Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-13 22:40:42 (11892): Detected: vboxwrapper 26206
2025-04-13 22:40:42 (11892): Detected: BOINC client v7.16.11
2025-04-13 22:40:43 (11892): Detected: VirtualBox VboxManage Interface (Version: 6.1.14)
2025-04-13 22:40:43 (11892): Successfully copied 'init_data.xml' to the shared directory.
2025-04-13 22:40:44 (11892): Create VM. (boinc_aed69c5b9b802788, slot#2)
2025-04-13 22:40:44 (11892): Setting Memory Size for VM. (4600MB)
2025-04-13 22:40:44 (11892): Setting CPU Count for VM. (6)
2025-04-13 22:40:45 (11892): Setting Chipset Options for VM.
2025-04-13 22:40:45 (11892): Setting Graphics Controller Options for VM.
2025-04-13 22:40:45 (11892): Setting Boot Options for VM.
2025-04-13 22:40:45 (11892): Setting Network Configuration for NAT.
2025-04-13 22:40:46 (11892): Enabling VM Network Access.
2025-04-13 22:40:46 (11892): Disabling USB Support for VM.
2025-04-13 22:40:46 (11892): Disabling COM Port Support for VM.
2025-04-13 22:40:46 (11892): Disabling LPT Port Support for VM.
2025-04-13 22:40:47 (11892): Disabling Audio Support for VM.
2025-04-13 22:40:47 (11892): Disabling Clipboard Support for VM.
2025-04-13 22:40:47 (11892): Disabling Drag and Drop Support for VM.
2025-04-13 22:40:48 (11892): Adding storage controller(s) to VM.
2025-04-13 22:40:48 (11892): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-13 22:40:48 (11892): Adding VirtualBox Guest Additions to VM.
2025-04-13 22:40:49 (11892): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-13 22:40:49 (11892): forwarding host port 51328 to guest port 80
2025-04-13 22:40:49 (11892): Enabling remote desktop for VM.
2025-04-13 22:40:50 (11892): Enabling shared directory for VM.
2025-04-13 22:40:50 (11892): Starting VM using VBoxManage interface. (boinc_aed69c5b9b802788, slot#2)
2025-04-13 22:40:56 (11892): Successfully started VM. (PID = '9428')
2025-04-13 22:40:56 (11892): Reporting VM Process ID to BOINC.
2025-04-13 22:40:56 (11892): Guest Log: BIOS: VirtualBox 6.1.14
2025-04-13 22:40:56 (11892): Guest Log: CPUID EDX: 0x178bfbff
2025-04-13 22:40:56 (11892): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-13 22:40:56 (11892): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-13 22:40:56 (11892): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-13 22:40:56 (11892): Detected: Web Application Enabled (http://localhost:51328)
2025-04-13 22:40:56 (11892): Detected: Remote Desktop Enabled (localhost:51342)
2025-04-13 22:40:56 (11892): Preference change detected
2025-04-13 22:40:56 (11892): Setting CPU throttle for VM. (80%)
2025-04-13 22:40:56 (11892): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-13 22:40:58 (11892): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-13 22:40:58 (11892): Guest Log: BIOS: Booting from Hard Disk...
2025-04-13 22:41:01 (11892): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-13 22:41:01 (11892): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-13 22:41:01 (11892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-13 22:41:12 (11892): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-13 22:41:12 (11892): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-13 22:41:22 (11892): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-13 22:41:22 (11892): Guest Log: 00:00:00.000252 main     Log opened 2025-04-13T22:41:19.819758000Z
2025-04-13 22:41:22 (11892): Guest Log: 00:00:00.000398 main     OS Product: Linux
2025-04-13 22:41:22 (11892): Guest Log: 00:00:00.000457 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-13 22:41:22 (11892): Guest Log: 00:00:00.000508 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-13 22:41:22 (11892): Guest Log: 00:00:00.000559 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-13 22:41:22 (11892): Guest Log: 00:00:00.000561 main     Process ID: 1332
2025-04-13 22:41:22 (11892): Guest Log: 00:00:00.000562 main     Package type: LINUX_64BITS_GENERIC
2025-04-13 22:41:22 (11892): Guest Log: 00:00:00.002310 main     5.2.32 r132073 started. Verbose level = 0
2025-04-13 22:41:22 (11892): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-13 22:41:22 (11892): Guest Log: [INFO] Mounting shared directory
2025-04-13 22:41:22 (11892): Guest Log: [INFO] Checking for init_data.xml
2025-04-13 22:41:32 (11892): Guest Log: 00:00:10.006090 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 611 740 168 000ns (GuestNow=1 744 605 691 563 853 000 ns GuestLast=1 744 584 079 823 685 000 ns fSetTimeLastLoop=true )
2025-04-13 22:41:43 (11892): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-13 22:41:43 (11892): Guest Log: [INFO] Detected branch: prod
2025-04-13 22:41:43 (11892): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-13 22:41:43 (11892): Guest Log: Copying input files
2025-04-13 22:41:45 (11892): Guest Log: Copied input files into RunAtlas.
2025-04-13 22:41:45 (11892): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-13 22:41:45 (11892): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-13 22:41:45 (11892): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-13 22:41:45 (11892): Guest Log: Further information can be found at the LHC@home message board.
2025-04-13 22:41:55 (11892): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-13 22:41:56 (11892): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-13 22:41:56 (11892): Guest Log: 2.6.3.0 1613 0 30156 144836 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-13 22:41:57 (11892): Guest Log: copied the webapp to /var/www
2025-04-13 22:41:57 (11892): Guest Log: ATHENA_PROC_NUMBER=6
2025-04-13 22:41:57 (11892): Guest Log: ATHENA_CORE_NUMBER=6
2025-04-13 22:41:58 (11892): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-13 22:41:58 (11892): Guest Log:  *** Starting ATLAS job. (PandaID=6602095107 taskID=44075483) ***
2025-04-14 00:21:11 (11892): Status Report: Elapsed Time: '6000.000000'
2025-04-14 00:21:11 (11892): Status Report: CPU Time: '24849.734375'
2025-04-14 02:01:30 (11892): Status Report: Elapsed Time: '12000.000000'
2025-04-14 02:01:30 (11892): Status Report: CPU Time: '57061.390625'
2025-04-14 03:42:11 (11892): Status Report: Elapsed Time: '18000.566875'
2025-04-14 03:42:11 (11892): Status Report: CPU Time: '89433.562500'
2025-04-14 04:14:32 (11892): Guest Log:  *** Job finished ***
2025-04-14 04:14:32 (11892): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-14 04:14:32 (11892): Guest Log: 2025-04-14 10:14:18,389 | INFO     | [data] copytool_in thread has finished
2025-04-14 04:14:32 (11892): Guest Log: 2025-04-14 10:14:19,386 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-04-14 04:14:32 (11892): Guest Log: 2025-04-14 10:14:23,405 | INFO     | [data] queue_monitor thread has finished
2025-04-14 04:14:32 (11892): Guest Log: 2025-04-14 10:14:24,386 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140614711953216)>', '<ExcThread(monitor, started 140614117082880)>']
2025-04-14 04:14:32 (11892): Guest Log: 2025-04-14 10:14:25,143 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-14 04:14:32 (11892): Guest Log: 2025-04-14 10:14:25,144 | INFO     | [monitor] control thread has ended
2025-04-14 04:14:32 (11892): Guest Log: 2025-04-14 10:14:29,394 | INFO     | all workflow threads have been joined
2025-04-14 04:14:32 (11892): Guest Log: 2025-04-14 10:14:29,394 | INFO     | end of generic workflow (traces error code: 0)
2025-04-14 04:14:32 (11892): Guest Log: 2025-04-14 10:14:29,394 | INFO     | traces error code: 0
2025-04-14 04:14:32 (11892): Guest Log: 2025-04-14 10:14:29,394 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-14 04:14:32 (11892): Guest Log: 2025-04-14 10:14:29,516 [wrapper] ==== pilot stdout END ====
2025-04-14 04:14:32 (11892): Guest Log: 2025-04-14 10:14:29,523 [wrapper] ==== wrapper stdout RESUME ====
2025-04-14 04:14:32 (11892): Guest Log: 2025-04-14 10:14:29,528 [wrapper] pilotpid: 5970
2025-04-14 04:14:32 (11892): Guest Log: 2025-04-14 10:14:29,534 [wrapper] Pilot exit status: 0
2025-04-14 04:14:32 (11892): Guest Log: 2025-04-14 10:14:29,702 [wrapper] pandaids: 6602095107
2025-04-14 04:14:32 (11892): Guest Log: 2025-04-14 10:14:29,743 [wrapper] cleanup supervisor_pilot 24988 5971
2025-04-14 04:14:32 (11892): Guest Log: 2025-04-14 10:14:30,250 [wrapper] Test setup, not cleaning
2025-04-14 04:14:32 (11892): Guest Log: 2025-04-14 10:14:30,257 [wrapper] apfmon messages muted
2025-04-14 04:14:32 (11892): Guest Log: 2025-04-14 10:14:30,263 [wrapper] ==== wrapper stdout END ====
2025-04-14 04:14:32 (11892): Guest Log: 2025-04-14 10:14:30,269 [wrapper] ==== wrapper stderr END ====
2025-04-14 04:14:32 (11892): Guest Log:  *** Error codes and diagnostics ***
2025-04-14 04:14:32 (11892): Guest Log:     "exeErrorCode": 0,
2025-04-14 04:14:32 (11892): Guest Log:     "exeErrorDiag": "",
2025-04-14 04:14:32 (11892): Guest Log:     "pilotErrorCode": 0,
2025-04-14 04:14:32 (11892): Guest Log:     "pilotErrorDiag": "",
2025-04-14 04:14:32 (11892): Guest Log:  *** Listing of results directory ***
2025-04-14 04:14:32 (11892): Guest Log: total 201184
2025-04-14 04:14:32 (11892): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 13 15:09 pilot3.tar.gz
2025-04-14 04:14:32 (11892): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 13 15:19 queuedata.json
2025-04-14 04:14:32 (11892): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 13 15:19 runpilot2-wrapper.sh
2025-04-14 04:14:32 (11892): Guest Log: -rwxr-xr-x. 1 atlas atlas     11405 Apr 14 04:41 init_data.xml
2025-04-14 04:14:32 (11892): Guest Log: -rwxr-xr-x. 1 atlas atlas    508891 Apr 14 04:41 input.tar.gz
2025-04-14 04:14:32 (11892): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 14 04:41 start_atlas.sh
2025-04-14 04:14:32 (11892): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 14 04:41 EVNT.44075481._000235.pool.root.1 -> /data/./ATLAS.root_0
2025-04-14 04:14:32 (11892): Guest Log: -rw-r--r--. 1 atlas atlas      2576 Apr 14 04:41 pandaJob.out
2025-04-14 04:14:32 (11892): Guest Log: -rw-------. 1 atlas atlas       424 Apr 14 04:42 setup.sh.local
2025-04-14 04:14:32 (11892): Guest Log: -rw-------. 1 atlas atlas    985904 Apr 14 04:43 agis_schedconf.cvmfs.json
2025-04-14 04:14:32 (11892): Guest Log: drwx------. 4 atlas atlas      4096 Apr 14 04:43 pilot3
2025-04-14 04:14:32 (11892): Guest Log: -rw-------. 1 atlas atlas 198302841 Apr 14 10:13 HITS.44075483._006081.pool.root.1
2025-04-14 04:14:32 (11892): Guest Log: -rw-------. 1 atlas atlas        95 Apr 14 10:13 pilot_heartbeat.json
2025-04-14 04:14:32 (11892): Guest Log: -rw-------. 1 atlas atlas      1046 Apr 14 10:13 memory_monitor_summary.json
2025-04-14 04:14:32 (11892): Guest Log: -rw-------. 1 atlas atlas   1603529 Apr 14 10:13 agis_ddmendpoints.agis.ALL.json
2025-04-14 04:14:32 (11892): Guest Log: -rw-------. 1 atlas atlas    405004 Apr 14 10:13 log.44075483._006081.job.log.tgz.1
2025-04-14 04:14:32 (11892): Guest Log: -rw-------. 1 atlas atlas      7733 Apr 14 10:14 heartbeat.json
2025-04-14 04:14:32 (11892): Guest Log: -rw-------. 1 atlas atlas      4536 Apr 14 10:14 pilotlog.txt
2025-04-14 04:14:32 (11892): Guest Log: -rw-------. 1 atlas atlas   1562677 Apr 14 10:14 log.44075483._006081.job.log.1
2025-04-14 04:14:32 (11892): Guest Log: -rw-------. 1 atlas atlas       357 Apr 14 10:14 output.list
2025-04-14 04:14:32 (11892): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 14 10:14 runtime_log
2025-04-14 04:14:32 (11892): Guest Log: -rw-------. 1 atlas atlas   1986560 Apr 14 10:14 result.tar.gz
2025-04-14 04:14:32 (11892): Guest Log: -rw-------. 1 atlas atlas       666 Apr 14 10:14 whfLDmdIEO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmODULDmz2ptHm.diag
2025-04-14 04:14:32 (11892): Guest Log: -rw-r--r--. 1 atlas atlas     10963 Apr 14 10:14 runtime_log.err
2025-04-14 04:14:32 (11892): Guest Log: Looking for outputfile HITS.44075483._006081.pool.root.1
2025-04-14 04:14:32 (11892): Guest Log: HITS file was successfully produced
2025-04-14 04:14:32 (11892): Guest Log: -rw-------. 1 atlas atlas 198302841 Apr 14 10:13 /home/atlas/RunAtlas/HITS.44075483._006081.pool.root.1
2025-04-14 04:14:34 (11892): Guest Log: Successfully finished the ATLAS job!
2025-04-14 04:14:34 (11892): Guest Log: Copying the results back to the shared directory!
2025-04-14 04:14:34 (11892): Guest Log:  *** Contents of shared directory: ***
2025-04-14 04:14:34 (11892): Guest Log: total 415984
2025-04-14 04:14:34 (11892): Guest Log: -rwxrwxrwx. 1 root root 225129309 Apr 14 04:40 ATLAS.root_0
2025-04-14 04:14:34 (11892): Guest Log: -rwxrwxrwx. 1 root root 198302841 Apr 14 10:14 HITS.pool.root.1
2025-04-14 04:14:34 (11892): Guest Log: -rwxrwxrwx. 1 root root     11405 Apr 14 04:40 init_data.xml
2025-04-14 04:14:34 (11892): Guest Log: -rwxrwxrwx. 1 root root    508891 Apr 14 03:34 input.tar.gz
2025-04-14 04:14:34 (11892): Guest Log: -rwxrwxrwx. 1 root root   1986560 Apr 14 10:14 result.tar.gz
2025-04-14 04:14:34 (11892): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 14 03:34 start_atlas.sh
2025-04-14 04:14:34 (11892): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-14 04:14:34 (11892): VM Completion File Detected.
2025-04-14 04:14:34 (11892): Powering off VM.
2025-04-14 04:14:35 (11892): Successfully stopped VM.
2025-04-14 04:14:35 (11892): Deregistering VM. (boinc_aed69c5b9b802788, slot#2)
2025-04-14 04:14:35 (11892): Removing network bandwidth throttle group from VM.
2025-04-14 04:14:36 (11892): Removing VM from VirtualBox.
04:14:41 (11892): called boinc_finish(0)

</stderr_txt>
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