Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:10:28 (64067): wrapper (7.7.26015): starting
04:10:28 (64067): wrapper: running run_atlas (--nthreads 8)
[2025-04-14 04:10:28] Arguments: --nthreads 8
[2025-04-14 04:10:28] Threads: 8
[2025-04-14 04:10:28] Checking for CVMFS
[2025-04-14 04:10:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-14 04:10:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-14 04:10:29] Running cvmfs_config stat atlas.cern.ch
[2025-04-14 04:10:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-14 04:10:30] 2.11.2.0 66527 12941 129208 144840 0 515 17741908 18432001 20864 130560 0 66234759 98.702 182519928 57557 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-14 04:10:30] CVMFS is ok
[2025-04-14 04:10:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-14 04:10:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-14 04:10:30] Further information can be found at the LHC@home message board.
[2025-04-14 04:10:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-14 04:10:30] Checking for apptainer binary...
[2025-04-14 04:10:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-14 04:10:30] Running /usr/bin/apptainer --version
[2025-04-14 04:10:30] apptainer version 1.3.2-1.el7
[2025-04-14 04:10:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-14 04:10:44] c-212-3.aglt2.org
[2025-04-14 04:10:44] apptainer works
[2025-04-14 04:10:44] Set ATHENA_PROC_NUMBER=8
[2025-04-14 04:10:44] Set ATHENA_CORE_NUMBER=8
[2025-04-14 04:10:44] Starting ATLAS job with PandaID=6600391076
[2025-04-14 04:10:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-14 08:13:48]  *** The last 200 lines of the pilot log: ***
[2025-04-14 08:13:48] 2025-04-14 12:13:32,168 | INFO     | mean y: 2347011.96069869
[2025-04-14 08:13:48] 2025-04-14 12:13:32,168 | INFO     | -- intersect: -95704042947.85764
[2025-04-14 08:13:48] 2025-04-14 12:13:32,169 | INFO     | intersect: -95704042947.85764
[2025-04-14 08:13:48] 2025-04-14 12:13:32,169 | INFO     | chi2: 8.801035667275748
[2025-04-14 08:13:48] 2025-04-14 12:13:32,169 | INFO     | current chi2=8.801035667275748 (change=2.3847904711271117 %)
[2025-04-14 08:13:48] 2025-04-14 12:13:32,169 | INFO     | right removable region: 228
[2025-04-14 08:13:48] 2025-04-14 12:13:32,169 | INFO     | sum of square deviations: 3723759650.6462984
[2025-04-14 08:13:48] 2025-04-14 12:13:32,187 | INFO     | sum of deviations: 126756058696.8514
[2025-04-14 08:13:48] 2025-04-14 12:13:32,187 | INFO     | mean x: 1744625792.0393014
[2025-04-14 08:13:48] 2025-04-14 12:13:32,187 | INFO     | mean y: 2390692.572052402
[2025-04-14 08:13:48] 2025-04-14 12:13:32,187 | INFO     | -- intersect: -59384334028.34085
[2025-04-14 08:13:48] 2025-04-14 12:13:32,187 | INFO     | intersect: -59384334028.34085
[2025-04-14 08:13:48] 2025-04-14 12:13:32,188 | INFO     | chi2: 4.511374848829922
[2025-04-14 08:13:48] 2025-04-14 12:13:32,188 | INFO     | current chi2=4.511374848829922 (change=49.962843262952724 %)
[2025-04-14 08:13:48] 2025-04-14 12:13:32,188 | INFO     | sum of square deviations: 3485129175.6383963
[2025-04-14 08:13:48] 2025-04-14 12:13:32,189 | INFO     | sum of deviations: 74540245503.26346
[2025-04-14 08:13:48] 2025-04-14 12:13:32,189 | INFO     | mean x: 1744625944.5401785
[2025-04-14 08:13:48] 2025-04-14 12:13:32,189 | INFO     | mean y: 2424039.9151785714
[2025-04-14 08:13:48] 2025-04-14 12:13:32,189 | INFO     | -- intersect: -37311787188.30036
[2025-04-14 08:13:48] 2025-04-14 12:13:32,190 | INFO     | intersect: -37311787188.30036
[2025-04-14 08:13:48] 2025-04-14 12:13:32,190 | INFO     | chi2: 2.4806123031658633
[2025-04-14 08:13:48] 2025-04-14 12:13:32,207 | INFO     | current chi2=2.4806123031658633 (change=45.01427200603295 %)
[2025-04-14 08:13:48] 2025-04-14 12:13:32,207 | INFO     | sum of square deviations: 3256917500.630151
[2025-04-14 08:13:48] 2025-04-14 12:13:32,209 | INFO     | sum of deviations: 28350385296.91779
[2025-04-14 08:13:48] 2025-04-14 12:13:32,209 | INFO     | mean x: 1744626097.041096
[2025-04-14 08:13:48] 2025-04-14 12:13:32,209 | INFO     | mean y: 2454909.6757990867
[2025-04-14 08:13:48] 2025-04-14 12:13:32,209 | INFO     | -- intersect: -15183935915.576372
[2025-04-14 08:13:48] 2025-04-14 12:13:32,209 | INFO     | intersect: -15183935915.576372
[2025-04-14 08:13:48] 2025-04-14 12:13:32,209 | INFO     | chi2: 0.905633065385006
[2025-04-14 08:13:48] 2025-04-14 12:13:32,209 | INFO     | current chi2=0.905633065385006 (change=63.49155149197646 %)
[2025-04-14 08:13:48] 2025-04-14 12:13:32,210 | INFO     | sum of square deviations: 3038892063.121509
[2025-04-14 08:13:48] 2025-04-14 12:13:32,225 | INFO     | sum of deviations: 1286934751.1775703
[2025-04-14 08:13:48] 2025-04-14 12:13:32,225 | INFO     | mean x: 1744626249.542056
[2025-04-14 08:13:48] 2025-04-14 12:13:32,225 | INFO     | mean y: 2473719.3691588785
[2025-04-14 08:13:48] 2025-04-14 12:13:32,226 | INFO     | -- intersect: -736354808.1718962
[2025-04-14 08:13:48] 2025-04-14 12:13:32,226 | INFO     | intersect: -736354808.1718962
[2025-04-14 08:13:48] 2025-04-14 12:13:32,226 | INFO     | chi2: 0.22608526534171297
[2025-04-14 08:13:48] 2025-04-14 12:13:32,226 | INFO     | current chi2=0.22608526534171297 (change=75.03566576982271 %)
[2025-04-14 08:13:48] 2025-04-14 12:13:32,226 | INFO     | sum of square deviations: 2830820300.61245
[2025-04-14 08:13:48] 2025-04-14 12:13:32,227 | INFO     | sum of deviations: 376892188.32535934
[2025-04-14 08:13:48] 2025-04-14 12:13:32,228 | INFO     | mean x: 1744626402.0430622
[2025-04-14 08:13:48] 2025-04-14 12:13:32,228 | INFO     | mean y: 2474356.7416267944
[2025-04-14 08:13:48] 2025-04-14 12:13:32,228 | INFO     | -- intersect: -229803213.94484508
[2025-04-14 08:13:48] 2025-04-14 12:13:32,228 | INFO     | intersect: -229803213.94484508
[2025-04-14 08:13:48] 2025-04-14 12:13:32,228 | INFO     | chi2: 0.21389632261256353
[2025-04-14 08:13:48] 2025-04-14 12:13:32,228 | INFO     | current chi2=0.21389632261256353 (change=5.391303458333147 %)
[2025-04-14 08:13:48] 2025-04-14 12:13:32,228 | INFO     | left removable region: 50
[2025-04-14 08:13:48] 2025-04-14 12:13:32,228 | INFO     | sum of square deviations: 1748759814.0449524
[2025-04-14 08:13:48] 2025-04-14 12:13:32,245 | INFO     | sum of deviations: 4186405724.314607
[2025-04-14 08:13:48] 2025-04-14 12:13:32,246 | INFO     | mean x: 1744626981.550562
[2025-04-14 08:13:48] 2025-04-14 12:13:32,246 | INFO     | mean y: 2482252.353932584
[2025-04-14 08:13:48] 2025-04-14 12:13:32,246 | INFO     | -- intersect: -4174029767.0200686
[2025-04-14 08:13:48] 2025-04-14 12:13:32,246 | INFO     | intersect: -4174029767.0200686
[2025-04-14 08:13:48] 2025-04-14 12:13:32,246 | INFO     | chi2: 0.00017250229415546786
[2025-04-14 08:13:48] 2025-04-14 12:13:32,246 | INFO     | -- intersect: -4174029767.0200686
[2025-04-14 08:13:48] 2025-04-14 12:13:32,246 | INFO     | current memory leak: 2.39 B/s (using 178 data points, chi2=0.00)
[2025-04-14 08:13:48] 2025-04-14 12:13:32,247 | INFO     | ..............................
[2025-04-14 08:13:48] 2025-04-14 12:13:32,247 | INFO     | . Timing measurements:
[2025-04-14 08:13:48] 2025-04-14 12:13:32,247 | INFO     | . get job = 0 s
[2025-04-14 08:13:48] 2025-04-14 12:13:32,247 | INFO     | . initial setup = 5 s
[2025-04-14 08:13:48] 2025-04-14 12:13:32,247 | INFO     | . payload setup = 48 s
[2025-04-14 08:13:48] 2025-04-14 12:13:32,247 | INFO     | . stage-in = 0 s
[2025-04-14 08:13:48] 2025-04-14 12:13:32,247 | INFO     | . payload execution = 14305 s
[2025-04-14 08:13:48] 2025-04-14 12:13:32,247 | INFO     | . stage-out = 2 s
[2025-04-14 08:13:48] 2025-04-14 12:13:32,248 | INFO     | . log creation = 0 s
[2025-04-14 08:13:48] 2025-04-14 12:13:32,248 | INFO     | ..............................
[2025-04-14 08:13:48] 2025-04-14 12:13:32,778 | INFO     | 
[2025-04-14 08:13:48] 2025-04-14 12:13:32,778 | INFO     | job summary report
[2025-04-14 08:13:48] 2025-04-14 12:13:32,778 | INFO     | --------------------------------------------------
[2025-04-14 08:13:48] 2025-04-14 12:13:32,778 | INFO     | PanDA job id: 6600391076
[2025-04-14 08:13:48] 2025-04-14 12:13:32,779 | INFO     | task id: 44075164
[2025-04-14 08:13:48] 2025-04-14 12:13:32,779 | INFO     | errors: (none)
[2025-04-14 08:13:48] 2025-04-14 12:13:32,779 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-14 08:13:48] 2025-04-14 12:13:32,779 | INFO     | pilot state: finished 
[2025-04-14 08:13:48] 2025-04-14 12:13:32,779 | INFO     | transexitcode: 0
[2025-04-14 08:13:48] 2025-04-14 12:13:32,779 | INFO     | exeerrorcode: 0
[2025-04-14 08:13:48] 2025-04-14 12:13:32,779 | INFO     | exeerrordiag: 
[2025-04-14 08:13:48] 2025-04-14 12:13:32,779 | INFO     | exitcode: 0
[2025-04-14 08:13:48] 2025-04-14 12:13:32,779 | INFO     | exitmsg: OK
[2025-04-14 08:13:48] 2025-04-14 12:13:32,779 | INFO     | cpuconsumptiontime: 35359 s
[2025-04-14 08:13:48] 2025-04-14 12:13:32,779 | INFO     | nevents: 400
[2025-04-14 08:13:48] 2025-04-14 12:13:32,779 | INFO     | neventsw: 0
[2025-04-14 08:13:48] 2025-04-14 12:13:32,779 | INFO     | pid: 33244
[2025-04-14 08:13:48] 2025-04-14 12:13:32,779 | INFO     | pgrp: 33244
[2025-04-14 08:13:48] 2025-04-14 12:13:32,779 | INFO     | corecount: 8
[2025-04-14 08:13:48] 2025-04-14 12:13:32,780 | INFO     | event service: False
[2025-04-14 08:13:48] 2025-04-14 12:13:32,780 | INFO     | sizes: {0: 2416499, 1: 2417355, 2: 2417355, 12: 2417383, 23: 2417411, 34: 2417439, 38: 2417801, 45: 2417829, 14358: 2448506, 14360: 2457447, 14361: 2457503, 14391:
[2025-04-14 08:13:48] 2025-04-14 12:13:32,780 | INFO     | --------------------------------------------------
[2025-04-14 08:13:48] 2025-04-14 12:13:32,780 | INFO     | 
[2025-04-14 08:13:48] 2025-04-14 12:13:32,780 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-04-14 08:13:48] 2025-04-14 12:13:32,946 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-14 08:13:48] 2025-04-14 12:13:32,947 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-14 08:13:48] 2025-04-14 12:13:32,947 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-14 08:13:48] 2025-04-14 12:13:32,947 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-14 08:13:48] 2025-04-14 12:13:32,947 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-14 08:13:48] 2025-04-14 12:13:32,947 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-14 08:13:48] 2025-04-14 12:13:32,947 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-14 08:13:48] 2025-04-14 12:13:32,947 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-14 08:13:48] 2025-04-14 12:13:32,947 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-14 08:13:48] 2025-04-14 12:13:32,947 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-14 08:13:48] 2025-04-14 12:13:32,947 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-14 08:13:48] 2025-04-14 12:13:32,947 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-14 08:13:48] 2025-04-14 12:13:32,947 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-14 08:13:48] 2025-04-14 12:13:32,947 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-14 08:13:48] 2025-04-14 12:13:32,947 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-14 08:13:48] 2025-04-14 12:13:32,947 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-14 08:13:48] 2025-04-14 12:13:32,947 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-14 08:13:48] 2025-04-14 12:13:32,948 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-14 08:13:48] 2025-04-14 12:13:32,948 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-14 08:13:48] 2025-04-14 12:13:32,948 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-14 08:13:48] 2025-04-14 12:13:32,948 | INFO     | job 6600391076 has completed (purged errors)
[2025-04-14 08:13:48] 2025-04-14 12:13:32,948 | INFO     | overall cleanup function is called
[2025-04-14 08:13:48] 2025-04-14 12:13:33,960 | INFO     | --- collectZombieJob: --- 10, [33244]
[2025-04-14 08:13:48] 2025-04-14 12:13:33,960 | INFO     | zombie collector waiting for pid 33244
[2025-04-14 08:13:48] 2025-04-14 12:13:33,961 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-14 08:13:48] 2025-04-14 12:13:33,961 | INFO     | collected zombie processes
[2025-04-14 08:13:48] 2025-04-14 12:13:33,961 | INFO     | will attempt to kill all subprocesses of pid=33244
[2025-04-14 08:13:48] 2025-04-14 12:13:34,230 | INFO     | process IDs to be killed: [33244] (in reverse order)
[2025-04-14 08:13:48] 2025-04-14 12:13:34,426 | WARNING  | found no corresponding commands to process id(s)
[2025-04-14 08:13:48] 2025-04-14 12:13:34,426 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-14 08:13:48] 2025-04-14 12:13:34,436 | INFO     | did not find any defunct processes belonging to 33244
[2025-04-14 08:13:48] 2025-04-14 12:13:34,445 | INFO     | did not find any defunct processes belonging to 33244
[2025-04-14 08:13:48] 2025-04-14 12:13:34,446 | INFO     | ready for new job
[2025-04-14 08:13:48] 2025-04-14 12:13:34,446 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-14 08:13:48] 2025-04-14 12:13:34,447 | INFO     | **************************************
[2025-04-14 08:13:48] 2025-04-14 12:13:34,447 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-14 08:13:48] 2025-04-14 12:13:34,448 | INFO     | **************************************
[2025-04-14 08:13:48] 2025-04-14 12:13:34,448 | INFO     | 
[2025-04-14 08:13:48] 2025-04-14 12:13:34,452 | INFO     | architecture information:
[2025-04-14 08:13:48] 2025-04-14 12:13:34,460 | INFO     | executing command: cat /etc/os-release
[2025-04-14 08:13:48] 2025-04-14 12:13:34,551 | INFO     | cat /etc/os-release:
[2025-04-14 08:13:48] NAME="CentOS Linux"
[2025-04-14 08:13:48] VERSION="7 (Core)"
[2025-04-14 08:13:48] ID="centos"
[2025-04-14 08:13:48] ID_LIKE="rhel fedora"
[2025-04-14 08:13:48] VERSION_ID="7"
[2025-04-14 08:13:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-14 08:13:48] ANSI_COLOR="0;31"
[2025-04-14 08:13:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-14 08:13:48] HOME_URL="https://www.centos.org/"
[2025-04-14 08:13:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-14 08:13:48] 
[2025-04-14 08:13:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-14 08:13:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-14 08:13:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-14 08:13:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-14 08:13:48] 
[2025-04-14 08:13:48] 2025-04-14 12:13:34,551 | INFO     | **************************************
[2025-04-14 08:13:48] 2025-04-14 12:13:35,054 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-04-14 08:13:48] 2025-04-14 12:13:35,160 | INFO     | sufficient remaining disk space (103699972096 B)
[2025-04-14 08:13:48] 2025-04-14 12:13:35,160 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-14 08:13:48] 2025-04-14 12:13:35,160 | INFO     | current server update state: UPDATING_FINAL
[2025-04-14 08:13:48] 2025-04-14 12:13:35,160 | INFO     | update_server=False
[2025-04-14 08:13:48] 2025-04-14 12:13:35,160 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-14 08:13:48] 2025-04-14 12:13:35,160 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-14 08:13:48] 2025-04-14 12:13:35,253 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-14 08:13:48] 2025-04-14 12:13:35,253 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-14 08:13:48] 2025-04-14 12:13:35,258 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-14 08:13:48] 2025-04-14 12:13:35,258 | INFO     | will abort loop
[2025-04-14 08:13:48] 2025-04-14 12:13:35,351 | INFO     | all payload control threads have been joined
[2025-04-14 08:13:48] 2025-04-14 12:13:35,504 | INFO     | all data control threads have been joined
[2025-04-14 08:13:48] 2025-04-14 12:13:35,986 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-14 08:13:48] 2025-04-14 12:13:35,990 | INFO     | found 0 job(s) in 20 queues
[2025-04-14 08:13:48] 2025-04-14 12:13:35,990 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-14 08:13:48] 2025-04-14 12:13:35,991 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-14 08:13:48] 2025-04-14 12:13:36,166 | INFO     | [job] retrieve thread has finished
[2025-04-14 08:13:48] 2025-04-14 12:13:36,193 | INFO     | [payload] execute_payloads thread has finished
[2025-04-14 08:13:48] 2025-04-14 12:13:36,259 | INFO     | [job] validate thread has finished
[2025-04-14 08:13:48] 2025-04-14 12:13:36,259 | INFO     | [data] copytool_in thread has finished
[2025-04-14 08:13:48] 2025-04-14 12:13:36,264 | INFO     | [job] job monitor thread has finished
[2025-04-14 08:13:48] 2025-04-14 12:13:36,313 | INFO     | [payload] failed_post thread has finished
[2025-04-14 08:13:48] 2025-04-14 12:13:36,356 | INFO     | [payload] control thread has finished
[2025-04-14 08:13:48] 2025-04-14 12:13:36,461 | INFO     | [payload] validate_pre thread has finished
[2025-04-14 08:13:48] 2025-04-14 12:13:36,462 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-14 08:13:48] 2025-04-14 12:13:36,510 | INFO     | [data] control thread has finished
[2025-04-14 08:13:48] 2025-04-14 12:13:36,565 | INFO     | [job] create_data_payload thread has finished
[2025-04-14 08:13:48] 2025-04-14 12:13:36,705 | INFO     | all job control threads have been joined
[2025-04-14 08:13:48] 2025-04-14 12:13:37,116 | INFO     | [payload] validate_post thread has finished
[2025-04-14 08:13:48] 2025-04-14 12:13:37,167 | INFO     | [data] copytool_out thread has finished
[2025-04-14 08:13:48] 2025-04-14 12:13:37,711 | INFO     | [job] control thread has finished
[2025-04-14 08:13:48] 2025-04-14 12:13:37,720 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-14 08:13:48] 2025-04-14 12:13:38,726 | INFO     | [job] queue monitor thread has finished
[2025-04-14 08:13:48] 2025-04-14 12:13:39,994 | INFO     | [data] queue_monitor thread has finished
[2025-04-14 08:13:48] 2025-04-14 12:13:41,763 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140707173611328)>', '<ExcThread(monitor, started 140706576312064)>']
[2025-04-14 08:13:48] 2025-04-14 12:13:42,021 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-14 08:13:48] 2025-04-14 12:13:42,021 | INFO     | [monitor] control thread has ended
[2025-04-14 08:13:48] 2025-04-14 12:13:46,789 | INFO     | all workflow threads have been joined
[2025-04-14 08:13:48] 2025-04-14 12:13:46,789 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-14 08:13:48] 2025-04-14 12:13:46,793 | INFO     | traces error code: 0
[2025-04-14 08:13:48] 2025-04-14 12:13:46,793 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-14 08:13:48] 2025-04-14 12:13:47,117 [wrapper] ==== pilot stdout END ====
[2025-04-14 08:13:48] 2025-04-14 12:13:47,139 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-14 08:13:48] 2025-04-14 12:13:47,176 [wrapper] pilotpid: 86581
[2025-04-14 08:13:48] 2025-04-14 12:13:47,223 [wrapper] Pilot exit status: 0
[2025-04-14 08:13:48] 2025-04-14 12:13:47,313 [wrapper] pandaids: 6600391076
[2025-04-14 08:13:48] 2025-04-14 12:13:47,556 [wrapper] cleanup supervisor_pilot 24539 86582
[2025-04-14 08:13:48] 2025-04-14 12:13:47,604 [wrapper] Test setup, not cleaning
[2025-04-14 08:13:48] 2025-04-14 12:13:47,614 [wrapper] apfmon messages muted
[2025-04-14 08:13:48] 2025-04-14 12:13:47,657 [wrapper] ==== wrapper stdout END ====
[2025-04-14 08:13:48] 2025-04-14 12:13:47,702 [wrapper] ==== wrapper stderr END ====
[2025-04-14 08:13:48]  *** Error codes and diagnostics ***
[2025-04-14 08:13:48]     "exeErrorCode": 0,
[2025-04-14 08:13:48]     "exeErrorDiag": "",
[2025-04-14 08:13:48]     "pilotErrorCode": 0,
[2025-04-14 08:13:48]     "pilotErrorDiag": "",
[2025-04-14 08:13:48]  *** Listing of results directory ***
[2025-04-14 08:13:48] total 404840
[2025-04-14 08:13:48] -rw-r--r-- 1 boincer umatlas    495897 Apr 11 23:35 pilot3.tar.gz
[2025-04-14 08:13:48] -rw-r--r-- 1 boincer umatlas      5111 Apr 11 23:40 queuedata.json
[2025-04-14 08:13:48] -rwx------ 1 boincer umatlas     37140 Apr 11 23:41 runpilot2-wrapper.sh
[2025-04-14 08:13:48] -rw-r--r-- 1 boincer umatlas       100 Apr 14 04:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-14 08:13:48] -rwxr-xr-x 1 boincer umatlas      7986 Apr 14 04:10 run_atlas
[2025-04-14 08:13:48] -rw-r--r-- 1 boincer umatlas       105 Apr 14 04:10 job.xml
[2025-04-14 08:13:48] -rw-r--r-- 2 boincer umatlas 219776987 Apr 14 04:10 EVNT.44075162._001503.pool.root.1
[2025-04-14 08:13:48] -rw-r--r-- 2 boincer umatlas     17569 Apr 14 04:10 start_atlas.sh
[2025-04-14 08:13:48] drwxrwx--x 2 boincer umatlas      4096 Apr 14 04:10 shared
[2025-04-14 08:13:48] -rw-r--r-- 2 boincer umatlas    508882 Apr 14 04:10 input.tar.gz
[2025-04-14 08:13:48] -rw-r--r-- 1 boincer umatlas         0 Apr 14 04:10 boinc_lockfile
[2025-04-14 08:13:48] -rw-r--r-- 1 boincer umatlas      2550 Apr 14 04:10 pandaJob.out
[2025-04-14 08:13:48] -rw------- 1 boincer umatlas       467 Apr 14 04:10 setup.sh.local
[2025-04-14 08:13:48] -rw------- 1 boincer umatlas    981870 Apr 14 04:12 agis_schedconf.cvmfs.json
[2025-04-14 08:13:48] drwx------ 4 boincer umatlas      4096 Apr 14 04:12 pilot3
[2025-04-14 08:13:48] -rw-r--r-- 1 boincer umatlas      6388 Apr 14 08:10 init_data.xml
[2025-04-14 08:13:48] -rw------- 1 boincer umatlas 187654941 Apr 14 08:12 HITS.44075164._038871.pool.root.1
[2025-04-14 08:13:48] -rw-r--r-- 1 boincer umatlas       531 Apr 14 08:12 boinc_task_state.xml
[2025-04-14 08:13:48] -rw------- 1 boincer umatlas        95 Apr 14 08:12 pilot_heartbeat.json
[2025-04-14 08:13:48] -rw------- 1 boincer umatlas      1089 Apr 14 08:12 memory_monitor_summary.json
[2025-04-14 08:13:48] -rw------- 1 boincer umatlas   1603529 Apr 14 08:13 agis_ddmendpoints.agis.ALL.json
[2025-04-14 08:13:48] -rw------- 1 boincer umatlas    406862 Apr 14 08:13 log.44075164._038871.job.log.tgz.1
[2025-04-14 08:13:48] -rw------- 1 boincer umatlas      7770 Apr 14 08:13 heartbeat.json
[2025-04-14 08:13:48] -rw------- 1 boincer umatlas      4540 Apr 14 08:13 pilotlog.txt
[2025-04-14 08:13:48] -rw------- 1 boincer umatlas   1237851 Apr 14 08:13 log.44075164._038871.job.log.1
[2025-04-14 08:13:48] -rw-r--r-- 1 boincer umatlas      8192 Apr 14 08:13 boinc_mmap_file
[2025-04-14 08:13:48] -rw------- 1 boincer umatlas       357 Apr 14 08:13 output.list
[2025-04-14 08:13:48] -rw-r--r-- 1 boincer umatlas       620 Apr 14 08:13 runtime_log
[2025-04-14 08:13:48] -rw------- 1 boincer umatlas   1658880 Apr 14 08:13 result.tar.gz
[2025-04-14 08:13:48] -rw------- 1 boincer umatlas       662 Apr 14 08:13 X51MDmuvgN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm6TQLDmmlm0Um.diag
[2025-04-14 08:13:48] -rw-r--r-- 1 boincer umatlas     11414 Apr 14 08:13 runtime_log.err
[2025-04-14 08:13:48] -rw-r--r-- 1 boincer umatlas        28 Apr 14 08:13 wrapper_checkpoint.txt
[2025-04-14 08:13:48] -rw-r--r-- 1 boincer umatlas     20893 Apr 14 08:13 stderr.txt
[2025-04-14 08:13:48] HITS file was successfully produced:
[2025-04-14 08:13:48] -rw------- 1 boincer umatlas 187654941 Apr 14 08:12 shared/HITS.pool.root.1
[2025-04-14 08:13:48]  *** Contents of shared directory: ***
[2025-04-14 08:13:48] total 400032
[2025-04-14 08:13:48] -rw-r--r-- 2 boincer umatlas 219776987 Apr 14 04:10 ATLAS.root_0
[2025-04-14 08:13:48] -rw-r--r-- 2 boincer umatlas     17569 Apr 14 04:10 start_atlas.sh
[2025-04-14 08:13:48] -rw-r--r-- 2 boincer umatlas    508882 Apr 14 04:10 input.tar.gz
[2025-04-14 08:13:48] -rw------- 1 boincer umatlas 187654941 Apr 14 08:12 HITS.pool.root.1
[2025-04-14 08:13:48] -rw------- 1 boincer umatlas   1658880 Apr 14 08:13 result.tar.gz
08:13:50 (64067): run_atlas exited; CPU time 34943.611240
08:13:50 (64067): called boinc_finish(0)

</stderr_txt>
]]>

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