Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:53:37 (30737): wrapper (7.7.26015): starting
02:53:37 (30737): wrapper: running run_atlas (--nthreads 12)
[2025-04-14 02:53:37] Arguments: --nthreads 12
[2025-04-14 02:53:37] Threads: 12
[2025-04-14 02:53:37] Checking for CVMFS
[2025-04-14 02:53:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-14 02:53:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-14 02:53:37] Running cvmfs_config stat atlas.cern.ch
[2025-04-14 02:53:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-14 02:53:37] 2.11.2.0 24713 219345 91808 144839 3 304 16389316 18432001 4743 130560 0 20255445 99.358 34467170 39753 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-14 02:53:37] CVMFS is ok
[2025-04-14 02:53:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-14 02:53:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-14 02:53:37] Further information can be found at the LHC@home message board.
[2025-04-14 02:53:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-14 02:53:37] Checking for apptainer binary...
[2025-04-14 02:53:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-14 02:53:37] Running /usr/bin/apptainer --version
[2025-04-14 02:53:39] apptainer version 1.3.2-1.el7
[2025-04-14 02:53:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-14 02:53:42] c-206-3.aglt2.org
[2025-04-14 02:53:42] apptainer works
[2025-04-14 02:53:43] Set ATHENA_PROC_NUMBER=12
[2025-04-14 02:53:43] Set ATHENA_CORE_NUMBER=12
[2025-04-14 02:53:43] Starting ATLAS job with PandaID=6602113362
[2025-04-14 02:53:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-14 10:14:12]  *** The last 200 lines of the pilot log: ***
[2025-04-14 10:14:12] 2025-04-14 14:13:52,012 | INFO     | intersect: -20366599231.383236
[2025-04-14 10:14:12] 2025-04-14 14:13:52,013 | INFO     | chi2: 6.705464972076646
[2025-04-14 10:14:12] 2025-04-14 14:13:52,014 | INFO     | sum of square deviations: 24142390068.580795
[2025-04-14 10:14:12] 2025-04-14 14:13:52,021 | INFO     | sum of deviations: 349693283498.3679
[2025-04-14 10:14:12] 2025-04-14 14:13:52,021 | INFO     | mean x: 1744626673.4800937
[2025-04-14 10:14:12] 2025-04-14 14:13:52,021 | INFO     | mean y: 2610107.8079625294
[2025-04-14 10:14:12] 2025-04-14 14:13:52,021 | INFO     | -- intersect: -25267639780.253456
[2025-04-14 10:14:12] 2025-04-14 14:13:52,022 | INFO     | intersect: -25267639780.253456
[2025-04-14 10:14:12] 2025-04-14 14:13:52,023 | INFO     | chi2: 5.087348271269052
[2025-04-14 10:14:12] 2025-04-14 14:13:52,023 | INFO     | current chi2=5.087348271269052 (change=24.131312407802675 %)
[2025-04-14 10:14:12] 2025-04-14 14:13:52,023 | INFO     | right removable region: 426
[2025-04-14 10:14:12] 2025-04-14 14:13:52,024 | INFO     | sum of square deviations: 24142265018.580795
[2025-04-14 10:14:12] 2025-04-14 14:13:52,030 | INFO     | sum of deviations: 168455159209.1286
[2025-04-14 10:14:12] 2025-04-14 14:13:52,031 | INFO     | mean x: 1744626978.4800937
[2025-04-14 10:14:12] 2025-04-14 14:13:52,031 | INFO     | mean y: 2621821.7798594846
[2025-04-14 10:14:12] 2025-04-14 14:13:52,032 | INFO     | -- intersect: -12170693945.991528
[2025-04-14 10:14:12] 2025-04-14 14:13:52,032 | INFO     | intersect: -12170693945.991528
[2025-04-14 10:14:12] 2025-04-14 14:13:52,033 | INFO     | chi2: 3.9070843932173105
[2025-04-14 10:14:12] 2025-04-14 14:13:52,033 | INFO     | current chi2=3.9070843932173105 (change=41.732834195876684 %)
[2025-04-14 10:14:12] 2025-04-14 14:13:52,034 | INFO     | sum of square deviations: 23304037939.9146
[2025-04-14 10:14:12] 2025-04-14 14:13:52,039 | INFO     | sum of deviations: 79623496412.22269
[2025-04-14 10:14:12] 2025-04-14 14:13:52,040 | INFO     | mean x: 1744627130.985782
[2025-04-14 10:14:12] 2025-04-14 14:13:52,040 | INFO     | mean y: 2637983.7037914693
[2025-04-14 10:14:12] 2025-04-14 14:13:52,040 | INFO     | -- intersect: -5958273703.055238
[2025-04-14 10:14:12] 2025-04-14 14:13:52,040 | INFO     | intersect: -5958273703.055238
[2025-04-14 10:14:12] 2025-04-14 14:13:52,041 | INFO     | chi2: 2.5821628301616273
[2025-04-14 10:14:12] 2025-04-14 14:13:52,041 | INFO     | current chi2=2.5821628301616273 (change=33.91074852019434 %)
[2025-04-14 10:14:12] 2025-04-14 14:13:52,041 | INFO     | sum of square deviations: 22485439136.22039
[2025-04-14 10:14:12] 2025-04-14 14:13:52,046 | INFO     | sum of deviations: 12696561456.24699
[2025-04-14 10:14:12] 2025-04-14 14:13:52,047 | INFO     | mean x: 1744627283.4916067
[2025-04-14 10:14:12] 2025-04-14 14:13:52,047 | INFO     | mean y: 2650425.213429257
[2025-04-14 10:14:12] 2025-04-14 14:13:52,047 | INFO     | -- intersect: -982465648.7446345
[2025-04-14 10:14:12] 2025-04-14 14:13:52,047 | INFO     | intersect: -982465648.7446345
[2025-04-14 10:14:12] 2025-04-14 14:13:52,048 | INFO     | chi2: 1.7342960217051329
[2025-04-14 10:14:12] 2025-04-14 14:13:52,048 | INFO     | current chi2=1.7342960217051329 (change=32.83552836222274 %)
[2025-04-14 10:14:12] 2025-04-14 14:13:52,049 | INFO     | sum of square deviations: 21686236044.99754
[2025-04-14 10:14:12] 2025-04-14 14:13:52,053 | INFO     | sum of deviations: -3697999366.706356
[2025-04-14 10:14:12] 2025-04-14 14:13:52,054 | INFO     | mean x: 1744627435.997573
[2025-04-14 10:14:12] 2025-04-14 14:13:52,054 | INFO     | mean y: 2653551.2936893203
[2025-04-14 10:14:12] 2025-04-14 14:13:52,054 | INFO     | -- intersect: 300152441.3763593
[2025-04-14 10:14:12] 2025-04-14 14:13:52,054 | INFO     | intersect: 300152441.3763593
[2025-04-14 10:14:12] 2025-04-14 14:13:52,055 | INFO     | chi2: 1.6931436962092088
[2025-04-14 10:14:12] 2025-04-14 14:13:52,055 | INFO     | current chi2=1.6931436962092088 (change=2.372854748029909 %)
[2025-04-14 10:14:12] 2025-04-14 14:13:52,055 | INFO     | left removable region: 40
[2025-04-14 10:14:12] 2025-04-14 14:13:52,055 | INFO     | sum of square deviations: 17834241557.74094
[2025-04-14 10:14:12] 2025-04-14 14:13:52,060 | INFO     | sum of deviations: 35237657069.378265
[2025-04-14 10:14:12] 2025-04-14 14:13:52,060 | INFO     | mean x: 1744627863.0259068
[2025-04-14 10:14:12] 2025-04-14 14:13:52,061 | INFO     | mean y: 2668881.0621761656
[2025-04-14 10:14:12] 2025-04-14 14:13:52,061 | INFO     | -- intersect: -3444441451.7181525
[2025-04-14 10:14:12] 2025-04-14 14:13:52,061 | INFO     | intersect: -3444441451.7181525
[2025-04-14 10:14:12] 2025-04-14 14:13:52,062 | INFO     | chi2: 0.0014649792555395309
[2025-04-14 10:14:12] 2025-04-14 14:13:52,062 | INFO     | -- intersect: -3444441451.7181525
[2025-04-14 10:14:12] 2025-04-14 14:13:52,062 | INFO     | current memory leak: 1.98 B/s (using 386 data points, chi2=0.00)
[2025-04-14 10:14:12] 2025-04-14 14:13:52,064 | INFO     | ..............................
[2025-04-14 10:14:12] 2025-04-14 14:13:52,064 | INFO     | . Timing measurements:
[2025-04-14 10:14:12] 2025-04-14 14:13:52,064 | INFO     | . get job = 0 s
[2025-04-14 10:14:12] 2025-04-14 14:13:52,064 | INFO     | . initial setup = 3 s
[2025-04-14 10:14:12] 2025-04-14 14:13:52,064 | INFO     | . payload setup = 11 s
[2025-04-14 10:14:12] 2025-04-14 14:13:52,064 | INFO     | . stage-in = 0 s
[2025-04-14 10:14:12] 2025-04-14 14:13:52,065 | INFO     | . payload execution = 26336 s
[2025-04-14 10:14:12] 2025-04-14 14:13:52,065 | INFO     | . stage-out = 4 s
[2025-04-14 10:14:12] 2025-04-14 14:13:52,065 | INFO     | . log creation = 0 s
[2025-04-14 10:14:12] 2025-04-14 14:13:52,065 | INFO     | ..............................
[2025-04-14 10:14:12] 2025-04-14 14:13:52,224 | INFO     | 
[2025-04-14 10:14:12] 2025-04-14 14:13:52,268 | INFO     | job summary report
[2025-04-14 10:14:12] 2025-04-14 14:13:52,268 | INFO     | --------------------------------------------------
[2025-04-14 10:14:12] 2025-04-14 14:13:52,268 | INFO     | PanDA job id: 6602113362
[2025-04-14 10:14:12] 2025-04-14 14:13:52,269 | INFO     | task id: 44075483
[2025-04-14 10:14:12] 2025-04-14 14:13:52,269 | INFO     | errors: (none)
[2025-04-14 10:14:12] 2025-04-14 14:13:52,269 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-14 10:14:12] 2025-04-14 14:13:52,269 | INFO     | pilot state: finished 
[2025-04-14 10:14:12] 2025-04-14 14:13:52,269 | INFO     | transexitcode: 0
[2025-04-14 10:14:12] 2025-04-14 14:13:52,269 | INFO     | exeerrorcode: 0
[2025-04-14 10:14:12] 2025-04-14 14:13:52,269 | INFO     | exeerrordiag: 
[2025-04-14 10:14:12] 2025-04-14 14:13:52,270 | INFO     | exitcode: 0
[2025-04-14 10:14:12] 2025-04-14 14:13:52,287 | INFO     | exitmsg: OK
[2025-04-14 10:14:12] 2025-04-14 14:13:52,287 | INFO     | cpuconsumptiontime: 93829 s
[2025-04-14 10:14:12] 2025-04-14 14:13:52,288 | INFO     | nevents: 400
[2025-04-14 10:14:12] 2025-04-14 14:13:52,288 | INFO     | neventsw: 0
[2025-04-14 10:14:12] 2025-04-14 14:13:52,289 | INFO     | pid: 9822
[2025-04-14 10:14:12] 2025-04-14 14:13:52,290 | INFO     | pgrp: 9822
[2025-04-14 10:14:12] 2025-04-14 14:13:52,290 | INFO     | corecount: 12
[2025-04-14 10:14:12] 2025-04-14 14:13:52,290 | INFO     | event service: False
[2025-04-14 10:14:12] 2025-04-14 14:13:52,291 | INFO     | sizes: {0: 2416533, 1: 2417389, 2: 2417389, 6: 2417623, 12: 2417651, 26354: 2453313, 26355: 2453440, 26359: 2462437, 26361: 2462493, 26371: 2462663}
[2025-04-14 10:14:12] 2025-04-14 14:13:52,291 | INFO     | --------------------------------------------------
[2025-04-14 10:14:12] 2025-04-14 14:13:52,291 | INFO     | 
[2025-04-14 10:14:12] 2025-04-14 14:13:52,291 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-14 10:14:12] 2025-04-14 14:13:52,357 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-14 10:14:12] 2025-04-14 14:13:52,358 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-14 10:14:12] 2025-04-14 14:13:52,358 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-14 10:14:12] 2025-04-14 14:13:52,358 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-14 10:14:12] 2025-04-14 14:13:52,358 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-14 10:14:12] 2025-04-14 14:13:52,358 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-14 10:14:12] 2025-04-14 14:13:52,358 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-14 10:14:12] 2025-04-14 14:13:52,359 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-14 10:14:12] 2025-04-14 14:13:52,359 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-14 10:14:12] 2025-04-14 14:13:52,359 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-14 10:14:12] 2025-04-14 14:13:52,359 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-14 10:14:12] 2025-04-14 14:13:52,359 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-14 10:14:12] 2025-04-14 14:13:52,359 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-14 10:14:12] 2025-04-14 14:13:52,359 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-14 10:14:12] 2025-04-14 14:13:52,360 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-14 10:14:12] 2025-04-14 14:13:52,360 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-14 10:14:12] 2025-04-14 14:13:52,360 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-14 10:14:12] 2025-04-14 14:13:52,360 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-14 10:14:12] 2025-04-14 14:13:52,360 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-14 10:14:12] 2025-04-14 14:13:52,360 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-14 10:14:12] 2025-04-14 14:13:52,361 | INFO     | job 6602113362 has completed (purged errors)
[2025-04-14 10:14:12] 2025-04-14 14:13:52,361 | INFO     | overall cleanup function is called
[2025-04-14 10:14:12] 2025-04-14 14:13:53,371 | INFO     | --- collectZombieJob: --- 10, [9822]
[2025-04-14 10:14:12] 2025-04-14 14:13:53,371 | INFO     | zombie collector waiting for pid 9822
[2025-04-14 10:14:12] 2025-04-14 14:13:53,371 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-14 10:14:12] 2025-04-14 14:13:53,371 | INFO     | collected zombie processes
[2025-04-14 10:14:12] 2025-04-14 14:13:53,371 | INFO     | will attempt to kill all subprocesses of pid=9822
[2025-04-14 10:14:12] 2025-04-14 14:13:53,677 | INFO     | process IDs to be killed: [9822] (in reverse order)
[2025-04-14 10:14:12] 2025-04-14 14:13:53,756 | WARNING  | found no corresponding commands to process id(s)
[2025-04-14 10:14:12] 2025-04-14 14:13:53,757 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-14 10:14:12] 2025-04-14 14:13:53,763 | INFO     | did not find any defunct processes belonging to 9822
[2025-04-14 10:14:12] 2025-04-14 14:13:53,769 | INFO     | did not find any defunct processes belonging to 9822
[2025-04-14 10:14:12] 2025-04-14 14:13:53,769 | INFO     | ready for new job
[2025-04-14 10:14:12] 2025-04-14 14:13:53,770 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-14 10:14:12] 2025-04-14 14:13:53,772 | INFO     | **************************************
[2025-04-14 10:14:12] 2025-04-14 14:13:53,772 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-14 10:14:12] 2025-04-14 14:13:53,772 | INFO     | **************************************
[2025-04-14 10:14:12] 2025-04-14 14:13:53,772 | INFO     | 
[2025-04-14 10:14:12] 2025-04-14 14:13:53,774 | INFO     | architecture information:
[2025-04-14 10:14:12] 2025-04-14 14:13:53,774 | INFO     | executing command: cat /etc/os-release
[2025-04-14 10:14:12] 2025-04-14 14:13:53,918 | INFO     | cat /etc/os-release:
[2025-04-14 10:14:12] NAME="CentOS Linux"
[2025-04-14 10:14:12] VERSION="7 (Core)"
[2025-04-14 10:14:12] ID="centos"
[2025-04-14 10:14:12] ID_LIKE="rhel fedora"
[2025-04-14 10:14:12] VERSION_ID="7"
[2025-04-14 10:14:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-14 10:14:12] ANSI_COLOR="0;31"
[2025-04-14 10:14:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-14 10:14:12] HOME_URL="https://www.centos.org/"
[2025-04-14 10:14:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-14 10:14:12] 
[2025-04-14 10:14:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-14 10:14:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-14 10:14:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-14 10:14:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-14 10:14:12] 
[2025-04-14 10:14:12] 2025-04-14 14:13:53,937 | INFO     | **************************************
[2025-04-14 10:14:12] 2025-04-14 14:13:54,346 | INFO     | PID=3234 has CPU usage=13.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-14 10:14:12] 2025-04-14 14:13:54,346 | INFO     | .. there are 4 such processes running
[2025-04-14 10:14:12] 2025-04-14 14:13:54,440 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-14 10:14:12] 2025-04-14 14:13:54,559 | INFO     | sufficient remaining disk space (29373759488 B)
[2025-04-14 10:14:12] 2025-04-14 14:13:54,560 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-14 10:14:12] 2025-04-14 14:13:54,560 | INFO     | current server update state: UPDATING_FINAL
[2025-04-14 10:14:12] 2025-04-14 14:13:54,560 | INFO     | update_server=False
[2025-04-14 10:14:12] 2025-04-14 14:13:54,560 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-14 10:14:12] 2025-04-14 14:13:54,561 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-14 10:14:12] 2025-04-14 14:13:54,561 | INFO     | found 0 job(s) in 20 queues
[2025-04-14 10:14:12] 2025-04-14 14:13:54,561 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-14 10:14:12] 2025-04-14 14:13:54,561 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-14 10:14:12] 2025-04-14 14:13:54,770 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-14 10:14:12] 2025-04-14 14:13:54,770 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-14 10:14:12] 2025-04-14 14:13:54,771 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-14 10:14:12] 2025-04-14 14:13:54,771 | INFO     | will abort loop
[2025-04-14 10:14:12] 2025-04-14 14:13:54,789 | INFO     | all data control threads have been joined
[2025-04-14 10:14:12] 2025-04-14 14:13:55,530 | INFO     | all payload control threads have been joined
[2025-04-14 10:14:12] 2025-04-14 14:13:55,566 | INFO     | [job] retrieve thread has finished
[2025-04-14 10:14:12] 2025-04-14 14:13:55,777 | INFO     | [job] job monitor thread has finished
[2025-04-14 10:14:12] 2025-04-14 14:13:55,795 | INFO     | [data] control thread has finished
[2025-04-14 10:14:12] 2025-04-14 14:13:55,868 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-14 10:14:12] 2025-04-14 14:13:56,095 | INFO     | all job control threads have been joined
[2025-04-14 10:14:12] 2025-04-14 14:13:56,324 | INFO     | [data] copytool_in thread has finished
[2025-04-14 10:14:12] 2025-04-14 14:13:56,340 | INFO     | [payload] execute_payloads thread has finished
[2025-04-14 10:14:12] 2025-04-14 14:13:56,376 | INFO     | [payload] validate_post thread has finished
[2025-04-14 10:14:12] 2025-04-14 14:13:56,537 | INFO     | [payload] control thread has finished
[2025-04-14 10:14:12] 2025-04-14 14:13:56,667 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-14 10:14:12] 2025-04-14 14:13:56,860 | INFO     | [job] create_data_payload thread has finished
[2025-04-14 10:14:12] 2025-04-14 14:13:56,869 | INFO     | [payload] validate_pre thread has finished
[2025-04-14 10:14:12] 2025-04-14 14:13:56,884 | INFO     | [job] validate thread has finished
[2025-04-14 10:14:12] 2025-04-14 14:13:56,995 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-14 10:14:12] 2025-04-14 14:13:57,025 | INFO     | [payload] failed_post thread has finished
[2025-04-14 10:14:12] 2025-04-14 14:13:57,100 | INFO     | [job] control thread has finished
[2025-04-14 10:14:12] 2025-04-14 14:13:57,236 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-14 10:14:12] 2025-04-14 14:13:57,873 | INFO     | [data] copytool_out thread has finished
[2025-04-14 10:14:12] 2025-04-14 14:13:58,244 | INFO     | [job] queue monitor thread has finished
[2025-04-14 10:14:12] 2025-04-14 14:14:01,004 | INFO     | [data] queue_monitor thread has finished
[2025-04-14 10:14:12] 2025-04-14 14:14:02,240 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140550227941184)>', '<ExcThread(monitor, started 140550001043200)>']
[2025-04-14 10:14:12] 2025-04-14 14:14:02,626 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-14 10:14:12] 2025-04-14 14:14:02,626 | INFO     | [monitor] control thread has ended
[2025-04-14 10:14:12] 2025-04-14 14:14:07,253 | INFO     | all workflow threads have been joined
[2025-04-14 10:14:12] 2025-04-14 14:14:07,254 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-14 10:14:12] 2025-04-14 14:14:07,278 | INFO     | traces error code: 0
[2025-04-14 10:14:12] 2025-04-14 14:14:07,279 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-14 10:14:12] 2025-04-14 14:14:08,981 [wrapper] ==== pilot stdout END ====
[2025-04-14 10:14:12] 2025-04-14 14:14:08,994 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-14 10:14:12] 2025-04-14 14:14:08,998 [wrapper] pilotpid: 3234
[2025-04-14 10:14:12] 2025-04-14 14:14:09,003 [wrapper] Pilot exit status: 0
[2025-04-14 10:14:12] 2025-04-14 14:14:09,137 [wrapper] pandaids: 6602113362
[2025-04-14 10:14:12] 2025-04-14 14:14:09,258 [wrapper] cleanup supervisor_pilot  7354 3235
[2025-04-14 10:14:12] 2025-04-14 14:14:09,265 [wrapper] Test setup, not cleaning
[2025-04-14 10:14:12] 2025-04-14 14:14:09,268 [wrapper] apfmon messages muted
[2025-04-14 10:14:12] 2025-04-14 14:14:09,272 [wrapper] ==== wrapper stdout END ====
[2025-04-14 10:14:12] 2025-04-14 14:14:09,275 [wrapper] ==== wrapper stderr END ====
[2025-04-14 10:14:12]  *** Error codes and diagnostics ***
[2025-04-14 10:14:12]     "exeErrorCode": 0,
[2025-04-14 10:14:12]     "exeErrorDiag": "",
[2025-04-14 10:14:12]     "pilotErrorCode": 0,
[2025-04-14 10:14:12]     "pilotErrorDiag": "",
[2025-04-14 10:14:12]  *** Listing of results directory ***
[2025-04-14 10:14:12] total 419192
[2025-04-14 10:14:12] -rw-r--r-- 1 boincer umatlas    495897 Apr 13 22:47 pilot3.tar.gz
[2025-04-14 10:14:12] -rw-r--r-- 1 boincer umatlas      5111 Apr 13 22:58 queuedata.json
[2025-04-14 10:14:12] -rwx------ 1 boincer umatlas     37140 Apr 13 22:59 runpilot2-wrapper.sh
[2025-04-14 10:14:12] -rw-r--r-- 1 boincer umatlas       100 Apr 14 02:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-14 10:14:12] -rwxr-xr-x 1 boincer umatlas      7986 Apr 14 02:53 run_atlas
[2025-04-14 10:14:12] -rw-r--r-- 1 boincer umatlas       105 Apr 14 02:53 job.xml
[2025-04-14 10:14:12] -rw-r--r-- 2 boincer umatlas 223454343 Apr 14 02:53 EVNT.44075481._000475.pool.root.1
[2025-04-14 10:14:12] -rw-r--r-- 2 boincer umatlas     17569 Apr 14 02:53 start_atlas.sh
[2025-04-14 10:14:12] drwxrwx--x 2 boincer umatlas      4096 Apr 14 02:53 shared
[2025-04-14 10:14:12] -rw-r--r-- 2 boincer umatlas    508895 Apr 14 02:53 input.tar.gz
[2025-04-14 10:14:12] -rw-r--r-- 1 boincer umatlas         0 Apr 14 02:53 boinc_lockfile
[2025-04-14 10:14:12] -rw-r--r-- 1 boincer umatlas      2576 Apr 14 02:53 pandaJob.out
[2025-04-14 10:14:12] -rw------- 1 boincer umatlas       424 Apr 14 02:53 setup.sh.local
[2025-04-14 10:14:12] -rw------- 1 boincer umatlas    981870 Apr 14 02:54 agis_schedconf.cvmfs.json
[2025-04-14 10:14:12] drwx------ 4 boincer umatlas      4096 Apr 14 02:54 pilot3
[2025-04-14 10:14:12] -rw------- 1 boincer umatlas 196431832 Apr 14 10:08 HITS.44075483._012065.pool.root.1
[2025-04-14 10:14:12] -rw-r--r-- 1 boincer umatlas      5865 Apr 14 10:10 init_data.xml
[2025-04-14 10:14:12] -rw-r--r-- 1 boincer umatlas       531 Apr 14 10:11 boinc_task_state.xml
[2025-04-14 10:14:12] -rw------- 1 boincer umatlas      1070 Apr 14 10:13 memory_monitor_summary.json
[2025-04-14 10:14:12] -rw------- 1 boincer umatlas        95 Apr 14 10:13 pilot_heartbeat.json
[2025-04-14 10:14:12] -rw------- 1 boincer umatlas   1603529 Apr 14 10:13 agis_ddmendpoints.agis.ALL.json
[2025-04-14 10:14:12] -rw------- 1 boincer umatlas    563050 Apr 14 10:13 log.44075483._012065.job.log.tgz.1
[2025-04-14 10:14:12] -rw------- 1 boincer umatlas      7783 Apr 14 10:13 heartbeat.json
[2025-04-14 10:14:12] -rw-r--r-- 1 boincer umatlas      8192 Apr 14 10:13 boinc_mmap_file
[2025-04-14 10:14:12] -rw-r--r-- 1 boincer umatlas        28 Apr 14 10:13 wrapper_checkpoint.txt
[2025-04-14 10:14:12] -rw------- 1 boincer umatlas      5054 Apr 14 10:14 pilotlog.txt
[2025-04-14 10:14:12] -rw------- 1 boincer umatlas   2203557 Apr 14 10:14 log.44075483._012065.job.log.1
[2025-04-14 10:14:12] -rw------- 1 boincer umatlas       357 Apr 14 10:14 output.list
[2025-04-14 10:14:12] -rw-r--r-- 1 boincer umatlas       620 Apr 14 10:14 runtime_log
[2025-04-14 10:14:12] -rw------- 1 boincer umatlas   2785280 Apr 14 10:14 result.tar.gz
[2025-04-14 10:14:12] -rw------- 1 boincer umatlas       662 Apr 14 10:14 qTNMDm4DPO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmFNVLDmD90vun.diag
[2025-04-14 10:14:12] -rw-r--r-- 1 boincer umatlas     11125 Apr 14 10:14 runtime_log.err
[2025-04-14 10:14:12] -rw-r--r-- 1 boincer umatlas     21038 Apr 14 10:14 stderr.txt
[2025-04-14 10:14:12] HITS file was successfully produced:
[2025-04-14 10:14:12] -rw------- 1 boincer umatlas 196431832 Apr 14 10:08 shared/HITS.pool.root.1
[2025-04-14 10:14:12]  *** Contents of shared directory: ***
[2025-04-14 10:14:12] total 413292
[2025-04-14 10:14:12] -rw-r--r-- 2 boincer umatlas 223454343 Apr 14 02:53 ATLAS.root_0
[2025-04-14 10:14:12] -rw-r--r-- 2 boincer umatlas     17569 Apr 14 02:53 start_atlas.sh
[2025-04-14 10:14:12] -rw-r--r-- 2 boincer umatlas    508895 Apr 14 02:53 input.tar.gz
[2025-04-14 10:14:12] -rw------- 1 boincer umatlas 196431832 Apr 14 10:08 HITS.pool.root.1
[2025-04-14 10:14:12] -rw------- 1 boincer umatlas   2785280 Apr 14 10:14 result.tar.gz
10:14:14 (30737): run_atlas exited; CPU time 94172.610937
10:14:14 (30737): called boinc_finish(0)

</stderr_txt>
]]>

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