Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:39:44 (19171): wrapper (7.7.26015): starting
02:39:44 (19171): wrapper: running run_atlas (--nthreads 8)
[2025-04-14 02:39:44] Arguments: --nthreads 8
[2025-04-14 02:39:44] Threads: 8
[2025-04-14 02:39:44] Checking for CVMFS
[2025-04-14 02:39:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-14 02:39:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-14 02:39:44] Running cvmfs_config stat atlas.cern.ch
[2025-04-14 02:39:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-14 02:39:45] 2.11.2.0 11350 3618 158804 144839 0 451 15139364 18432001 20918 130560 0 32727903 98.604 87970067 54326 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-14 02:39:45] CVMFS is ok
[2025-04-14 02:39:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-14 02:39:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-14 02:39:45] Further information can be found at the LHC@home message board.
[2025-04-14 02:39:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-14 02:39:45] Checking for apptainer binary...
[2025-04-14 02:39:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-14 02:39:45] Running /usr/bin/apptainer --version
[2025-04-14 02:39:45] apptainer version 1.3.2-1.el7
[2025-04-14 02:39:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-14 02:39:50] c-212-18.aglt2.org
[2025-04-14 02:39:50] apptainer works
[2025-04-14 02:39:50] Set ATHENA_PROC_NUMBER=8
[2025-04-14 02:39:50] Set ATHENA_CORE_NUMBER=8
[2025-04-14 02:39:50] Starting ATLAS job with PandaID=6602103367
[2025-04-14 02:39:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-14 05:06:38]  *** The last 200 lines of the pilot log: ***
[2025-04-14 05:06:38] 2025-04-14 09:06:22,786 | INFO     | -- intersect: -123662425517.34293
[2025-04-14 05:06:38] 2025-04-14 09:06:22,786 | INFO     | intersect: -123662425517.34293
[2025-04-14 05:06:38] 2025-04-14 09:06:22,786 | INFO     | chi2: 2.7095431524675773
[2025-04-14 05:06:38] 2025-04-14 09:06:22,787 | INFO     | current chi2=2.7095431524675773 (change=54.27297422484326 %)
[2025-04-14 05:06:38] 2025-04-14 09:06:22,787 | INFO     | sum of square deviations: 697054930.0
[2025-04-14 05:06:38] 2025-04-14 09:06:22,787 | INFO     | sum of deviations: 27415003873.0
[2025-04-14 05:06:38] 2025-04-14 09:06:22,787 | INFO     | mean x: 1744617568.0
[2025-04-14 05:06:38] 2025-04-14 09:06:22,787 | INFO     | mean y: 2434967.9847328244
[2025-04-14 05:06:38] 2025-04-14 09:06:22,788 | INFO     | -- intersect: -68612957198.63238
[2025-04-14 05:06:38] 2025-04-14 09:06:22,788 | INFO     | intersect: -68612957198.63238
[2025-04-14 05:06:38] 2025-04-14 09:06:22,788 | INFO     | chi2: 1.136355034017799
[2025-04-14 05:06:38] 2025-04-14 09:06:22,788 | INFO     | current chi2=1.136355034017799 (change=58.061009916637715 %)
[2025-04-14 05:06:38] 2025-04-14 09:06:22,788 | INFO     | sum of square deviations: 620244187.5
[2025-04-14 05:06:38] 2025-04-14 09:06:22,789 | INFO     | sum of deviations: 6042363662.0
[2025-04-14 05:06:38] 2025-04-14 09:06:22,789 | INFO     | mean x: 1744617720.5
[2025-04-14 05:06:38] 2025-04-14 09:06:22,789 | INFO     | mean y: 2477138.746031746
[2025-04-14 05:06:38] 2025-04-14 09:06:22,792 | INFO     | -- intersect: -16993433392.750036
[2025-04-14 05:06:38] 2025-04-14 09:06:22,792 | INFO     | intersect: -16993433392.750036
[2025-04-14 05:06:38] 2025-04-14 09:06:22,792 | INFO     | chi2: 0.08202033906783009
[2025-04-14 05:06:38] 2025-04-14 09:06:22,793 | INFO     | current chi2=0.08202033906783009 (change=92.78215552248389 %)
[2025-04-14 05:06:38] 2025-04-14 09:06:22,793 | INFO     | sum of square deviations: 549294020.0
[2025-04-14 05:06:38] 2025-04-14 09:06:22,793 | INFO     | sum of deviations: 179383432.00000006
[2025-04-14 05:06:38] 2025-04-14 09:06:22,793 | INFO     | mean x: 1744617873.0
[2025-04-14 05:06:38] 2025-04-14 09:06:22,793 | INFO     | mean y: 2489656.661157025
[2025-04-14 05:06:38] 2025-04-14 09:06:22,793 | INFO     | -- intersect: -567251739.0075601
[2025-04-14 05:06:38] 2025-04-14 09:06:22,793 | INFO     | intersect: -567251739.0075601
[2025-04-14 05:06:38] 2025-04-14 09:06:22,794 | INFO     | chi2: 0.0019180494378553418
[2025-04-14 05:06:38] 2025-04-14 09:06:22,794 | INFO     | current chi2=0.0019180494378553418 (change=97.66149535632968 %)
[2025-04-14 05:06:38] 2025-04-14 09:06:22,794 | INFO     | sum of square deviations: 483971865.0
[2025-04-14 05:06:38] 2025-04-14 09:06:22,794 | INFO     | sum of deviations: 25686703.50000002
[2025-04-14 05:06:38] 2025-04-14 09:06:22,794 | INFO     | mean x: 1744618025.5
[2025-04-14 05:06:38] 2025-04-14 09:06:22,794 | INFO     | mean y: 2490001.543103448
[2025-04-14 05:06:38] 2025-04-14 09:06:22,794 | INFO     | -- intersect: -90105228.02003238
[2025-04-14 05:06:38] 2025-04-14 09:06:22,794 | INFO     | intersect: -90105228.02003238
[2025-04-14 05:06:38] 2025-04-14 09:06:22,795 | INFO     | chi2: 0.001702206966457474
[2025-04-14 05:06:38] 2025-04-14 09:06:22,795 | INFO     | current chi2=0.001702206966457474 (change=11.253227739489917 %)
[2025-04-14 05:06:38] 2025-04-14 09:06:22,795 | INFO     | left removable region: 50
[2025-04-14 05:06:38] 2025-04-14 09:06:22,795 | INFO     | sum of square deviations: 190403570.0
[2025-04-14 05:06:38] 2025-04-14 09:06:22,795 | INFO     | sum of deviations: 239881523.99999985
[2025-04-14 05:06:38] 2025-04-14 09:06:22,798 | INFO     | mean x: 1744618605.0
[2025-04-14 05:06:38] 2025-04-14 09:06:22,798 | INFO     | mean y: 2489079.188235294
[2025-04-14 05:06:38] 2025-04-14 09:06:22,798 | INFO     | -- intersect: -2195483205.5024023
[2025-04-14 05:06:38] 2025-04-14 09:06:22,799 | INFO     | intersect: -2195483205.5024023
[2025-04-14 05:06:38] 2025-04-14 09:06:22,799 | INFO     | chi2: 5.037796102409194e-05
[2025-04-14 05:06:38] 2025-04-14 09:06:22,799 | INFO     | -- intersect: -2195483205.5024023
[2025-04-14 05:06:38] 2025-04-14 09:06:22,799 | INFO     | current memory leak: 1.26 B/s (using 85 data points, chi2=0.00)
[2025-04-14 05:06:38] 2025-04-14 09:06:22,800 | INFO     | ..............................
[2025-04-14 05:06:38] 2025-04-14 09:06:22,800 | INFO     | . Timing measurements:
[2025-04-14 05:06:38] 2025-04-14 09:06:22,800 | INFO     | . get job = 0 s
[2025-04-14 05:06:38] 2025-04-14 09:06:22,800 | INFO     | . initial setup = 4 s
[2025-04-14 05:06:38] 2025-04-14 09:06:22,800 | INFO     | . payload setup = 35 s
[2025-04-14 05:06:38] 2025-04-14 09:06:22,800 | INFO     | . stage-in = 0 s
[2025-04-14 05:06:38] 2025-04-14 09:06:22,800 | INFO     | . payload execution = 8614 s
[2025-04-14 05:06:38] 2025-04-14 09:06:22,800 | INFO     | . stage-out = 1 s
[2025-04-14 05:06:38] 2025-04-14 09:06:22,801 | INFO     | . log creation = 0 s
[2025-04-14 05:06:38] 2025-04-14 09:06:22,801 | INFO     | ..............................
[2025-04-14 05:06:38] 2025-04-14 09:06:22,869 | INFO     | sufficient remaining disk space (102973308928 B)
[2025-04-14 05:06:38] 2025-04-14 09:06:22,870 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-04-14 05:06:38] 2025-04-14 09:06:22,870 | INFO     | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6602103367: 3868526 B (within 2537553920 B limit)
[2025-04-14 05:06:38] 2025-04-14 09:06:22,870 | INFO     | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6602103367/HITS.44075483._009381.pool.root.1 does not exist (skip from workdir size calculation)
[2025-04-14 05:06:38] 2025-04-14 09:06:22,870 | INFO     | total size of present files: 0 B (workdir size: 3868526 B)
[2025-04-14 05:06:38] 2025-04-14 09:06:22,871 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6602103367/HITS.44075483._009381.pool.root.1 since it does not exist
[2025-04-14 05:06:38] 2025-04-14 09:06:23,119 | INFO     | 
[2025-04-14 05:06:38] 2025-04-14 09:06:23,120 | INFO     | job summary report
[2025-04-14 05:06:38] 2025-04-14 09:06:23,120 | INFO     | --------------------------------------------------
[2025-04-14 05:06:38] 2025-04-14 09:06:23,120 | INFO     | PanDA job id: 6602103367
[2025-04-14 05:06:38] 2025-04-14 09:06:23,120 | INFO     | task id: 44075483
[2025-04-14 05:06:38] 2025-04-14 09:06:23,120 | INFO     | errors: (none)
[2025-04-14 05:06:38] 2025-04-14 09:06:23,120 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-14 05:06:38] 2025-04-14 09:06:23,120 | INFO     | pilot state: finished 
[2025-04-14 05:06:38] 2025-04-14 09:06:23,120 | INFO     | transexitcode: 0
[2025-04-14 05:06:38] 2025-04-14 09:06:23,120 | INFO     | exeerrorcode: 0
[2025-04-14 05:06:38] 2025-04-14 09:06:23,120 | INFO     | exeerrordiag: 
[2025-04-14 05:06:38] 2025-04-14 09:06:23,120 | INFO     | exitcode: 0
[2025-04-14 05:06:38] 2025-04-14 09:06:23,120 | INFO     | exitmsg: OK
[2025-04-14 05:06:38] 2025-04-14 09:06:23,121 | INFO     | cpuconsumptiontime: 34940 s
[2025-04-14 05:06:38] 2025-04-14 09:06:23,121 | INFO     | nevents: 400
[2025-04-14 05:06:38] 2025-04-14 09:06:23,121 | INFO     | neventsw: 0
[2025-04-14 05:06:38] 2025-04-14 09:06:23,121 | INFO     | pid: 10055
[2025-04-14 05:06:38] 2025-04-14 09:06:23,121 | INFO     | pgrp: 10055
[2025-04-14 05:06:38] 2025-04-14 09:06:23,121 | INFO     | corecount: 8
[2025-04-14 05:06:38] 2025-04-14 09:06:23,121 | INFO     | event service: False
[2025-04-14 05:06:38] 2025-04-14 09:06:23,121 | INFO     | sizes: {0: 2417359, 11: 2417359, 22: 2417387, 24: 2417621, 32: 2417649, 8653: 2445857, 8655: 2454854, 8669: 2454996}
[2025-04-14 05:06:38] 2025-04-14 09:06:23,121 | INFO     | --------------------------------------------------
[2025-04-14 05:06:38] 2025-04-14 09:06:23,121 | INFO     | 
[2025-04-14 05:06:38] 2025-04-14 09:06:23,121 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-14 05:06:38] 2025-04-14 09:06:23,236 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-14 05:06:38] 2025-04-14 09:06:23,236 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-14 05:06:38] 2025-04-14 09:06:23,236 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-14 05:06:38] 2025-04-14 09:06:23,236 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-14 05:06:38] 2025-04-14 09:06:23,237 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-14 05:06:38] 2025-04-14 09:06:23,237 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-14 05:06:38] 2025-04-14 09:06:23,237 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-14 05:06:38] 2025-04-14 09:06:23,237 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-14 05:06:38] 2025-04-14 09:06:23,237 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-14 05:06:38] 2025-04-14 09:06:23,237 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-14 05:06:38] 2025-04-14 09:06:23,237 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-14 05:06:38] 2025-04-14 09:06:23,237 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-14 05:06:38] 2025-04-14 09:06:23,237 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-14 05:06:38] 2025-04-14 09:06:23,237 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-14 05:06:38] 2025-04-14 09:06:23,237 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-14 05:06:38] 2025-04-14 09:06:23,237 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-14 05:06:38] 2025-04-14 09:06:23,237 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-14 05:06:38] 2025-04-14 09:06:23,237 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-14 05:06:38] 2025-04-14 09:06:23,237 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-14 05:06:38] 2025-04-14 09:06:23,237 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-14 05:06:38] 2025-04-14 09:06:23,238 | INFO     | job 6602103367 has completed (purged errors)
[2025-04-14 05:06:38] 2025-04-14 09:06:23,238 | INFO     | overall cleanup function is called
[2025-04-14 05:06:38] 2025-04-14 09:06:23,337 | INFO     | number of running child processes to parent process 10055: 1
[2025-04-14 05:06:38] 2025-04-14 09:06:23,337 | INFO     | maximum number of monitored processes: 6
[2025-04-14 05:06:38] 2025-04-14 09:06:23,337 | INFO     | aborting job monitoring since job object (job id=6602103367) has expired
[2025-04-14 05:06:38] 2025-04-14 09:06:24,250 | INFO     | --- collectZombieJob: --- 10, [10055]
[2025-04-14 05:06:38] 2025-04-14 09:06:24,250 | INFO     | zombie collector waiting for pid 10055
[2025-04-14 05:06:38] 2025-04-14 09:06:24,250 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-14 05:06:38] 2025-04-14 09:06:24,250 | INFO     | collected zombie processes
[2025-04-14 05:06:38] 2025-04-14 09:06:24,250 | INFO     | will attempt to kill all subprocesses of pid=10055
[2025-04-14 05:06:38] 2025-04-14 09:06:24,848 | INFO     | process IDs to be killed: [10055] (in reverse order)
[2025-04-14 05:06:38] 2025-04-14 09:06:25,045 | WARNING  | found no corresponding commands to process id(s)
[2025-04-14 05:06:38] 2025-04-14 09:06:25,046 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-14 05:06:38] 2025-04-14 09:06:25,075 | INFO     | did not find any defunct processes belonging to 10055
[2025-04-14 05:06:38] 2025-04-14 09:06:25,114 | INFO     | did not find any defunct processes belonging to 10055
[2025-04-14 05:06:38] 2025-04-14 09:06:25,115 | INFO     | ready for new job
[2025-04-14 05:06:38] 2025-04-14 09:06:25,115 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-14 05:06:38] 2025-04-14 09:06:25,117 | INFO     | **************************************
[2025-04-14 05:06:38] 2025-04-14 09:06:25,117 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-14 05:06:38] 2025-04-14 09:06:25,117 | INFO     | **************************************
[2025-04-14 05:06:38] 2025-04-14 09:06:25,118 | INFO     | 
[2025-04-14 05:06:38] 2025-04-14 09:06:25,122 | INFO     | architecture information:
[2025-04-14 05:06:38] 2025-04-14 09:06:25,122 | INFO     | executing command: cat /etc/os-release
[2025-04-14 05:06:38] 2025-04-14 09:06:25,158 | INFO     | cat /etc/os-release:
[2025-04-14 05:06:38] NAME="CentOS Linux"
[2025-04-14 05:06:38] VERSION="7 (Core)"
[2025-04-14 05:06:38] ID="centos"
[2025-04-14 05:06:38] ID_LIKE="rhel fedora"
[2025-04-14 05:06:38] VERSION_ID="7"
[2025-04-14 05:06:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-14 05:06:38] ANSI_COLOR="0;31"
[2025-04-14 05:06:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-14 05:06:38] HOME_URL="https://www.centos.org/"
[2025-04-14 05:06:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-14 05:06:38] 
[2025-04-14 05:06:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-14 05:06:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-14 05:06:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-14 05:06:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-14 05:06:38] 
[2025-04-14 05:06:38] 2025-04-14 09:06:25,159 | INFO     | **************************************
[2025-04-14 05:06:38] 2025-04-14 09:06:25,661 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-14 05:06:38] 2025-04-14 09:06:25,686 | INFO     | sufficient remaining disk space (102977503232 B)
[2025-04-14 05:06:38] 2025-04-14 09:06:25,686 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-14 05:06:38] 2025-04-14 09:06:25,686 | INFO     | current server update state: UPDATING_FINAL
[2025-04-14 05:06:38] 2025-04-14 09:06:25,686 | INFO     | update_server=False
[2025-04-14 05:06:38] 2025-04-14 09:06:25,686 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-14 05:06:38] 2025-04-14 09:06:25,689 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-14 05:06:38] 2025-04-14 09:06:25,690 | INFO     | found 0 job(s) in 20 queues
[2025-04-14 05:06:38] 2025-04-14 09:06:25,690 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-14 05:06:38] 2025-04-14 09:06:25,690 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-14 05:06:38] 2025-04-14 09:06:25,790 | INFO     | all payload control threads have been joined
[2025-04-14 05:06:38] 2025-04-14 09:06:25,849 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-14 05:06:38] 2025-04-14 09:06:25,849 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-14 05:06:38] 2025-04-14 09:06:25,850 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-14 05:06:38] 2025-04-14 09:06:25,850 | INFO     | will abort loop
[2025-04-14 05:06:38] 2025-04-14 09:06:26,012 | INFO     | all job control threads have been joined
[2025-04-14 05:06:38] 2025-04-14 09:06:26,414 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-14 05:06:38] 2025-04-14 09:06:26,553 | INFO     | all data control threads have been joined
[2025-04-14 05:06:38] 2025-04-14 09:06:26,691 | INFO     | [job] retrieve thread has finished
[2025-04-14 05:06:38] 2025-04-14 09:06:26,796 | INFO     | [payload] control thread has finished
[2025-04-14 05:06:38] 2025-04-14 09:06:26,859 | INFO     | [job] job monitor thread has finished
[2025-04-14 05:06:38] 2025-04-14 09:06:27,017 | INFO     | [job] control thread has finished
[2025-04-14 05:06:38] 2025-04-14 09:06:27,088 | INFO     | [payload] failed_post thread has finished
[2025-04-14 05:06:38] 2025-04-14 09:06:27,305 | INFO     | [payload] validate_pre thread has finished
[2025-04-14 05:06:38] 2025-04-14 09:06:27,462 | INFO     | [payload] validate_post thread has finished
[2025-04-14 05:06:38] 2025-04-14 09:06:27,465 | INFO     | [job] validate thread has finished
[2025-04-14 05:06:38] 2025-04-14 09:06:27,559 | INFO     | [data] control thread has finished
[2025-04-14 05:06:38] 2025-04-14 09:06:27,690 | INFO     | [payload] execute_payloads thread has finished
[2025-04-14 05:06:38] 2025-04-14 09:06:27,697 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-14 05:06:38] 2025-04-14 09:06:27,845 | INFO     | [job] create_data_payload thread has finished
[2025-04-14 05:06:38] 2025-04-14 09:06:27,896 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-14 05:06:38] 2025-04-14 09:06:27,984 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-14 05:06:38] 2025-04-14 09:06:28,169 | INFO     | [data] copytool_in thread has finished
[2025-04-14 05:06:38] 2025-04-14 09:06:28,420 | INFO     | [data] copytool_out thread has finished
[2025-04-14 05:06:38] 2025-04-14 09:06:28,902 | INFO     | [job] queue monitor thread has finished
[2025-04-14 05:06:38] 2025-04-14 09:06:31,990 | INFO     | [data] queue_monitor thread has finished
[2025-04-14 05:06:38] 2025-04-14 09:06:32,484 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139633772660544)>', '<ExcThread(monitor, started 139633195210496)>']
[2025-04-14 05:06:38] 2025-04-14 09:06:32,726 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-14 05:06:38] 2025-04-14 09:06:32,726 | INFO     | [monitor] control thread has ended
[2025-04-14 05:06:38] 2025-04-14 09:06:37,510 | INFO     | all workflow threads have been joined
[2025-04-14 05:06:38] 2025-04-14 09:06:37,510 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-14 05:06:38] 2025-04-14 09:06:37,511 | INFO     | traces error code: 0
[2025-04-14 05:06:38] 2025-04-14 09:06:37,511 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-14 05:06:38] 2025-04-14 09:06:37,652 [wrapper] ==== pilot stdout END ====
[2025-04-14 05:06:38] 2025-04-14 09:06:37,657 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-14 05:06:38] 2025-04-14 09:06:37,659 [wrapper] pilotpid: 46398
[2025-04-14 05:06:38] 2025-04-14 09:06:37,666 [wrapper] Pilot exit status: 0
[2025-04-14 05:06:38] 2025-04-14 09:06:37,677 [wrapper] pandaids: 6602103367
[2025-04-14 05:06:38] 2025-04-14 09:06:37,788 [wrapper] cleanup supervisor_pilot 33728 46399
[2025-04-14 05:06:38] 2025-04-14 09:06:37,791 [wrapper] Test setup, not cleaning
[2025-04-14 05:06:38] 2025-04-14 09:06:37,802 [wrapper] apfmon messages muted
[2025-04-14 05:06:38] 2025-04-14 09:06:37,806 [wrapper] ==== wrapper stdout END ====
[2025-04-14 05:06:38] 2025-04-14 09:06:37,831 [wrapper] ==== wrapper stderr END ====
[2025-04-14 05:06:38]  *** Error codes and diagnostics ***
[2025-04-14 05:06:38]     "exeErrorCode": 0,
[2025-04-14 05:06:38]     "exeErrorDiag": "",
[2025-04-14 05:06:38]     "pilotErrorCode": 0,
[2025-04-14 05:06:38]     "pilotErrorDiag": "",
[2025-04-14 05:06:38]  *** Listing of results directory ***
[2025-04-14 05:06:38] total 416392
[2025-04-14 05:06:38] -rw-r--r-- 1 boincer umatlas    495897 Apr 13 17:09 pilot3.tar.gz
[2025-04-14 05:06:38] -rw-r--r-- 1 boincer umatlas      5111 Apr 13 17:39 queuedata.json
[2025-04-14 05:06:38] -rwx------ 1 boincer umatlas     37140 Apr 13 17:39 runpilot2-wrapper.sh
[2025-04-14 05:06:38] -rw-r--r-- 1 boincer umatlas       100 Apr 14 02:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-14 05:06:38] -rwxr-xr-x 1 boincer umatlas      7986 Apr 14 02:39 run_atlas
[2025-04-14 05:06:38] -rw-r--r-- 1 boincer umatlas       105 Apr 14 02:39 job.xml
[2025-04-14 05:06:38] -rw-r--r-- 2 boincer umatlas 224443314 Apr 14 02:39 EVNT.44075481._000367.pool.root.1
[2025-04-14 05:06:38] -rw-r--r-- 2 boincer umatlas     17569 Apr 14 02:39 start_atlas.sh
[2025-04-14 05:06:38] drwxrwx--x 2 boincer umatlas      4096 Apr 14 02:39 shared
[2025-04-14 05:06:38] -rw-r--r-- 2 boincer umatlas    508895 Apr 14 02:39 input.tar.gz
[2025-04-14 05:06:38] -rw-r--r-- 1 boincer umatlas         0 Apr 14 02:39 boinc_lockfile
[2025-04-14 05:06:38] -rw-r--r-- 1 boincer umatlas      2575 Apr 14 02:39 pandaJob.out
[2025-04-14 05:06:38] -rw------- 1 boincer umatlas       424 Apr 14 02:39 setup.sh.local
[2025-04-14 05:06:38] -rw------- 1 boincer umatlas    981870 Apr 14 02:40 agis_schedconf.cvmfs.json
[2025-04-14 05:06:38] -rw------- 1 boincer umatlas   1603529 Apr 14 02:40 agis_ddmendpoints.agis.ALL.json
[2025-04-14 05:06:38] drwx------ 4 boincer umatlas      4096 Apr 14 02:40 pilot3
[2025-04-14 05:06:38] -rw-r--r-- 1 boincer umatlas      6301 Apr 14 05:03 init_data.xml
[2025-04-14 05:06:38] -rw------- 1 boincer umatlas        95 Apr 14 05:05 pilot_heartbeat.json
[2025-04-14 05:06:38] -rw------- 1 boincer umatlas 195848462 Apr 14 05:05 HITS.44075483._009381.pool.root.1
[2025-04-14 05:06:38] -rw-r--r-- 1 boincer umatlas       529 Apr 14 05:05 boinc_task_state.xml
[2025-04-14 05:06:38] -rw------- 1 boincer umatlas      1071 Apr 14 05:06 memory_monitor_summary.json
[2025-04-14 05:06:38] -rw------- 1 boincer umatlas    350443 Apr 14 05:06 log.44075483._009381.job.log.tgz.1
[2025-04-14 05:06:38] -rw------- 1 boincer umatlas      7734 Apr 14 05:06 heartbeat.json
[2025-04-14 05:06:38] -rw-r--r-- 1 boincer umatlas      8192 Apr 14 05:06 boinc_mmap_file
[2025-04-14 05:06:38] -rw-r--r-- 1 boincer umatlas        27 Apr 14 05:06 wrapper_checkpoint.txt
[2025-04-14 05:06:38] -rw------- 1 boincer umatlas      4663 Apr 14 05:06 pilotlog.txt
[2025-04-14 05:06:38] -rw------- 1 boincer umatlas    780228 Apr 14 05:06 log.44075483._009381.job.log.1
[2025-04-14 05:06:38] -rw------- 1 boincer umatlas       357 Apr 14 05:06 output.list
[2025-04-14 05:06:38] -rw-r--r-- 1 boincer umatlas       620 Apr 14 05:06 runtime_log
[2025-04-14 05:06:38] -rw------- 1 boincer umatlas   1146880 Apr 14 05:06 result.tar.gz
[2025-04-14 05:06:38] -rw-r--r-- 1 boincer umatlas     11013 Apr 14 05:06 runtime_log.err
[2025-04-14 05:06:38] -rw------- 1 boincer umatlas       659 Apr 14 05:06 ojSNDmdEKO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmtqULDmgMMSGo.diag
[2025-04-14 05:06:38] -rw-r--r-- 1 boincer umatlas     21301 Apr 14 05:06 stderr.txt
[2025-04-14 05:06:38] HITS file was successfully produced:
[2025-04-14 05:06:38] -rw------- 1 boincer umatlas 195848462 Apr 14 05:05 shared/HITS.pool.root.1
[2025-04-14 05:06:38]  *** Contents of shared directory: ***
[2025-04-14 05:06:38] total 412088
[2025-04-14 05:06:38] -rw-r--r-- 2 boincer umatlas 224443314 Apr 14 02:39 ATLAS.root_0
[2025-04-14 05:06:38] -rw-r--r-- 2 boincer umatlas     17569 Apr 14 02:39 start_atlas.sh
[2025-04-14 05:06:38] -rw-r--r-- 2 boincer umatlas    508895 Apr 14 02:39 input.tar.gz
[2025-04-14 05:06:38] -rw------- 1 boincer umatlas 195848462 Apr 14 05:05 HITS.pool.root.1
[2025-04-14 05:06:38] -rw------- 1 boincer umatlas   1146880 Apr 14 05:06 result.tar.gz
05:06:39 (19171): run_atlas exited; CPU time 34643.498214
05:06:39 (19171): called boinc_finish(0)

</stderr_txt>
]]>

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