Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:36:39 (32418): wrapper (7.7.26015): starting
02:36:39 (32418): wrapper: running run_atlas (--nthreads 10)
[2025-04-14 02:36:39] Arguments: --nthreads 10
[2025-04-14 02:36:39] Threads: 10
[2025-04-14 02:36:39] Checking for CVMFS
[2025-04-14 02:36:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-14 02:36:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-14 02:36:41] Running cvmfs_config stat atlas.cern.ch
[2025-04-14 02:36:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-14 02:36:42] 2.11.2.0 12223 21298 123048 144839 2 111 11389751 18432000 9206 130560 0 46071838 98.527 153682104 39276 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-14 02:36:42] CVMFS is ok
[2025-04-14 02:36:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-14 02:36:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-14 02:36:42] Further information can be found at the LHC@home message board.
[2025-04-14 02:36:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-14 02:36:42] Checking for apptainer binary...
[2025-04-14 02:36:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-14 02:36:42] Running /usr/bin/apptainer --version
[2025-04-14 02:36:43] apptainer version 1.3.2-1.el7
[2025-04-14 02:36:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-14 02:37:07] c-210-19.aglt2.org
[2025-04-14 02:37:07] apptainer works
[2025-04-14 02:37:07] Set ATHENA_PROC_NUMBER=10
[2025-04-14 02:37:07] Set ATHENA_CORE_NUMBER=10
[2025-04-14 02:37:07] Starting ATLAS job with PandaID=6602102377
[2025-04-14 02:37:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-14 09:43:28]  *** The last 200 lines of the pilot log: ***
[2025-04-14 09:43:28] 2025-04-14 13:43:07,670 | INFO     | chi2: 10.888188400770332
[2025-04-14 09:43:28] 2025-04-14 13:43:07,670 | INFO     | current chi2=10.888188400770332 (change=12.196411978978698 %)
[2025-04-14 09:43:28] 2025-04-14 13:43:07,671 | INFO     | right removable region: 404
[2025-04-14 09:43:28] 2025-04-14 13:43:07,671 | INFO     | sum of square deviations: 20598277001.664246
[2025-04-14 09:43:28] 2025-04-14 13:43:07,676 | INFO     | sum of deviations: 320295322802.10596
[2025-04-14 09:43:28] 2025-04-14 13:43:07,676 | INFO     | mean x: 1744625792.7308643
[2025-04-14 09:43:28] 2025-04-14 13:43:07,676 | INFO     | mean y: 2498504.239506173
[2025-04-14 09:43:28] 2025-04-14 13:43:07,676 | INFO     | -- intersect: -27125764767.803303
[2025-04-14 09:43:28] 2025-04-14 13:43:07,677 | INFO     | intersect: -27125764767.803303
[2025-04-14 09:43:28] 2025-04-14 13:43:07,677 | INFO     | chi2: 7.828738653958834
[2025-04-14 09:43:28] 2025-04-14 13:43:07,677 | INFO     | current chi2=7.828738653958834 (change=36.868162251140525 %)
[2025-04-14 09:43:28] 2025-04-14 13:43:07,678 | INFO     | sum of square deviations: 19844647008.959923
[2025-04-14 09:43:28] 2025-04-14 13:43:07,682 | INFO     | sum of deviations: 209021287895.07968
[2025-04-14 09:43:28] 2025-04-14 13:43:07,682 | INFO     | mean x: 1744625945.24
[2025-04-14 09:43:28] 2025-04-14 13:43:07,682 | INFO     | mean y: 2521008.02
[2025-04-14 09:43:28] 2025-04-14 13:43:07,683 | INFO     | -- intersect: -18373414920.92792
[2025-04-14 09:43:28] 2025-04-14 13:43:07,683 | INFO     | intersect: -18373414920.92792
[2025-04-14 09:43:28] 2025-04-14 13:43:07,683 | INFO     | chi2: 5.115243455987852
[2025-04-14 09:43:28] 2025-04-14 13:43:07,684 | INFO     | current chi2=5.115243455987852 (change=34.66069462669854 %)
[2025-04-14 09:43:28] 2025-04-14 13:43:07,684 | INFO     | sum of square deviations: 19109646660.68359
[2025-04-14 09:43:28] 2025-04-14 13:43:07,688 | INFO     | sum of deviations: 123217323349.39235
[2025-04-14 09:43:28] 2025-04-14 13:43:07,689 | INFO     | mean x: 1744626097.7468355
[2025-04-14 09:43:28] 2025-04-14 13:43:07,689 | INFO     | mean y: 2538805.5139240506
[2025-04-14 09:43:28] 2025-04-14 13:43:07,689 | INFO     | -- intersect: -11246657049.694557
[2025-04-14 09:43:28] 2025-04-14 13:43:07,689 | INFO     | intersect: -11246657049.694557
[2025-04-14 09:43:28] 2025-04-14 13:43:07,690 | INFO     | chi2: 3.5666189541676707
[2025-04-14 09:43:28] 2025-04-14 13:43:07,690 | INFO     | current chi2=3.5666189541676707 (change=30.27469787400593 %)
[2025-04-14 09:43:28] 2025-04-14 13:43:07,690 | INFO     | sum of square deviations: 18392994410.358913
[2025-04-14 09:43:28] 2025-04-14 13:43:07,695 | INFO     | sum of deviations: 46192978279.4102
[2025-04-14 09:43:28] 2025-04-14 13:43:07,695 | INFO     | mean x: 1744626250.2564104
[2025-04-14 09:43:28] 2025-04-14 13:43:07,695 | INFO     | mean y: 2555197.035897436
[2025-04-14 09:43:28] 2025-04-14 13:43:07,695 | INFO     | -- intersect: -4378976199.417707
[2025-04-14 09:43:28] 2025-04-14 13:43:07,695 | INFO     | intersect: -4378976199.417707
[2025-04-14 09:43:28] 2025-04-14 13:43:07,696 | INFO     | chi2: 2.3233674361100682
[2025-04-14 09:43:28] 2025-04-14 13:43:07,696 | INFO     | current chi2=2.3233674361100682 (change=34.85798550486691 %)
[2025-04-14 09:43:28] 2025-04-14 13:43:07,697 | INFO     | sum of square deviations: 17694505703.49095
[2025-04-14 09:43:28] 2025-04-14 13:43:07,701 | INFO     | sum of deviations: 295042670.3635788
[2025-04-14 09:43:28] 2025-04-14 13:43:07,702 | INFO     | mean x: 1744626402.7636364
[2025-04-14 09:43:28] 2025-04-14 13:43:07,702 | INFO     | mean y: 2565193.883116883
[2025-04-14 09:43:28] 2025-04-14 13:43:07,702 | INFO     | -- intersect: -26525148.694615304
[2025-04-14 09:43:28] 2025-04-14 13:43:07,702 | INFO     | intersect: -26525148.694615304
[2025-04-14 09:43:28] 2025-04-14 13:43:07,703 | INFO     | chi2: 1.8247661570961782
[2025-04-14 09:43:28] 2025-04-14 13:43:07,703 | INFO     | current chi2=1.8247661570961782 (change=21.460285242212077 %)
[2025-04-14 09:43:28] 2025-04-14 13:43:07,703 | INFO     | left removable region: 50
[2025-04-14 09:43:28] 2025-04-14 13:43:07,704 | INFO     | sum of square deviations: 13754826204.658218
[2025-04-14 09:43:28] 2025-04-14 13:43:07,708 | INFO     | sum of deviations: 2246120989.248588
[2025-04-14 09:43:28] 2025-04-14 13:43:07,708 | INFO     | mean x: 1744626982.30226
[2025-04-14 09:43:28] 2025-04-14 13:43:07,708 | INFO     | mean y: 2588789.6892655366
[2025-04-14 09:43:28] 2025-04-14 13:43:07,708 | INFO     | -- intersect: -282303452.86276615
[2025-04-14 09:43:28] 2025-04-14 13:43:07,708 | INFO     | intersect: -282303452.86276615
[2025-04-14 09:43:28] 2025-04-14 13:43:07,709 | INFO     | chi2: 0.0013126908648853285
[2025-04-14 09:43:28] 2025-04-14 13:43:07,709 | INFO     | -- intersect: -282303452.86276615
[2025-04-14 09:43:28] 2025-04-14 13:43:07,709 | INFO     | current memory leak: 0.16 B/s (using 354 data points, chi2=0.00)
[2025-04-14 09:43:28] 2025-04-14 13:43:07,710 | INFO     | ..............................
[2025-04-14 09:43:28] 2025-04-14 13:43:07,710 | INFO     | . Timing measurements:
[2025-04-14 09:43:28] 2025-04-14 13:43:07,711 | INFO     | . get job = 0 s
[2025-04-14 09:43:28] 2025-04-14 13:43:07,711 | INFO     | . initial setup = 15 s
[2025-04-14 09:43:28] 2025-04-14 13:43:07,711 | INFO     | . payload setup = 124 s
[2025-04-14 09:43:28] 2025-04-14 13:43:07,711 | INFO     | . stage-in = 0 s
[2025-04-14 09:43:28] 2025-04-14 13:43:07,711 | INFO     | . payload execution = 25067 s
[2025-04-14 09:43:28] 2025-04-14 13:43:07,711 | INFO     | . stage-out = 7 s
[2025-04-14 09:43:28] 2025-04-14 13:43:07,711 | INFO     | . log creation = 2 s
[2025-04-14 09:43:28] 2025-04-14 13:43:07,711 | INFO     | ..............................
[2025-04-14 09:43:28] 2025-04-14 13:43:08,382 | INFO     | 
[2025-04-14 09:43:28] 2025-04-14 13:43:08,383 | INFO     | job summary report
[2025-04-14 09:43:28] 2025-04-14 13:43:08,384 | INFO     | --------------------------------------------------
[2025-04-14 09:43:28] 2025-04-14 13:43:08,385 | INFO     | PanDA job id: 6602102377
[2025-04-14 09:43:28] 2025-04-14 13:43:08,385 | INFO     | task id: 44075483
[2025-04-14 09:43:28] 2025-04-14 13:43:08,386 | INFO     | errors: (none)
[2025-04-14 09:43:28] 2025-04-14 13:43:08,387 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-14 09:43:28] 2025-04-14 13:43:08,387 | INFO     | pilot state: finished 
[2025-04-14 09:43:28] 2025-04-14 13:43:08,388 | INFO     | transexitcode: 0
[2025-04-14 09:43:28] 2025-04-14 13:43:08,388 | INFO     | exeerrorcode: 0
[2025-04-14 09:43:28] 2025-04-14 13:43:08,389 | INFO     | exeerrordiag: 
[2025-04-14 09:43:28] 2025-04-14 13:43:08,389 | INFO     | exitcode: 0
[2025-04-14 09:43:28] 2025-04-14 13:43:08,389 | INFO     | exitmsg: OK
[2025-04-14 09:43:28] 2025-04-14 13:43:08,390 | INFO     | cpuconsumptiontime: 55408 s
[2025-04-14 09:43:28] 2025-04-14 13:43:08,390 | INFO     | nevents: 400
[2025-04-14 09:43:28] 2025-04-14 13:43:08,390 | INFO     | neventsw: 0
[2025-04-14 09:43:28] 2025-04-14 13:43:08,391 | INFO     | pid: 15804
[2025-04-14 09:43:28] 2025-04-14 13:43:08,391 | INFO     | pgrp: 15804
[2025-04-14 09:43:28] 2025-04-14 13:43:08,391 | INFO     | corecount: 10
[2025-04-14 09:43:28] 2025-04-14 13:43:08,392 | INFO     | event service: False
[2025-04-14 09:43:28] 2025-04-14 13:43:08,392 | INFO     | sizes: {0: 2416532, 2: 2417133, 3: 2417245, 4: 2417444, 15: 2417444, 26: 2417472, 37: 2417628, 48: 2417656, 59: 2417684, 61: 2417918, 70: 2417946, 25197: 2453160, 
[2025-04-14 09:43:28] 2025-04-14 13:43:08,395 | INFO     | --------------------------------------------------
[2025-04-14 09:43:28] 2025-04-14 13:43:08,395 | INFO     | 
[2025-04-14 09:43:28] 2025-04-14 13:43:08,396 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-14 09:43:28] 2025-04-14 13:43:08,578 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-14 09:43:28] 2025-04-14 13:43:08,595 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-14 09:43:28] 2025-04-14 13:43:08,595 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-14 09:43:28] 2025-04-14 13:43:08,595 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-14 09:43:28] 2025-04-14 13:43:08,595 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-14 09:43:28] 2025-04-14 13:43:08,595 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-14 09:43:28] 2025-04-14 13:43:08,595 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-14 09:43:28] 2025-04-14 13:43:08,595 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-14 09:43:28] 2025-04-14 13:43:08,595 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-14 09:43:28] 2025-04-14 13:43:08,596 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-14 09:43:28] 2025-04-14 13:43:08,596 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-14 09:43:28] 2025-04-14 13:43:08,596 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-14 09:43:28] 2025-04-14 13:43:08,596 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-14 09:43:28] 2025-04-14 13:43:08,596 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-14 09:43:28] 2025-04-14 13:43:08,617 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-14 09:43:28] 2025-04-14 13:43:08,618 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-14 09:43:28] 2025-04-14 13:43:08,618 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-14 09:43:28] 2025-04-14 13:43:08,618 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-14 09:43:28] 2025-04-14 13:43:08,618 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-14 09:43:28] 2025-04-14 13:43:08,618 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-14 09:43:28] 2025-04-14 13:43:08,631 | INFO     | job 6602102377 has completed (purged errors)
[2025-04-14 09:43:28] 2025-04-14 13:43:08,631 | INFO     | overall cleanup function is called
[2025-04-14 09:43:28] 2025-04-14 13:43:09,675 | INFO     | --- collectZombieJob: --- 10, [15804]
[2025-04-14 09:43:28] 2025-04-14 13:43:09,675 | INFO     | zombie collector waiting for pid 15804
[2025-04-14 09:43:28] 2025-04-14 13:43:09,676 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-14 09:43:28] 2025-04-14 13:43:09,676 | INFO     | collected zombie processes
[2025-04-14 09:43:28] 2025-04-14 13:43:09,676 | INFO     | will attempt to kill all subprocesses of pid=15804
[2025-04-14 09:43:28] 2025-04-14 13:43:10,349 | INFO     | 25414s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-14 09:43:28] 2025-04-14 13:43:11,159 | INFO     | process IDs to be killed: [15804] (in reverse order)
[2025-04-14 09:43:28] 2025-04-14 13:43:11,998 | WARNING  | found no corresponding commands to process id(s)
[2025-04-14 09:43:28] 2025-04-14 13:43:11,998 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-14 09:43:28] 2025-04-14 13:43:12,009 | INFO     | did not find any defunct processes belonging to 15804
[2025-04-14 09:43:28] 2025-04-14 13:43:12,023 | INFO     | did not find any defunct processes belonging to 15804
[2025-04-14 09:43:28] 2025-04-14 13:43:12,024 | INFO     | ready for new job
[2025-04-14 09:43:28] 2025-04-14 13:43:12,024 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-14 09:43:28] 2025-04-14 13:43:12,027 | INFO     | **************************************
[2025-04-14 09:43:28] 2025-04-14 13:43:12,027 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-14 09:43:28] 2025-04-14 13:43:12,027 | INFO     | **************************************
[2025-04-14 09:43:28] 2025-04-14 13:43:12,027 | INFO     | 
[2025-04-14 09:43:28] 2025-04-14 13:43:12,030 | INFO     | architecture information:
[2025-04-14 09:43:28] 2025-04-14 13:43:12,031 | INFO     | executing command: cat /etc/os-release
[2025-04-14 09:43:28] 2025-04-14 13:43:12,053 | INFO     | cat /etc/os-release:
[2025-04-14 09:43:28] NAME="CentOS Linux"
[2025-04-14 09:43:28] VERSION="7 (Core)"
[2025-04-14 09:43:28] ID="centos"
[2025-04-14 09:43:28] ID_LIKE="rhel fedora"
[2025-04-14 09:43:28] VERSION_ID="7"
[2025-04-14 09:43:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-14 09:43:28] ANSI_COLOR="0;31"
[2025-04-14 09:43:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-14 09:43:28] HOME_URL="https://www.centos.org/"
[2025-04-14 09:43:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-14 09:43:28] 
[2025-04-14 09:43:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-14 09:43:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-14 09:43:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-14 09:43:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-14 09:43:28] 
[2025-04-14 09:43:28] 2025-04-14 13:43:12,053 | INFO     | **************************************
[2025-04-14 09:43:28] 2025-04-14 13:43:12,556 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-14 09:43:28] 2025-04-14 13:43:12,723 | INFO     | sufficient remaining disk space (56995348480 B)
[2025-04-14 09:43:28] 2025-04-14 13:43:12,724 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-14 09:43:28] 2025-04-14 13:43:12,724 | INFO     | current server update state: UPDATING_FINAL
[2025-04-14 09:43:28] 2025-04-14 13:43:12,724 | INFO     | update_server=False
[2025-04-14 09:43:28] 2025-04-14 13:43:12,743 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-14 09:43:28] 2025-04-14 13:43:12,751 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-14 09:43:28] 2025-04-14 13:43:12,807 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-14 09:43:28] 2025-04-14 13:43:12,808 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-14 09:43:28] 2025-04-14 13:43:12,808 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-14 09:43:28] 2025-04-14 13:43:12,808 | INFO     | will abort loop
[2025-04-14 09:43:28] 2025-04-14 13:43:13,111 | INFO     | all job control threads have been joined
[2025-04-14 09:43:28] 2025-04-14 13:43:13,193 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-14 09:43:28] 2025-04-14 13:43:13,278 | INFO     | all data control threads have been joined
[2025-04-14 09:43:28] 2025-04-14 13:43:13,757 | INFO     | [job] retrieve thread has finished
[2025-04-14 09:43:28] 2025-04-14 13:43:13,821 | INFO     | [job] job monitor thread has finished
[2025-04-14 09:43:28] 2025-04-14 13:43:13,891 | INFO     | all payload control threads have been joined
[2025-04-14 09:43:28] 2025-04-14 13:43:13,899 | INFO     | [payload] failed_post thread has finished
[2025-04-14 09:43:28] 2025-04-14 13:43:14,033 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-14 09:43:28] 2025-04-14 13:43:14,130 | INFO     | [job] control thread has finished
[2025-04-14 09:43:28] 2025-04-14 13:43:14,160 | INFO     | [payload] validate_post thread has finished
[2025-04-14 09:43:28] 2025-04-14 13:43:14,178 | INFO     | PID=39486 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-14 09:43:28] 2025-04-14 13:43:14,178 | INFO     | .. there are 12 such processes running
[2025-04-14 09:43:28] 2025-04-14 13:43:14,178 | INFO     | found 0 job(s) in 20 queues
[2025-04-14 09:43:28] 2025-04-14 13:43:14,178 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-14 09:43:28] 2025-04-14 13:43:14,178 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-14 09:43:28] 2025-04-14 13:43:14,199 | INFO     | [job] queue monitor thread has finished
[2025-04-14 09:43:28] 2025-04-14 13:43:14,284 | INFO     | [data] control thread has finished
[2025-04-14 09:43:28] 2025-04-14 13:43:14,418 | INFO     | [payload] validate_pre thread has finished
[2025-04-14 09:43:28] 2025-04-14 13:43:14,423 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-14 09:43:28] 2025-04-14 13:43:14,424 | INFO     | [job] validate thread has finished
[2025-04-14 09:43:28] 2025-04-14 13:43:14,763 | INFO     | [data] copytool_out thread has finished
[2025-04-14 09:43:28] 2025-04-14 13:43:14,897 | INFO     | [payload] control thread has finished
[2025-04-14 09:43:28] 2025-04-14 13:43:14,964 | INFO     | [job] create_data_payload thread has finished
[2025-04-14 09:43:28] 2025-04-14 13:43:14,974 | INFO     | [data] copytool_in thread has finished
[2025-04-14 09:43:28] 2025-04-14 13:43:14,980 | INFO     | [payload] execute_payloads thread has finished
[2025-04-14 09:43:28] 2025-04-14 13:43:18,042 | INFO     | [data] queue_monitor thread has finished
[2025-04-14 09:43:28] 2025-04-14 13:43:19,512 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139794783692608)>', '<ExcThread(monitor, started 139794556794624)>']
[2025-04-14 09:43:28] 2025-04-14 13:43:20,214 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-14 09:43:28] 2025-04-14 13:43:20,214 | INFO     | [monitor] control thread has ended
[2025-04-14 09:43:28] 2025-04-14 13:43:24,538 | INFO     | all workflow threads have been joined
[2025-04-14 09:43:28] 2025-04-14 13:43:24,539 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-14 09:43:28] 2025-04-14 13:43:24,539 | INFO     | traces error code: 0
[2025-04-14 09:43:28] 2025-04-14 13:43:24,539 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-14 09:43:28] 2025-04-14 13:43:26,004 [wrapper] ==== pilot stdout END ====
[2025-04-14 09:43:28] 2025-04-14 13:43:26,016 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-14 09:43:28] 2025-04-14 13:43:26,060 [wrapper] pilotpid: 39486
[2025-04-14 09:43:28] 2025-04-14 13:43:26,105 [wrapper] Pilot exit status: 0
[2025-04-14 09:43:28] 2025-04-14 13:43:26,283 [wrapper] pandaids: 6602102377
[2025-04-14 09:43:28] 2025-04-14 13:43:26,834 [wrapper] cleanup supervisor_pilot 38364 39487
[2025-04-14 09:43:28] 2025-04-14 13:43:26,897 [wrapper] Test setup, not cleaning
[2025-04-14 09:43:28] 2025-04-14 13:43:26,911 [wrapper] apfmon messages muted
[2025-04-14 09:43:28] 2025-04-14 13:43:26,953 [wrapper] ==== wrapper stdout END ====
[2025-04-14 09:43:28] 2025-04-14 13:43:26,999 [wrapper] ==== wrapper stderr END ====
[2025-04-14 09:43:28]  *** Error codes and diagnostics ***
[2025-04-14 09:43:28]     "exeErrorCode": 0,
[2025-04-14 09:43:28]     "exeErrorDiag": "",
[2025-04-14 09:43:28]     "pilotErrorCode": 0,
[2025-04-14 09:43:28]     "pilotErrorDiag": "",
[2025-04-14 09:43:28]  *** Listing of results directory ***
[2025-04-14 09:43:28] total 419316
[2025-04-14 09:43:28] -rw-r--r-- 1 boincer umatlas    495897 Apr 13 16:09 pilot3.tar.gz
[2025-04-14 09:43:28] -rwx------ 1 boincer umatlas     37140 Apr 13 16:47 runpilot2-wrapper.sh
[2025-04-14 09:43:28] -rw-r--r-- 1 boincer umatlas      5111 Apr 13 16:47 queuedata.json
[2025-04-14 09:43:28] -rw-r--r-- 1 boincer umatlas       100 Apr 14 02:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-14 09:43:28] -rwxr-xr-x 1 boincer umatlas      7986 Apr 14 02:36 run_atlas
[2025-04-14 09:43:28] -rw-r--r-- 1 boincer umatlas       105 Apr 14 02:36 job.xml
[2025-04-14 09:43:28] -rw-r--r-- 2 boincer umatlas 223760006 Apr 14 02:36 EVNT.44075481._000352.pool.root.1
[2025-04-14 09:43:28] -rw-r--r-- 2 boincer umatlas     17569 Apr 14 02:36 start_atlas.sh
[2025-04-14 09:43:28] drwxrwx--x 2 boincer umatlas      4096 Apr 14 02:36 shared
[2025-04-14 09:43:28] -rw-r--r-- 2 boincer umatlas    508889 Apr 14 02:36 input.tar.gz
[2025-04-14 09:43:28] -rw-r--r-- 1 boincer umatlas         0 Apr 14 02:36 boinc_lockfile
[2025-04-14 09:43:28] -rw-r--r-- 1 boincer umatlas      2576 Apr 14 02:37 pandaJob.out
[2025-04-14 09:43:28] -rw------- 1 boincer umatlas       424 Apr 14 02:37 setup.sh.local
[2025-04-14 09:43:28] -rw------- 1 boincer umatlas    981870 Apr 14 02:39 agis_schedconf.cvmfs.json
[2025-04-14 09:43:28] drwx------ 4 boincer umatlas      4096 Apr 14 02:39 pilot3
[2025-04-14 09:43:28] -rw-r--r-- 1 boincer umatlas      6144 Apr 14 09:38 init_data.xml
[2025-04-14 09:43:28] -rw------- 1 boincer umatlas 196556772 Apr 14 09:39 HITS.44075483._009005.pool.root.1
[2025-04-14 09:43:28] -rw-r--r-- 1 boincer umatlas       531 Apr 14 09:40 boinc_task_state.xml
[2025-04-14 09:43:28] -rw------- 1 boincer umatlas      1063 Apr 14 09:41 memory_monitor_summary.json
[2025-04-14 09:43:28] -rw------- 1 boincer umatlas   1603529 Apr 14 09:42 agis_ddmendpoints.agis.ALL.json
[2025-04-14 09:43:28] -rw------- 1 boincer umatlas    532855 Apr 14 09:42 log.44075483._009005.job.log.tgz.1
[2025-04-14 09:43:28] -rw------- 1 boincer umatlas        95 Apr 14 09:42 pilot_heartbeat.json
[2025-04-14 09:43:28] -rw------- 1 boincer umatlas      7763 Apr 14 09:43 heartbeat.json
[2025-04-14 09:43:28] -rw------- 1 boincer umatlas      4932 Apr 14 09:43 pilotlog.txt
[2025-04-14 09:43:28] -rw-r--r-- 1 boincer umatlas      8192 Apr 14 09:43 boinc_mmap_file
[2025-04-14 09:43:28] -rw-r--r-- 1 boincer umatlas        28 Apr 14 09:43 wrapper_checkpoint.txt
[2025-04-14 09:43:28] -rw------- 1 boincer umatlas   2077085 Apr 14 09:43 log.44075483._009005.job.log.1
[2025-04-14 09:43:28] -rw------- 1 boincer umatlas       357 Apr 14 09:43 output.list
[2025-04-14 09:43:28] -rw-r--r-- 1 boincer umatlas       620 Apr 14 09:43 runtime_log
[2025-04-14 09:43:28] -rw------- 1 boincer umatlas   2631680 Apr 14 09:43 result.tar.gz
[2025-04-14 09:43:28] -rw------- 1 boincer umatlas       663 Apr 14 09:43 W9tMDmgPJO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCmULDm2Xvurn.diag
[2025-04-14 09:43:28] -rw-r--r-- 1 boincer umatlas     11016 Apr 14 09:43 runtime_log.err
[2025-04-14 09:43:28] -rw-r--r-- 1 boincer umatlas     21083 Apr 14 09:43 stderr.txt
[2025-04-14 09:43:28] HITS file was successfully produced:
[2025-04-14 09:43:28] -rw------- 1 boincer umatlas 196556772 Apr 14 09:39 shared/HITS.pool.root.1
[2025-04-14 09:43:28]  *** Contents of shared directory: ***
[2025-04-14 09:43:28] total 413564
[2025-04-14 09:43:28] -rw-r--r-- 2 boincer umatlas 223760006 Apr 14 02:36 ATLAS.root_0
[2025-04-14 09:43:28] -rw-r--r-- 2 boincer umatlas     17569 Apr 14 02:36 start_atlas.sh
[2025-04-14 09:43:28] -rw-r--r-- 2 boincer umatlas    508889 Apr 14 02:36 input.tar.gz
[2025-04-14 09:43:28] -rw------- 1 boincer umatlas 196556772 Apr 14 09:39 HITS.pool.root.1
[2025-04-14 09:43:28] -rw------- 1 boincer umatlas   2631680 Apr 14 09:43 result.tar.gz
09:43:29 (32418): run_atlas exited; CPU time 55955.227798
09:43:29 (32418): called boinc_finish(0)

</stderr_txt>
]]>

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