Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:20:02 (1773085): wrapper (7.7.26015): starting
10:20:02 (1773085): wrapper: running run_atlas (--nthreads 6)
[2025-04-14 10:20:02] Arguments: --nthreads 6
[2025-04-14 10:20:02] Threads: 6
[2025-04-14 10:20:02] Checking for CVMFS
[2025-04-14 10:20:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-14 10:20:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-14 10:20:02] Running cvmfs_config stat atlas.cern.ch
[2025-04-14 10:20:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-14 10:20:03] 2.11.5.0 3108580 2937 74756 144831 2 56 48966834 52428801 1858 130560 0 7887367 99.998 490449 66 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-04-14 10:20:03] CVMFS is ok
[2025-04-14 10:20:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-14 10:20:03] Checking for apptainer binary...
[2025-04-14 10:20:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-14 10:20:03] Running /usr/bin/apptainer --version
[2025-04-14 10:20:03] apptainer version 1.3.5-1.el9
[2025-04-14 10:20:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-14 10:20:03] testio008
[2025-04-14 10:20:03] apptainer works
[2025-04-14 10:20:03] Set ATHENA_PROC_NUMBER=6
[2025-04-14 10:20:03] Set ATHENA_CORE_NUMBER=6
[2025-04-14 10:20:03] Starting ATLAS job with PandaID=6595083078
[2025-04-14 10:20:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-14 11:19:21]  *** The last 200 lines of the pilot log: ***
[2025-04-14 11:19:21]  filetype=log
[2025-04-14 11:19:21]  guid=6819960e-97b1-4f26-9c86-6dfcc080ecbd
[2025-04-14 11:19:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-14 11:19:21]  is_altstaged=None
[2025-04-14 11:19:21]  is_tar=False
[2025-04-14 11:19:21]  lfn=log.44075164._014286.job.log.tgz.1
[2025-04-14 11:19:21]  mtime=0
[2025-04-14 11:19:21]  protocol_id=None
[2025-04-14 11:19:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-14 11:19:21]  replicas=None
[2025-04-14 11:19:21]  scope=mc23_13p6TeV
[2025-04-14 11:19:21]  status=None
[2025-04-14 11:19:21]  status_code=0
[2025-04-14 11:19:21]  storage_token=
[2025-04-14 11:19:21]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6595083078/log.44075164._014286.job.log.tgz.1
[2025-04-14 11:19:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f9/43/log.44075164._014286.job.log.tgz.1
[2025-04-14 11:19:21]  workdir=None
[2025-04-14 11:19:21] ]
[2025-04-14 11:19:21] 2025-04-14 02:18:59,942 | INFO     | transferring file log.44075164._014286.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6595083078/log.44075164._014286.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-04-14 11:19:21] 2025-04-14 02:18:59,943 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6595083078/log.44075164._014286.job.log.tgz.1 /var/lib/boinc/slots/2/log.44075164._014286.job
[2025-04-14 11:19:21] 2025-04-14 02:18:59,950 | INFO     | adding to output.list: log.44075164._014286.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f9/43/log.44075164._014286.job.log.tg
[2025-04-14 11:19:21] 2025-04-14 02:18:59,951 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-14 11:19:21] 2025-04-14 02:18:59,951 | INFO     | summary of transferred files:
[2025-04-14 11:19:21] 2025-04-14 02:18:59,951 | INFO     |  -- lfn=log.44075164._014286.job.log.tgz.1, status_code=0, status=transferred
[2025-04-14 11:19:21] 2025-04-14 02:18:59,951 | INFO     | stage-out finished correctly
[2025-04-14 11:19:21] 2025-04-14 02:18:59,994 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-14 11:19:21] 2025-04-14 02:19:00,070 | WARNING  | process 1783395 can no longer be monitored (due to stat problems) - aborting
[2025-04-14 11:19:21] 2025-04-14 02:19:00,071 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6595083078/memory_monitor_summary.json (trf name=prmon)
[2025-04-14 11:19:21] 2025-04-14 02:19:00,104 | INFO     | number of running child processes to parent process 1783395: 1
[2025-04-14 11:19:21] 2025-04-14 02:19:00,105 | INFO     | maximum number of monitored processes: 6
[2025-04-14 11:19:21] 2025-04-14 02:19:00,629 | INFO     | job 6595083078 has state=finished
[2025-04-14 11:19:21] 2025-04-14 02:19:00,629 | INFO     | preparing for final server update for job 6595083078 in state='finished'
[2025-04-14 11:19:21] 2025-04-14 02:19:00,630 | INFO     | this job has now completed (state=finished)
[2025-04-14 11:19:21] 2025-04-14 02:19:00,630 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-14 11:19:21] 2025-04-14 02:19:00,630 | INFO     | log transfer has been attempted: DONE
[2025-04-14 11:19:21] 2025-04-14 02:19:00,630 | INFO     | job 6595083078 has finished - writing final server update
[2025-04-14 11:19:21] 2025-04-14 02:19:00,630 | INFO     | total number of processed events: 400 (read)
[2025-04-14 11:19:21] 2025-04-14 02:19:00,630 | INFO     | executing command: lscpu
[2025-04-14 11:19:21] 2025-04-14 02:19:00,641 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-14 11:19:21] 2025-04-14 02:19:01,919 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-14 11:19:21] 2025-04-14 02:19:01,920 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6595083078/memory_monitor_summary.json (trf name=prmon)
[2025-04-14 11:19:21] 2025-04-14 02:19:01,920 | INFO     | extracted standard info from prmon json
[2025-04-14 11:19:21] 2025-04-14 02:19:01,920 | INFO     | extracted standard memory fields from prmon json
[2025-04-14 11:19:21] 2025-04-14 02:19:01,920 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-14 11:19:21] 2025-04-14 02:19:01,920 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-14 11:19:21] 2025-04-14 02:19:01,920 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-14 11:19:21] 2025-04-14 02:19:01,921 | INFO     | fitting pss+swap vs Time
[2025-04-14 11:19:21] 2025-04-14 02:19:01,921 | INFO     | sum of square deviations: 41117050.0
[2025-04-14 11:19:21] 2025-04-14 02:19:01,921 | INFO     | sum of deviations: 11230707804.0
[2025-04-14 11:19:21] 2025-04-14 02:19:01,921 | INFO     | mean x: 1744595477.0
[2025-04-14 11:19:21] 2025-04-14 02:19:01,921 | INFO     | mean y: 2443528.117647059
[2025-04-14 11:19:21] 2025-04-14 02:19:01,922 | INFO     | -- intersect: -476516227883.54736
[2025-04-14 11:19:21] 2025-04-14 02:19:01,922 | INFO     | intersect: -476516227883.54736
[2025-04-14 11:19:21] 2025-04-14 02:19:01,922 | INFO     | chi2: 1.658450072852823
[2025-04-14 11:19:21] 2025-04-14 02:19:01,922 | INFO     | -- intersect: -476516227883.54736
[2025-04-14 11:19:21] 2025-04-14 02:19:01,922 | INFO     | current memory leak: 273.14 B/s (using 51 data points, chi2=1.66)
[2025-04-14 11:19:21] 2025-04-14 02:19:01,922 | INFO     | ..............................
[2025-04-14 11:19:21] 2025-04-14 02:19:01,922 | INFO     | . Timing measurements:
[2025-04-14 11:19:21] 2025-04-14 02:19:01,922 | INFO     | . get job = 0 s
[2025-04-14 11:19:21] 2025-04-14 02:19:01,922 | INFO     | . initial setup = 21 s
[2025-04-14 11:19:21] 2025-04-14 02:19:01,922 | INFO     | . payload setup = 1 s
[2025-04-14 11:19:21] 2025-04-14 02:19:01,922 | INFO     | . stage-in = 0 s
[2025-04-14 11:19:21] 2025-04-14 02:19:01,922 | INFO     | . payload execution = 3491 s
[2025-04-14 11:19:21] 2025-04-14 02:19:01,922 | INFO     | . stage-out = 0 s
[2025-04-14 11:19:21] 2025-04-14 02:19:01,922 | INFO     | . log creation = 0 s
[2025-04-14 11:19:21] 2025-04-14 02:19:01,922 | INFO     | ..............................
[2025-04-14 11:19:21] 2025-04-14 02:19:01,963 | INFO     | 
[2025-04-14 11:19:21] 2025-04-14 02:19:01,963 | INFO     | job summary report
[2025-04-14 11:19:21] 2025-04-14 02:19:01,963 | INFO     | --------------------------------------------------
[2025-04-14 11:19:21] 2025-04-14 02:19:01,963 | INFO     | PanDA job id: 6595083078
[2025-04-14 11:19:21] 2025-04-14 02:19:01,963 | INFO     | task id: 44075164
[2025-04-14 11:19:21] 2025-04-14 02:19:01,963 | INFO     | errors: (none)
[2025-04-14 11:19:21] 2025-04-14 02:19:01,963 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-14 11:19:21] 2025-04-14 02:19:01,963 | INFO     | pilot state: finished 
[2025-04-14 11:19:21] 2025-04-14 02:19:01,963 | INFO     | transexitcode: 0
[2025-04-14 11:19:21] 2025-04-14 02:19:01,963 | INFO     | exeerrorcode: 0
[2025-04-14 11:19:21] 2025-04-14 02:19:01,964 | INFO     | exeerrordiag: 
[2025-04-14 11:19:21] 2025-04-14 02:19:01,964 | INFO     | exitcode: 0
[2025-04-14 11:19:21] 2025-04-14 02:19:01,964 | INFO     | exitmsg: OK
[2025-04-14 11:19:21] 2025-04-14 02:19:01,964 | INFO     | cpuconsumptiontime: 15270 s
[2025-04-14 11:19:21] 2025-04-14 02:19:01,964 | INFO     | nevents: 400
[2025-04-14 11:19:21] 2025-04-14 02:19:01,964 | INFO     | neventsw: 0
[2025-04-14 11:19:21] 2025-04-14 02:19:01,964 | INFO     | pid: 1783395
[2025-04-14 11:19:21] 2025-04-14 02:19:01,964 | INFO     | pgrp: 1783395
[2025-04-14 11:19:21] 2025-04-14 02:19:01,964 | INFO     | corecount: 6
[2025-04-14 11:19:21] 2025-04-14 02:19:01,964 | INFO     | event service: False
[2025-04-14 11:19:21] 2025-04-14 02:19:01,964 | INFO     | sizes: {0: 2417325, 1: 2417531, 11: 2417559, 3496: 2443186, 3497: 2452183, 3499: 2452297}
[2025-04-14 11:19:21] 2025-04-14 02:19:01,964 | INFO     | --------------------------------------------------
[2025-04-14 11:19:21] 2025-04-14 02:19:01,964 | INFO     | 
[2025-04-14 11:19:21] 2025-04-14 02:19:01,964 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-04-14 11:19:21] 2025-04-14 02:19:01,972 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-14 11:19:21] 2025-04-14 02:19:01,972 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-14 11:19:21] 2025-04-14 02:19:01,973 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-14 11:19:21] 2025-04-14 02:19:01,973 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-14 11:19:21] 2025-04-14 02:19:01,973 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-14 11:19:21] 2025-04-14 02:19:01,973 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-14 11:19:21] 2025-04-14 02:19:01,973 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-14 11:19:21] 2025-04-14 02:19:01,973 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-14 11:19:21] 2025-04-14 02:19:01,973 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-14 11:19:21] 2025-04-14 02:19:01,973 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-14 11:19:21] 2025-04-14 02:19:01,973 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-14 11:19:21] 2025-04-14 02:19:01,973 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-14 11:19:21] 2025-04-14 02:19:01,973 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-14 11:19:21] 2025-04-14 02:19:01,973 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-14 11:19:21] 2025-04-14 02:19:01,973 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-14 11:19:21] 2025-04-14 02:19:01,973 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-14 11:19:21] 2025-04-14 02:19:01,973 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-14 11:19:21] 2025-04-14 02:19:01,973 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-14 11:19:21] 2025-04-14 02:19:01,973 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-14 11:19:21] 2025-04-14 02:19:01,973 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-14 11:19:21] 2025-04-14 02:19:01,973 | INFO     | job 6595083078 has completed (purged errors)
[2025-04-14 11:19:21] 2025-04-14 02:19:01,973 | INFO     | overall cleanup function is called
[2025-04-14 11:19:21] 2025-04-14 02:19:02,979 | INFO     | --- collectZombieJob: --- 10, [1783395]
[2025-04-14 11:19:21] 2025-04-14 02:19:02,979 | INFO     | zombie collector waiting for pid 1783395
[2025-04-14 11:19:21] 2025-04-14 02:19:02,979 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-14 11:19:21] 2025-04-14 02:19:02,979 | INFO     | collected zombie processes
[2025-04-14 11:19:21] 2025-04-14 02:19:02,979 | INFO     | will attempt to kill all subprocesses of pid=1783395
[2025-04-14 11:19:21] 2025-04-14 02:19:03,014 | INFO     | process IDs to be killed: [1783395] (in reverse order)
[2025-04-14 11:19:21] 2025-04-14 02:19:03,033 | WARNING  | found no corresponding commands to process id(s)
[2025-04-14 11:19:21] 2025-04-14 02:19:03,033 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-14 11:19:21] 2025-04-14 02:19:03,035 | INFO     | did not find any defunct processes belonging to 1783395
[2025-04-14 11:19:21] 2025-04-14 02:19:03,036 | INFO     | did not find any defunct processes belonging to 1783395
[2025-04-14 11:19:21] 2025-04-14 02:19:03,036 | INFO     | ready for new job
[2025-04-14 11:19:21] 2025-04-14 02:19:03,036 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-14 11:19:21] 2025-04-14 02:19:03,037 | INFO     | **************************************
[2025-04-14 11:19:21] 2025-04-14 02:19:03,037 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-14 11:19:21] 2025-04-14 02:19:03,037 | INFO     | **************************************
[2025-04-14 11:19:21] 2025-04-14 02:19:03,037 | INFO     | 
[2025-04-14 11:19:21] 2025-04-14 02:19:03,038 | INFO     | architecture information:
[2025-04-14 11:19:21] 2025-04-14 02:19:03,038 | INFO     | executing command: cat /etc/os-release
[2025-04-14 11:19:21] 2025-04-14 02:19:03,044 | INFO     | cat /etc/os-release:
[2025-04-14 11:19:21] NAME="CentOS Linux"
[2025-04-14 11:19:21] VERSION="7 (Core)"
[2025-04-14 11:19:21] ID="centos"
[2025-04-14 11:19:21] ID_LIKE="rhel fedora"
[2025-04-14 11:19:21] VERSION_ID="7"
[2025-04-14 11:19:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-14 11:19:21] ANSI_COLOR="0;31"
[2025-04-14 11:19:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-14 11:19:21] HOME_URL="https://www.centos.org/"
[2025-04-14 11:19:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-14 11:19:21] 
[2025-04-14 11:19:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-14 11:19:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-14 11:19:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-14 11:19:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-14 11:19:21] 
[2025-04-14 11:19:21] 2025-04-14 02:19:03,044 | INFO     | **************************************
[2025-04-14 11:19:21] 2025-04-14 02:19:03,546 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-04-14 11:19:21] 2025-04-14 02:19:03,553 | INFO     | sufficient remaining disk space (265543483392 B)
[2025-04-14 11:19:21] 2025-04-14 02:19:03,553 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-14 11:19:21] 2025-04-14 02:19:03,553 | INFO     | current server update state: UPDATING_FINAL
[2025-04-14 11:19:21] 2025-04-14 02:19:03,553 | INFO     | update_server=False
[2025-04-14 11:19:21] 2025-04-14 02:19:03,553 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-14 11:19:21] 2025-04-14 02:19:03,553 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-14 11:19:21] 2025-04-14 02:19:03,553 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-14 11:19:21] 2025-04-14 02:19:03,554 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-14 11:19:21] 2025-04-14 02:19:03,554 | INFO     | found 0 job(s) in 20 queues
[2025-04-14 11:19:21] 2025-04-14 02:19:03,554 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-14 11:19:21] 2025-04-14 02:19:03,554 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-14 11:19:21] 2025-04-14 02:19:03,554 | INFO     | all job control threads have been joined
[2025-04-14 11:19:21] 2025-04-14 02:19:03,612 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-14 11:19:21] 2025-04-14 02:19:03,612 | INFO     | aborting loop
[2025-04-14 11:19:21] 2025-04-14 02:19:03,738 | INFO     | all data control threads have been joined
[2025-04-14 11:19:21] 2025-04-14 02:19:03,873 | INFO     | all payload control threads have been joined
[2025-04-14 11:19:21] 2025-04-14 02:19:04,558 | INFO     | [job] queue monitor thread has finished
[2025-04-14 11:19:21] 2025-04-14 02:19:04,558 | INFO     | [job] retrieve thread has finished
[2025-04-14 11:19:21] 2025-04-14 02:19:04,559 | INFO     | [job] control thread has finished
[2025-04-14 11:19:21] 2025-04-14 02:19:04,618 | INFO     | [job] job monitor thread has finished
[2025-04-14 11:19:21] 2025-04-14 02:19:04,656 | INFO     | [payload] failed_post thread has finished
[2025-04-14 11:19:21] 2025-04-14 02:19:04,743 | INFO     | [data] control thread has finished
[2025-04-14 11:19:21] 2025-04-14 02:19:04,878 | INFO     | [payload] control thread has finished
[2025-04-14 11:19:21] 2025-04-14 02:19:05,070 | INFO     | [payload] execute_payloads thread has finished
[2025-04-14 11:19:21] 2025-04-14 02:19:05,311 | INFO     | [job] validate thread has finished
[2025-04-14 11:19:21] 2025-04-14 02:19:05,352 | INFO     | [job] create_data_payload thread has finished
[2025-04-14 11:19:21] 2025-04-14 02:19:05,353 | INFO     | [payload] validate_pre thread has finished
[2025-04-14 11:19:21] 2025-04-14 02:19:05,413 | INFO     | [payload] validate_post thread has finished
[2025-04-14 11:19:21] 2025-04-14 02:19:05,455 | INFO     | [data] copytool_in thread has finished
[2025-04-14 11:19:21] 2025-04-14 02:19:05,558 | INFO     | [data] copytool_out thread has finished
[2025-04-14 11:19:21] 2025-04-14 02:19:06,041 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-14 11:19:21] 2025-04-14 02:19:10,042 | INFO     | [data] queue_monitor thread has finished
[2025-04-14 11:19:21] 2025-04-14 02:19:13,803 | INFO     | job.realtimelogging is not enabled
[2025-04-14 11:19:21] 2025-04-14 02:19:14,808 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-14 11:19:21] 2025-04-14 02:19:15,962 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139708819572544)>', '<ExcThread(monitor, started 139707878983424)>']
[2025-04-14 11:19:21] 2025-04-14 02:19:16,618 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-14 11:19:21] 2025-04-14 02:19:16,618 | INFO     | [monitor] control thread has ended
[2025-04-14 11:19:21] 2025-04-14 02:19:20,988 | INFO     | all workflow threads have been joined
[2025-04-14 11:19:21] 2025-04-14 02:19:20,988 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-14 11:19:21] 2025-04-14 02:19:20,988 | INFO     | traces error code: 0
[2025-04-14 11:19:21] 2025-04-14 02:19:20,988 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-14 11:19:21] 2025-04-14 02:19:21,037 [wrapper] ==== pilot stdout END ====
[2025-04-14 11:19:21] 2025-04-14 02:19:21,038 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-14 11:19:21] 2025-04-14 02:19:21,039 [wrapper] pilotpid: 1776797
[2025-04-14 11:19:21] 2025-04-14 02:19:21,040 [wrapper] Pilot exit status: 0
[2025-04-14 11:19:21] 2025-04-14 02:19:21,043 [wrapper] pandaids: 6595083078
[2025-04-14 11:19:21] 2025-04-14 02:19:21,053 [wrapper] cleanup supervisor_pilot 1834851 1776798
[2025-04-14 11:19:21] 2025-04-14 02:19:21,054 [wrapper] Test setup, not cleaning
[2025-04-14 11:19:21] 2025-04-14 02:19:21,055 [wrapper] apfmon messages muted
[2025-04-14 11:19:21] 2025-04-14 02:19:21,056 [wrapper] ==== wrapper stdout END ====
[2025-04-14 11:19:21] 2025-04-14 02:19:21,057 [wrapper] ==== wrapper stderr END ====
[2025-04-14 11:19:21]  *** Error codes and diagnostics ***
[2025-04-14 11:19:21]     "exeErrorCode": 0,
[2025-04-14 11:19:21]     "exeErrorDiag": "",
[2025-04-14 11:19:21]     "pilotErrorCode": 0,
[2025-04-14 11:19:21]     "pilotErrorDiag": "",
[2025-04-14 11:19:21]  *** Listing of results directory ***
[2025-04-14 11:19:21] total 410948
[2025-04-14 11:19:21] -rw-r--r--. 1 boinc boinc    495897 Apr  9 17:45 pilot3.tar.gz
[2025-04-14 11:19:21] -rw-r--r--. 1 boinc boinc      5111 Apr  9 17:52 queuedata.json
[2025-04-14 11:19:21] -rwx------. 1 boinc boinc     37140 Apr  9 17:54 runpilot2-wrapper.sh
[2025-04-14 11:19:21] -rw-r--r--. 1 boinc boinc       100 Apr 14 10:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-14 11:19:21] -rwxr-xr-x. 1 boinc boinc      7986 Apr 14 10:20 run_atlas
[2025-04-14 11:19:21] -rw-r--r--. 1 boinc boinc       105 Apr 14 10:20 job.xml
[2025-04-14 11:19:21] -rw-r--r--. 2 boinc boinc     17569 Apr 14 10:20 start_atlas.sh
[2025-04-14 11:19:21] drwxrwx--x. 2 boinc boinc        68 Apr 14 10:20 shared
[2025-04-14 11:19:21] -rw-r--r--. 2 boinc boinc    508883 Apr 14 10:20 input.tar.gz
[2025-04-14 11:19:21] -rw-r--r--. 1 boinc boinc      9509 Apr 14 10:20 init_data.xml
[2025-04-14 11:19:21] -rw-r--r--. 2 boinc boinc 222441834 Apr 14 10:20 EVNT.44075162._000572.pool.root.1
[2025-04-14 11:19:21] -rw-r--r--. 1 boinc boinc         0 Apr 14 10:20 boinc_lockfile
[2025-04-14 11:19:21] -rw-r--r--. 1 boinc boinc      2549 Apr 14 10:20 pandaJob.out
[2025-04-14 11:19:21] -rw-------. 1 boinc boinc       424 Apr 14 10:20 setup.sh.local
[2025-04-14 11:19:21] -rw-------. 1 boinc boinc    985912 Apr 14 10:20 agis_schedconf.cvmfs.json
[2025-04-14 11:19:21] -rw-------. 1 boinc boinc   1603529 Apr 14 10:20 agis_ddmendpoints.agis.ALL.json
[2025-04-14 11:19:21] drwx------. 4 boinc boinc      4096 Apr 14 10:20 pilot3
[2025-04-14 11:19:21] -rw-------. 1 boinc boinc        95 Apr 14 11:18 pilot_heartbeat.json
[2025-04-14 11:19:21] -rw-r--r--. 1 boinc boinc       530 Apr 14 11:18 boinc_task_state.xml
[2025-04-14 11:19:21] -rw-------. 1 boinc boinc 193300570 Apr 14 11:18 HITS.44075164._014286.pool.root.1
[2025-04-14 11:19:21] -rw-------. 1 boinc boinc      1033 Apr 14 11:18 memory_monitor_summary.json
[2025-04-14 11:19:21] -rw-------. 1 boinc boinc    250062 Apr 14 11:18 log.44075164._014286.job.log.tgz.1
[2025-04-14 11:19:21] -rw-------. 1 boinc boinc      7666 Apr 14 11:19 heartbeat.json
[2025-04-14 11:19:21] -rw-r--r--. 1 boinc boinc        27 Apr 14 11:19 wrapper_checkpoint.txt
[2025-04-14 11:19:21] -rw-r--r--. 1 boinc boinc      8192 Apr 14 11:19 boinc_mmap_file
[2025-04-14 11:19:21] -rw-------. 1 boinc boinc      4549 Apr 14 11:19 pilotlog.txt
[2025-04-14 11:19:21] -rw-------. 1 boinc boinc    367238 Apr 14 11:19 log.44075164._014286.job.log.1
[2025-04-14 11:19:21] -rw-------. 1 boinc boinc       357 Apr 14 11:19 output.list
[2025-04-14 11:19:21] -rw-r--r--. 1 boinc boinc       620 Apr 14 11:19 runtime_log
[2025-04-14 11:19:21] -rw-------. 1 boinc boinc    634880 Apr 14 11:19 result.tar.gz
[2025-04-14 11:19:21] -rw-------. 1 boinc boinc       641 Apr 14 11:19 vewNDmGNgM7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm4kLLDmH1DW6m.diag
[2025-04-14 11:19:21] -rw-r--r--. 1 boinc boinc     10971 Apr 14 11:19 runtime_log.err
[2025-04-14 11:19:21] -rw-r--r--. 1 boinc boinc     20878 Apr 14 11:19 stderr.txt
[2025-04-14 11:19:21] HITS file was successfully produced:
[2025-04-14 11:19:21] -rw-------. 1 boinc boinc 193300570 Apr 14 11:18 shared/HITS.pool.root.1
[2025-04-14 11:19:21]  *** Contents of shared directory: ***
[2025-04-14 11:19:21] total 407144
[2025-04-14 11:19:21] -rw-r--r--. 2 boinc boinc     17569 Apr 14 10:20 start_atlas.sh
[2025-04-14 11:19:21] -rw-r--r--. 2 boinc boinc    508883 Apr 14 10:20 input.tar.gz
[2025-04-14 11:19:21] -rw-r--r--. 2 boinc boinc 222441834 Apr 14 10:20 ATLAS.root_0
[2025-04-14 11:19:21] -rw-------. 1 boinc boinc 193300570 Apr 14 11:18 HITS.pool.root.1
[2025-04-14 11:19:21] -rw-------. 1 boinc boinc    634880 Apr 14 11:19 result.tar.gz
11:19:22 (1773085): run_atlas exited; CPU time 15290.596139
11:19:22 (1773085): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN