Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-16 21:10:34 (8524): Detected: vboxwrapper 26206
2025-04-16 21:10:34 (8524): Detected: BOINC client v8.0.2
2025-04-16 21:10:34 (8524): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-04-16 21:10:34 (8524): Successfully copied 'init_data.xml' to the shared directory.
2025-04-16 21:10:35 (8524): Create VM. (boinc_30b25dfb08384360, slot#2)
2025-04-16 21:10:36 (8524): Setting Memory Size for VM. (4800MB)
2025-04-16 21:10:36 (8524): Setting CPU Count for VM. (8)
2025-04-16 21:10:36 (8524): Setting Chipset Options for VM.
2025-04-16 21:10:36 (8524): Setting Graphics Controller Options for VM.
2025-04-16 21:10:37 (8524): Setting Boot Options for VM.
2025-04-16 21:10:37 (8524): Setting Network Configuration for NAT.
2025-04-16 21:10:37 (8524): Enabling VM Network Access.
2025-04-16 21:10:37 (8524): Disabling USB Support for VM.
2025-04-16 21:10:38 (8524): Disabling COM Port Support for VM.
2025-04-16 21:10:38 (8524): Disabling LPT Port Support for VM.
2025-04-16 21:10:38 (8524): Disabling Audio Support for VM.
2025-04-16 21:10:38 (8524): Disabling Clipboard Support for VM.
2025-04-16 21:10:39 (8524): Disabling Drag and Drop Support for VM.
2025-04-16 21:10:39 (8524): Adding storage controller(s) to VM.
2025-04-16 21:10:39 (8524): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-16 21:10:40 (8524): Adding VirtualBox Guest Additions to VM.
2025-04-16 21:10:40 (8524): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-16 21:10:40 (8524): forwarding host port 52122 to guest port 80
2025-04-16 21:10:40 (8524): Enabling remote desktop for VM.
2025-04-16 21:10:41 (8524): Required extension pack not installed, remote desktop not enabled.
2025-04-16 21:10:41 (8524): Enabling shared directory for VM.
2025-04-16 21:10:41 (8524): Starting VM using VBoxManage interface. (boinc_30b25dfb08384360, slot#2)
2025-04-16 21:10:47 (8524): Successfully started VM. (PID = '6948')
2025-04-16 21:10:47 (8524): Reporting VM Process ID to BOINC.
2025-04-16 21:10:47 (8524): Guest Log: BIOS: VirtualBox 7.0.6
2025-04-16 21:10:47 (8524): Guest Log: CPUID EDX: 0x178bfbff
2025-04-16 21:10:47 (8524): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-16 21:10:47 (8524): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-16 21:10:47 (8524): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-16 21:10:47 (8524): Detected: Web Application Enabled (http://localhost:52122)
2025-04-16 21:10:47 (8524): Preference change detected
2025-04-16 21:10:47 (8524): Setting CPU throttle for VM. (100%)
2025-04-16 21:10:47 (8524): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-16 21:10:49 (8524): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-16 21:10:49 (8524): Guest Log: BIOS: Booting from Hard Disk...
2025-04-16 21:10:52 (8524): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-16 21:10:52 (8524): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-16 21:10:52 (8524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-16 21:10:57 (8524): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-16 21:10:57 (8524): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-16 21:11:02 (8524): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-16 21:11:02 (8524): Guest Log: 00:00:00.000120 main     Log opened 2025-04-16T21:11:00.246824000Z
2025-04-16 21:11:02 (8524): Guest Log: 00:00:00.000207 main     OS Product: Linux
2025-04-16 21:11:02 (8524): Guest Log: 00:00:00.000232 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-16 21:11:02 (8524): Guest Log: 00:00:00.000253 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-16 21:11:02 (8524): Guest Log: 00:00:00.000275 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-16 21:11:02 (8524): Guest Log: 00:00:00.000275 main     Process ID: 1363
2025-04-16 21:11:02 (8524): Guest Log: 00:00:00.000276 main     Package type: LINUX_64BITS_GENERIC
2025-04-16 21:11:02 (8524): Guest Log: 00:00:00.001089 main     5.2.32 r132073 started. Verbose level = 0
2025-04-16 21:11:02 (8524): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-16 21:11:02 (8524): Guest Log: [INFO] Mounting shared directory
2025-04-16 21:11:02 (8524): Guest Log: [INFO] Checking for init_data.xml
2025-04-16 21:11:09 (8524): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-16 21:11:09 (8524): Guest Log: [INFO] Detected branch: prod
2025-04-16 21:11:09 (8524): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-16 21:11:09 (8524): Guest Log: Copying input files
2025-04-16 21:11:10 (8524): Guest Log: Copied input files into RunAtlas.
2025-04-16 21:11:10 (8524): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-16 21:11:10 (8524): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-16 21:11:10 (8524): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-16 21:11:10 (8524): Guest Log: Further information can be found at the LHC@home message board.
2025-04-16 21:11:12 (8524): Guest Log: 00:00:10.018072 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 733 988 000ns (GuestNow=1 744 863 071 982 865 000 ns GuestLast=1 744 837 860 248 877 000 ns fSetTimeLastLoop=true )
2025-04-16 21:11:20 (8524): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-16 21:11:21 (8524): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-16 21:11:21 (8524): Guest Log: 2.6.3.0 1664 0 30172 144948 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-16 21:11:22 (8524): Guest Log: copied the webapp to /var/www
2025-04-16 21:11:22 (8524): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-16 21:11:22 (8524): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-16 21:11:22 (8524): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-16 21:11:22 (8524): Guest Log:  *** Starting ATLAS job. (PandaID=6602098222 taskID=44075483) ***
2025-04-16 22:50:50 (8524): Status Report: Elapsed Time: '6000.000000'
2025-04-16 22:50:50 (8524): Status Report: CPU Time: '37046.078125'
2025-04-16 22:57:56 (8524): Guest Log:  *** Job finished ***
2025-04-16 22:57:56 (8524): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-16 22:57:56 (8524): Guest Log: 2025-04-17 05:57:41,320 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-04-16 22:57:56 (8524): Guest Log: 2025-04-17 05:57:45,391 | INFO     | [data] queue_monitor thread has finished
2025-04-16 22:57:56 (8524): Guest Log: 2025-04-17 05:57:46,787 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140303447988032)>', '<ExcThread(monitor, started 140302480303872)>']
2025-04-16 22:57:56 (8524): Guest Log: 2025-04-17 05:57:46,812 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-16 22:57:56 (8524): Guest Log: 2025-04-17 05:57:46,812 | INFO     | [monitor] control thread has ended
2025-04-16 22:57:56 (8524): Guest Log: 2025-04-17 05:57:48,859 [wrapper] supervise_pilot (15 min periods counter: 8)
2025-04-16 22:57:56 (8524): Guest Log: 2025-04-17 05:57:51,879 | INFO     | all workflow threads have been joined
2025-04-16 22:57:56 (8524): Guest Log: 2025-04-17 05:57:51,879 | INFO     | end of generic workflow (traces error code: 0)
2025-04-16 22:57:56 (8524): Guest Log: 2025-04-17 05:57:51,879 | INFO     | traces error code: 0
2025-04-16 22:57:56 (8524): Guest Log: 2025-04-17 05:57:51,879 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-16 22:57:56 (8524): Guest Log: 2025-04-17 05:57:51,957 [wrapper] ==== pilot stdout END ====
2025-04-16 22:57:56 (8524): Guest Log: 2025-04-17 05:57:51,962 [wrapper] ==== wrapper stdout RESUME ====
2025-04-16 22:57:56 (8524): Guest Log: 2025-04-17 05:57:51,966 [wrapper] pilotpid: 6023
2025-04-16 22:57:56 (8524): Guest Log: 2025-04-17 05:57:51,970 [wrapper] Pilot exit status: 0
2025-04-16 22:57:56 (8524): Guest Log: 2025-04-17 05:57:52,070 [wrapper] pandaids: 6602098222
2025-04-16 22:57:56 (8524): Guest Log: 2025-04-17 05:57:52,098 [wrapper] cleanup supervisor_pilot  6959 6024
2025-04-16 22:57:56 (8524): Guest Log: 2025-04-17 05:57:52,103 [wrapper] Test setup, not cleaning
2025-04-16 22:57:56 (8524): Guest Log: 2025-04-17 05:57:52,108 [wrapper] apfmon messages muted
2025-04-16 22:57:56 (8524): Guest Log: 2025-04-17 05:57:52,112 [wrapper] ==== wrapper stdout END ====
2025-04-16 22:57:56 (8524): Guest Log: 2025-04-17 05:57:52,116 [wrapper] ==== wrapper stderr END ====
2025-04-16 22:57:56 (8524): Guest Log:  *** Error codes and diagnostics ***
2025-04-16 22:57:56 (8524): Guest Log:     "exeErrorCode": 0,
2025-04-16 22:57:56 (8524): Guest Log:     "exeErrorDiag": "",
2025-04-16 22:57:56 (8524): Guest Log:     "pilotErrorCode": 0,
2025-04-16 22:57:56 (8524): Guest Log:     "pilotErrorDiag": "",
2025-04-16 22:57:56 (8524): Guest Log:  *** Listing of results directory ***
2025-04-16 22:57:56 (8524): Guest Log: total 189836
2025-04-16 22:57:56 (8524): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 13 18:06 pilot3.tar.gz
2025-04-16 22:57:56 (8524): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 13 18:09 runpilot2-wrapper.sh
2025-04-16 22:57:56 (8524): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 13 18:09 queuedata.json
2025-04-16 22:57:56 (8524): Guest Log: -rwxr-xr-x. 1 atlas atlas      9333 Apr 17 04:11 init_data.xml
2025-04-16 22:57:56 (8524): Guest Log: -rwxr-xr-x. 1 atlas atlas    508885 Apr 17 04:11 input.tar.gz
2025-04-16 22:57:56 (8524): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 17 04:11 start_atlas.sh
2025-04-16 22:57:56 (8524): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 17 04:11 EVNT.44075481._000299.pool.root.1 -> /data/./ATLAS.root_0
2025-04-16 22:57:56 (8524): Guest Log: -rw-r--r--. 1 atlas atlas      2576 Apr 17 04:11 pandaJob.out
2025-04-16 22:57:56 (8524): Guest Log: -rw-------. 1 atlas atlas       424 Apr 17 04:11 setup.sh.local
2025-04-16 22:57:56 (8524): Guest Log: -rw-------. 1 atlas atlas    986424 Apr 17 04:13 agis_schedconf.cvmfs.json
2025-04-16 22:57:56 (8524): Guest Log: -rw-------. 1 atlas atlas   1603529 Apr 17 04:13 agis_ddmendpoints.agis.ALL.json
2025-04-16 22:57:56 (8524): Guest Log: drwx------. 4 atlas atlas      4096 Apr 17 04:13 pilot3
2025-04-16 22:57:56 (8524): Guest Log: -rw-------. 1 atlas atlas 188898607 Apr 17 05:56 HITS.44075483._007678.pool.root.1
2025-04-16 22:57:56 (8524): Guest Log: -rw-------. 1 atlas atlas        95 Apr 17 05:57 pilot_heartbeat.json
2025-04-16 22:57:56 (8524): Guest Log: -rw-------. 1 atlas atlas      1029 Apr 17 05:57 memory_monitor_summary.json
2025-04-16 22:57:56 (8524): Guest Log: -rw-------. 1 atlas atlas    315667 Apr 17 05:57 log.44075483._007678.job.log.tgz.1
2025-04-16 22:57:56 (8524): Guest Log: -rw-------. 1 atlas atlas      7727 Apr 17 05:57 heartbeat.json
2025-04-16 22:57:56 (8524): Guest Log: -rw-------. 1 atlas atlas      4722 Apr 17 05:57 pilotlog.txt
2025-04-16 22:57:56 (8524): Guest Log: -rw-------. 1 atlas atlas    544565 Apr 17 05:57 log.44075483._007678.job.log.1
2025-04-16 22:57:56 (8524): Guest Log: -rw-------. 1 atlas atlas       357 Apr 17 05:57 output.list
2025-04-16 22:57:56 (8524): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 17 05:57 runtime_log
2025-04-16 22:57:56 (8524): Guest Log: -rw-------. 1 atlas atlas    880640 Apr 17 05:57 result.tar.gz
2025-04-16 22:57:56 (8524): Guest Log: -rw-r--r--. 1 atlas atlas     10953 Apr 17 05:57 runtime_log.err
2025-04-16 22:57:56 (8524): Guest Log: -rw-------. 1 atlas atlas       657 Apr 17 05:57 hDXNDmbwGO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmLXULDmPefpOn.diag
2025-04-16 22:57:56 (8524): Guest Log: Looking for outputfile HITS.44075483._007678.pool.root.1
2025-04-16 22:57:56 (8524): Guest Log: HITS file was successfully produced
2025-04-16 22:57:56 (8524): Guest Log: -rw-------. 1 atlas atlas 188898607 Apr 17 05:56 /home/atlas/RunAtlas/HITS.44075483._007678.pool.root.1
2025-04-16 22:57:56 (8524): Guest Log: Successfully finished the ATLAS job!
2025-04-16 22:57:56 (8524): Guest Log: Copying the results back to the shared directory!
2025-04-16 22:57:57 (8524): Guest Log:  *** Contents of shared directory: ***
2025-04-16 22:57:57 (8524): Guest Log: total 407684
2025-04-16 22:57:57 (8524): Guest Log: -rwxrwxrwx. 1 root root 227141396 Apr 17 04:10 ATLAS.root_0
2025-04-16 22:57:57 (8524): Guest Log: -rwxrwxrwx. 1 root root 188898607 Apr 17 05:57 HITS.pool.root.1
2025-04-16 22:57:57 (8524): Guest Log: -rwxrwxrwx. 1 root root      9333 Apr 17 04:10 init_data.xml
2025-04-16 22:57:57 (8524): Guest Log: -rwxrwxrwx. 1 root root    508885 Apr 13 22:04 input.tar.gz
2025-04-16 22:57:57 (8524): Guest Log: -rwxrwxrwx. 1 root root    880640 Apr 17 05:57 result.tar.gz
2025-04-16 22:57:57 (8524): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 13 22:04 start_atlas.sh
2025-04-16 22:57:57 (8524): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-16 22:57:57 (8524): VM Completion File Detected.
2025-04-16 22:57:57 (8524): Powering off VM.
2025-04-16 22:57:58 (8524): Successfully stopped VM.
2025-04-16 22:57:58 (8524): Deregistering VM. (boinc_30b25dfb08384360, slot#2)
2025-04-16 22:57:58 (8524): Removing network bandwidth throttle group from VM.
2025-04-16 22:57:58 (8524): Removing VM from VirtualBox.
22:58:03 (8524): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN