Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-15 00:06:19 (54695): Detected: vboxwrapper 26206
2025-04-15 00:06:19 (54695): Detected: BOINC client v8.0.2
2025-04-15 00:06:20 (54695): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-15 00:06:20 (54695): Detected: Sandbox Configuration Enabled
2025-04-15 00:06:20 (54695): Successfully copied 'init_data.xml' to the shared directory.
2025-04-15 00:06:21 (54695): Create VM. (boinc_fb22e0c64d950396, slot#0)
2025-04-15 00:06:22 (54695): Setting Memory Size for VM. (4400MB)
2025-04-15 00:06:23 (54695): Setting CPU Count for VM. (4)
2025-04-15 00:06:24 (54695): Setting Chipset Options for VM.
2025-04-15 00:06:24 (54695): Setting Graphics Controller Options for VM.
2025-04-15 00:06:25 (54695): Setting Boot Options for VM.
2025-04-15 00:06:25 (54695): Setting Network Configuration for NAT.
2025-04-15 00:06:26 (54695): Enabling VM Network Access.
2025-04-15 00:06:27 (54695): Disabling USB Support for VM.
2025-04-15 00:06:27 (54695): Disabling COM Port Support for VM.
2025-04-15 00:06:28 (54695): Disabling Audio Support for VM.
2025-04-15 00:06:28 (54695): Disabling Clipboard Support for VM.
2025-04-15 00:06:29 (54695): Disabling Drag and Drop Support for VM.
2025-04-15 00:06:29 (54695): Adding storage controller(s) to VM.
2025-04-15 00:06:30 (54695): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-15 00:06:35 (54695): Adding VirtualBox Guest Additions to VM.
2025-04-15 00:06:35 (54695): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-15 00:06:36 (54695): forwarding host port 50053 to guest port 80
2025-04-15 00:06:36 (54695): Enabling remote desktop for VM.
2025-04-15 00:06:37 (54695): Required extension pack not installed, remote desktop not enabled.
2025-04-15 00:06:37 (54695): Enabling shared directory for VM.
2025-04-15 00:06:38 (54695): Starting VM using VBoxManage interface. (boinc_fb22e0c64d950396, slot#0)
2025-04-15 00:06:44 (54695): Successfully started VM. (PID = '54778')
2025-04-15 00:06:44 (54695): Reporting VM Process ID to BOINC.
2025-04-15 00:06:44 (54695): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-15 00:06:44 (54695): Guest Log: CPUID EDX: 0x178bfbff
2025-04-15 00:06:44 (54695): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-15 00:06:44 (54695): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-15 00:06:44 (54695): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-15 00:06:44 (54695): Detected: Web Application Enabled (http://localhost:50053)
2025-04-15 00:06:44 (54695): Preference change detected
2025-04-15 00:06:44 (54695): Setting CPU throttle for VM. (100%)
2025-04-15 00:06:44 (54695): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-15 00:06:46 (54695): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-15 00:06:46 (54695): Guest Log: BIOS: Booting from Hard Disk...
2025-04-15 00:06:51 (54695): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-15 00:06:51 (54695): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-15 00:06:51 (54695): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-15 00:07:02 (54695): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-15 00:07:02 (54695): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-15 00:07:18 (54695): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-15 00:07:18 (54695): Guest Log: 00:00:00.000236 main     Log opened 2025-04-14T14:07:16.506387000Z
2025-04-15 00:07:18 (54695): Guest Log: 00:00:00.000445 main     OS Product: Linux
2025-04-15 00:07:18 (54695): Guest Log: 00:00:00.000526 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-15 00:07:18 (54695): Guest Log: 00:00:00.000600 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-15 00:07:18 (54695): Guest Log: 00:00:00.000678 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-15 00:07:18 (54695): Guest Log: 00:00:00.000679 main     Process ID: 1310
2025-04-15 00:07:18 (54695): Guest Log: 00:00:00.000680 main     Package type: LINUX_64BITS_GENERIC
2025-04-15 00:07:18 (54695): Guest Log: 00:00:00.003648 main     5.2.32 r132073 started. Verbose level = 0
2025-04-15 00:07:18 (54695): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-15 00:07:18 (54695): Guest Log: [INFO] Mounting shared directory
2025-04-15 00:07:18 (54695): Guest Log: [INFO] Checking for init_data.xml
2025-04-15 00:07:33 (54695): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-15 00:07:33 (54695): Guest Log: [INFO] Detected branch: prod
2025-04-15 00:07:35 (54695): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-15 00:07:35 (54695): Guest Log: Copying input files
2025-04-15 00:07:40 (54695): Guest Log: Copied input files into RunAtlas.
2025-04-15 00:07:40 (54695): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-15 00:07:40 (54695): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-15 00:07:40 (54695): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-15 00:07:40 (54695): Guest Log: Further information can be found at the LHC@home message board.
2025-04-15 00:07:57 (54695): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-15 00:07:58 (54695): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-15 00:07:58 (54695): Guest Log: 2.6.3.0 1589 0 30188 144851 4 1 3117322 4096000 0 65024 0 0 n/a 1 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-15 00:08:00 (54695): Guest Log: copied the webapp to /var/www
2025-04-15 00:08:00 (54695): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-15 00:08:00 (54695): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-15 00:08:00 (54695): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-15 00:08:01 (54695): Guest Log:  *** Starting ATLAS job. (PandaID=6602113176 taskID=44075483) ***
2025-04-15 01:46:56 (54695): Status Report: Elapsed Time: '6000.915600'
2025-04-15 01:46:56 (54695): Status Report: CPU Time: '15630.270000'
2025-04-15 03:27:16 (54695): Status Report: Elapsed Time: '12001.790548'
2025-04-15 03:27:16 (54695): Status Report: CPU Time: '37846.780000'
2025-04-15 05:07:33 (54695): Status Report: Elapsed Time: '18002.788621'
2025-04-15 05:07:33 (54695): Status Report: CPU Time: '60321.010000'
2025-04-15 05:56:23 (54695): VM state change detected. (old = 'running', new = 'paused')
2025-04-15 05:59:24 (54695): VM state change detected. (old = 'paused', new = 'running')
2025-04-15 06:50:51 (54695): Status Report: Elapsed Time: '24003.592898'
2025-04-15 06:50:51 (54695): Status Report: CPU Time: '82008.490000'
2025-04-15 07:31:06 (54695): VM state change detected. (old = 'running', new = 'paused')
2025-04-15 07:34:16 (54695): VM state change detected. (old = 'paused', new = 'running')
2025-04-15 08:17:29 (54695): VM state change detected. (old = 'running', new = 'paused')
2025-04-15 08:20:26 (54695): VM state change detected. (old = 'paused', new = 'running')
2025-04-15 08:37:08 (54695): VM state change detected. (old = 'running', new = 'paused')
2025-04-15 08:40:10 (54695): VM state change detected. (old = 'paused', new = 'running')
2025-04-15 08:40:15 (54695): Status Report: Elapsed Time: '30004.569103'
2025-04-15 08:40:15 (54695): Status Report: CPU Time: '104610.940000'
2025-04-15 08:41:24 (54695): Guest Log:  *** Job finished ***
2025-04-15 08:41:24 (54695): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-15 08:41:24 (54695): Guest Log: 2025-04-14 22:29:10,785 | INFO     | [data] copytool_in thread has finished
2025-04-15 08:41:24 (54695): Guest Log: 2025-04-14 22:29:10,903 | INFO     | [job] validate thread has finished
2025-04-15 08:41:24 (54695): Guest Log: 2025-04-14 22:29:14,010 | INFO     | [data] queue_monitor thread has finished
2025-04-15 08:41:24 (54695): Guest Log: 2025-04-14 22:29:15,507 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140620947674944)>', '<ExcThread(monitor, started 140620349814528)>']
2025-04-15 08:41:24 (54695): Guest Log: 2025-04-14 22:29:16,453 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-15 08:41:24 (54695): Guest Log: 2025-04-14 22:29:16,454 | INFO     | [monitor] control thread has ended
2025-04-15 08:41:24 (54695): Guest Log: 2025-04-14 22:29:20,512 | INFO     | all workflow threads have been joined
2025-04-15 08:41:24 (54695): Guest Log: 2025-04-14 22:29:20,513 | INFO     | end of generic workflow (traces error code: 0)
2025-04-15 08:41:24 (54695): Guest Log: 2025-04-14 22:29:20,513 | INFO     | traces error code: 0
2025-04-15 08:41:24 (54695): Guest Log: 2025-04-14 22:29:20,513 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-15 08:41:24 (54695): Guest Log: 2025-04-14 22:29:20,645 [wrapper] ==== pilot stdout END ====
2025-04-15 08:41:24 (54695): Guest Log: 2025-04-14 22:29:20,660 [wrapper] ==== wrapper stdout RESUME ====
2025-04-15 08:41:24 (54695): Guest Log: 2025-04-14 22:29:20,673 [wrapper] pilotpid: 5951
2025-04-15 08:41:24 (54695): Guest Log: 2025-04-14 22:29:20,687 [wrapper] Pilot exit status: 0
2025-04-15 08:41:24 (54695): Guest Log: 2025-04-14 22:29:21,530 [wrapper] pandaids: 6602113176
2025-04-15 08:41:24 (54695): Guest Log: 2025-04-14 22:29:21,622 [wrapper] cleanup supervisor_pilot 28451 5952
2025-04-15 08:41:24 (54695): Guest Log: 2025-04-14 22:29:21,632 [wrapper] Test setup, not cleaning
2025-04-15 08:41:24 (54695): Guest Log: 2025-04-14 22:29:21,646 [wrapper] apfmon messages muted
2025-04-15 08:41:24 (54695): Guest Log: 2025-04-14 22:29:21,659 [wrapper] ==== wrapper stdout END ====
2025-04-15 08:41:24 (54695): Guest Log: 2025-04-14 22:29:21,672 [wrapper] ==== wrapper stderr END ====
2025-04-15 08:41:24 (54695): Guest Log:  *** Error codes and diagnostics ***
2025-04-15 08:41:24 (54695): Guest Log:     "exeErrorCode": 0,
2025-04-15 08:41:24 (54695): Guest Log:     "exeErrorDiag": "",
2025-04-15 08:41:24 (54695): Guest Log:     "pilotErrorCode": 0,
2025-04-15 08:41:24 (54695): Guest Log:     "pilotErrorDiag": "",
2025-04-15 08:41:24 (54695): Guest Log:  *** Listing of results directory ***
2025-04-15 08:41:24 (54695): Guest Log: total 195604
2025-04-15 08:41:24 (54695): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 14 02:25 pilot3.tar.gz
2025-04-15 08:41:24 (54695): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 14 02:38 runpilot2-wrapper.sh
2025-04-15 08:41:24 (54695): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 14 02:39 queuedata.json
2025-04-15 08:41:24 (54695): Guest Log: -rw-r-----. 1 atlas atlas     17569 Apr 14 14:07 start_atlas.sh
2025-04-15 08:41:24 (54695): Guest Log: -rw-r-----. 1 atlas atlas    508891 Apr 14 14:07 input.tar.gz
2025-04-15 08:41:24 (54695): Guest Log: -rw-r--r--. 1 atlas atlas      6165 Apr 14 14:07 init_data.xml
2025-04-15 08:41:24 (54695): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 14 14:07 EVNT.44075481._000467.pool.root.1 -> /data/./ATLAS.root_0
2025-04-15 08:41:24 (54695): Guest Log: -rw-r--r--. 1 atlas atlas      2578 Apr 14 14:07 pandaJob.out
2025-04-15 08:41:24 (54695): Guest Log: -rw-------. 1 atlas atlas       424 Apr 14 14:08 setup.sh.local
2025-04-15 08:41:24 (54695): Guest Log: -rw-------. 1 atlas atlas    986127 Apr 14 14:11 agis_schedconf.cvmfs.json
2025-04-15 08:41:24 (54695): Guest Log: drwx------. 4 atlas atlas      4096 Apr 14 14:11 pilot3
2025-04-15 08:41:24 (54695): Guest Log: -rw-------. 1 atlas atlas 191992482 Apr 14 22:27 HITS.44075483._011879.pool.root.1
2025-04-15 08:41:24 (54695): Guest Log: -rw-------. 1 atlas atlas      1031 Apr 14 22:28 memory_monitor_summary.json
2025-04-15 08:41:24 (54695): Guest Log: -rw-------. 1 atlas atlas   1603529 Apr 14 22:28 agis_ddmendpoints.agis.ALL.json
2025-04-15 08:41:24 (54695): Guest Log: -rw-------. 1 atlas atlas    415212 Apr 14 22:28 log.44075483._011879.job.log.tgz.1
2025-04-15 08:41:24 (54695): Guest Log: -rw-------. 1 atlas atlas        95 Apr 14 22:28 pilot_heartbeat.json
2025-04-15 08:41:24 (54695): Guest Log: -rw-------. 1 atlas atlas      7696 Apr 14 22:29 heartbeat.json
2025-04-15 08:41:24 (54695): Guest Log: -rw-------. 1 atlas atlas      4536 Apr 14 22:29 pilotlog.txt
2025-04-15 08:41:24 (54695): Guest Log: -rw-------. 1 atlas atlas   1849725 Apr 14 22:29 log.44075483._011879.job.log.1
2025-04-15 08:41:24 (54695): Guest Log: -rw-------. 1 atlas atlas       357 Apr 14 22:29 output.list
2025-04-15 08:41:24 (54695): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 14 22:29 runtime_log
2025-04-15 08:41:24 (54695): Guest Log: -rw-------. 1 atlas atlas   2283520 Apr 14 22:29 result.tar.gz
2025-04-15 08:41:24 (54695): Guest Log: -rw-r--r--. 1 atlas atlas     10962 Apr 14 22:29 runtime_log.err
2025-04-15 08:41:24 (54695): Guest Log: -rw-------. 1 atlas atlas       670 Apr 14 22:29 G24LDmwtOO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCLVLDmA4kgUm.diag
2025-04-15 08:41:24 (54695): Guest Log: Looking for outputfile HITS.44075483._011879.pool.root.1
2025-04-15 08:41:24 (54695): Guest Log: HITS file was successfully produced
2025-04-15 08:41:24 (54695): Guest Log: -rw-------. 1 atlas atlas 191992482 Apr 14 22:27 /home/atlas/RunAtlas/HITS.44075483._011879.pool.root.1
2025-04-15 08:41:25 (54695): Guest Log: Successfully finished the ATLAS job!
2025-04-15 08:41:25 (54695): Guest Log: Copying the results back to the shared directory!
2025-04-15 08:41:25 (54695): Guest Log:  *** Contents of shared directory: ***
2025-04-15 08:41:25 (54695): Guest Log: total 225096
2025-04-15 08:41:25 (54695): Guest Log: -rw-rw----. 1 root root 221460569 Apr 14 14:06 ATLAS.root_0
2025-04-15 08:41:25 (54695): Guest Log: -rw-rw-r--. 1 root root      6165 Apr 14 14:06 init_data.xml
2025-04-15 08:41:25 (54695): Guest Log: -rw-rw----. 1 root root    508891 Apr 14 14:06 input.tar.gz
2025-04-15 08:41:25 (54695): Guest Log: -rw-r--r--. 1 root root   2283520 Apr 14  2025 result.tar.gz
2025-04-15 08:41:25 (54695): Guest Log: -rw-rw----. 1 root root     17569 Apr 14 14:06 start_atlas.sh
2025-04-15 08:41:25 (54695): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-15 08:41:25 (54695): VM Completion File Detected.
2025-04-15 08:41:25 (54695): Powering off VM.
2025-04-15 08:41:26 (54695): Successfully stopped VM.
2025-04-15 08:41:26 (54695): Deregistering VM. (boinc_fb22e0c64d950396, slot#0)
2025-04-15 08:41:26 (54695): Removing network bandwidth throttle group from VM.
2025-04-15 08:41:26 (54695): Removing VM from VirtualBox.
08:41:32 (54695): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN