Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-14 06:17:04 (1451143): Detected: vboxwrapper 26206
2025-04-14 06:17:04 (1451143): Detected: BOINC client v8.0.4
2025-04-14 06:17:05 (1451143): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-04-14 06:17:05 (1451143): Successfully copied 'init_data.xml' to the shared directory.
2025-04-14 06:17:06 (1451143): Create VM. (boinc_8ffd7158efb6c36e, slot#2)
2025-04-14 06:17:07 (1451143): Setting Memory Size for VM. (4200MB)
2025-04-14 06:17:07 (1451143): Setting CPU Count for VM. (2)
2025-04-14 06:17:07 (1451143): Setting Chipset Options for VM.
2025-04-14 06:17:08 (1451143): Setting Graphics Controller Options for VM.
2025-04-14 06:17:08 (1451143): Setting Boot Options for VM.
2025-04-14 06:17:08 (1451143): Setting Network Configuration for NAT.
2025-04-14 06:17:09 (1451143): Enabling VM Network Access.
2025-04-14 06:17:09 (1451143): Disabling USB Support for VM.
2025-04-14 06:17:09 (1451143): Disabling COM Port Support for VM.
2025-04-14 06:17:10 (1451143): Disabling LPT Port Support for VM.
2025-04-14 06:17:10 (1451143): Disabling Audio Support for VM.
2025-04-14 06:17:11 (1451143): Disabling Clipboard Support for VM.
2025-04-14 06:17:11 (1451143): Disabling Drag and Drop Support for VM.
2025-04-14 06:17:11 (1451143): Adding storage controller(s) to VM.
2025-04-14 06:17:12 (1451143): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-14 06:17:20 (1451143): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-14 06:17:20 (1451143): forwarding host port 43291 to guest port 80
2025-04-14 06:17:20 (1451143): Enabling remote desktop for VM.
2025-04-14 06:17:21 (1451143): Enabling shared directory for VM.
2025-04-14 06:17:22 (1451143): Starting VM using VBoxManage interface. (boinc_8ffd7158efb6c36e, slot#2)
2025-04-14 06:17:24 (1451143): Successfully started VM. (PID = '1451631')
2025-04-14 06:17:24 (1451143): Reporting VM Process ID to BOINC.
2025-04-14 06:17:24 (1451143): Guest Log: BIOS: VirtualBox 7.0.16
2025-04-14 06:17:24 (1451143): Guest Log: CPUID EDX: 0x178bfbff
2025-04-14 06:17:24 (1451143): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-14 06:17:24 (1451143): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-14 06:17:24 (1451143): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-14 06:17:24 (1451143): Detected: Web Application Enabled (http://localhost:43291)
2025-04-14 06:17:24 (1451143): Detected: Remote Desktop Enabled (localhost:52813)
2025-04-14 06:17:24 (1451143): Preference change detected
2025-04-14 06:17:24 (1451143): Setting CPU throttle for VM. (100%)
2025-04-14 06:17:25 (1451143): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-14 06:17:26 (1451143): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-14 06:17:27 (1451143): Guest Log: BIOS: Booting from Hard Disk...
2025-04-14 06:17:32 (1451143): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-14 06:17:32 (1451143): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-14 06:17:32 (1451143): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-14 06:17:57 (1451143): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-14 06:17:57 (1451143): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-14 06:19:06 (1451143): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-14 06:19:06 (1451143): Guest Log: 00:00:00.001430 main     Log opened 2025-04-14T13:19:04.900750000Z
2025-04-14 06:19:06 (1451143): Guest Log: 00:00:00.002118 main     OS Product: Linux
2025-04-14 06:19:06 (1451143): Guest Log: 00:00:00.002479 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-14 06:19:06 (1451143): Guest Log: 00:00:00.002610 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-14 06:19:06 (1451143): Guest Log: 00:00:00.003161 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-14 06:19:06 (1451143): Guest Log: 00:00:00.003168 main     Process ID: 1251
2025-04-14 06:19:06 (1451143): Guest Log: 00:00:00.003173 main     Package type: LINUX_64BITS_GENERIC
2025-04-14 06:19:06 (1451143): Guest Log: 00:00:00.009142 main     5.2.32 r132073 started. Verbose level = 0
2025-04-14 06:19:08 (1451143): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-14 06:19:08 (1451143): Guest Log: [INFO] Mounting shared directory
2025-04-14 06:19:08 (1451143): Guest Log: [INFO] Checking for init_data.xml
2025-04-14 06:19:23 (1451143): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-14 06:19:23 (1451143): Guest Log: [INFO] Detected branch: prod
2025-04-14 06:19:24 (1451143): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-14 06:19:24 (1451143): Guest Log: Copying input files
2025-04-14 06:19:33 (1451143): Guest Log: Copied input files into RunAtlas.
2025-04-14 06:19:33 (1451143): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-14 06:19:33 (1451143): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-14 06:19:33 (1451143): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-14 06:19:33 (1451143): Guest Log: Further information can be found at the LHC@home message board.
2025-04-14 06:19:46 (1451143): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-14 06:19:47 (1451143): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-14 06:19:47 (1451143): Guest Log: 2.6.3.0 1537 0 32244 144850 3 1 3119946 4096000 0 65024 0 0 n/a 1171 1542 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-14 06:20:11 (1451143): Guest Log: copied the webapp to /var/www
2025-04-14 06:20:11 (1451143): Guest Log: ATHENA_PROC_NUMBER=2
2025-04-14 06:20:11 (1451143): Guest Log: ATHENA_CORE_NUMBER=2
2025-04-14 06:20:12 (1451143): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-14 06:20:12 (1451143): Guest Log:  *** Starting ATLAS job. (PandaID=6602110525 taskID=44075483) ***
2025-04-14 06:50:54 (1451143): Guest Log:  *** Job finished ***
2025-04-14 06:50:54 (1451143): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-14 06:50:54 (1451143): Guest Log: 2025-04-14 13:50:40,669 | INFO     | [job] queue monitor thread has finished
2025-04-14 06:50:54 (1451143): Guest Log: 2025-04-14 13:50:40,799 | INFO     | [data] copytool_out thread has finished
2025-04-14 06:50:54 (1451143): Guest Log: 2025-04-14 13:50:42,474 | INFO     | [data] queue_monitor thread has finished
2025-04-14 06:50:54 (1451143): Guest Log: 2025-04-14 13:50:44,480 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139779022329664)>', '<ExcThread(monitor, started 139778225858304)>']
2025-04-14 06:50:54 (1451143): Guest Log: 2025-04-14 13:50:45,107 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-14 06:50:54 (1451143): Guest Log: 2025-04-14 13:50:45,110 | INFO     | [monitor] control thread has ended
2025-04-14 06:50:54 (1451143): Guest Log: 2025-04-14 13:50:49,494 | INFO     | all workflow threads have been joined
2025-04-14 06:50:54 (1451143): Guest Log: 2025-04-14 13:50:49,496 | INFO     | end of generic workflow (traces error code: 0)
2025-04-14 06:50:54 (1451143): Guest Log: 2025-04-14 13:50:49,498 | INFO     | traces error code: 0
2025-04-14 06:50:54 (1451143): Guest Log: 2025-04-14 13:50:49,500 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-14 06:50:54 (1451143): Guest Log: 2025-04-14 13:50:50,252 [wrapper] ==== pilot stdout END ====
2025-04-14 06:50:54 (1451143): Guest Log: 2025-04-14 13:50:50,310 [wrapper] ==== wrapper stdout RESUME ====
2025-04-14 06:50:54 (1451143): Guest Log: 2025-04-14 13:50:50,368 [wrapper] pilotpid: 5871
2025-04-14 06:50:54 (1451143): Guest Log: 2025-04-14 13:50:50,424 [wrapper] Pilot exit status: 0
2025-04-14 06:50:54 (1451143): Guest Log: 2025-04-14 13:50:50,744 [wrapper] pandaids: 6602110525
2025-04-14 06:50:54 (1451143): Guest Log: 2025-04-14 13:50:51,049 [wrapper] cleanup supervisor_pilot 28489 5872
2025-04-14 06:50:54 (1451143): Guest Log: 2025-04-14 13:50:51,106 [wrapper] Test setup, not cleaning
2025-04-14 06:50:54 (1451143): Guest Log: 2025-04-14 13:50:51,164 [wrapper] apfmon messages muted
2025-04-14 06:50:54 (1451143): Guest Log: 2025-04-14 13:50:51,223 [wrapper] ==== wrapper stdout END ====
2025-04-14 06:50:54 (1451143): Guest Log: 2025-04-14 13:50:51,280 [wrapper] ==== wrapper stderr END ====
2025-04-14 06:50:54 (1451143): Guest Log:  *** Error codes and diagnostics ***
2025-04-14 06:50:54 (1451143): Guest Log:     "exeErrorCode": 65,
2025-04-14 06:50:54 (1451143): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-04-14 06:50:54 (1451143): Guest Log:     "pilotErrorCode": 1305,
2025-04-14 06:50:54 (1451143): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-04-14 06:50:54 (1451143): Guest Log:  *** Listing of results directory ***
2025-04-14 06:50:54 (1451143): Guest Log: total 4500
2025-04-14 06:50:54 (1451143): Guest Log: -rw-r--r--. 1 atlas atlas  495897 Apr 14 01:38 pilot3.tar.gz
2025-04-14 06:50:54 (1451143): Guest Log: -rwx------. 1 atlas atlas   37140 Apr 14 01:41 runpilot2-wrapper.sh
2025-04-14 06:50:54 (1451143): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Apr 14 01:41 queuedata.json
2025-04-14 06:50:54 (1451143): Guest Log: -rw-r--r--. 1 atlas atlas  508893 Apr 14 13:19 input.tar.gz
2025-04-14 06:50:54 (1451143): Guest Log: -rw-r--r--. 1 atlas atlas   17569 Apr 14 13:19 start_atlas.sh
2025-04-14 06:50:54 (1451143): Guest Log: -rw-r--r--. 1 atlas atlas    6146 Apr 14 13:19 init_data.xml
2025-04-14 06:50:54 (1451143): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr 14 13:19 EVNT.44075481._000448.pool.root.1 -> /data/./ATLAS.root_0
2025-04-14 06:50:54 (1451143): Guest Log: -rw-r--r--. 1 atlas atlas    2578 Apr 14 13:20 pandaJob.out
2025-04-14 06:50:54 (1451143): Guest Log: -rw-------. 1 atlas atlas     424 Apr 14 13:20 setup.sh.local
2025-04-14 06:50:54 (1451143): Guest Log: -rw-------. 1 atlas atlas  986127 Apr 14 13:23 agis_schedconf.cvmfs.json
2025-04-14 06:50:54 (1451143): Guest Log: -rw-------. 1 atlas atlas 1603529 Apr 14 13:23 agis_ddmendpoints.agis.ALL.json
2025-04-14 06:50:54 (1451143): Guest Log: drwx------. 4 atlas atlas    4096 Apr 14 13:23 pilot3
2025-04-14 06:50:54 (1451143): Guest Log: -rw-------. 1 atlas atlas   65780 Apr 14 13:47 log.44075483._011400.job.log.tgz.1
2025-04-14 06:50:54 (1451143): Guest Log: -rw-------. 1 atlas atlas      95 Apr 14 13:49 pilot_heartbeat.json
2025-04-14 06:50:54 (1451143): Guest Log: -rw-------. 1 atlas atlas    8063 Apr 14 13:50 heartbeat.json
2025-04-14 06:50:54 (1451143): Guest Log: -rw-------. 1 atlas atlas    4536 Apr 14 13:50 pilotlog.txt
2025-04-14 06:50:54 (1451143): Guest Log: -rw-------. 1 atlas atlas  353873 Apr 14 13:50 log.44075483._011400.job.log.1
2025-04-14 06:50:54 (1451143): Guest Log: -rw-------. 1 atlas atlas     188 Apr 14 13:50 output.list
2025-04-14 06:50:54 (1451143): Guest Log: -rw-r--r--. 1 atlas atlas     620 Apr 14 13:50 runtime_log
2025-04-14 06:50:54 (1451143): Guest Log: -rw-------. 1 atlas atlas  440320 Apr 14 13:50 result.tar.gz
2025-04-14 06:50:54 (1451143): Guest Log: -rw-------. 1 atlas atlas     666 Apr 14 13:50 sDfKDml0NO7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm8vzKDmtXU4am.diag
2025-04-14 06:50:54 (1451143): Guest Log: -rw-r--r--. 1 atlas atlas   10840 Apr 14 13:50 runtime_log.err
2025-04-14 06:50:54 (1451143): Guest Log: Looking for outputfile HITS.44075483._011400.pool.root.1
2025-04-14 06:50:54 (1451143): Guest Log: No HITS file was produced
2025-04-14 06:50:54 (1451143): Guest Log: Successfully finished the ATLAS job!
2025-04-14 06:50:54 (1451143): Guest Log: Copying the results back to the shared directory!
2025-04-14 06:50:55 (1451143): Guest Log:  *** Contents of shared directory: ***
2025-04-14 06:50:55 (1451143): Guest Log: total 221180
2025-04-14 06:50:55 (1451143): Guest Log: -rw-r--r--. 1 root root 225499749 Apr 14 13:17 ATLAS.root_0
2025-04-14 06:50:55 (1451143): Guest Log: -rw-r--r--. 1 root root      6146 Apr 14 13:17 init_data.xml
2025-04-14 06:50:55 (1451143): Guest Log: -rw-r--r--. 1 root root    508893 Apr 14 13:17 input.tar.gz
2025-04-14 06:50:55 (1451143): Guest Log: -rw-r--r--. 1 root root    440320 Apr 14  2025 result.tar.gz
2025-04-14 06:50:55 (1451143): Guest Log: -rw-r--r--. 1 root root     17569 Apr 14 13:17 start_atlas.sh
2025-04-14 06:50:55 (1451143): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-14 06:50:56 (1451143): VM Completion File Detected.
2025-04-14 06:50:56 (1451143): Powering off VM.
2025-04-14 06:50:57 (1451143): Successfully stopped VM.
2025-04-14 06:50:57 (1451143): Deregistering VM. (boinc_8ffd7158efb6c36e, slot#2)
2025-04-14 06:50:57 (1451143): Removing network bandwidth throttle group from VM.
2025-04-14 06:50:58 (1451143): Removing VM from VirtualBox.
06:51:03 (1451143): called boinc_finish(0)

</stderr_txt>
]]>

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