Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:13:28 (3248699): wrapper (7.7.26015): starting
04:13:28 (3248699): wrapper: running run_atlas (--nthreads 10)
[2025-04-14 04:13:28] Arguments: --nthreads 10
[2025-04-14 04:13:28] Threads: 10
[2025-04-14 04:13:28] Checking for CVMFS
[2025-04-14 04:13:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-14 04:13:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-14 04:13:29] Running cvmfs_config stat atlas.cern.ch
[2025-04-14 04:13:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-14 04:13:29] 2.12.6.0 1988508 147059 242824 144840 0 471 29394196 32935937 12982 130560 0 74195629 99.666 69421672 25082 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-14 04:13:29] CVMFS is ok
[2025-04-14 04:13:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-14 04:13:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-14 04:13:29] Further information can be found at the LHC@home message board.
[2025-04-14 04:13:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-14 04:13:29] Checking for apptainer binary...
[2025-04-14 04:13:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-14 04:13:29] Running /usr/bin/apptainer --version
[2025-04-14 04:13:29] apptainer version 1.4.0-1.el9
[2025-04-14 04:13:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-14 04:13:30] c-5-1.aglt2.org
[2025-04-14 04:13:30] apptainer works
[2025-04-14 04:13:30] Set ATHENA_PROC_NUMBER=10
[2025-04-14 04:13:30] Set ATHENA_CORE_NUMBER=10
[2025-04-14 04:13:30] Starting ATLAS job with PandaID=6600392350
[2025-04-14 04:13:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-14 11:24:03]  *** The last 200 lines of the pilot log: ***
[2025-04-14 11:24:03] 2025-04-14 15:23:47,991 | INFO     | sum of deviations: 350298496671.1234
[2025-04-14 11:24:03] 2025-04-14 15:23:47,991 | INFO     | mean x: 1744631377.3619049
[2025-04-14 11:24:03] 2025-04-14 15:23:47,991 | INFO     | mean y: 2126922.7952380953
[2025-04-14 11:24:03] 2025-04-14 15:23:47,991 | INFO     | -- intersect: -26603250239.41253
[2025-04-14 11:24:03] 2025-04-14 15:23:47,991 | INFO     | intersect: -26603250239.41253
[2025-04-14 11:24:03] 2025-04-14 15:23:47,993 | INFO     | chi2: 6.0454825169367625
[2025-04-14 11:24:03] 2025-04-14 15:23:47,994 | INFO     | sum of square deviations: 22159893934.443443
[2025-04-14 11:24:03] 2025-04-14 15:23:48,000 | INFO     | sum of deviations: 375048922376.5905
[2025-04-14 11:24:03] 2025-04-14 15:23:48,001 | INFO     | mean x: 1744631224.8650603
[2025-04-14 11:24:03] 2025-04-14 15:23:48,001 | INFO     | mean y: 2131542.3855421687
[2025-04-14 11:24:03] 2025-04-14 15:23:48,001 | INFO     | -- intersect: -29525178595.736095
[2025-04-14 11:24:03] 2025-04-14 15:23:48,001 | INFO     | intersect: -29525178595.736095
[2025-04-14 11:24:03] 2025-04-14 15:23:48,002 | INFO     | chi2: 5.3222785805592245
[2025-04-14 11:24:03] 2025-04-14 15:23:48,002 | INFO     | current chi2=5.3222785805592245 (change=11.962716530094019 %)
[2025-04-14 11:24:03] 2025-04-14 15:23:48,002 | INFO     | right removable region: 414
[2025-04-14 11:24:03] 2025-04-14 15:23:48,003 | INFO     | sum of square deviations: 22159749728.23136
[2025-04-14 11:24:03] 2025-04-14 15:23:48,008 | INFO     | sum of deviations: 256572047792.49637
[2025-04-14 11:24:03] 2025-04-14 15:23:48,008 | INFO     | mean x: 1744631529.8722892
[2025-04-14 11:24:03] 2025-04-14 15:23:48,008 | INFO     | mean y: 2144525.330120482
[2025-04-14 11:24:03] 2025-04-14 15:23:48,008 | INFO     | -- intersect: -20197708349.922333
[2025-04-14 11:24:03] 2025-04-14 15:23:48,009 | INFO     | intersect: -20197708349.922333
[2025-04-14 11:24:03] 2025-04-14 15:23:48,010 | INFO     | chi2: 3.527227919777107
[2025-04-14 11:24:03] 2025-04-14 15:23:48,011 | INFO     | current chi2=3.527227919777107 (change=41.65514646853452 %)
[2025-04-14 11:24:03] 2025-04-14 15:23:48,012 | INFO     | sum of square deviations: 21368191916.880527
[2025-04-14 11:24:03] 2025-04-14 15:23:48,036 | INFO     | sum of deviations: 192441885007.53174
[2025-04-14 11:24:03] 2025-04-14 15:23:48,036 | INFO     | mean x: 1744631682.382927
[2025-04-14 11:24:03] 2025-04-14 15:23:48,036 | INFO     | mean y: 2156876.9902439024
[2025-04-14 11:24:03] 2025-04-14 15:23:48,036 | INFO     | -- intersect: -15709991858.270903
[2025-04-14 11:24:03] 2025-04-14 15:23:48,036 | INFO     | intersect: -15709991858.270903
[2025-04-14 11:24:03] 2025-04-14 15:23:48,037 | INFO     | chi2: 2.5006583775588727
[2025-04-14 11:24:03] 2025-04-14 15:23:48,037 | INFO     | current chi2=2.5006583775588727 (change=29.104145395943267 %)
[2025-04-14 11:24:03] 2025-04-14 15:23:48,038 | INFO     | sum of square deviations: 20595729119.219715
[2025-04-14 11:24:03] 2025-04-14 15:23:48,044 | INFO     | sum of deviations: 133311555725.10616
[2025-04-14 11:24:03] 2025-04-14 15:23:48,045 | INFO     | mean x: 1744631834.8913581
[2025-04-14 11:24:03] 2025-04-14 15:23:48,045 | INFO     | mean y: 2168544.116049383
[2025-04-14 11:24:03] 2025-04-14 15:23:48,045 | INFO     | -- intersect: -11290443760.629827
[2025-04-14 11:24:03] 2025-04-14 15:23:48,045 | INFO     | intersect: -11290443760.629827
[2025-04-14 11:24:03] 2025-04-14 15:23:48,046 | INFO     | chi2: 1.6048893734599092
[2025-04-14 11:24:03] 2025-04-14 15:23:48,046 | INFO     | current chi2=1.6048893734599092 (change=35.82132658093856 %)
[2025-04-14 11:24:03] 2025-04-14 15:23:48,047 | INFO     | sum of square deviations: 19842103884.000053
[2025-04-14 11:24:03] 2025-04-14 15:23:48,056 | INFO     | sum of deviations: 101557826179.20003
[2025-04-14 11:24:03] 2025-04-14 15:23:48,061 | INFO     | mean x: 1744631987.4
[2025-04-14 11:24:03] 2025-04-14 15:23:48,062 | INFO     | mean y: 2174956.2925
[2025-04-14 11:24:03] 2025-04-14 15:23:48,062 | INFO     | -- intersect: -8927373702.401592
[2025-04-14 11:24:03] 2025-04-14 15:23:48,062 | INFO     | intersect: -8927373702.401592
[2025-04-14 11:24:03] 2025-04-14 15:23:48,063 | INFO     | chi2: 1.3477519103665943
[2025-04-14 11:24:03] 2025-04-14 15:23:48,063 | INFO     | current chi2=1.3477519103665943 (change=16.022130082334822 %)
[2025-04-14 11:24:03] 2025-04-14 15:23:48,063 | INFO     | left removable region: 40
[2025-04-14 11:24:03] 2025-04-14 15:23:48,064 | INFO     | sum of square deviations: 16218562240.556149
[2025-04-14 11:24:03] 2025-04-14 15:23:48,067 | INFO     | sum of deviations: 70070310061.29944
[2025-04-14 11:24:03] 2025-04-14 15:23:48,068 | INFO     | mean x: 1744632414.3850267
[2025-04-14 11:24:03] 2025-04-14 15:23:48,068 | INFO     | mean y: 2193146.053475936
[2025-04-14 11:24:03] 2025-04-14 15:23:48,068 | INFO     | -- intersect: -7535277340.279861
[2025-04-14 11:24:03] 2025-04-14 15:23:48,068 | INFO     | intersect: -7535277340.279861
[2025-04-14 11:24:03] 2025-04-14 15:23:48,069 | INFO     | chi2: 0.24708495728551075
[2025-04-14 11:24:03] 2025-04-14 15:23:48,069 | INFO     | -- intersect: -7535277340.279861
[2025-04-14 11:24:03] 2025-04-14 15:23:48,070 | INFO     | current memory leak: 4.32 B/s (using 374 data points, chi2=0.25)
[2025-04-14 11:24:03] 2025-04-14 15:23:48,092 | INFO     | ..............................
[2025-04-14 11:24:03] 2025-04-14 15:23:48,093 | INFO     | . Timing measurements:
[2025-04-14 11:24:03] 2025-04-14 15:23:48,093 | INFO     | . get job = 0 s
[2025-04-14 11:24:03] 2025-04-14 15:23:48,093 | INFO     | . initial setup = 6 s
[2025-04-14 11:24:03] 2025-04-14 15:23:48,093 | INFO     | . payload setup = 31 s
[2025-04-14 11:24:03] 2025-04-14 15:23:48,093 | INFO     | . stage-in = 0 s
[2025-04-14 11:24:03] 2025-04-14 15:23:48,094 | INFO     | . payload execution = 25617 s
[2025-04-14 11:24:03] 2025-04-14 15:23:48,094 | INFO     | . stage-out = 6 s
[2025-04-14 11:24:03] 2025-04-14 15:23:48,094 | INFO     | . log creation = 0 s
[2025-04-14 11:24:03] 2025-04-14 15:23:48,094 | INFO     | ..............................
[2025-04-14 11:24:03] 2025-04-14 15:23:48,830 | INFO     | 
[2025-04-14 11:24:03] 2025-04-14 15:23:48,830 | INFO     | job summary report
[2025-04-14 11:24:03] 2025-04-14 15:23:48,831 | INFO     | --------------------------------------------------
[2025-04-14 11:24:03] 2025-04-14 15:23:48,831 | INFO     | PanDA job id: 6600392350
[2025-04-14 11:24:03] 2025-04-14 15:23:48,831 | INFO     | task id: 44075164
[2025-04-14 11:24:03] 2025-04-14 15:23:48,831 | INFO     | errors: (none)
[2025-04-14 11:24:03] 2025-04-14 15:23:48,831 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-14 11:24:03] 2025-04-14 15:23:48,831 | INFO     | pilot state: finished 
[2025-04-14 11:24:03] 2025-04-14 15:23:48,831 | INFO     | transexitcode: 0
[2025-04-14 11:24:03] 2025-04-14 15:23:48,832 | INFO     | exeerrorcode: 0
[2025-04-14 11:24:03] 2025-04-14 15:23:48,832 | INFO     | exeerrordiag: 
[2025-04-14 11:24:03] 2025-04-14 15:23:48,832 | INFO     | exitcode: 0
[2025-04-14 11:24:03] 2025-04-14 15:23:48,832 | INFO     | exitmsg: OK
[2025-04-14 11:24:03] 2025-04-14 15:23:48,832 | INFO     | cpuconsumptiontime: 47555 s
[2025-04-14 11:24:03] 2025-04-14 15:23:48,834 | INFO     | nevents: 400
[2025-04-14 11:24:03] 2025-04-14 15:23:48,834 | INFO     | neventsw: 0
[2025-04-14 11:24:03] 2025-04-14 15:23:48,834 | INFO     | pid: 3263955
[2025-04-14 11:24:03] 2025-04-14 15:23:48,835 | INFO     | pgrp: 3263955
[2025-04-14 11:24:03] 2025-04-14 15:23:48,835 | INFO     | corecount: 10
[2025-04-14 11:24:03] 2025-04-14 15:23:48,835 | INFO     | event service: False
[2025-04-14 11:24:03] 2025-04-14 15:23:48,835 | INFO     | sizes: {0: 2416499, 1: 2417184, 2: 2417184, 3: 2417411, 4: 2417411, 15: 2417439, 26: 2417595, 33: 2417829, 37: 2417885, 25655: 2452532, 25663: 2461473, 25664: 2461
[2025-04-14 11:24:03] 2025-04-14 15:23:48,835 | INFO     | --------------------------------------------------
[2025-04-14 11:24:03] 2025-04-14 15:23:48,835 | INFO     | 
[2025-04-14 11:24:03] 2025-04-14 15:23:48,835 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-14 11:24:03] 2025-04-14 15:23:48,882 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-14 11:24:03] 2025-04-14 15:23:48,883 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-14 11:24:03] 2025-04-14 15:23:48,883 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-14 11:24:03] 2025-04-14 15:23:48,883 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-14 11:24:03] 2025-04-14 15:23:48,883 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-14 11:24:03] 2025-04-14 15:23:48,883 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-14 11:24:03] 2025-04-14 15:23:48,883 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-14 11:24:03] 2025-04-14 15:23:48,883 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-14 11:24:03] 2025-04-14 15:23:48,883 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-14 11:24:03] 2025-04-14 15:23:48,884 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-14 11:24:03] 2025-04-14 15:23:48,884 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-14 11:24:03] 2025-04-14 15:23:48,884 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-14 11:24:03] 2025-04-14 15:23:48,884 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-14 11:24:03] 2025-04-14 15:23:48,884 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-14 11:24:03] 2025-04-14 15:23:48,884 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-14 11:24:03] 2025-04-14 15:23:48,885 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-14 11:24:03] 2025-04-14 15:23:48,885 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-14 11:24:03] 2025-04-14 15:23:48,885 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-14 11:24:03] 2025-04-14 15:23:48,885 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-14 11:24:03] 2025-04-14 15:23:48,885 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-14 11:24:03] 2025-04-14 15:23:48,885 | INFO     | job 6600392350 has completed (purged errors)
[2025-04-14 11:24:03] 2025-04-14 15:23:48,885 | INFO     | overall cleanup function is called
[2025-04-14 11:24:03] 2025-04-14 15:23:49,902 | INFO     | --- collectZombieJob: --- 10, [3263955]
[2025-04-14 11:24:03] 2025-04-14 15:23:49,904 | INFO     | zombie collector waiting for pid 3263955
[2025-04-14 11:24:03] 2025-04-14 15:23:49,904 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-14 11:24:03] 2025-04-14 15:23:49,904 | INFO     | collected zombie processes
[2025-04-14 11:24:03] 2025-04-14 15:23:49,904 | INFO     | will attempt to kill all subprocesses of pid=3263955
[2025-04-14 11:24:03] 2025-04-14 15:23:51,310 | INFO     | process IDs to be killed: [3263955] (in reverse order)
[2025-04-14 11:24:03] 2025-04-14 15:23:51,689 | WARNING  | found no corresponding commands to process id(s)
[2025-04-14 11:24:03] 2025-04-14 15:23:51,703 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-14 11:24:03] 2025-04-14 15:23:51,881 | INFO     | did not find any defunct processes belonging to 3263955
[2025-04-14 11:24:03] 2025-04-14 15:23:51,914 | INFO     | did not find any defunct processes belonging to 3263955
[2025-04-14 11:24:03] 2025-04-14 15:23:51,915 | INFO     | ready for new job
[2025-04-14 11:24:03] 2025-04-14 15:23:51,915 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-14 11:24:03] 2025-04-14 15:23:51,917 | INFO     | **************************************
[2025-04-14 11:24:03] 2025-04-14 15:23:51,918 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-14 11:24:03] 2025-04-14 15:23:51,918 | INFO     | **************************************
[2025-04-14 11:24:03] 2025-04-14 15:23:51,918 | INFO     | 
[2025-04-14 11:24:03] 2025-04-14 15:23:51,934 | INFO     | architecture information:
[2025-04-14 11:24:03] 2025-04-14 15:23:51,935 | INFO     | executing command: cat /etc/os-release
[2025-04-14 11:24:03] 2025-04-14 15:23:51,963 | INFO     | cat /etc/os-release:
[2025-04-14 11:24:03] NAME="CentOS Linux"
[2025-04-14 11:24:03] VERSION="7 (Core)"
[2025-04-14 11:24:03] ID="centos"
[2025-04-14 11:24:03] ID_LIKE="rhel fedora"
[2025-04-14 11:24:03] VERSION_ID="7"
[2025-04-14 11:24:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-14 11:24:03] ANSI_COLOR="0;31"
[2025-04-14 11:24:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-14 11:24:03] HOME_URL="https://www.centos.org/"
[2025-04-14 11:24:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-14 11:24:03] 
[2025-04-14 11:24:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-14 11:24:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-14 11:24:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-14 11:24:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-14 11:24:03] 
[2025-04-14 11:24:03] 2025-04-14 15:23:51,964 | INFO     | **************************************
[2025-04-14 11:24:03] 2025-04-14 15:23:52,470 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-14 11:24:03] 2025-04-14 15:23:52,510 | INFO     | sufficient remaining disk space (75911659520 B)
[2025-04-14 11:24:03] 2025-04-14 15:23:52,511 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-14 11:24:03] 2025-04-14 15:23:52,511 | INFO     | current server update state: UPDATING_FINAL
[2025-04-14 11:24:03] 2025-04-14 15:23:52,511 | INFO     | update_server=False
[2025-04-14 11:24:03] 2025-04-14 15:23:52,511 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-14 11:24:03] 2025-04-14 15:23:52,511 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-14 11:24:03] 2025-04-14 15:23:52,512 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-14 11:24:03] 2025-04-14 15:23:52,512 | INFO     | found 0 job(s) in 20 queues
[2025-04-14 11:24:03] 2025-04-14 15:23:52,512 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-14 11:24:03] 2025-04-14 15:23:52,512 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-14 11:24:03] 2025-04-14 15:23:52,516 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-14 11:24:03] 2025-04-14 15:23:52,652 | INFO     | all data control threads have been joined
[2025-04-14 11:24:03] 2025-04-14 15:23:53,258 | INFO     | all payload control threads have been joined
[2025-04-14 11:24:03] 2025-04-14 15:23:53,460 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-14 11:24:03] 2025-04-14 15:23:53,460 | INFO     | aborting loop
[2025-04-14 11:24:03] 2025-04-14 15:23:53,520 | INFO     | [job] retrieve thread has finished
[2025-04-14 11:24:03] 2025-04-14 15:23:53,567 | INFO     | [job] validate thread has finished
[2025-04-14 11:24:03] 2025-04-14 15:23:53,599 | INFO     | [payload] validate_post thread has finished
[2025-04-14 11:24:03] 2025-04-14 15:23:53,660 | INFO     | [data] control thread has finished
[2025-04-14 11:24:03] 2025-04-14 15:23:53,718 | INFO     | all job control threads have been joined
[2025-04-14 11:24:03] 2025-04-14 15:23:53,839 | INFO     | [data] copytool_in thread has finished
[2025-04-14 11:24:03] 2025-04-14 15:23:53,927 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-14 11:24:03] 2025-04-14 15:23:54,264 | INFO     | [payload] control thread has finished
[2025-04-14 11:24:03] 2025-04-14 15:23:54,430 | INFO     | [payload] validate_pre thread has finished
[2025-04-14 11:24:03] 2025-04-14 15:23:54,459 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-14 11:24:03] 2025-04-14 15:23:54,465 | INFO     | [job] job monitor thread has finished
[2025-04-14 11:24:03] 2025-04-14 15:23:54,517 | INFO     | [payload] execute_payloads thread has finished
[2025-04-14 11:24:03] 2025-04-14 15:23:54,518 | INFO     | [job] create_data_payload thread has finished
[2025-04-14 11:24:03] 2025-04-14 15:23:54,518 | INFO     | [data] copytool_out thread has finished
[2025-04-14 11:24:03] 2025-04-14 15:23:54,546 | INFO     | [payload] failed_post thread has finished
[2025-04-14 11:24:03] 2025-04-14 15:23:54,725 | INFO     | [job] control thread has finished
[2025-04-14 11:24:03] 2025-04-14 15:23:54,932 | INFO     | [job] queue monitor thread has finished
[2025-04-14 11:24:03] 2025-04-14 15:23:56,529 | INFO     | [data] queue_monitor thread has finished
[2025-04-14 11:24:03] 2025-04-14 15:23:56,832 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140467318495040)>', '<ExcThread(monitor, started 140466804733696)>']
[2025-04-14 11:24:03] 2025-04-14 15:23:57,566 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-14 11:24:03] 2025-04-14 15:23:57,566 | INFO     | [monitor] control thread has ended
[2025-04-14 11:24:03] 2025-04-14 15:24:01,867 | INFO     | all workflow threads have been joined
[2025-04-14 11:24:03] 2025-04-14 15:24:01,867 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-14 11:24:03] 2025-04-14 15:24:01,868 | INFO     | traces error code: 0
[2025-04-14 11:24:03] 2025-04-14 15:24:01,868 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-14 11:24:03] 2025-04-14 15:24:02,433 [wrapper] ==== pilot stdout END ====
[2025-04-14 11:24:03] 2025-04-14 15:24:02,476 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-14 11:24:03] 2025-04-14 15:24:02,514 [wrapper] pilotpid: 3254400
[2025-04-14 11:24:03] 2025-04-14 15:24:02,540 [wrapper] Pilot exit status: 0
[2025-04-14 11:24:03] 2025-04-14 15:24:02,650 [wrapper] pandaids: 6600392350
[2025-04-14 11:24:03] 2025-04-14 15:24:02,873 [wrapper] cleanup supervisor_pilot 2018319 3254401
[2025-04-14 11:24:03] 2025-04-14 15:24:02,881 [wrapper] Test setup, not cleaning
[2025-04-14 11:24:03] 2025-04-14 15:24:02,905 [wrapper] apfmon messages muted
[2025-04-14 11:24:03] 2025-04-14 15:24:02,937 [wrapper] ==== wrapper stdout END ====
[2025-04-14 11:24:03] 2025-04-14 15:24:02,995 [wrapper] ==== wrapper stderr END ====
[2025-04-14 11:24:03]  *** Error codes and diagnostics ***
[2025-04-14 11:24:03]     "exeErrorCode": 0,
[2025-04-14 11:24:03]     "exeErrorDiag": "",
[2025-04-14 11:24:03]     "pilotErrorCode": 0,
[2025-04-14 11:24:03]     "pilotErrorDiag": "",
[2025-04-14 11:24:03]  *** Listing of results directory ***
[2025-04-14 11:24:03] total 401864
[2025-04-14 11:24:03] -rw-r--r--. 1 boincer umatlas    495897 Apr 12 00:31 pilot3.tar.gz
[2025-04-14 11:24:03] -rw-r--r--. 1 boincer umatlas      5111 Apr 12 00:45 queuedata.json
[2025-04-14 11:24:03] -rwx------. 1 boincer umatlas     37140 Apr 12 00:46 runpilot2-wrapper.sh
[2025-04-14 11:24:03] -rw-r--r--. 1 boincer umatlas       100 Apr 14 04:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-14 11:24:03] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 14 04:13 run_atlas
[2025-04-14 11:24:03] -rw-r--r--. 1 boincer umatlas       105 Apr 14 04:13 job.xml
[2025-04-14 11:24:03] -rw-r--r--. 2 boincer umatlas 219926624 Apr 14 04:13 EVNT.44075162._001532.pool.root.1
[2025-04-14 11:24:03] -rw-r--r--. 2 boincer umatlas     17569 Apr 14 04:13 start_atlas.sh
[2025-04-14 11:24:03] drwxrwx--x. 2 boincer umatlas      4096 Apr 14 04:13 shared
[2025-04-14 11:24:03] -rw-r--r--. 2 boincer umatlas    508885 Apr 14 04:13 input.tar.gz
[2025-04-14 11:24:03] -rw-r--r--. 1 boincer umatlas         0 Apr 14 04:13 boinc_lockfile
[2025-04-14 11:24:03] -rw-r--r--. 1 boincer umatlas      2550 Apr 14 04:13 pandaJob.out
[2025-04-14 11:24:03] -rw-------. 1 boincer umatlas       467 Apr 14 04:13 setup.sh.local
[2025-04-14 11:24:03] -rw-------. 1 boincer umatlas    981874 Apr 14 04:14 agis_schedconf.cvmfs.json
[2025-04-14 11:24:03] drwx------. 4 boincer umatlas      4096 Apr 14 04:14 pilot3
[2025-04-14 11:24:03] -rw-r--r--. 1 boincer umatlas      6673 Apr 14 11:18 init_data.xml
[2025-04-14 11:24:03] -rw-------. 1 boincer umatlas 183011287 Apr 14 11:21 HITS.44075164._039593.pool.root.1
[2025-04-14 11:24:03] -rw-r--r--. 1 boincer umatlas       531 Apr 14 11:21 boinc_task_state.xml
[2025-04-14 11:24:03] -rw-------. 1 boincer umatlas      1043 Apr 14 11:22 memory_monitor_summary.json
[2025-04-14 11:24:03] -rw-------. 1 boincer umatlas   1603529 Apr 14 11:23 agis_ddmendpoints.agis.ALL.json
[2025-04-14 11:24:03] -rw-------. 1 boincer umatlas        95 Apr 14 11:23 pilot_heartbeat.json
[2025-04-14 11:24:03] -rw-------. 1 boincer umatlas    509704 Apr 14 11:23 log.44075164._039593.job.log.tgz.1
[2025-04-14 11:24:03] -rw-------. 1 boincer umatlas      7721 Apr 14 11:23 heartbeat.json
[2025-04-14 11:24:03] -rw-r--r--. 1 boincer umatlas      8192 Apr 14 11:24 boinc_mmap_file
[2025-04-14 11:24:03] -rw-------. 1 boincer umatlas      4476 Apr 14 11:24 pilotlog.txt
[2025-04-14 11:24:03] -rw-r--r--. 1 boincer umatlas        28 Apr 14 11:24 wrapper_checkpoint.txt
[2025-04-14 11:24:03] -rw-------. 1 boincer umatlas   1852478 Apr 14 11:24 log.44075164._039593.job.log.1
[2025-04-14 11:24:03] -rw-------. 1 boincer umatlas       357 Apr 14 11:24 output.list
[2025-04-14 11:24:03] -rw-r--r--. 1 boincer umatlas       620 Apr 14 11:24 runtime_log
[2025-04-14 11:24:03] -rw-------. 1 boincer umatlas   2385920 Apr 14 11:24 result.tar.gz
[2025-04-14 11:24:03] -rw-r--r--. 1 boincer umatlas     11406 Apr 14 11:24 runtime_log.err
[2025-04-14 11:24:03] -rw-------. 1 boincer umatlas       654 Apr 14 11:24 0UqMDmxvhN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmvbQLDmb1Xpam.diag
[2025-04-14 11:24:03] -rw-r--r--. 1 boincer umatlas     20896 Apr 14 11:24 stderr.txt
[2025-04-14 11:24:03] HITS file was successfully produced:
[2025-04-14 11:24:03] -rw-------. 1 boincer umatlas 183011287 Apr 14 11:21 shared/HITS.pool.root.1
[2025-04-14 11:24:03]  *** Contents of shared directory: ***
[2025-04-14 11:24:03] total 396356
[2025-04-14 11:24:03] -rw-r--r--. 2 boincer umatlas 219926624 Apr 14 04:13 ATLAS.root_0
[2025-04-14 11:24:03] -rw-r--r--. 2 boincer umatlas     17569 Apr 14 04:13 start_atlas.sh
[2025-04-14 11:24:03] -rw-r--r--. 2 boincer umatlas    508885 Apr 14 04:13 input.tar.gz
[2025-04-14 11:24:03] -rw-------. 1 boincer umatlas 183011287 Apr 14 11:21 HITS.pool.root.1
[2025-04-14 11:24:03] -rw-------. 1 boincer umatlas   2385920 Apr 14 11:24 result.tar.gz
11:24:04 (3248699): run_atlas exited; CPU time 48670.987764
11:24:04 (3248699): called boinc_finish(0)

</stderr_txt>
]]>

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