Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:46:46 (7937): wrapper (7.7.26015): starting
21:46:46 (7937): wrapper: running run_atlas (--nthreads 12)
[2025-04-13 21:46:46] Arguments: --nthreads 12
[2025-04-13 21:46:46] Threads: 12
[2025-04-13 21:46:46] Checking for CVMFS
[2025-04-13 21:46:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-13 21:46:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-13 21:46:47] Running cvmfs_config stat atlas.cern.ch
[2025-04-13 21:46:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-13 21:46:47] 2.11.2.0 2980 286826 198772 144831 0 56 19981170 20275200 1 130560 0 17880715 99.990 5457352 52278 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-13 21:46:47] CVMFS is ok
[2025-04-13 21:46:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-13 21:46:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-13 21:46:47] Further information can be found at the LHC@home message board.
[2025-04-13 21:46:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-13 21:46:47] Checking for apptainer binary...
[2025-04-13 21:46:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-13 21:46:47] Running /usr/bin/apptainer --version
[2025-04-13 21:46:47] apptainer version 1.3.2-1.el7
[2025-04-13 21:46:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-13 21:46:48] c-205-10.aglt2.org
[2025-04-13 21:46:48] apptainer works
[2025-04-13 21:46:48] Set ATHENA_PROC_NUMBER=12
[2025-04-13 21:46:48] Set ATHENA_CORE_NUMBER=12
[2025-04-13 21:46:48] Starting ATLAS job with PandaID=6602097717
[2025-04-13 21:46:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-13 23:09:23]  *** The last 200 lines of the pilot log: ***
[2025-04-13 23:09:23]  guid=93c7236d-5d84-4658-aa5c-1c2ac4260360
[2025-04-13 23:09:23]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-13 23:09:23]  is_altstaged=None
[2025-04-13 23:09:23]  is_tar=False
[2025-04-13 23:09:23]  lfn=log.44075483._007328.job.log.tgz.1
[2025-04-13 23:09:23]  mtime=0
[2025-04-13 23:09:23]  protocol_id=None
[2025-04-13 23:09:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-13 23:09:23]  replicas=None
[2025-04-13 23:09:23]  scope=mc23_13p6TeV
[2025-04-13 23:09:23]  status=None
[2025-04-13 23:09:23]  status_code=0
[2025-04-13 23:09:23]  storage_token=
[2025-04-13 23:09:23]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6602097717/log.44075483._007328.job.log.tgz.1
[2025-04-13 23:09:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/80/2b/log.44075483._007328.job.log.tgz.1
[2025-04-13 23:09:23]  workdir=None
[2025-04-13 23:09:23] ]
[2025-04-13 23:09:23] 2025-04-14 03:09:02,243 | INFO     | transferring file log.44075483._007328.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6602097717/log.44075483._007328.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-13 23:09:23] 2025-04-14 03:09:02,243 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6602097717/log.44075483._007328.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._007328.job
[2025-04-13 23:09:23] 2025-04-14 03:09:02,265 | INFO     | adding to output.list: log.44075483._007328.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/80/2b/log.44075483._007328.job.log.tg
[2025-04-13 23:09:23] 2025-04-14 03:09:02,266 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-13 23:09:23] 2025-04-14 03:09:02,266 | INFO     | summary of transferred files:
[2025-04-13 23:09:23] 2025-04-14 03:09:02,266 | INFO     |  -- lfn=log.44075483._007328.job.log.tgz.1, status_code=0, status=transferred
[2025-04-13 23:09:23] 2025-04-14 03:09:02,267 | INFO     | stage-out finished correctly
[2025-04-13 23:09:23] 2025-04-14 03:09:02,352 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-13 23:09:23] 2025-04-14 03:09:02,865 | INFO     | monitor loop #368: job 0:6602097717 is in state 'finished'
[2025-04-13 23:09:23] 2025-04-14 03:09:02,865 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-13 23:09:23] 2025-04-14 03:09:03,137 | INFO     | PID=11534 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-13 23:09:23] 2025-04-14 03:09:03,802 | INFO     | job 6602097717 has state=finished
[2025-04-13 23:09:23] 2025-04-14 03:09:03,802 | INFO     | preparing for final server update for job 6602097717 in state='finished'
[2025-04-13 23:09:23] 2025-04-14 03:09:03,803 | INFO     | this job has now completed (state=finished)
[2025-04-13 23:09:23] 2025-04-14 03:09:03,803 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-13 23:09:23] 2025-04-14 03:09:03,803 | INFO     | log transfer has been attempted: DONE
[2025-04-13 23:09:23] 2025-04-14 03:09:03,803 | INFO     | job 6602097717 has finished - writing final server update
[2025-04-13 23:09:23] 2025-04-14 03:09:03,804 | INFO     | total number of processed events: 400 (read)
[2025-04-13 23:09:23] 2025-04-14 03:09:03,805 | INFO     | executing command: lscpu
[2025-04-13 23:09:23] 2025-04-14 03:09:03,831 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-13 23:09:23] 2025-04-14 03:09:05,368 | INFO     | monitor loop #369: job 0:6602097717 is in state 'finished'
[2025-04-13 23:09:23] 2025-04-14 03:09:05,368 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-13 23:09:23] 2025-04-14 03:09:07,882 | INFO     | monitor loop #370: job 0:6602097717 is in state 'finished'
[2025-04-13 23:09:23] 2025-04-14 03:09:07,882 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-13 23:09:23] 2025-04-14 03:09:08,545 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-13 23:09:23] 2025-04-14 03:09:08,545 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6602097717/memory_monitor_summary.json (trf name=prmon)
[2025-04-13 23:09:23] 2025-04-14 03:09:08,546 | INFO     | extracted standard info from prmon json
[2025-04-13 23:09:23] 2025-04-14 03:09:08,547 | INFO     | extracted standard memory fields from prmon json
[2025-04-13 23:09:23] 2025-04-14 03:09:08,547 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-13 23:09:23] 2025-04-14 03:09:08,547 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-13 23:09:23] 2025-04-14 03:09:08,547 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-13 23:09:23] 2025-04-14 03:09:08,550 | INFO     | fitting pss+swap vs Time
[2025-04-13 23:09:23] 2025-04-14 03:09:08,550 | INFO     | sum of square deviations: 125630262.5
[2025-04-13 23:09:23] 2025-04-14 03:09:08,551 | INFO     | sum of deviations: 23433783729.0
[2025-04-13 23:09:23] 2025-04-14 03:09:08,551 | INFO     | mean x: 1744597781.5
[2025-04-13 23:09:23] 2025-04-14 03:09:08,552 | INFO     | mean y: 2536038.0
[2025-04-13 23:09:23] 2025-04-14 03:09:08,552 | INFO     | -- intersect: -325416883552.5958
[2025-04-13 23:09:23] 2025-04-14 03:09:08,552 | INFO     | intersect: -325416883552.5958
[2025-04-13 23:09:23] 2025-04-14 03:09:08,552 | INFO     | chi2: 1.6942090830853676
[2025-04-13 23:09:23] 2025-04-14 03:09:08,552 | INFO     | -- intersect: -325416883552.5958
[2025-04-13 23:09:23] 2025-04-14 03:09:08,553 | INFO     | current memory leak: 186.53 B/s (using 74 data points, chi2=1.69)
[2025-04-13 23:09:23] 2025-04-14 03:09:08,553 | INFO     | ..............................
[2025-04-13 23:09:23] 2025-04-14 03:09:08,553 | INFO     | . Timing measurements:
[2025-04-13 23:09:23] 2025-04-14 03:09:08,553 | INFO     | . get job = 0 s
[2025-04-13 23:09:23] 2025-04-14 03:09:08,554 | INFO     | . initial setup = 2 s
[2025-04-13 23:09:23] 2025-04-14 03:09:08,554 | INFO     | . payload setup = 7 s
[2025-04-13 23:09:23] 2025-04-14 03:09:08,554 | INFO     | . stage-in = 0 s
[2025-04-13 23:09:23] 2025-04-14 03:09:08,554 | INFO     | . payload execution = 4893 s
[2025-04-13 23:09:23] 2025-04-14 03:09:08,554 | INFO     | . stage-out = 0 s
[2025-04-13 23:09:23] 2025-04-14 03:09:08,554 | INFO     | . log creation = 0 s
[2025-04-13 23:09:23] 2025-04-14 03:09:08,555 | INFO     | ..............................
[2025-04-13 23:09:23] 2025-04-14 03:09:09,108 | INFO     | 
[2025-04-13 23:09:23] 2025-04-14 03:09:09,108 | INFO     | job summary report
[2025-04-13 23:09:23] 2025-04-14 03:09:09,108 | INFO     | --------------------------------------------------
[2025-04-13 23:09:23] 2025-04-14 03:09:09,108 | INFO     | PanDA job id: 6602097717
[2025-04-13 23:09:23] 2025-04-14 03:09:09,108 | INFO     | task id: 44075483
[2025-04-13 23:09:23] 2025-04-14 03:09:09,108 | INFO     | errors: (none)
[2025-04-13 23:09:23] 2025-04-14 03:09:09,109 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-13 23:09:23] 2025-04-14 03:09:09,109 | INFO     | pilot state: finished 
[2025-04-13 23:09:23] 2025-04-14 03:09:09,109 | INFO     | transexitcode: 0
[2025-04-13 23:09:23] 2025-04-14 03:09:09,109 | INFO     | exeerrorcode: 0
[2025-04-13 23:09:23] 2025-04-14 03:09:09,109 | INFO     | exeerrordiag: 
[2025-04-13 23:09:23] 2025-04-14 03:09:09,109 | INFO     | exitcode: 0
[2025-04-13 23:09:23] 2025-04-14 03:09:09,110 | INFO     | exitmsg: OK
[2025-04-13 23:09:23] 2025-04-14 03:09:09,110 | INFO     | cpuconsumptiontime: 45416 s
[2025-04-13 23:09:23] 2025-04-14 03:09:09,110 | INFO     | nevents: 400
[2025-04-13 23:09:23] 2025-04-14 03:09:09,110 | INFO     | neventsw: 0
[2025-04-13 23:09:23] 2025-04-14 03:09:09,110 | INFO     | pid: 17974
[2025-04-13 23:09:23] 2025-04-14 03:09:09,110 | INFO     | pgrp: 17974
[2025-04-13 23:09:23] 2025-04-14 03:09:09,111 | INFO     | corecount: 12
[2025-04-13 23:09:23] 2025-04-14 03:09:09,111 | INFO     | event service: False
[2025-04-13 23:09:23] 2025-04-14 03:09:09,111 | INFO     | sizes: {0: 2417359, 1: 2417359, 5: 2417593, 11: 2417649, 4904: 2443767, 4905: 2452708, 4906: 2452892, 4912: 2453062}
[2025-04-13 23:09:23] 2025-04-14 03:09:09,111 | INFO     | --------------------------------------------------
[2025-04-13 23:09:23] 2025-04-14 03:09:09,111 | INFO     | 
[2025-04-13 23:09:23] 2025-04-14 03:09:09,111 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-13 23:09:23] 2025-04-14 03:09:09,135 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-13 23:09:23] 2025-04-14 03:09:09,136 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-13 23:09:23] 2025-04-14 03:09:09,136 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-13 23:09:23] 2025-04-14 03:09:09,136 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-13 23:09:23] 2025-04-14 03:09:09,136 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-13 23:09:23] 2025-04-14 03:09:09,137 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-13 23:09:23] 2025-04-14 03:09:09,137 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-13 23:09:23] 2025-04-14 03:09:09,137 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-13 23:09:23] 2025-04-14 03:09:09,137 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-13 23:09:23] 2025-04-14 03:09:09,137 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-13 23:09:23] 2025-04-14 03:09:09,137 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-13 23:09:23] 2025-04-14 03:09:09,138 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-13 23:09:23] 2025-04-14 03:09:09,138 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-13 23:09:23] 2025-04-14 03:09:09,138 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-13 23:09:23] 2025-04-14 03:09:09,138 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-13 23:09:23] 2025-04-14 03:09:09,138 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-13 23:09:23] 2025-04-14 03:09:09,138 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-13 23:09:23] 2025-04-14 03:09:09,139 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-13 23:09:23] 2025-04-14 03:09:09,139 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-13 23:09:23] 2025-04-14 03:09:09,139 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-13 23:09:23] 2025-04-14 03:09:09,139 | INFO     | job 6602097717 has completed (purged errors)
[2025-04-13 23:09:23] 2025-04-14 03:09:09,139 | INFO     | overall cleanup function is called
[2025-04-13 23:09:23] 2025-04-14 03:09:10,145 | INFO     | --- collectZombieJob: --- 10, [17974]
[2025-04-13 23:09:23] 2025-04-14 03:09:10,145 | INFO     | zombie collector waiting for pid 17974
[2025-04-13 23:09:23] 2025-04-14 03:09:10,145 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-13 23:09:23] 2025-04-14 03:09:10,145 | INFO     | collected zombie processes
[2025-04-13 23:09:23] 2025-04-14 03:09:10,145 | INFO     | will attempt to kill all subprocesses of pid=17974
[2025-04-13 23:09:23] 2025-04-14 03:09:10,238 | INFO     | process IDs to be killed: [17974] (in reverse order)
[2025-04-13 23:09:23] 2025-04-14 03:09:10,289 | WARNING  | found no corresponding commands to process id(s)
[2025-04-13 23:09:23] 2025-04-14 03:09:10,290 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-13 23:09:23] 2025-04-14 03:09:10,293 | INFO     | did not find any defunct processes belonging to 17974
[2025-04-13 23:09:23] 2025-04-14 03:09:10,296 | INFO     | did not find any defunct processes belonging to 17974
[2025-04-13 23:09:23] 2025-04-14 03:09:10,297 | INFO     | ready for new job
[2025-04-13 23:09:23] 2025-04-14 03:09:10,297 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-13 23:09:23] 2025-04-14 03:09:10,298 | INFO     | **************************************
[2025-04-13 23:09:23] 2025-04-14 03:09:10,298 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-13 23:09:23] 2025-04-14 03:09:10,298 | INFO     | **************************************
[2025-04-13 23:09:23] 2025-04-14 03:09:10,298 | INFO     | 
[2025-04-13 23:09:23] 2025-04-14 03:09:10,298 | INFO     | architecture information:
[2025-04-13 23:09:23] 2025-04-14 03:09:10,299 | INFO     | executing command: cat /etc/os-release
[2025-04-13 23:09:23] 2025-04-14 03:09:10,313 | INFO     | cat /etc/os-release:
[2025-04-13 23:09:23] NAME="CentOS Linux"
[2025-04-13 23:09:23] VERSION="7 (Core)"
[2025-04-13 23:09:23] ID="centos"
[2025-04-13 23:09:23] ID_LIKE="rhel fedora"
[2025-04-13 23:09:23] VERSION_ID="7"
[2025-04-13 23:09:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-13 23:09:23] ANSI_COLOR="0;31"
[2025-04-13 23:09:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-13 23:09:23] HOME_URL="https://www.centos.org/"
[2025-04-13 23:09:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-13 23:09:23] 
[2025-04-13 23:09:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-13 23:09:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-13 23:09:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-13 23:09:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-13 23:09:23] 
[2025-04-13 23:09:23] 2025-04-14 03:09:10,313 | INFO     | **************************************
[2025-04-13 23:09:23] 2025-04-14 03:09:10,814 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-13 23:09:23] 2025-04-14 03:09:10,831 | INFO     | sufficient remaining disk space (29401022464 B)
[2025-04-13 23:09:23] 2025-04-14 03:09:10,831 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-13 23:09:23] 2025-04-14 03:09:10,831 | INFO     | current server update state: UPDATING_FINAL
[2025-04-13 23:09:23] 2025-04-14 03:09:10,831 | INFO     | update_server=False
[2025-04-13 23:09:23] 2025-04-14 03:09:10,832 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-13 23:09:23] 2025-04-14 03:09:10,832 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-13 23:09:23] 2025-04-14 03:09:11,025 | INFO     | all data control threads have been joined
[2025-04-13 23:09:23] 2025-04-14 03:09:11,158 | INFO     | found 0 job(s) in 20 queues
[2025-04-13 23:09:23] 2025-04-14 03:09:11,158 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-13 23:09:23] 2025-04-14 03:09:11,158 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-13 23:09:23] 2025-04-14 03:09:11,390 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-13 23:09:23] 2025-04-14 03:09:11,391 | INFO     | aborting loop
[2025-04-13 23:09:23] 2025-04-14 03:09:11,837 | INFO     | [job] retrieve thread has finished
[2025-04-13 23:09:23] 2025-04-14 03:09:11,913 | INFO     | [payload] validate_pre thread has finished
[2025-04-13 23:09:23] 2025-04-14 03:09:11,936 | INFO     | [job] validate thread has finished
[2025-04-13 23:09:23] 2025-04-14 03:09:11,953 | INFO     | [job] create_data_payload thread has finished
[2025-04-13 23:09:23] 2025-04-14 03:09:11,987 | INFO     | all payload control threads have been joined
[2025-04-13 23:09:23] 2025-04-14 03:09:12,031 | INFO     | [data] control thread has finished
[2025-04-13 23:09:23] 2025-04-14 03:09:12,183 | INFO     | all job control threads have been joined
[2025-04-13 23:09:23] 2025-04-14 03:09:12,396 | INFO     | [job] job monitor thread has finished
[2025-04-13 23:09:23] 2025-04-14 03:09:12,439 | INFO     | [payload] execute_payloads thread has finished
[2025-04-13 23:09:23] 2025-04-14 03:09:12,561 | INFO     | [data] copytool_in thread has finished
[2025-04-13 23:09:23] 2025-04-14 03:09:12,648 | INFO     | [payload] failed_post thread has finished
[2025-04-13 23:09:23] 2025-04-14 03:09:12,837 | INFO     | [data] copytool_out thread has finished
[2025-04-13 23:09:23] 2025-04-14 03:09:12,941 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-13 23:09:23] 2025-04-14 03:09:12,992 | INFO     | [payload] control thread has finished
[2025-04-13 23:09:23] 2025-04-14 03:09:13,188 | INFO     | [job] control thread has finished
[2025-04-13 23:09:23] 2025-04-14 03:09:13,234 | INFO     | [payload] validate_post thread has finished
[2025-04-13 23:09:23] 2025-04-14 03:09:13,251 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-13 23:09:23] 2025-04-14 03:09:13,650 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-13 23:09:23] 2025-04-14 03:09:14,656 | INFO     | [job] queue monitor thread has finished
[2025-04-13 23:09:23] 2025-04-14 03:09:16,947 | INFO     | [data] queue_monitor thread has finished
[2025-04-13 23:09:23] 2025-04-14 03:09:18,453 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140357168453440)>', '<ExcThread(monitor, started 140356427437824)>']
[2025-04-13 23:09:23] 2025-04-14 03:09:19,199 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-13 23:09:23] 2025-04-14 03:09:19,199 | INFO     | [monitor] control thread has ended
[2025-04-13 23:09:23] 2025-04-14 03:09:23,476 | INFO     | all workflow threads have been joined
[2025-04-13 23:09:23] 2025-04-14 03:09:23,476 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-13 23:09:23] 2025-04-14 03:09:23,476 | INFO     | traces error code: 0
[2025-04-13 23:09:23] 2025-04-14 03:09:23,476 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-13 23:09:23] 2025-04-14 03:09:23,566 [wrapper] ==== pilot stdout END ====
[2025-04-13 23:09:23] 2025-04-14 03:09:23,569 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-13 23:09:23] 2025-04-14 03:09:23,573 [wrapper] pilotpid: 11534
[2025-04-13 23:09:23] 2025-04-14 03:09:23,576 [wrapper] Pilot exit status: 0
[2025-04-13 23:09:23] 2025-04-14 03:09:23,593 [wrapper] pandaids: 6602097717
[2025-04-13 23:09:23] 2025-04-14 03:09:23,630 [wrapper] cleanup supervisor_pilot 32116 11535
[2025-04-13 23:09:23] 2025-04-14 03:09:23,634 [wrapper] Test setup, not cleaning
[2025-04-13 23:09:23] 2025-04-14 03:09:23,638 [wrapper] apfmon messages muted
[2025-04-13 23:09:23] 2025-04-14 03:09:23,642 [wrapper] ==== wrapper stdout END ====
[2025-04-13 23:09:23] 2025-04-14 03:09:23,646 [wrapper] ==== wrapper stderr END ====
[2025-04-13 23:09:23]  *** Error codes and diagnostics ***
[2025-04-13 23:09:23]     "exeErrorCode": 0,
[2025-04-13 23:09:23]     "exeErrorDiag": "",
[2025-04-13 23:09:23]     "pilotErrorCode": 0,
[2025-04-13 23:09:23]     "pilotErrorDiag": "",
[2025-04-13 23:09:23]  *** Listing of results directory ***
[2025-04-13 23:09:23] total 412112
[2025-04-13 23:09:23] -rw-r--r-- 1 boincer umatlas    495897 Apr 13 13:12 pilot3.tar.gz
[2025-04-13 23:09:23] -rw-r--r-- 1 boincer umatlas      5111 Apr 13 13:26 queuedata.json
[2025-04-13 23:09:23] -rwx------ 1 boincer umatlas     37140 Apr 13 13:28 runpilot2-wrapper.sh
[2025-04-13 23:09:23] -rw-r--r-- 1 boincer umatlas       100 Apr 13 21:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-13 23:09:23] -rwxr-xr-x 1 boincer umatlas      7986 Apr 13 21:46 run_atlas
[2025-04-13 23:09:23] -rw-r--r-- 1 boincer umatlas       105 Apr 13 21:46 job.xml
[2025-04-13 23:09:23] -rw-r--r-- 2 boincer umatlas 222125269 Apr 13 21:46 EVNT.44075481._000285.pool.root.1
[2025-04-13 23:09:23] -rw-r--r-- 2 boincer umatlas     17569 Apr 13 21:46 start_atlas.sh
[2025-04-13 23:09:23] drwxrwx--x 2 boincer umatlas      4096 Apr 13 21:46 shared
[2025-04-13 23:09:23] -rw-r--r-- 2 boincer umatlas    508895 Apr 13 21:46 input.tar.gz
[2025-04-13 23:09:23] -rw-r--r-- 1 boincer umatlas         0 Apr 13 21:46 boinc_lockfile
[2025-04-13 23:09:23] -rw-r--r-- 1 boincer umatlas      2575 Apr 13 21:46 pandaJob.out
[2025-04-13 23:09:23] -rw------- 1 boincer umatlas       424 Apr 13 21:46 setup.sh.local
[2025-04-13 23:09:23] -rw------- 1 boincer umatlas    985912 Apr 13 21:46 agis_schedconf.cvmfs.json
[2025-04-13 23:09:23] -rw------- 1 boincer umatlas   1603529 Apr 13 21:46 agis_ddmendpoints.agis.ALL.json
[2025-04-13 23:09:23] drwx------ 4 boincer umatlas      4096 Apr 13 21:47 pilot3
[2025-04-13 23:09:23] -rw-r--r-- 1 boincer umatlas      5868 Apr 13 23:04 init_data.xml
[2025-04-13 23:09:23] -rw------- 1 boincer umatlas 194359428 Apr 13 23:08 HITS.44075483._007328.pool.root.1
[2025-04-13 23:09:23] -rw-r--r-- 1 boincer umatlas       529 Apr 13 23:08 boinc_task_state.xml
[2025-04-13 23:09:23] -rw------- 1 boincer umatlas      1044 Apr 13 23:08 memory_monitor_summary.json
[2025-04-13 23:09:23] -rw------- 1 boincer umatlas        95 Apr 13 23:09 pilot_heartbeat.json
[2025-04-13 23:09:23] -rw------- 1 boincer umatlas    370141 Apr 13 23:09 log.44075483._007328.job.log.tgz.1
[2025-04-13 23:09:23] -rw------- 1 boincer umatlas      7745 Apr 13 23:09 heartbeat.json
[2025-04-13 23:09:23] -rw-r--r-- 1 boincer umatlas      8192 Apr 13 23:09 boinc_mmap_file
[2025-04-13 23:09:23] -rw-r--r-- 1 boincer umatlas        27 Apr 13 23:09 wrapper_checkpoint.txt
[2025-04-13 23:09:23] -rw------- 1 boincer umatlas      4353 Apr 13 23:09 pilotlog.txt
[2025-04-13 23:09:23] -rw------- 1 boincer umatlas    469174 Apr 13 23:09 log.44075483._007328.job.log.1
[2025-04-13 23:09:23] -rw------- 1 boincer umatlas       357 Apr 13 23:09 output.list
[2025-04-13 23:09:23] -rw-r--r-- 1 boincer umatlas       620 Apr 13 23:09 runtime_log
[2025-04-13 23:09:23] -rw------- 1 boincer umatlas    860160 Apr 13 23:09 result.tar.gz
[2025-04-13 23:09:23] -rw------- 1 boincer umatlas       658 Apr 13 23:09 YzbKDm6IGO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmrTULDmcScFOm.diag
[2025-04-13 23:09:23] -rw-r--r-- 1 boincer umatlas     11015 Apr 13 23:09 runtime_log.err
[2025-04-13 23:09:23] -rw-r--r-- 1 boincer umatlas     21383 Apr 13 23:09 stderr.txt
[2025-04-13 23:09:23] HITS file was successfully produced:
[2025-04-13 23:09:23] -rw------- 1 boincer umatlas 194359428 Apr 13 23:08 shared/HITS.pool.root.1
[2025-04-13 23:09:23]  *** Contents of shared directory: ***
[2025-04-13 23:09:23] total 408088
[2025-04-13 23:09:23] -rw-r--r-- 2 boincer umatlas 222125269 Apr 13 21:46 ATLAS.root_0
[2025-04-13 23:09:23] -rw-r--r-- 2 boincer umatlas     17569 Apr 13 21:46 start_atlas.sh
[2025-04-13 23:09:23] -rw-r--r-- 2 boincer umatlas    508895 Apr 13 21:46 input.tar.gz
[2025-04-13 23:09:23] -rw------- 1 boincer umatlas 194359428 Apr 13 23:08 HITS.pool.root.1
[2025-04-13 23:09:23] -rw------- 1 boincer umatlas    860160 Apr 13 23:09 result.tar.gz
23:09:25 (7937): run_atlas exited; CPU time 45408.795969
23:09:25 (7937): called boinc_finish(0)

</stderr_txt>
]]>

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