Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:39:06 (43742): wrapper (7.7.26015): starting
07:39:06 (43742): wrapper: running run_atlas (--nthreads 10)
[2025-04-14 07:39:06] Arguments: --nthreads 10
[2025-04-14 07:39:06] Threads: 10
[2025-04-14 07:39:06] Checking for CVMFS
[2025-04-14 07:39:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-14 07:39:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-14 07:39:08] Running cvmfs_config stat atlas.cern.ch
[2025-04-14 07:39:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-14 07:39:10] 2.11.2.0 9974 35446 349636 144848 0 376 10458204 18432000 11840 130560 0 102877228 98.850 283475708 36910 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-14 07:39:10] CVMFS is ok
[2025-04-14 07:39:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-14 07:39:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-14 07:39:10] Further information can be found at the LHC@home message board.
[2025-04-14 07:39:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-14 07:39:10] Checking for apptainer binary...
[2025-04-14 07:39:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-14 07:39:10] Running /usr/bin/apptainer --version
[2025-04-14 07:39:11] apptainer version 1.3.2-1.el7
[2025-04-14 07:39:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-14 07:39:46] c-211-19.aglt2.org
[2025-04-14 07:39:46] apptainer works
[2025-04-14 07:39:46] Set ATHENA_PROC_NUMBER=10
[2025-04-14 07:39:46] Set ATHENA_CORE_NUMBER=10
[2025-04-14 07:39:47] Starting ATLAS job with PandaID=6602114689
[2025-04-14 07:39:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-15 19:55:01]  *** The last 200 lines of the pilot log: ***
[2025-04-15 19:55:02] 2025-04-15 23:54:19,042 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-15 19:55:02] 2025-04-15 23:54:19,848 | INFO     | fitting pss+swap vs Time
[2025-04-15 19:55:02] 2025-04-15 23:54:19,880 | INFO     | sum of square deviations: 2992328637957.737
[2025-04-15 19:55:02] 2025-04-15 23:54:20,589 | INFO     | monitor loop #5160: job 0:6602114689 is in state 'finished'
[2025-04-15 19:55:02] 2025-04-15 23:54:20,593 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 19:55:02] 2025-04-15 23:54:21,497 | INFO     | sum of deviations: 4978699143602.738
[2025-04-15 19:55:02] 2025-04-15 23:54:21,497 | INFO     | mean x: 1744696218.5880694
[2025-04-15 19:55:02] 2025-04-15 23:54:21,497 | INFO     | mean y: 2530456.398778769
[2025-04-15 19:55:02] 2025-04-15 23:54:21,498 | INFO     | -- intersect: -2900331702.2375684
[2025-04-15 19:55:02] 2025-04-15 23:54:21,498 | INFO     | intersect: -2900331702.2375684
[2025-04-15 19:55:02] 2025-04-15 23:54:21,578 | INFO     | chi2: 17.491516146185226
[2025-04-15 19:55:02] 2025-04-15 23:54:21,623 | INFO     | sum of square deviations: 2971296568422.276
[2025-04-15 19:55:02] 2025-04-15 23:54:21,883 | INFO     | sum of deviations: 5265412232675.4795
[2025-04-15 19:55:02] 2025-04-15 23:54:21,883 | INFO     | mean x: 1744696066.0913372
[2025-04-15 19:55:02] 2025-04-15 23:54:21,883 | INFO     | mean y: 2532532.1676082863
[2025-04-15 19:55:02] 2025-04-15 23:54:21,883 | INFO     | -- intersect: -3089230204.11693
[2025-04-15 19:55:02] 2025-04-15 23:54:21,884 | INFO     | intersect: -3089230204.11693
[2025-04-15 19:55:02] 2025-04-15 23:54:21,887 | INFO     | chi2: 15.879371807051083
[2025-04-15 19:55:02] 2025-04-15 23:54:21,887 | INFO     | current chi2=15.879371807051083 (change=9.216721556099875 %)
[2025-04-15 19:55:02] 2025-04-15 23:54:21,887 | INFO     | right removable region: 2123
[2025-04-15 19:55:02] 2025-04-15 23:54:21,890 | INFO     | sum of square deviations: 2971294635635.092
[2025-04-15 19:55:02] 2025-04-15 23:54:22,038 | INFO     | sum of deviations: 4187279695468.816
[2025-04-15 19:55:02] 2025-04-15 23:54:22,038 | INFO     | mean x: 1744696371.0918078
[2025-04-15 19:55:02] 2025-04-15 23:54:22,038 | INFO     | mean y: 2536194.190677966
[2025-04-15 19:55:02] 2025-04-15 23:54:22,038 | INFO     | -- intersect: -2456167026.221979
[2025-04-15 19:55:02] 2025-04-15 23:54:22,039 | INFO     | intersect: -2456167026.221979
[2025-04-15 19:55:02] 2025-04-15 23:54:22,041 | INFO     | chi2: 12.658976014357973
[2025-04-15 19:55:02] 2025-04-15 23:54:22,042 | INFO     | current chi2=12.658976014357973 (change=27.62790881841992 %)
[2025-04-15 19:55:02] 2025-04-15 23:54:22,045 | INFO     | sum of square deviations: 2950359425862.399
[2025-04-15 19:55:02] 2025-04-15 23:54:22,976 | INFO     | sum of deviations: 3517612693465.464
[2025-04-15 19:55:02] 2025-04-15 23:54:22,995 | INFO     | mean x: 1744696523.595564
[2025-04-15 19:55:02] 2025-04-15 23:54:22,995 | INFO     | mean y: 2541072.049551675
[2025-04-15 19:55:02] 2025-04-15 23:54:22,996 | INFO     | -- intersect: -2077600955.3411994
[2025-04-15 19:55:02] 2025-04-15 23:54:22,996 | INFO     | intersect: -2077600955.3411994
[2025-04-15 19:55:02] 2025-04-15 23:54:22,999 | INFO     | chi2: 9.261481234420728
[2025-04-15 19:55:02] 2025-04-15 23:54:23,000 | INFO     | current chi2=9.261481234420728 (change=26.838622461119787 %)
[2025-04-15 19:55:02] 2025-04-15 23:54:23,003 | INFO     | sum of square deviations: 2929523163854.7314
[2025-04-15 19:55:02] 2025-04-15 23:54:23,206 | INFO     | monitor loop #5161: job 0:6602114689 is in state 'finished'
[2025-04-15 19:55:02] 2025-04-15 23:54:23,207 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 19:55:02] 2025-04-15 23:54:24,515 | INFO     | sum of deviations: 2981328350042.593
[2025-04-15 19:55:02] 2025-04-15 23:54:24,516 | INFO     | mean x: 1744696676.0979187
[2025-04-15 19:55:02] 2025-04-15 23:54:24,516 | INFO     | mean y: 2544997.0212866603
[2025-04-15 19:55:02] 2025-04-15 23:54:24,552 | INFO     | -- intersect: -1773004596.4598372
[2025-04-15 19:55:02] 2025-04-15 23:54:24,552 | INFO     | intersect: -1773004596.4598372
[2025-04-15 19:55:02] 2025-04-15 23:54:24,579 | INFO     | chi2: 7.129703311178711
[2025-04-15 19:55:02] 2025-04-15 23:54:24,607 | INFO     | current chi2=7.129703311178711 (change=23.01767794247819 %)
[2025-04-15 19:55:02] 2025-04-15 23:54:24,607 | INFO     | left removable region: 30
[2025-04-15 19:55:02] 2025-04-15 23:54:24,635 | INFO     | sum of square deviations: 2843084021224.739
[2025-04-15 19:55:02] 2025-04-15 23:54:25,455 | INFO     | sum of deviations: 2045165276101.8772
[2025-04-15 19:55:02] 2025-04-15 23:54:25,469 | INFO     | mean x: 1744696950.608218
[2025-04-15 19:55:02] 2025-04-15 23:54:25,469 | INFO     | mean y: 2556190.007166746
[2025-04-15 19:55:02] 2025-04-15 23:54:25,469 | INFO     | -- intersect: -1252487134.0967965
[2025-04-15 19:55:02] 2025-04-15 23:54:25,470 | INFO     | intersect: -1252487134.0967965
[2025-04-15 19:55:02] 2025-04-15 23:54:25,500 | INFO     | chi2: 1.718733995820056
[2025-04-15 19:55:02] 2025-04-15 23:54:25,500 | INFO     | -- intersect: -1252487134.0967965
[2025-04-15 19:55:02] 2025-04-15 23:54:25,500 | INFO     | current memory leak: 0.72 B/s (using 2093 data points, chi2=1.72)
[2025-04-15 19:55:02] 2025-04-15 23:54:25,557 | INFO     | ..............................
[2025-04-15 19:55:02] 2025-04-15 23:54:25,558 | INFO     | . Timing measurements:
[2025-04-15 19:55:02] 2025-04-15 23:54:25,558 | INFO     | . get job = 1 s
[2025-04-15 19:55:02] 2025-04-15 23:54:25,558 | INFO     | . initial setup = 13 s
[2025-04-15 19:55:02] 2025-04-15 23:54:25,558 | INFO     | . payload setup = 114 s
[2025-04-15 19:55:02] 2025-04-15 23:54:25,558 | INFO     | . stage-in = 0 s
[2025-04-15 19:55:02] 2025-04-15 23:54:25,558 | INFO     | . payload execution = 129971 s
[2025-04-15 19:55:02] 2025-04-15 23:54:25,559 | INFO     | . stage-out = 19 s
[2025-04-15 19:55:02] 2025-04-15 23:54:25,559 | INFO     | . log creation = 5 s
[2025-04-15 19:55:02] 2025-04-15 23:54:25,559 | INFO     | ..............................
[2025-04-15 19:55:02] 2025-04-15 23:54:27,984 | INFO     | 
[2025-04-15 19:55:02] 2025-04-15 23:54:27,985 | INFO     | job summary report
[2025-04-15 19:55:02] 2025-04-15 23:54:27,985 | INFO     | --------------------------------------------------
[2025-04-15 19:55:02] 2025-04-15 23:54:27,985 | INFO     | PanDA job id: 6602114689
[2025-04-15 19:55:02] 2025-04-15 23:54:27,985 | INFO     | task id: 44075483
[2025-04-15 19:55:02] 2025-04-15 23:54:27,998 | INFO     | errors: (none)
[2025-04-15 19:55:02] 2025-04-15 23:54:27,999 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-15 19:55:02] 2025-04-15 23:54:27,999 | INFO     | pilot state: finished 
[2025-04-15 19:55:02] 2025-04-15 23:54:27,999 | INFO     | transexitcode: 0
[2025-04-15 19:55:02] 2025-04-15 23:54:27,999 | INFO     | exeerrorcode: 0
[2025-04-15 19:55:02] 2025-04-15 23:54:28,011 | INFO     | exeerrordiag: 
[2025-04-15 19:55:02] 2025-04-15 23:54:28,012 | INFO     | exitcode: 0
[2025-04-15 19:55:02] 2025-04-15 23:54:28,012 | INFO     | exitmsg: OK
[2025-04-15 19:55:02] 2025-04-15 23:54:28,012 | INFO     | cpuconsumptiontime: 95651 s
[2025-04-15 19:55:02] 2025-04-15 23:54:28,012 | INFO     | nevents: 400
[2025-04-15 19:55:02] 2025-04-15 23:54:28,012 | INFO     | neventsw: 0
[2025-04-15 19:55:02] 2025-04-15 23:54:28,026 | INFO     | pid: 6035
[2025-04-15 19:55:02] 2025-04-15 23:54:28,026 | INFO     | pgrp: 6035
[2025-04-15 19:55:02] 2025-04-15 23:54:28,026 | INFO     | corecount: 10
[2025-04-15 19:55:02] 2025-04-15 23:54:28,026 | INFO     | event service: False
[2025-04-15 19:55:02] 2025-04-15 23:54:28,026 | INFO     | sizes: {0: 2416535, 2: 2417220, 3: 2417220, 4: 2417447, 5: 2417447, 16: 2417503, 28: 2417659, 39: 2417687, 50: 2417715, 62: 2417743, 63: 2417977, 73: 2418285, 1300
[2025-04-15 19:55:02] 2025-04-15 23:54:28,040 | INFO     | --------------------------------------------------
[2025-04-15 19:55:02] 2025-04-15 23:54:28,040 | INFO     | 
[2025-04-15 19:55:02] 2025-04-15 23:54:28,040 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-15 19:55:02] 2025-04-15 23:54:28,600 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-15 19:55:02] 2025-04-15 23:54:28,601 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-15 19:55:02] 2025-04-15 23:54:28,601 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-15 19:55:02] 2025-04-15 23:54:28,601 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-15 19:55:02] 2025-04-15 23:54:28,601 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-15 19:55:02] 2025-04-15 23:54:28,601 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-15 19:55:02] 2025-04-15 23:54:28,602 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-15 19:55:02] 2025-04-15 23:54:28,602 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-15 19:55:02] 2025-04-15 23:54:28,602 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-15 19:55:02] 2025-04-15 23:54:28,602 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-15 19:55:02] 2025-04-15 23:54:28,605 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-15 19:55:02] 2025-04-15 23:54:28,606 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-15 19:55:02] 2025-04-15 23:54:28,606 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-15 19:55:02] 2025-04-15 23:54:28,606 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-15 19:55:02] 2025-04-15 23:54:28,606 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-15 19:55:02] 2025-04-15 23:54:28,606 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-15 19:55:02] 2025-04-15 23:54:28,607 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-15 19:55:02] 2025-04-15 23:54:28,607 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-15 19:55:02] 2025-04-15 23:54:28,607 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-15 19:55:02] 2025-04-15 23:54:28,607 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-15 19:55:02] 2025-04-15 23:54:28,607 | INFO     | job 6602114689 has completed (purged errors)
[2025-04-15 19:55:02] 2025-04-15 23:54:28,608 | INFO     | overall cleanup function is called
[2025-04-15 19:55:02] 2025-04-15 23:54:29,631 | INFO     | --- collectZombieJob: --- 10, [6035]
[2025-04-15 19:55:02] 2025-04-15 23:54:29,632 | INFO     | zombie collector waiting for pid 6035
[2025-04-15 19:55:02] 2025-04-15 23:54:29,632 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-15 19:55:02] 2025-04-15 23:54:29,632 | INFO     | collected zombie processes
[2025-04-15 19:55:02] 2025-04-15 23:54:29,632 | INFO     | will attempt to kill all subprocesses of pid=6035
[2025-04-15 19:55:02] 2025-04-15 23:54:35,177 | INFO     | PID=23775 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-15 19:55:02] 2025-04-15 23:54:35,178 | INFO     | .. there are 41 such processes running
[2025-04-15 19:55:02] 2025-04-15 23:54:35,337 | INFO     | process IDs to be killed: [6035] (in reverse order)
[2025-04-15 19:55:02] 2025-04-15 23:54:35,566 | WARNING  | found no corresponding commands to process id(s)
[2025-04-15 19:55:02] 2025-04-15 23:54:35,566 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-15 19:55:02] 2025-04-15 23:54:35,601 | INFO     | did not find any defunct processes belonging to 6035
[2025-04-15 19:55:02] 2025-04-15 23:54:35,626 | INFO     | did not find any defunct processes belonging to 6035
[2025-04-15 19:55:02] 2025-04-15 23:54:35,627 | INFO     | ready for new job
[2025-04-15 19:55:02] 2025-04-15 23:54:35,627 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-15 19:55:02] 2025-04-15 23:54:35,634 | INFO     | **************************************
[2025-04-15 19:55:02] 2025-04-15 23:54:35,635 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-15 19:55:02] 2025-04-15 23:54:35,635 | INFO     | **************************************
[2025-04-15 19:55:02] 2025-04-15 23:54:35,635 | INFO     | 
[2025-04-15 19:55:02] 2025-04-15 23:54:35,638 | INFO     | architecture information:
[2025-04-15 19:55:02] 2025-04-15 23:54:35,641 | INFO     | executing command: cat /etc/os-release
[2025-04-15 19:55:02] 2025-04-15 23:54:35,740 | INFO     | cat /etc/os-release:
[2025-04-15 19:55:02] NAME="CentOS Linux"
[2025-04-15 19:55:02] VERSION="7 (Core)"
[2025-04-15 19:55:02] ID="centos"
[2025-04-15 19:55:02] ID_LIKE="rhel fedora"
[2025-04-15 19:55:02] VERSION_ID="7"
[2025-04-15 19:55:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-15 19:55:02] ANSI_COLOR="0;31"
[2025-04-15 19:55:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-15 19:55:02] HOME_URL="https://www.centos.org/"
[2025-04-15 19:55:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-15 19:55:02] 
[2025-04-15 19:55:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-15 19:55:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-15 19:55:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-15 19:55:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-15 19:55:02] 
[2025-04-15 19:55:02] 2025-04-15 23:54:35,740 | INFO     | **************************************
[2025-04-15 19:55:02] 2025-04-15 23:54:36,243 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-15 19:55:02] 2025-04-15 23:54:36,459 | INFO     | sufficient remaining disk space (56924045312 B)
[2025-04-15 19:55:02] 2025-04-15 23:54:36,460 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-15 19:55:02] 2025-04-15 23:54:36,460 | INFO     | current server update state: UPDATING_FINAL
[2025-04-15 19:55:02] 2025-04-15 23:54:36,460 | INFO     | update_server=False
[2025-04-15 19:55:02] 2025-04-15 23:54:36,473 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-15 19:55:02] 2025-04-15 23:54:36,473 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-15 19:55:02] 2025-04-15 23:54:36,832 | INFO     | all data control threads have been joined
[2025-04-15 19:55:02] 2025-04-15 23:54:37,094 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-15 19:55:02] 2025-04-15 23:54:37,110 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-15 19:55:02] 2025-04-15 23:54:37,111 | INFO     | aborting loop
[2025-04-15 19:55:02] 2025-04-15 23:54:37,135 | INFO     | all job control threads have been joined
[2025-04-15 19:55:02] 2025-04-15 23:54:37,187 | INFO     | found 0 job(s) in 20 queues
[2025-04-15 19:55:02] 2025-04-15 23:54:37,187 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-15 19:55:02] 2025-04-15 23:54:37,187 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-15 19:55:02] 2025-04-15 23:54:37,318 | INFO     | all payload control threads have been joined
[2025-04-15 19:55:02] 2025-04-15 23:54:37,479 | INFO     | [job] retrieve thread has finished
[2025-04-15 19:55:02] 2025-04-15 23:54:37,605 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-15 19:55:02] 2025-04-15 23:54:37,839 | INFO     | [data] control thread has finished
[2025-04-15 19:55:02] 2025-04-15 23:54:38,098 | INFO     | [job] create_data_payload thread has finished
[2025-04-15 19:55:02] 2025-04-15 23:54:38,100 | INFO     | [job] queue monitor thread has finished
[2025-04-15 19:55:02] 2025-04-15 23:54:38,102 | INFO     | [payload] execute_payloads thread has finished
[2025-04-15 19:55:02] 2025-04-15 23:54:38,108 | INFO     | [data] copytool_in thread has finished
[2025-04-15 19:55:02] 2025-04-15 23:54:38,121 | INFO     | [payload] validate_pre thread has finished
[2025-04-15 19:55:02] 2025-04-15 23:54:38,132 | INFO     | [job] validate thread has finished
[2025-04-15 19:55:02] 2025-04-15 23:54:38,140 | INFO     | [job] control thread has finished
[2025-04-15 19:55:02] 2025-04-15 23:54:38,143 | INFO     | [job] job monitor thread has finished
[2025-04-15 19:55:02] 2025-04-15 23:54:38,323 | INFO     | [payload] control thread has finished
[2025-04-15 19:55:02] 2025-04-15 23:54:38,331 | INFO     | [payload] failed_post thread has finished
[2025-04-15 19:55:02] 2025-04-15 23:54:38,346 | INFO     | [payload] validate_post thread has finished
[2025-04-15 19:55:02] 2025-04-15 23:54:38,480 | INFO     | [data] copytool_out thread has finished
[2025-04-15 19:55:02] 2025-04-15 23:54:39,656 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-15 19:55:02] 2025-04-15 23:54:43,673 | INFO     | [data] queue_monitor thread has finished
[2025-04-15 19:55:02] 2025-04-15 23:54:44,360 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139845782157120)>', '<ExcThread(monitor, started 139845208897280)>']
[2025-04-15 19:55:02] 2025-04-15 23:54:45,228 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-15 19:55:02] 2025-04-15 23:54:45,229 | INFO     | [monitor] control thread has ended
[2025-04-15 19:55:02] 2025-04-15 23:54:49,386 | INFO     | all workflow threads have been joined
[2025-04-15 19:55:02] 2025-04-15 23:54:49,387 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-15 19:55:02] 2025-04-15 23:54:49,387 | INFO     | traces error code: 0
[2025-04-15 19:55:02] 2025-04-15 23:54:49,387 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-15 19:55:02] 2025-04-15 23:54:50,509 [wrapper] ==== pilot stdout END ====
[2025-04-15 19:55:02] 2025-04-15 23:54:50,540 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-15 19:55:02] 2025-04-15 23:54:50,552 [wrapper] pilotpid: 23775
[2025-04-15 19:55:02] 2025-04-15 23:54:50,577 [wrapper] Pilot exit status: 0
[2025-04-15 19:55:02] 2025-04-15 23:54:50,776 [wrapper] pandaids: 6602114689
[2025-04-15 19:55:02] 2025-04-15 23:54:51,331 [wrapper] cleanup supervisor_pilot 30314 23776
[2025-04-15 19:55:02] 2025-04-15 23:54:51,375 [wrapper] Test setup, not cleaning
[2025-04-15 19:55:02] 2025-04-15 23:54:51,424 [wrapper] apfmon messages muted
[2025-04-15 19:55:02] 2025-04-15 23:54:51,466 [wrapper] ==== wrapper stdout END ====
[2025-04-15 19:55:02] 2025-04-15 23:54:51,509 [wrapper] ==== wrapper stderr END ====
[2025-04-15 19:55:02]  *** Error codes and diagnostics ***
[2025-04-15 19:55:02]     "exeErrorCode": 0,
[2025-04-15 19:55:02]     "exeErrorDiag": "",
[2025-04-15 19:55:02]     "pilotErrorCode": 0,
[2025-04-15 19:55:02]     "pilotErrorDiag": "",
[2025-04-15 19:55:02]  *** Listing of results directory ***
[2025-04-15 19:55:02] total 432412
[2025-04-15 19:55:02] -rw-r--r-- 1 boincer umatlas    495897 Apr 13 23:01 pilot3.tar.gz
[2025-04-15 19:55:02] -rwx------ 1 boincer umatlas     37140 Apr 13 23:20 runpilot2-wrapper.sh
[2025-04-15 19:55:02] -rw-r--r-- 1 boincer umatlas      5111 Apr 13 23:20 queuedata.json
[2025-04-15 19:55:02] -rw-r--r-- 1 boincer umatlas       100 Apr 14 07:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-15 19:55:02] -rwxr-xr-x 1 boincer umatlas      7986 Apr 14 07:38 run_atlas
[2025-04-15 19:55:02] -rw-r--r-- 1 boincer umatlas       105 Apr 14 07:38 job.xml
[2025-04-15 19:55:02] -rw-r--r-- 2 boincer umatlas 223984255 Apr 14 07:39 EVNT.44075481._000481.pool.root.1
[2025-04-15 19:55:02] -rw-r--r-- 2 boincer umatlas     17569 Apr 14 07:39 start_atlas.sh
[2025-04-15 19:55:02] drwxrwx--x 2 boincer umatlas      4096 Apr 14 07:39 shared
[2025-04-15 19:55:02] -rw-r--r-- 2 boincer umatlas    508892 Apr 14 07:39 input.tar.gz
[2025-04-15 19:55:02] -rw-r--r-- 1 boincer umatlas         0 Apr 14 07:39 boinc_lockfile
[2025-04-15 19:55:02] -rw-r--r-- 1 boincer umatlas      2577 Apr 14 07:39 pandaJob.out
[2025-04-15 19:55:02] -rw------- 1 boincer umatlas       467 Apr 14 07:40 setup.sh.local
[2025-04-15 19:55:02] -rw------- 1 boincer umatlas    986024 Apr 14 07:42 agis_schedconf.cvmfs.json
[2025-04-15 19:55:02] drwx------ 4 boincer umatlas      4096 Apr 14 07:42 pilot3
[2025-04-15 19:55:02] -rw-r--r-- 1 boincer umatlas      6038 Apr 15 19:45 init_data.xml
[2025-04-15 19:55:02] -rw------- 1 boincer umatlas 196246656 Apr 15 19:49 HITS.44075483._012227.pool.root.1
[2025-04-15 19:55:02] -rw-r--r-- 1 boincer umatlas       533 Apr 15 19:50 boinc_task_state.xml
[2025-04-15 19:55:02] -rw------- 1 boincer umatlas      1062 Apr 15 19:52 memory_monitor_summary.json
[2025-04-15 19:55:02] -rw------- 1 boincer umatlas   1603529 Apr 15 19:52 agis_ddmendpoints.agis.ALL.json
[2025-04-15 19:55:02] -rw------- 1 boincer umatlas   1300925 Apr 15 19:53 log.44075483._012227.job.log.tgz.1
[2025-04-15 19:55:02] -rw------- 1 boincer umatlas        95 Apr 15 19:54 pilot_heartbeat.json
[2025-04-15 19:55:02] -rw------- 1 boincer umatlas      7765 Apr 15 19:54 heartbeat.json
[2025-04-15 19:55:02] -rw------- 1 boincer umatlas      4353 Apr 15 19:54 pilotlog.txt
[2025-04-15 19:55:02] -rw------- 1 boincer umatlas   8056115 Apr 15 19:54 log.44075483._012227.job.log.1
[2025-04-15 19:55:02] -rw------- 1 boincer umatlas       357 Apr 15 19:54 output.list
[2025-04-15 19:55:02] -rw-r--r-- 1 boincer umatlas       620 Apr 15 19:54 runtime_log
[2025-04-15 19:55:02] -rw------- 1 boincer umatlas   9379840 Apr 15 19:54 result.tar.gz
[2025-04-15 19:55:02] -rw-r--r-- 1 boincer umatlas     11422 Apr 15 19:54 runtime_log.err
[2025-04-15 19:55:02] -rw------- 1 boincer umatlas       668 Apr 15 19:54 fTCLDmBYPO7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmLzzKDmJpiLpn.diag
[2025-04-15 19:55:02] -rw-r--r-- 1 boincer umatlas        30 Apr 15 19:54 wrapper_checkpoint.txt
[2025-04-15 19:55:02] -rw-r--r-- 1 boincer umatlas      8192 Apr 15 19:55 boinc_mmap_file
[2025-04-15 19:55:02] -rw-r--r-- 1 boincer umatlas     21090 Apr 15 19:55 stderr.txt
[2025-04-15 19:55:02] HITS file was successfully produced:
[2025-04-15 19:55:02] -rw------- 1 boincer umatlas 196246656 Apr 15 19:49 shared/HITS.pool.root.1
[2025-04-15 19:55:02]  *** Contents of shared directory: ***
[2025-04-15 19:55:02] total 420072
[2025-04-15 19:55:02] -rw-r--r-- 2 boincer umatlas 223984255 Apr 14 07:39 ATLAS.root_0
[2025-04-15 19:55:02] -rw-r--r-- 2 boincer umatlas     17569 Apr 14 07:39 start_atlas.sh
[2025-04-15 19:55:02] -rw-r--r-- 2 boincer umatlas    508892 Apr 14 07:39 input.tar.gz
[2025-04-15 19:55:02] -rw------- 1 boincer umatlas 196246656 Apr 15 19:49 HITS.pool.root.1
[2025-04-15 19:55:02] -rw------- 1 boincer umatlas   9379840 Apr 15 19:54 result.tar.gz
19:55:04 (43742): run_atlas exited; CPU time 101619.162180
19:55:04 (43742): called boinc_finish(0)

</stderr_txt>
]]>

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