Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-14 00:24:03 (15544): Detected: vboxwrapper 26206
2025-04-14 00:24:03 (15544): Detected: BOINC client v7.16.11
2025-04-14 00:24:03 (15544): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2025-04-14 00:24:03 (15544): Successfully copied 'init_data.xml' to the shared directory.
2025-04-14 00:24:04 (15544): Create VM. (boinc_3fa60c49947c0914, slot#3)
2025-04-14 00:24:04 (15544): Setting Memory Size for VM. (4700MB)
2025-04-14 00:24:05 (15544): Setting CPU Count for VM. (7)
2025-04-14 00:24:05 (15544): Setting Chipset Options for VM.
2025-04-14 00:24:05 (15544): Setting Graphics Controller Options for VM.
2025-04-14 00:24:05 (15544): Setting Boot Options for VM.
2025-04-14 00:24:06 (15544): Setting Network Configuration for NAT.
2025-04-14 00:24:06 (15544): Enabling VM Network Access.
2025-04-14 00:24:06 (15544): Disabling USB Support for VM.
2025-04-14 00:24:06 (15544): Disabling COM Port Support for VM.
2025-04-14 00:24:07 (15544): Disabling LPT Port Support for VM.
2025-04-14 00:24:07 (15544): Disabling Audio Support for VM.
2025-04-14 00:24:07 (15544): Disabling Clipboard Support for VM.
2025-04-14 00:24:07 (15544): Disabling Drag and Drop Support for VM.
2025-04-14 00:24:08 (15544): Adding storage controller(s) to VM.
2025-04-14 00:24:08 (15544): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-14 00:24:08 (15544): Adding VirtualBox Guest Additions to VM.
2025-04-14 00:24:09 (15544): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-14 00:24:09 (15544): forwarding host port 63366 to guest port 80
2025-04-14 00:24:09 (15544): Enabling remote desktop for VM.
2025-04-14 00:24:09 (15544): Required extension pack not installed, remote desktop not enabled.
2025-04-14 00:24:09 (15544): Enabling shared directory for VM.
2025-04-14 00:24:10 (15544): Starting VM using VBoxManage interface. (boinc_3fa60c49947c0914, slot#3)
2025-04-14 00:24:14 (15544): Successfully started VM. (PID = '30436')
2025-04-14 00:24:14 (15544): Reporting VM Process ID to BOINC.
2025-04-14 00:24:14 (15544): Guest Log: BIOS: VirtualBox 6.1.12
2025-04-14 00:24:14 (15544): Guest Log: CPUID EDX: 0x178bfbff
2025-04-14 00:24:14 (15544): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-14 00:24:14 (15544): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-14 00:24:14 (15544): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-14 00:24:14 (15544): Detected: Web Application Enabled (http://localhost:63366)
2025-04-14 00:24:14 (15544): Preference change detected
2025-04-14 00:24:14 (15544): Setting CPU throttle for VM. (40%)
2025-04-14 00:24:14 (15544): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-14 00:24:16 (15544): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-14 00:24:16 (15544): Guest Log: BIOS: Booting from Hard Disk...
2025-04-14 00:24:22 (15544): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-14 00:24:22 (15544): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-14 00:24:22 (15544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-14 00:24:34 (15544): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-14 00:24:34 (15544): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-14 00:24:44 (15544): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-14 00:24:44 (15544): Guest Log: 00:00:00.000139 main     Log opened 2025-04-14T00:24:42.209107000Z
2025-04-14 00:24:44 (15544): Guest Log: 00:00:00.000251 main     OS Product: Linux
2025-04-14 00:24:44 (15544): Guest Log: 00:00:00.000288 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-14 00:24:44 (15544): Guest Log: 00:00:00.000314 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-14 00:24:44 (15544): Guest Log: 00:00:00.000338 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-14 00:24:44 (15544): Guest Log: 00:00:00.000339 main     Process ID: 1354
2025-04-14 00:24:44 (15544): Guest Log: 00:00:00.000339 main     Package type: LINUX_64BITS_GENERIC
2025-04-14 00:24:44 (15544): Guest Log: 00:00:00.002265 main     5.2.32 r132073 started. Verbose level = 0
2025-04-14 00:24:44 (15544): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-14 00:24:44 (15544): Guest Log: [INFO] Mounting shared directory
2025-04-14 00:24:44 (15544): Guest Log: [INFO] Checking for init_data.xml
2025-04-14 00:24:48 (15544): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-14 00:24:48 (15544): Guest Log: [INFO] Detected branch: prod
2025-04-14 00:24:48 (15544): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-14 00:24:48 (15544): Guest Log: Copying input files
2025-04-14 00:24:54 (15544): Guest Log: 00:00:10.052014 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 720 138 000ns (GuestNow=1 744 586 693 538 642 000 ns GuestLast=1 744 590 282 258 780 000 ns fSetTimeLastLoop=true )
2025-04-14 00:24:54 (15544): Guest Log: Copied input files into RunAtlas.
2025-04-14 00:24:54 (15544): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-14 00:24:54 (15544): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-14 00:24:54 (15544): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-14 00:24:54 (15544): Guest Log: Further information can be found at the LHC@home message board.
2025-04-14 00:25:05 (15544): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-14 00:25:05 (15544): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-14 00:25:05 (15544): Guest Log: 2.6.3.0 1630 0 32164 144829 3 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-14 00:25:06 (15544): Guest Log: copied the webapp to /var/www
2025-04-14 00:25:07 (15544): Guest Log: ATHENA_PROC_NUMBER=7
2025-04-14 00:25:07 (15544): Guest Log: ATHENA_CORE_NUMBER=7
2025-04-14 00:25:07 (15544): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-14 00:25:07 (15544): Guest Log:  *** Starting ATLAS job. (PandaID=6600398972 taskID=44075164) ***
2025-04-14 00:31:25 (15544): Guest Log:  *** Job finished ***
2025-04-14 00:31:25 (15544): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-14 00:31:25 (15544): Guest Log: 2025-04-13 23:31:17,018 | INFO     | [payload] execute_payloads thread has finished
2025-04-14 00:31:25 (15544): Guest Log: 2025-04-13 23:31:17,337 | INFO     | [data] copytool_out thread has finished
2025-04-14 00:31:25 (15544): Guest Log: 2025-04-13 23:31:18,538 | INFO     | [data] queue_monitor thread has finished
2025-04-14 00:31:25 (15544): Guest Log: 2025-04-13 23:31:19,142 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139748459222848)>', '<ExcThread(monitor, started 139747993298688)>']
2025-04-14 00:31:25 (15544): Guest Log: 2025-04-13 23:31:19,340 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-14 00:31:25 (15544): Guest Log: 2025-04-13 23:31:19,340 | INFO     | [monitor] control thread has ended
2025-04-14 00:31:25 (15544): Guest Log: 2025-04-13 23:31:24,147 | INFO     | all workflow threads have been joined
2025-04-14 00:31:25 (15544): Guest Log: 2025-04-13 23:31:24,148 | INFO     | end of generic workflow (traces error code: 0)
2025-04-14 00:31:25 (15544): Guest Log: 2025-04-13 23:31:24,148 | INFO     | traces error code: 0
2025-04-14 00:31:25 (15544): Guest Log: 2025-04-13 23:31:24,148 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-14 00:31:25 (15544): Guest Log: 2025-04-13 23:31:24,270 [wrapper] ==== pilot stdout END ====
2025-04-14 00:31:25 (15544): Guest Log: 2025-04-13 23:31:24,275 [wrapper] ==== wrapper stdout RESUME ====
2025-04-14 00:31:25 (15544): Guest Log: 2025-04-13 23:31:24,279 [wrapper] pilotpid: 5983
2025-04-14 00:31:25 (15544): Guest Log: 2025-04-13 23:31:24,284 [wrapper] Pilot exit status: 0
2025-04-14 00:31:25 (15544): Guest Log: 2025-04-13 23:31:24,438 [wrapper] pandaids: 6600398972
2025-04-14 00:31:25 (15544): Guest Log: 2025-04-13 23:31:24,470 [wrapper] cleanup supervisor_pilot  5989 5984
2025-04-14 00:31:25 (15544): Guest Log: 2025-04-13 23:31:25,009 [wrapper] Test setup, not cleaning
2025-04-14 00:31:25 (15544): Guest Log: 2025-04-13 23:31:25,018 [wrapper] apfmon messages muted
2025-04-14 00:31:25 (15544): Guest Log: 2025-04-13 23:31:25,023 [wrapper] ==== wrapper stdout END ====
2025-04-14 00:31:25 (15544): Guest Log: 2025-04-13 23:31:25,028 [wrapper] ==== wrapper stderr END ====
2025-04-14 00:31:25 (15544): Guest Log:  *** Error codes and diagnostics ***
2025-04-14 00:31:25 (15544): Guest Log:     "exeErrorCode": 65,
2025-04-14 00:31:25 (15544): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-04-14 00:31:25 (15544): Guest Log:     "pilotErrorCode": 1305,
2025-04-14 00:31:25 (15544): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-04-14 00:31:25 (15544): Guest Log:  *** Listing of results directory ***
2025-04-14 00:31:25 (15544): Guest Log: total 3892
2025-04-14 00:31:25 (15544): Guest Log: -rw-r--r--. 1 atlas atlas  495897 Apr 12 07:17 pilot3.tar.gz
2025-04-14 00:31:25 (15544): Guest Log: -rwx------. 1 atlas atlas   37140 Apr 12 07:38 runpilot2-wrapper.sh
2025-04-14 00:31:25 (15544): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Apr 12 07:38 queuedata.json
2025-04-14 00:31:25 (15544): Guest Log: -rwxr-xr-x. 1 atlas atlas   12649 Apr 13 23:24 init_data.xml
2025-04-14 00:31:25 (15544): Guest Log: -rwxr-xr-x. 1 atlas atlas  508880 Apr 13 23:24 input.tar.gz
2025-04-14 00:31:25 (15544): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Apr 13 23:24 start_atlas.sh
2025-04-14 00:31:25 (15544): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr 13 23:24 EVNT.44075162._001605.pool.root.1 -> /data/./ATLAS.root_0
2025-04-14 00:31:25 (15544): Guest Log: -rw-r--r--. 1 atlas atlas    2549 Apr 13 23:25 pandaJob.out
2025-04-14 00:31:25 (15544): Guest Log: -rw-------. 1 atlas atlas     424 Apr 13 23:25 setup.sh.local
2025-04-14 00:31:25 (15544): Guest Log: -rw-------. 1 atlas atlas  985904 Apr 13 23:26 agis_schedconf.cvmfs.json
2025-04-14 00:31:25 (15544): Guest Log: -rw-------. 1 atlas atlas 1603529 Apr 13 23:26 agis_ddmendpoints.agis.ALL.json
2025-04-14 00:31:25 (15544): Guest Log: drwx------. 4 atlas atlas    4096 Apr 13 23:26 pilot3
2025-04-14 00:31:25 (15544): Guest Log: -rw-------. 1 atlas atlas    1008 Apr 13 23:28 memory_monitor_summary.json
2025-04-14 00:31:25 (15544): Guest Log: -rw-------. 1 atlas atlas   20794 Apr 13 23:29 log.44075164._041415.job.log.tgz.1
2025-04-14 00:31:25 (15544): Guest Log: -rw-------. 1 atlas atlas      95 Apr 13 23:30 pilot_heartbeat.json
2025-04-14 00:31:25 (15544): Guest Log: -rw-------. 1 atlas atlas    8369 Apr 13 23:31 heartbeat.json
2025-04-14 00:31:25 (15544): Guest Log: -rw-------. 1 atlas atlas    4599 Apr 13 23:31 pilotlog.txt
2025-04-14 00:31:25 (15544): Guest Log: -rw-------. 1 atlas atlas   81095 Apr 13 23:31 log.44075164._041415.job.log.1
2025-04-14 00:31:25 (15544): Guest Log: -rw-------. 1 atlas atlas     188 Apr 13 23:31 output.list
2025-04-14 00:31:25 (15544): Guest Log: -rw-r--r--. 1 atlas atlas     620 Apr 13 23:31 runtime_log
2025-04-14 00:31:25 (15544): Guest Log: -rw-------. 1 atlas atlas  122880 Apr 13 23:31 result.tar.gz
2025-04-14 00:31:25 (15544): Guest Log: -rw-r--r--. 1 atlas atlas   10773 Apr 13 23:31 runtime_log.err
2025-04-14 00:31:25 (15544): Guest Log: -rw-------. 1 atlas atlas     637 Apr 13 23:31 LbHKDm5ckN7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmS8xKDm0112Xn.diag
2025-04-14 00:31:25 (15544): Guest Log: Looking for outputfile HITS.44075164._041415.pool.root.1
2025-04-14 00:31:25 (15544): Guest Log: No HITS file was produced
2025-04-14 00:31:25 (15544): Guest Log: Successfully finished the ATLAS job!
2025-04-14 00:31:25 (15544): Guest Log: Copying the results back to the shared directory!
2025-04-14 00:31:26 (15544): Guest Log:  *** Contents of shared directory: ***
2025-04-14 00:31:26 (15544): Guest Log: total 217452
2025-04-14 00:31:26 (15544): Guest Log: -rwxrwxrwx. 1 root root 221996370 Apr 13 23:24 ATLAS.root_0
2025-04-14 00:31:26 (15544): Guest Log: -rwxrwxrwx. 1 root root     12649 Apr 13 23:24 init_data.xml
2025-04-14 00:31:26 (15544): Guest Log: -rwxrwxrwx. 1 root root    508880 Apr 13 22:06 input.tar.gz
2025-04-14 00:31:26 (15544): Guest Log: -rwxrwxrwx. 1 root root    122880 Apr 13 23:31 result.tar.gz
2025-04-14 00:31:26 (15544): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 13 22:06 start_atlas.sh
2025-04-14 00:31:26 (15544): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-14 00:31:26 (15544): VM Completion File Detected.
2025-04-14 00:31:26 (15544): Powering off VM.
2025-04-14 00:31:27 (15544): Successfully stopped VM.
2025-04-14 00:31:27 (15544): Deregistering VM. (boinc_3fa60c49947c0914, slot#3)
2025-04-14 00:31:27 (15544): Removing network bandwidth throttle group from VM.
2025-04-14 00:31:27 (15544): Removing VM from VirtualBox.
00:31:32 (15544): called boinc_finish(0)

</stderr_txt>
]]>

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