Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
22:39:14 (1348406): wrapper (7.7.26015): starting
22:39:14 (1348406): wrapper: running run_atlas (--nthreads 3)
[2025-04-14 22:39:14] Arguments: --nthreads 3
[2025-04-14 22:39:14] Threads: 3
[2025-04-14 22:39:14] Checking for CVMFS
[2025-04-14 22:39:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-14 22:39:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-14 22:39:14] Running cvmfs_config stat atlas.cern.ch
[2025-04-14 22:39:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-14 22:39:14] 2.9.2.0 179838 3997 72484 144862 1 56 25137080 36864001 0 130560 0 2808841 99.992 886433 5468 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-14 22:39:14] CVMFS is ok
[2025-04-14 22:39:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-14 22:39:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-14 22:39:14] Further information can be found at the LHC@home message board.
[2025-04-14 22:39:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-14 22:39:14] Checking for apptainer binary...
[2025-04-14 22:39:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-14 22:39:14] Running /usr/bin/apptainer --version
[2025-04-14 22:39:14] apptainer version 1.3.6-4.2
[2025-04-14 22:39:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-14 22:39:14] atlasA221b
[2025-04-14 22:39:14] apptainer works
[2025-04-14 22:39:14] Set ATHENA_PROC_NUMBER=3
[2025-04-14 22:39:14] Set ATHENA_CORE_NUMBER=3
[2025-04-14 22:39:14] Starting ATLAS job with PandaID=6602098589
[2025-04-14 22:39:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-15 00:13:45]  *** The last 200 lines of the pilot log: ***
[2025-04-15 00:13:45]  guid=c4b34fc5-af39-401d-94fc-f2dff526c045
[2025-04-15 00:13:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-15 00:13:45]  is_altstaged=None
[2025-04-15 00:13:45]  is_tar=False
[2025-04-15 00:13:45]  lfn=log.44075483._007965.job.log.tgz.1
[2025-04-15 00:13:45]  mtime=0
[2025-04-15 00:13:45]  protocol_id=None
[2025-04-15 00:13:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-15 00:13:45]  replicas=None
[2025-04-15 00:13:45]  scope=mc23_13p6TeV
[2025-04-15 00:13:45]  status=None
[2025-04-15 00:13:45]  status_code=0
[2025-04-15 00:13:45]  storage_token=
[2025-04-15 00:13:45]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6602098589/log.44075483._007965.job.log.tgz.1
[2025-04-15 00:13:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c9/93/log.44075483._007965.job.log.tgz.1
[2025-04-15 00:13:45]  workdir=None
[2025-04-15 00:13:45] ]
[2025-04-15 00:13:45] 2025-04-14 22:13:25,284 | INFO     | transferring file log.44075483._007965.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6602098589/log.44075483._007965.job.log.tgz.1 to /local/data/boinc/
[2025-04-15 00:13:45] 2025-04-14 22:13:25,284 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6602098589/log.44075483._007965.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0079
[2025-04-15 00:13:45] 2025-04-14 22:13:25,297 | INFO     | adding to output.list: log.44075483._007965.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c9/93/log.44075483._007965.job.log.tg
[2025-04-15 00:13:45] 2025-04-14 22:13:25,297 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-15 00:13:45] 2025-04-14 22:13:25,297 | INFO     | summary of transferred files:
[2025-04-15 00:13:45] 2025-04-14 22:13:25,298 | INFO     |  -- lfn=log.44075483._007965.job.log.tgz.1, status_code=0, status=transferred
[2025-04-15 00:13:45] 2025-04-14 22:13:25,298 | INFO     | stage-out finished correctly
[2025-04-15 00:13:45] 2025-04-14 22:13:25,329 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-15 00:13:45] 2025-04-14 22:13:27,156 | INFO     | job 6602098589 has state=finished
[2025-04-15 00:13:45] 2025-04-14 22:13:27,156 | INFO     | preparing for final server update for job 6602098589 in state='finished'
[2025-04-15 00:13:45] 2025-04-14 22:13:27,157 | INFO     | this job has now completed (state=finished)
[2025-04-15 00:13:45] 2025-04-14 22:13:27,157 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-15 00:13:45] 2025-04-14 22:13:27,158 | INFO     | log transfer has been attempted: DONE
[2025-04-15 00:13:45] 2025-04-14 22:13:27,158 | INFO     | job 6602098589 has finished - writing final server update
[2025-04-15 00:13:45] 2025-04-14 22:13:27,158 | INFO     | total number of processed events: 400 (read)
[2025-04-15 00:13:45] 2025-04-14 22:13:27,161 | INFO     | executing command: lscpu
[2025-04-15 00:13:45] 2025-04-14 22:13:27,174 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-15 00:13:45] 2025-04-14 22:13:28,005 | WARNING  | process 1358506 can no longer be monitored (due to stat problems) - aborting
[2025-04-15 00:13:45] 2025-04-14 22:13:28,005 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6602098589/memory_monitor_summary.json (trf name=prmon)
[2025-04-15 00:13:45] 2025-04-14 22:13:28,059 | INFO     | number of running child processes to parent process 1358506: 1
[2025-04-15 00:13:45] 2025-04-14 22:13:28,059 | INFO     | maximum number of monitored processes: 6
[2025-04-15 00:13:45] 2025-04-14 22:13:30,562 | INFO     | monitor loop #434: job 0:6602098589 is in state 'finished'
[2025-04-15 00:13:45] 2025-04-14 22:13:30,562 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 00:13:45] 2025-04-14 22:13:31,734 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-15 00:13:45] 2025-04-14 22:13:31,734 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6602098589/memory_monitor_summary.json (trf name=prmon)
[2025-04-15 00:13:45] 2025-04-14 22:13:31,734 | INFO     | extracted standard info from prmon json
[2025-04-15 00:13:45] 2025-04-14 22:13:31,734 | INFO     | extracted standard memory fields from prmon json
[2025-04-15 00:13:45] 2025-04-14 22:13:31,734 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-15 00:13:45] 2025-04-14 22:13:31,735 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-15 00:13:45] 2025-04-14 22:13:31,735 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-15 00:13:45] 2025-04-14 22:13:31,735 | INFO     | fitting pss+swap vs Time
[2025-04-15 00:13:45] 2025-04-14 22:13:31,736 | INFO     | sum of square deviations: 190403570.0
[2025-04-15 00:13:45] 2025-04-14 22:13:31,736 | INFO     | sum of deviations: 1789207897.0000088
[2025-04-15 00:13:45] 2025-04-14 22:13:31,736 | INFO     | mean x: 1744666057.0
[2025-04-15 00:13:45] 2025-04-14 22:13:31,736 | INFO     | mean y: 2379294.317647059
[2025-04-15 00:13:45] 2025-04-14 22:13:31,736 | INFO     | -- intersect: -16392115235.444939
[2025-04-15 00:13:45] 2025-04-14 22:13:31,736 | INFO     | intersect: -16392115235.444939
[2025-04-15 00:13:45] 2025-04-14 22:13:31,736 | INFO     | chi2: 1.0217504098229926
[2025-04-15 00:13:45] 2025-04-14 22:13:31,736 | INFO     | -- intersect: -16392115235.444939
[2025-04-15 00:13:45] 2025-04-14 22:13:31,736 | INFO     | current memory leak: 9.40 B/s (using 85 data points, chi2=1.02)
[2025-04-15 00:13:45] 2025-04-14 22:13:31,736 | INFO     | ..............................
[2025-04-15 00:13:45] 2025-04-14 22:13:31,736 | INFO     | . Timing measurements:
[2025-04-15 00:13:45] 2025-04-14 22:13:31,736 | INFO     | . get job = 0 s
[2025-04-15 00:13:45] 2025-04-14 22:13:31,736 | INFO     | . initial setup = 1 s
[2025-04-15 00:13:45] 2025-04-14 22:13:31,736 | INFO     | . payload setup = 4 s
[2025-04-15 00:13:45] 2025-04-14 22:13:31,736 | INFO     | . stage-in = 0 s
[2025-04-15 00:13:45] 2025-04-14 22:13:31,736 | INFO     | . payload execution = 5613 s
[2025-04-15 00:13:45] 2025-04-14 22:13:31,736 | INFO     | . stage-out = 0 s
[2025-04-15 00:13:45] 2025-04-14 22:13:31,736 | INFO     | . log creation = 0 s
[2025-04-15 00:13:45] 2025-04-14 22:13:31,736 | INFO     | ..............................
[2025-04-15 00:13:45] 2025-04-14 22:13:32,024 | INFO     | 
[2025-04-15 00:13:45] 2025-04-14 22:13:32,024 | INFO     | job summary report
[2025-04-15 00:13:45] 2025-04-14 22:13:32,025 | INFO     | --------------------------------------------------
[2025-04-15 00:13:45] 2025-04-14 22:13:32,025 | INFO     | PanDA job id: 6602098589
[2025-04-15 00:13:45] 2025-04-14 22:13:32,025 | INFO     | task id: 44075483
[2025-04-15 00:13:45] 2025-04-14 22:13:32,025 | INFO     | errors: (none)
[2025-04-15 00:13:45] 2025-04-14 22:13:32,025 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-15 00:13:45] 2025-04-14 22:13:32,025 | INFO     | pilot state: finished 
[2025-04-15 00:13:45] 2025-04-14 22:13:32,026 | INFO     | transexitcode: 0
[2025-04-15 00:13:45] 2025-04-14 22:13:32,026 | INFO     | exeerrorcode: 0
[2025-04-15 00:13:45] 2025-04-14 22:13:32,026 | INFO     | exeerrordiag: 
[2025-04-15 00:13:45] 2025-04-14 22:13:32,026 | INFO     | exitcode: 0
[2025-04-15 00:13:45] 2025-04-14 22:13:32,026 | INFO     | exitmsg: OK
[2025-04-15 00:13:45] 2025-04-14 22:13:32,026 | INFO     | cpuconsumptiontime: 14878 s
[2025-04-15 00:13:45] 2025-04-14 22:13:32,026 | INFO     | nevents: 400
[2025-04-15 00:13:45] 2025-04-14 22:13:32,027 | INFO     | neventsw: 0
[2025-04-15 00:13:45] 2025-04-14 22:13:32,027 | INFO     | pid: 1358506
[2025-04-15 00:13:45] 2025-04-14 22:13:32,027 | INFO     | pgrp: 1358506
[2025-04-15 00:13:45] 2025-04-14 22:13:32,027 | INFO     | corecount: 3
[2025-04-15 00:13:45] 2025-04-14 22:13:32,027 | INFO     | event service: False
[2025-04-15 00:13:45] 2025-04-14 22:13:32,027 | INFO     | sizes: {0: 2417361, 6: 2417567, 10: 2417595, 5622: 2444178, 5624: 2453181, 5630: 2453295}
[2025-04-15 00:13:45] 2025-04-14 22:13:32,027 | INFO     | --------------------------------------------------
[2025-04-15 00:13:45] 2025-04-14 22:13:32,027 | INFO     | 
[2025-04-15 00:13:45] 2025-04-14 22:13:32,028 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-15 00:13:45] 2025-04-14 22:13:32,041 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-15 00:13:45] 2025-04-14 22:13:32,041 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-15 00:13:45] 2025-04-14 22:13:32,041 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-15 00:13:45] 2025-04-14 22:13:32,041 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-15 00:13:45] 2025-04-14 22:13:32,041 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-15 00:13:45] 2025-04-14 22:13:32,041 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-15 00:13:45] 2025-04-14 22:13:32,042 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-15 00:13:45] 2025-04-14 22:13:32,042 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-15 00:13:45] 2025-04-14 22:13:32,042 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-15 00:13:45] 2025-04-14 22:13:32,042 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-15 00:13:45] 2025-04-14 22:13:32,042 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-15 00:13:45] 2025-04-14 22:13:32,042 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-15 00:13:45] 2025-04-14 22:13:32,042 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-15 00:13:45] 2025-04-14 22:13:32,042 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-15 00:13:45] 2025-04-14 22:13:32,042 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-15 00:13:45] 2025-04-14 22:13:32,042 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-15 00:13:45] 2025-04-14 22:13:32,042 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-15 00:13:45] 2025-04-14 22:13:32,042 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-15 00:13:45] 2025-04-14 22:13:32,042 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-15 00:13:45] 2025-04-14 22:13:32,042 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-15 00:13:45] 2025-04-14 22:13:32,043 | INFO     | job 6602098589 has completed (purged errors)
[2025-04-15 00:13:45] 2025-04-14 22:13:32,043 | INFO     | overall cleanup function is called
[2025-04-15 00:13:45] 2025-04-14 22:13:33,049 | INFO     | --- collectZombieJob: --- 10, [1358506]
[2025-04-15 00:13:45] 2025-04-14 22:13:33,049 | INFO     | zombie collector waiting for pid 1358506
[2025-04-15 00:13:45] 2025-04-14 22:13:33,050 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-15 00:13:45] 2025-04-14 22:13:33,050 | INFO     | collected zombie processes
[2025-04-15 00:13:45] 2025-04-14 22:13:33,050 | INFO     | will attempt to kill all subprocesses of pid=1358506
[2025-04-15 00:13:45] 2025-04-14 22:13:33,090 | INFO     | process IDs to be killed: [1358506] (in reverse order)
[2025-04-15 00:13:45] 2025-04-14 22:13:33,116 | WARNING  | found no corresponding commands to process id(s)
[2025-04-15 00:13:45] 2025-04-14 22:13:33,116 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-15 00:13:45] 2025-04-14 22:13:33,117 | INFO     | did not find any defunct processes belonging to 1358506
[2025-04-15 00:13:45] 2025-04-14 22:13:33,118 | INFO     | did not find any defunct processes belonging to 1358506
[2025-04-15 00:13:45] 2025-04-14 22:13:33,118 | INFO     | ready for new job
[2025-04-15 00:13:45] 2025-04-14 22:13:33,118 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-15 00:13:45] 2025-04-14 22:13:33,119 | INFO     | **************************************
[2025-04-15 00:13:45] 2025-04-14 22:13:33,119 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-15 00:13:45] 2025-04-14 22:13:33,119 | INFO     | **************************************
[2025-04-15 00:13:45] 2025-04-14 22:13:33,119 | INFO     | 
[2025-04-15 00:13:45] 2025-04-14 22:13:33,119 | INFO     | architecture information:
[2025-04-15 00:13:45] 2025-04-14 22:13:33,120 | INFO     | executing command: cat /etc/os-release
[2025-04-15 00:13:45] 2025-04-14 22:13:33,129 | INFO     | cat /etc/os-release:
[2025-04-15 00:13:45] NAME="CentOS Linux"
[2025-04-15 00:13:45] VERSION="7 (Core)"
[2025-04-15 00:13:45] ID="centos"
[2025-04-15 00:13:45] ID_LIKE="rhel fedora"
[2025-04-15 00:13:45] VERSION_ID="7"
[2025-04-15 00:13:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-15 00:13:45] ANSI_COLOR="0;31"
[2025-04-15 00:13:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-15 00:13:45] HOME_URL="https://www.centos.org/"
[2025-04-15 00:13:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-15 00:13:45] 
[2025-04-15 00:13:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-15 00:13:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-15 00:13:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-15 00:13:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-15 00:13:45] 
[2025-04-15 00:13:45] 2025-04-14 22:13:33,129 | INFO     | **************************************
[2025-04-15 00:13:45] 2025-04-14 22:13:33,632 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-15 00:13:45] 2025-04-14 22:13:33,646 | INFO     | sufficient remaining disk space (330441949184 B)
[2025-04-15 00:13:45] 2025-04-14 22:13:33,646 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-15 00:13:45] 2025-04-14 22:13:33,646 | INFO     | current server update state: UPDATING_FINAL
[2025-04-15 00:13:45] 2025-04-14 22:13:33,646 | INFO     | update_server=False
[2025-04-15 00:13:45] 2025-04-14 22:13:33,647 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-15 00:13:45] 2025-04-14 22:13:33,647 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-15 00:13:45] 2025-04-14 22:13:33,647 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-15 00:13:45] 2025-04-14 22:13:33,647 | INFO     | found 0 job(s) in 20 queues
[2025-04-15 00:13:45] 2025-04-14 22:13:33,647 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-15 00:13:45] 2025-04-14 22:13:33,647 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-15 00:13:45] 2025-04-14 22:13:33,647 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-15 00:13:45] 2025-04-14 22:13:34,071 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-15 00:13:45] 2025-04-14 22:13:34,072 | INFO     | aborting loop
[2025-04-15 00:13:45] 2025-04-14 22:13:34,652 | INFO     | [job] queue monitor thread has finished
[2025-04-15 00:13:45] 2025-04-14 22:13:34,653 | INFO     | [job] retrieve thread has finished
[2025-04-15 00:13:45] 2025-04-14 22:13:34,662 | INFO     | [job] validate thread has finished
[2025-04-15 00:13:45] 2025-04-14 22:13:34,705 | INFO     | all data control threads have been joined
[2025-04-15 00:13:45] 2025-04-14 22:13:34,744 | INFO     | [payload] validate_pre thread has finished
[2025-04-15 00:13:45] 2025-04-14 22:13:34,825 | INFO     | [job] create_data_payload thread has finished
[2025-04-15 00:13:45] 2025-04-14 22:13:34,971 | INFO     | [payload] execute_payloads thread has finished
[2025-04-15 00:13:45] 2025-04-14 22:13:35,077 | INFO     | [job] job monitor thread has finished
[2025-04-15 00:13:45] 2025-04-14 22:13:35,137 | INFO     | all payload control threads have been joined
[2025-04-15 00:13:45] 2025-04-14 22:13:35,344 | INFO     | all job control threads have been joined
[2025-04-15 00:13:45] 2025-04-14 22:13:35,441 | INFO     | [payload] failed_post thread has finished
[2025-04-15 00:13:45] 2025-04-14 22:13:35,578 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-15 00:13:45] 2025-04-14 22:13:35,650 | INFO     | [data] copytool_out thread has finished
[2025-04-15 00:13:45] 2025-04-14 22:13:35,711 | INFO     | [data] control thread has finished
[2025-04-15 00:13:45] 2025-04-14 22:13:35,870 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-15 00:13:45] 2025-04-14 22:13:35,993 | INFO     | [payload] validate_post thread has finished
[2025-04-15 00:13:45] 2025-04-14 22:13:36,007 | INFO     | [data] copytool_in thread has finished
[2025-04-15 00:13:45] 2025-04-14 22:13:36,143 | INFO     | [payload] control thread has finished
[2025-04-15 00:13:45] 2025-04-14 22:13:36,350 | INFO     | [job] control thread has finished
[2025-04-15 00:13:45] 2025-04-14 22:13:39,877 | INFO     | [data] queue_monitor thread has finished
[2025-04-15 00:13:45] 2025-04-14 22:13:40,640 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140502157641536)>', '<ExcThread(monitor, started 140501508409088)>']
[2025-04-15 00:13:45] 2025-04-14 22:13:40,685 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-15 00:13:45] 2025-04-14 22:13:40,685 | INFO     | [monitor] control thread has ended
[2025-04-15 00:13:45] 2025-04-14 22:13:45,666 | INFO     | all workflow threads have been joined
[2025-04-15 00:13:45] 2025-04-14 22:13:45,666 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-15 00:13:45] 2025-04-14 22:13:45,667 | INFO     | traces error code: 0
[2025-04-15 00:13:45] 2025-04-14 22:13:45,667 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-15 00:13:45] 2025-04-14 22:13:45,712 [wrapper] ==== pilot stdout END ====
[2025-04-15 00:13:45] 2025-04-14 22:13:45,716 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-15 00:13:45] 2025-04-14 22:13:45,719 [wrapper] pilotpid: 1352067
[2025-04-15 00:13:45] 2025-04-14 22:13:45,721 [wrapper] Pilot exit status: 0
[2025-04-15 00:13:45] 2025-04-14 22:13:45,730 [wrapper] pandaids: 6602098589
[2025-04-15 00:13:45] 2025-04-14 22:13:45,746 [wrapper] cleanup supervisor_pilot 1370996 1352068
[2025-04-15 00:13:45] 2025-04-14 22:13:45,749 [wrapper] Test setup, not cleaning
[2025-04-15 00:13:45] 2025-04-14 22:13:45,751 [wrapper] apfmon messages muted
[2025-04-15 00:13:45] 2025-04-14 22:13:45,754 [wrapper] ==== wrapper stdout END ====
[2025-04-15 00:13:45] 2025-04-14 22:13:45,756 [wrapper] ==== wrapper stderr END ====
[2025-04-15 00:13:45]  *** Error codes and diagnostics ***
[2025-04-15 00:13:45]     "exeErrorCode": 0,
[2025-04-15 00:13:45]     "exeErrorDiag": "",
[2025-04-15 00:13:45]     "pilotErrorCode": 0,
[2025-04-15 00:13:45]     "pilotErrorDiag": "",
[2025-04-15 00:13:45]  *** Listing of results directory ***
[2025-04-15 00:13:45] total 412264
[2025-04-15 00:13:45] -rw-r--r-- 1 boinc boinc      5111 Apr 13 20:44 queuedata.json
[2025-04-15 00:13:45] -rw-r--r-- 1 boinc boinc    495897 Apr 13 20:45 pilot3.tar.gz
[2025-04-15 00:13:45] -rwx------ 1 boinc boinc     37140 Apr 13 20:45 runpilot2-wrapper.sh
[2025-04-15 00:13:45] -rw-r--r-- 1 boinc boinc       100 Apr 14 22:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-15 00:13:45] -rwxr-xr-x 1 boinc boinc      7986 Apr 14 22:39 run_atlas
[2025-04-15 00:13:45] -rw-r--r-- 1 boinc boinc       105 Apr 14 22:39 job.xml
[2025-04-15 00:13:45] -rw-r--r-- 2 boinc boinc 225463815 Apr 14 22:39 EVNT.44075481._000311.pool.root.1
[2025-04-15 00:13:45] -rw-r--r-- 1 boinc boinc      6683 Apr 14 22:39 init_data.xml
[2025-04-15 00:13:45] drwxrwx--x 2 boinc boinc      4096 Apr 14 22:39 shared
[2025-04-15 00:13:45] -rw-r--r-- 2 boinc boinc    508892 Apr 14 22:39 input.tar.gz
[2025-04-15 00:13:45] -rw-r--r-- 2 boinc boinc     17569 Apr 14 22:39 start_atlas.sh
[2025-04-15 00:13:45] -rw-r--r-- 1 boinc boinc         0 Apr 14 22:39 boinc_lockfile
[2025-04-15 00:13:45] -rw-r--r-- 1 boinc boinc      2575 Apr 14 22:39 pandaJob.out
[2025-04-15 00:13:45] -rw------- 1 boinc boinc       424 Apr 14 22:39 setup.sh.local
[2025-04-15 00:13:45] -rw------- 1 boinc boinc    986091 Apr 14 22:39 agis_schedconf.cvmfs.json
[2025-04-15 00:13:45] -rw------- 1 boinc boinc   1603529 Apr 14 22:39 agis_ddmendpoints.agis.ALL.json
[2025-04-15 00:13:45] drwx------ 4 boinc boinc      4096 Apr 14 22:39 pilot3
[2025-04-15 00:13:45] -rw------- 1 boinc boinc        95 Apr 15 00:12 pilot_heartbeat.json
[2025-04-15 00:13:45] -rw------- 1 boinc boinc 191316583 Apr 15 00:13 HITS.44075483._007965.pool.root.1
[2025-04-15 00:13:45] -rw-r--r-- 1 boinc boinc       529 Apr 15 00:13 boinc_task_state.xml
[2025-04-15 00:13:45] -rw------- 1 boinc boinc      1032 Apr 15 00:13 memory_monitor_summary.json
[2025-04-15 00:13:45] -rw------- 1 boinc boinc    224038 Apr 15 00:13 log.44075483._007965.job.log.tgz.1
[2025-04-15 00:13:45] -rw------- 1 boinc boinc      7661 Apr 15 00:13 heartbeat.json
[2025-04-15 00:13:45] -rw-r--r-- 1 boinc boinc      8192 Apr 15 00:13 boinc_mmap_file
[2025-04-15 00:13:45] -rw-r--r-- 1 boinc boinc        27 Apr 15 00:13 wrapper_checkpoint.txt
[2025-04-15 00:13:45] -rw------- 1 boinc boinc      4480 Apr 15 00:13 pilotlog.txt
[2025-04-15 00:13:45] -rw------- 1 boinc boinc    543179 Apr 15 00:13 log.44075483._007965.job.log.1
[2025-04-15 00:13:45] -rw------- 1 boinc boinc       357 Apr 15 00:13 output.list
[2025-04-15 00:13:45] -rw-r--r-- 1 boinc boinc       620 Apr 15 00:13 runtime_log
[2025-04-15 00:13:45] -rw------- 1 boinc boinc    788480 Apr 15 00:13 result.tar.gz
[2025-04-15 00:13:45] -rw-r--r-- 1 boinc boinc     11119 Apr 15 00:13 runtime_log.err
[2025-04-15 00:13:45] -rw------- 1 boinc boinc       662 Apr 15 00:13 cH8NDm4VHO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmnaULDmkT4bKo.diag
[2025-04-15 00:13:45] -rw-r--r-- 1 boinc boinc     21316 Apr 15 00:13 stderr.txt
[2025-04-15 00:13:45] HITS file was successfully produced:
[2025-04-15 00:13:45] -rw------- 1 boinc boinc 191316583 Apr 15 00:13 shared/HITS.pool.root.1
[2025-04-15 00:13:45]  *** Contents of shared directory: ***
[2025-04-15 00:13:45] total 408312
[2025-04-15 00:13:45] -rw-r--r-- 2 boinc boinc 225463815 Apr 14 22:39 ATLAS.root_0
[2025-04-15 00:13:45] -rw-r--r-- 2 boinc boinc    508892 Apr 14 22:39 input.tar.gz
[2025-04-15 00:13:45] -rw-r--r-- 2 boinc boinc     17569 Apr 14 22:39 start_atlas.sh
[2025-04-15 00:13:45] -rw------- 1 boinc boinc 191316583 Apr 15 00:13 HITS.pool.root.1
[2025-04-15 00:13:45] -rw------- 1 boinc boinc    788480 Apr 15 00:13 result.tar.gz
00:13:47 (1348406): run_atlas exited; CPU time 14908.370114
00:13:47 (1348406): called boinc_finish(0)

</stderr_txt>
]]>

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