-14 20:42:25,603 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-14 16:42:44] 2025-04-14 20:42:25,603 | INFO     | pilot state: finished 
[2025-04-14 16:42:44] 2025-04-14 20:42:25,603 | INFO     | transexitcode: 0
[2025-04-14 16:42:44] 2025-04-14 20:42:25,603 | INFO     | exeerrorcode: 0
[2025-04-14 16:42:44] 2025-04-14 20:42:25,603 | INFO     | exeerrordiag: 
[2025-04-14 16:42:44] 2025-04-14 20:42:25,603 | INFO     | exitcode: 0
[2025-04-14 16:42:44] 2025-04-14 20:42:25,603 | INFO     | exitmsg: OK
[2025-04-14 16:42:44] 2025-04-14 20:42:25,603 | INFO     | cpuconsumptiontime: 45087 s
[2025-04-14 16:42:44] 2025-04-14 20:42:25,603 | INFO     | nevents: 400
[2025-04-14 16:42:44] 2025-04-14 20:42:25,603 | INFO     | neventsw: 0
[2025-04-14 16:42:44] 2025-04-14 20:42:25,604 | INFO     | pid: 4143591
[2025-04-14 16:42:44] 2025-04-14 20:42:25,604 | INFO     | pgrp: 4143591
[2025-04-14 16:42:44] 2025-04-14 20:42:25,604 | INFO     | corecount: 9
[2025-04-14 16:42:44] 2025-04-14 20:42:25,604 | INFO     | event service: False
[2025-04-14 16:42:44] 2025-04-14 20:42:25,604 | INFO     | sizes: {0: 2416529, 1: 2417214, 2: 2417413, 14: 2417413, 25: 2417441, 36: 2417469, 38: 2417831, 47: 2417859, 21379: 2451095, 21384: 2460036, 21385: 2460092, 21421:
[2025-04-14 16:42:44] 2025-04-14 20:42:25,604 | INFO     | --------------------------------------------------
[2025-04-14 16:42:44] 2025-04-14 20:42:25,604 | INFO     | 
[2025-04-14 16:42:44] 2025-04-14 20:42:25,604 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-04-14 16:42:44] 2025-04-14 20:42:25,723 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-14 16:42:44] 2025-04-14 20:42:25,723 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-14 16:42:44] 2025-04-14 20:42:25,723 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-14 16:42:44] 2025-04-14 20:42:25,723 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-14 16:42:44] 2025-04-14 20:42:25,723 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-14 16:42:44] 2025-04-14 20:42:25,723 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-14 16:42:44] 2025-04-14 20:42:25,723 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-14 16:42:44] 2025-04-14 20:42:25,724 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-14 16:42:44] 2025-04-14 20:42:25,724 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-14 16:42:44] 2025-04-14 20:42:25,724 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-14 16:42:44] 2025-04-14 20:42:25,724 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-14 16:42:44] 2025-04-14 20:42:25,724 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-14 16:42:44] 2025-04-14 20:42:25,724 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-14 16:42:44] 2025-04-14 20:42:25,724 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-14 16:42:44] 2025-04-14 20:42:25,724 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-14 16:42:44] 2025-04-14 20:42:25,724 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-14 16:42:44] 2025-04-14 20:42:25,724 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-14 16:42:44] 2025-04-14 20:42:25,724 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-14 16:42:44] 2025-04-14 20:42:25,724 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-14 16:42:44] 2025-04-14 20:42:25,725 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-14 16:42:44] 2025-04-14 20:42:25,725 | INFO     | job 6602105207 has completed (purged errors)
[2025-04-14 16:42:44] 2025-04-14 20:42:25,725 | INFO     | overall cleanup function is called
[2025-04-14 16:42:44] 2025-04-14 20:42:26,761 | INFO     | --- collectZombieJob: --- 10, [4143591]
[2025-04-14 16:42:44] 2025-04-14 20:42:26,761 | INFO     | zombie collector waiting for pid 4143591
[2025-04-14 16:42:44] 2025-04-14 20:42:26,762 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-14 16:42:44] 2025-04-14 20:42:26,762 | INFO     | collected zombie processes
[2025-04-14 16:42:44] 2025-04-14 20:42:26,762 | INFO     | will attempt to kill all subprocesses of pid=4143591
[2025-04-14 16:42:44] 2025-04-14 20:42:27,576 | INFO     | process IDs to be killed: [4143591] (in reverse order)
[2025-04-14 16:42:44] 2025-04-14 20:42:28,023 | WARNING  | found no corresponding commands to process id(s)
[2025-04-14 16:42:44] 2025-04-14 20:42:28,024 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-14 16:42:44] 2025-04-14 20:42:28,051 | INFO     | did not find any defunct processes belonging to 4143591
[2025-04-14 16:42:44] 2025-04-14 20:42:28,076 | INFO     | did not find any defunct processes belonging to 4143591
[2025-04-14 16:42:44] 2025-04-14 20:42:28,076 | INFO     | ready for new job
[2025-04-14 16:42:44] 2025-04-14 20:42:28,076 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-14 16:42:44] 2025-04-14 20:42:28,082 | INFO     | **************************************
[2025-04-14 16:42:44] 2025-04-14 20:42:28,083 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-14 16:42:44] 2025-04-14 20:42:28,083 | INFO     | **************************************
[2025-04-14 16:42:44] 2025-04-14 20:42:28,083 | INFO     | 
[2025-04-14 16:42:44] 2025-04-14 20:42:28,104 | INFO     | architecture information:
[2025-04-14 16:42:44] 2025-04-14 20:42:28,105 | INFO     | executing command: cat /etc/os-release
[2025-04-14 16:42:44] 2025-04-14 20:42:28,191 | INFO     | cat /etc/os-release:
[2025-04-14 16:42:44] NAME="CentOS Linux"
[2025-04-14 16:42:44] VERSION="7 (Core)"
[2025-04-14 16:42:44] ID="centos"
[2025-04-14 16:42:44] ID_LIKE="rhel fedora"
[2025-04-14 16:42:44] VERSION_ID="7"
[2025-04-14 16:42:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-14 16:42:44] ANSI_COLOR="0;31"
[2025-04-14 16:42:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-14 16:42:44] HOME_URL="https://www.centos.org/"
[2025-04-14 16:42:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-14 16:42:44] 
[2025-04-14 16:42:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-14 16:42:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-14 16:42:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-14 16:42:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-14 16:42:44] 
[2025-04-14 16:42:44] 2025-04-14 20:42:28,192 | INFO     | **************************************
[2025-04-14 16:42:44] 2025-04-14 20:42:28,696 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-04-14 16:42:44] 2025-04-14 20:42:28,749 | INFO     | sufficient remaining disk space (74644979712 B)
[2025-04-14 16:42:44] 2025-04-14 20:42:28,749 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-14 16:42:44] 2025-04-14 20:42:28,749 | INFO     | current server update state: UPDATING_FINAL
[2025-04-14 16:42:44] 2025-04-14 20:42:28,749 | INFO     | update_server=False
[2025-04-14 16:42:44] 2025-04-14 20:42:28,749 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-14 16:42:44] 2025-04-14 20:42:28,750 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-14 16:42:44] 2025-04-14 20:42:28,750 | INFO     | aborting loop
[2025-04-14 16:42:44] 2025-04-14 20:42:28,754 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-14 16:42:44] 2025-04-14 20:42:28,755 | INFO     | found 0 job(s) in 20 queues
[2025-04-14 16:42:44] 2025-04-14 20:42:28,755 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-14 16:42:44] 2025-04-14 20:42:28,755 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-14 16:42:44] 2025-04-14 20:42:28,841 | INFO     | all data control threads have been joined
[2025-04-14 16:42:44] 2025-04-14 20:42:29,477 | INFO     | all job control threads have been joined
[2025-04-14 16:42:44] 2025-04-14 20:42:29,613 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-14 16:42:44] 2025-04-14 20:42:29,637 | INFO     | all payload control threads have been joined
[2025-04-14 16:42:44] 2025-04-14 20:42:29,755 | INFO     | [job] retrieve thread has finished
[2025-04-14 16:42:44] 2025-04-14 20:42:29,756 | INFO     | [job] job monitor thread has finished
[2025-04-14 16:42:44] 2025-04-14 20:42:29,847 | INFO     | [data] control thread has finished
[2025-04-14 16:42:44] 2025-04-14 20:42:30,094 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-14 16:42:44] 2025-04-14 20:42:30,095 | INFO     | [job] create_data_payload thread has finished
[2025-04-14 16:42:44] 2025-04-14 20:42:30,100 | INFO     | [payload] validate_pre thread has finished
[2025-04-14 16:42:44] 2025-04-14 20:42:30,215 | INFO     | [job] validate thread has finished
[2025-04-14 16:42:44] 2025-04-14 20:42:30,223 | INFO     | [data] copytool_in thread has finished
[2025-04-14 16:42:44] 2025-04-14 20:42:30,231 | INFO     | [payload] execute_payloads thread has finished
[2025-04-14 16:42:44] 2025-04-14 20:42:30,342 | INFO     | [payload] failed_post thread has finished
[2025-04-14 16:42:44] 2025-04-14 20:42:30,358 | INFO     | [payload] validate_post thread has finished
[2025-04-14 16:42:44] 2025-04-14 20:42:30,483 | INFO     | [job] control thread has finished
[2025-04-14 16:42:44] 2025-04-14 20:42:30,608 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-14 16:42:44] 2025-04-14 20:42:30,643 | INFO     | [payload] control thread has finished
[2025-04-14 16:42:44] 2025-04-14 20:42:31,614 | INFO     | [job] queue monitor thread has finished
[2025-04-14 16:42:44] 2025-04-14 20:42:31,621 | INFO     | [data] copytool_out thread has finished
[2025-04-14 16:42:44] 2025-04-14 20:42:31,907 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-14 16:42:44] 2025-04-14 20:42:35,916 | INFO     | [data] queue_monitor thread has finished
[2025-04-14 16:42:44] 2025-04-14 20:42:35,923 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140175823763264)>', '<ExcThread(monitor, started 140174956676864)>']
[2025-04-14 16:42:44] 2025-04-14 20:42:36,813 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-14 16:42:44] 2025-04-14 20:42:36,814 | INFO     | [monitor] control thread has ended
[2025-04-14 16:42:44] 2025-04-14 20:42:40,949 | INFO     | all workflow threads have been joined
[2025-04-14 16:42:44] 2025-04-14 20:42:40,951 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-14 16:42:44] 2025-04-14 20:42:40,951 | INFO     | traces error code: 0
[2025-04-14 16:42:44] 2025-04-14 20:42:40,951 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-14 16:42:44] 2025-04-14 20:42:42,072 [wrapper] ==== pilot stdout END ====
[2025-04-14 16:42:44] 2025-04-14 20:42:42,137 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-14 16:42:44] 2025-04-14 20:42:42,187 [wrapper] pilotpid: 4131217
[2025-04-14 16:42:44] 2025-04-14 20:42:42,204 [wrapper] Pilot exit status: 0
[2025-04-14 16:42:44] 2025-04-14 20:42:42,315 [wrapper] pandaids: 6602105207
[2025-04-14 16:42:44] 2025-04-14 20:42:43,987 [wrapper] cleanup supervisor_pilot  974192 4131218
[2025-04-14 16:42:44] 2025-04-14 20:42:44,000 [wrapper] Test setup, not cleaning
[2025-04-14 16:42:44] 2025-04-14 20:42:44,016 [wrapper] apfmon messages muted
[2025-04-14 16:42:44] 2025-04-14 20:42:44,034 [wrapper] ==== wrapper stdout END ====
[2025-04-14 16:42:44] 2025-04-14 20:42:44,051 [wrapper] ==== wrapper stderr END ====
[2025-04-14 16:42:44]  *** Error codes and diagnostics ***
[2025-04-14 16:42:44]     "exeErrorCode": 0,
[2025-04-14 16:42:44]     "exeErrorDiag": "",
[2025-04-14 16:42:44]     "pilotErrorCode": 0,
[2025-04-14 16:42:44]     "pilotErrorDiag": "",
[2025-04-14 16:42:44]  *** Listing of results directory ***
[2025-04-14 16:42:44] total 417484
[2025-04-14 16:42:44] -rw-r--r--. 1 boincer umatlas    495897 Apr 13 18:50 pilot3.tar.gz
[2025-04-14 16:42:44] -rwx------. 1 boincer umatlas     37140 Apr 13 19:16 runpilot2-wrapper.sh
[2025-04-14 16:42:44] -rw-r--r--. 1 boincer umatlas      5111 Apr 13 19:16 queuedata.json
[2025-04-14 16:42:44] -rw-r--r--. 1 boincer umatlas       100 Apr 14 10:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-14 16:42:44] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 14 10:42 run_atlas
[2025-04-14 16:42:44] -rw-r--r--. 1 boincer umatlas       105 Apr 14 10:42 job.xml
[2025-04-14 16:42:44] -rw-r--r--. 2 boincer umatlas 223419586 Apr 14 10:42 EVNT.44075481._000401.pool.root.1
[2025-04-14 16:42:44] -rw-r--r--. 2 boincer umatlas    508888 Apr 14 10:42 input.tar.gz
[2025-04-14 16:42:44] -rw-r--r--. 2 boincer umatlas     17569 Apr 14 10:42 start_atlas.sh
[2025-04-14 16:42:44] drwxrwx--x. 2 boincer umatlas      4096 Apr 14 10:42 shared
[2025-04-14 16:42:44] -rw-r--r--. 1 boincer umatlas         0 Apr 14 10:42 boinc_lockfile
[2025-04-14 16:42:44] -rw-r--r--. 1 boincer umatlas      2574 Apr 14 10:42 pandaJob.out
[2025-04-14 16:42:44] -rw-------. 1 boincer umatlas       467 Apr 14 10:42 setup.sh.local
[2025-04-14 16:42:44] -rw-------. 1 boincer umatlas    986111 Apr 14 10:43 agis_schedconf.cvmfs.json
[2025-04-14 16:42:44] drwx------. 4 boincer umatlas      4096 Apr 14 10:44 pilot3
[2025-04-14 16:42:44] -rw-------. 1 boincer umatlas 195961258 Apr 14 16:38 HITS.44075483._010213.pool.root.1
[2025-04-14 16:42:44] -rw-r--r--. 1 boincer umatlas       531 Apr 14 16:39 boinc_task_state.xml
[2025-04-14 16:42:44] -rw-r--r--. 1 boincer umatlas      6839 Apr 14 16:40 init_data.xml
[2025-04-14 16:42:44] -rw-------. 1 boincer umatlas      1050 Apr 14 16:41 memory_monitor_summary.json
[2025-04-14 16:42:44] -rw-------. 1 boincer umatlas   1603529 Apr 14 16:41 agis_ddmendpoints.agis.ALL.json
[2025-04-14 16:42:44] -rw-------. 1 boincer umatlas    447878 Apr 14 16:41 log.44075483._010213.job.log.tgz.1
[2025-04-14 16:42:44] -rw-------. 1 boincer umatlas        95 Apr 14 16:42 pilot_heartbeat.json
[2025-04-14 16:42:44] -rw-------. 1 boincer umatlas      7736 Apr 14 16:42 heartbeat.json
[2025-04-14 16:42:44] -rw-------. 1 boincer umatlas      4476 Apr 14 16:42 pilotlog.txt
[2025-04-14 16:42:44] -rw-r--r--. 1 boincer umatlas        28 Apr 14 16:42 wrapper_checkpoint.txt
[2025-04-14 16:42:44] -rw-r--r--. 1 boincer umatlas      8192 Apr 14 16:42 boinc_mmap_file
[2025-04-14 16:42:44] -rw-------. 1 boincer umatlas   1688994 Apr 14 16:42 log.44075483._010213.job.log.1
[2025-04-14 16:42:44] -rw-------. 1 boincer umatlas       357 Apr 14 16:42 output.list
[2025-04-14 16:42:44] -rw-r--r--. 1 boincer umatlas       620 Apr 14 16:42 runtime_log
[2025-04-14 16:42:44] -rw-------. 1 boincer umatlas   2160640 Apr 14 16:42 result.tar.gz
[2025-04-14 16:42:44] -rw-r--r--. 1 boincer umatlas     11424 Apr 14 16:42 runtime_log.err
[2025-04-14 16:42:44] -rw-------. 1 boincer umatlas       660 Apr 14 16:42 KXYNDmYkLO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmDzULDm38Wvkm.diag
[2025-04-14 16:42:44] -rw-r--r--. 1 boincer umatlas     21306 Apr 14 16:42 stderr.txt
[2025-04-14 16:42:45] HITS file was successfully produced:
[2025-04-14 16:42:45] -rw-------. 1 boincer umatlas 195961258 Apr 14 16:38 shared/HITS.pool.root.1
[2025-04-14 16:42:45]  *** Contents of shared directory: ***
[2025-04-14 16:42:45] total 412192
[2025-04-14 16:42:45] -rw-r--r--. 2 boincer umatlas 223419586 Apr 14 10:42 ATLAS.root_0
[2025-04-14 16:42:45] -rw-r--r--. 2 boincer umatlas    508888 Apr 14 10:42 input.tar.gz
[2025-04-14 16:42:45] -rw-r--r--. 2 boincer umatlas     17569 Apr 14 10:42 start_atlas.sh
[2025-04-14 16:42:45] -rw-------. 1 boincer umatlas 195961258 Apr 14 16:38 HITS.pool.root.1
[2025-04-14 16:42:45] -rw-------. 1 boincer umatlas   2160640 Apr 14 16:42 result.tar.gz
16:43:07 (4126575): run_atlas exited; CPU time 45758.357585
16:43:07 (4126575): called boinc_finish(0)

</stderr_txt>
]]>

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