Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:59:05 (3669135): wrapper (7.7.26015): starting
13:59:05 (3669135): wrapper: running run_atlas (--nthreads 8)
[2025-04-13 13:59:05] Arguments: --nthreads 8
[2025-04-13 13:59:05] Threads: 8
[2025-04-13 13:59:05] Checking for CVMFS
[2025-04-13 13:59:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-13 13:59:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-13 13:59:07] Running cvmfs_config stat atlas.cern.ch
[2025-04-13 13:59:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-13 13:59:09] 2.12.6.0 4000270 88433 246916 144819 1 183 25875634 32935936 26269 130560 0 37736346 99.660 31529567 8793 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-13 13:59:09] CVMFS is ok
[2025-04-13 13:59:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-13 13:59:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-13 13:59:09] Further information can be found at the LHC@home message board.
[2025-04-13 13:59:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-13 13:59:09] Checking for apptainer binary...
[2025-04-13 13:59:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-13 13:59:09] Running /usr/bin/apptainer --version
[2025-04-13 13:59:10] apptainer version 1.4.0-1.el9
[2025-04-13 13:59:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-13 13:59:11] c6-12-25-3.aglt2.org
[2025-04-13 13:59:11] apptainer works
[2025-04-13 13:59:11] Set ATHENA_PROC_NUMBER=8
[2025-04-13 13:59:11] Set ATHENA_CORE_NUMBER=8
[2025-04-13 13:59:12] Starting ATLAS job with PandaID=6601724574
[2025-04-13 13:59:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-13 21:09:31]  *** The last 200 lines of the pilot log: ***
[2025-04-13 21:09:31] 2025-04-14 01:09:09,200 | INFO     | monitor loop #1247: job 0:6601724574 is in state 'finished'
[2025-04-13 21:09:31] 2025-04-14 01:09:09,200 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-13 21:09:31] 2025-04-14 01:09:11,708 | INFO     | monitor loop #1248: job 0:6601724574 is in state 'finished'
[2025-04-13 21:09:31] 2025-04-14 01:09:11,708 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-13 21:09:31] 2025-04-14 01:09:11,803 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-13 21:09:31] 2025-04-14 01:09:11,804 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6601724574/memory_monitor_summary.json (trf name=prmon)
[2025-04-13 21:09:31] 2025-04-14 01:09:11,806 | INFO     | extracted standard info from prmon json
[2025-04-13 21:09:31] 2025-04-14 01:09:11,806 | INFO     | extracted standard memory fields from prmon json
[2025-04-13 21:09:31] 2025-04-14 01:09:11,806 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-13 21:09:31] 2025-04-14 01:09:11,807 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-13 21:09:31] 2025-04-14 01:09:11,807 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-13 21:09:31] 2025-04-14 01:09:11,833 | INFO     | fitting pss+swap vs Time
[2025-04-13 21:09:31] 2025-04-14 01:09:11,835 | INFO     | sum of square deviations: 22482495227.51567
[2025-04-13 21:09:31] 2025-04-14 01:09:11,875 | INFO     | sum of deviations: 451422692913.47534
[2025-04-13 21:09:31] 2025-04-14 01:09:11,876 | INFO     | mean x: 1744580174.8752997
[2025-04-13 21:09:31] 2025-04-14 01:09:11,876 | INFO     | mean y: 2399061.201438849
[2025-04-13 21:09:31] 2025-04-14 01:09:11,876 | INFO     | -- intersect: -35026767967.457306
[2025-04-13 21:09:31] 2025-04-14 01:09:11,876 | INFO     | intersect: -35026767967.457306
[2025-04-13 21:09:31] 2025-04-14 01:09:11,878 | INFO     | chi2: 8.927956824248787
[2025-04-13 21:09:31] 2025-04-14 01:09:11,880 | INFO     | sum of square deviations: 21683465983.638126
[2025-04-13 21:09:31] 2025-04-14 01:09:11,906 | INFO     | sum of deviations: 473266468040.88586
[2025-04-13 21:09:31] 2025-04-14 01:09:11,907 | INFO     | mean x: 1744580022.3859224
[2025-04-13 21:09:31] 2025-04-14 01:09:11,907 | INFO     | mean y: 2403178.4975728155
[2025-04-13 21:09:31] 2025-04-14 01:09:11,907 | INFO     | -- intersect: -38075052982.44522
[2025-04-13 21:09:31] 2025-04-14 01:09:11,908 | INFO     | intersect: -38075052982.44522
[2025-04-13 21:09:31] 2025-04-14 01:09:11,909 | INFO     | chi2: 8.155343932158496
[2025-04-13 21:09:31] 2025-04-14 01:09:11,910 | INFO     | current chi2=8.155343932158496 (change=8.65386008579067 %)
[2025-04-13 21:09:31] 2025-04-14 01:09:11,910 | INFO     | right removable region: 411
[2025-04-13 21:09:31] 2025-04-14 01:09:11,911 | INFO     | sum of square deviations: 21683293965.172356
[2025-04-13 21:09:31] 2025-04-14 01:09:11,922 | INFO     | sum of deviations: 331594359921.6626
[2025-04-13 21:09:31] 2025-04-14 01:09:11,922 | INFO     | mean x: 1744580327.381068
[2025-04-13 21:09:31] 2025-04-14 01:09:11,923 | INFO     | mean y: 2421904.084951456
[2025-04-13 21:09:31] 2025-04-14 01:09:11,923 | INFO     | -- intersect: -26676780892.27171
[2025-04-13 21:09:31] 2025-04-14 01:09:11,923 | INFO     | intersect: -26676780892.27171
[2025-04-13 21:09:31] 2025-04-14 01:09:11,925 | INFO     | chi2: 5.605408229609478
[2025-04-13 21:09:31] 2025-04-14 01:09:11,925 | INFO     | current chi2=5.605408229609478 (change=37.21510598724108 %)
[2025-04-13 21:09:31] 2025-04-14 01:09:11,927 | INFO     | sum of square deviations: 20903332337.100807
[2025-04-13 21:09:31] 2025-04-14 01:09:11,937 | INFO     | sum of deviations: 252434777069.5136
[2025-04-13 21:09:31] 2025-04-14 01:09:11,937 | INFO     | mean x: 1744580479.879607
[2025-04-13 21:09:31] 2025-04-14 01:09:11,938 | INFO     | mean y: 2437377.4594594594
[2025-04-13 21:09:31] 2025-04-14 01:09:11,938 | INFO     | -- intersect: -21065628585.238335
[2025-04-13 21:09:31] 2025-04-14 01:09:11,938 | INFO     | intersect: -21065628585.238335
[2025-04-13 21:09:31] 2025-04-14 01:09:11,940 | INFO     | chi2: 4.293753903813839
[2025-04-13 21:09:31] 2025-04-14 01:09:11,940 | INFO     | current chi2=4.293753903813839 (change=23.39980019416036 %)
[2025-04-13 21:09:31] 2025-04-14 01:09:11,940 | INFO     | left removable region: 20
[2025-04-13 21:09:31] 2025-04-14 01:09:11,942 | INFO     | sum of square deviations: 18533604691.488457
[2025-04-13 21:09:31] 2025-04-14 01:09:11,952 | INFO     | sum of deviations: 116683024058.37073
[2025-04-13 21:09:31] 2025-04-14 01:09:11,954 | INFO     | mean x: 1744580601.8925831
[2025-04-13 21:09:31] 2025-04-14 01:09:11,955 | INFO     | mean y: 2475108.1278772377
[2025-04-13 21:09:31] 2025-04-14 01:09:11,955 | INFO     | -- intersect: -10980975965.25588
[2025-04-13 21:09:31] 2025-04-14 01:09:11,955 | INFO     | intersect: -10980975965.25588
[2025-04-13 21:09:31] 2025-04-14 01:09:11,957 | INFO     | chi2: 0.6832589178185197
[2025-04-13 21:09:31] 2025-04-14 01:09:11,957 | INFO     | -- intersect: -10980975965.25588
[2025-04-13 21:09:31] 2025-04-14 01:09:11,958 | INFO     | current memory leak: 6.30 B/s (using 391 data points, chi2=0.68)
[2025-04-13 21:09:31] 2025-04-14 01:09:11,960 | INFO     | ..............................
[2025-04-13 21:09:31] 2025-04-14 01:09:11,960 | INFO     | . Timing measurements:
[2025-04-13 21:09:31] 2025-04-14 01:09:11,960 | INFO     | . get job = 0 s
[2025-04-13 21:09:31] 2025-04-14 01:09:11,961 | INFO     | . initial setup = 12 s
[2025-04-13 21:09:31] 2025-04-14 01:09:11,961 | INFO     | . payload setup = 68 s
[2025-04-13 21:09:31] 2025-04-14 01:09:11,961 | INFO     | . stage-in = 1 s
[2025-04-13 21:09:31] 2025-04-14 01:09:11,961 | INFO     | . payload execution = 25477 s
[2025-04-13 21:09:31] 2025-04-14 01:09:11,962 | INFO     | . stage-out = 6 s
[2025-04-13 21:09:31] 2025-04-14 01:09:11,962 | INFO     | . log creation = 0 s
[2025-04-13 21:09:31] 2025-04-14 01:09:11,962 | INFO     | ..............................
[2025-04-13 21:09:31] 2025-04-14 01:09:12,257 | INFO     | 
[2025-04-13 21:09:31] 2025-04-14 01:09:12,258 | INFO     | job summary report
[2025-04-13 21:09:31] 2025-04-14 01:09:12,258 | INFO     | --------------------------------------------------
[2025-04-13 21:09:31] 2025-04-14 01:09:12,258 | INFO     | PanDA job id: 6601724574
[2025-04-13 21:09:31] 2025-04-14 01:09:12,259 | INFO     | task id: 44075164
[2025-04-13 21:09:31] 2025-04-14 01:09:12,259 | INFO     | errors: (none)
[2025-04-13 21:09:31] 2025-04-14 01:09:12,259 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-13 21:09:31] 2025-04-14 01:09:12,259 | INFO     | pilot state: finished 
[2025-04-13 21:09:31] 2025-04-14 01:09:12,259 | INFO     | transexitcode: 0
[2025-04-13 21:09:31] 2025-04-14 01:09:12,260 | INFO     | exeerrorcode: 0
[2025-04-13 21:09:31] 2025-04-14 01:09:12,260 | INFO     | exeerrordiag: 
[2025-04-13 21:09:31] 2025-04-14 01:09:12,260 | INFO     | exitcode: 0
[2025-04-13 21:09:31] 2025-04-14 01:09:12,260 | INFO     | exitmsg: OK
[2025-04-13 21:09:31] 2025-04-14 01:09:12,260 | INFO     | cpuconsumptiontime: 111296 s
[2025-04-13 21:09:31] 2025-04-14 01:09:12,261 | INFO     | nevents: 400
[2025-04-13 21:09:31] 2025-04-14 01:09:12,261 | INFO     | neventsw: 0
[2025-04-13 21:09:31] 2025-04-14 01:09:12,261 | INFO     | pid: 3692866
[2025-04-13 21:09:31] 2025-04-14 01:09:12,261 | INFO     | pgrp: 3692866
[2025-04-13 21:09:31] 2025-04-14 01:09:12,261 | INFO     | corecount: 8
[2025-04-13 21:09:31] 2025-04-14 01:09:12,261 | INFO     | event service: False
[2025-04-13 21:09:31] 2025-04-14 01:09:12,262 | INFO     | sizes: {0: 2417048, 2: 2417104, 4: 2417132, 5: 2417359, 6: 2417415, 19: 2417415, 31: 2417571, 42: 2417599, 56: 2417861, 68: 2417889, 25546: 2452399, 25547: 2452678
[2025-04-13 21:09:31] 2025-04-14 01:09:12,262 | INFO     | --------------------------------------------------
[2025-04-13 21:09:31] 2025-04-14 01:09:12,262 | INFO     | 
[2025-04-13 21:09:31] 2025-04-14 01:09:12,262 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-04-13 21:09:31] 2025-04-14 01:09:12,305 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-13 21:09:31] 2025-04-14 01:09:12,306 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-13 21:09:31] 2025-04-14 01:09:12,306 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-13 21:09:31] 2025-04-14 01:09:12,306 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-13 21:09:31] 2025-04-14 01:09:12,307 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-13 21:09:31] 2025-04-14 01:09:12,307 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-13 21:09:31] 2025-04-14 01:09:12,321 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-13 21:09:31] 2025-04-14 01:09:12,321 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-13 21:09:31] 2025-04-14 01:09:12,322 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-13 21:09:31] 2025-04-14 01:09:12,322 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-13 21:09:31] 2025-04-14 01:09:12,322 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-13 21:09:31] 2025-04-14 01:09:12,322 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-13 21:09:31] 2025-04-14 01:09:12,323 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-13 21:09:31] 2025-04-14 01:09:12,323 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-13 21:09:31] 2025-04-14 01:09:12,323 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-13 21:09:31] 2025-04-14 01:09:12,323 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-13 21:09:31] 2025-04-14 01:09:12,324 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-13 21:09:31] 2025-04-14 01:09:12,325 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-13 21:09:31] 2025-04-14 01:09:12,325 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-13 21:09:31] 2025-04-14 01:09:12,325 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-13 21:09:31] 2025-04-14 01:09:12,325 | INFO     | job 6601724574 has completed (purged errors)
[2025-04-13 21:09:31] 2025-04-14 01:09:12,326 | INFO     | overall cleanup function is called
[2025-04-13 21:09:31] 2025-04-14 01:09:13,341 | INFO     | --- collectZombieJob: --- 10, [3692866]
[2025-04-13 21:09:31] 2025-04-14 01:09:13,341 | INFO     | zombie collector waiting for pid 3692866
[2025-04-13 21:09:31] 2025-04-14 01:09:13,341 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-13 21:09:31] 2025-04-14 01:09:13,342 | INFO     | collected zombie processes
[2025-04-13 21:09:31] 2025-04-14 01:09:13,342 | INFO     | will attempt to kill all subprocesses of pid=3692866
[2025-04-13 21:09:31] 2025-04-14 01:09:17,349 | INFO     | process IDs to be killed: [3692866] (in reverse order)
[2025-04-13 21:09:31] 2025-04-14 01:09:17,872 | WARNING  | found no corresponding commands to process id(s)
[2025-04-13 21:09:31] 2025-04-14 01:09:17,873 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-13 21:09:31] 2025-04-14 01:09:17,999 | INFO     | did not find any defunct processes belonging to 3692866
[2025-04-13 21:09:31] 2025-04-14 01:09:18,115 | INFO     | did not find any defunct processes belonging to 3692866
[2025-04-13 21:09:31] 2025-04-14 01:09:18,119 | INFO     | ready for new job
[2025-04-13 21:09:31] 2025-04-14 01:09:18,119 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-13 21:09:31] 2025-04-14 01:09:18,142 | INFO     | **************************************
[2025-04-13 21:09:31] 2025-04-14 01:09:18,146 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-13 21:09:31] 2025-04-14 01:09:18,146 | INFO     | **************************************
[2025-04-13 21:09:31] 2025-04-14 01:09:18,147 | INFO     | 
[2025-04-13 21:09:31] 2025-04-14 01:09:18,201 | INFO     | architecture information:
[2025-04-13 21:09:31] 2025-04-14 01:09:18,210 | INFO     | executing command: cat /etc/os-release
[2025-04-13 21:09:31] 2025-04-14 01:09:18,241 | INFO     | cat /etc/os-release:
[2025-04-13 21:09:31] NAME="CentOS Linux"
[2025-04-13 21:09:31] VERSION="7 (Core)"
[2025-04-13 21:09:31] ID="centos"
[2025-04-13 21:09:31] ID_LIKE="rhel fedora"
[2025-04-13 21:09:31] VERSION_ID="7"
[2025-04-13 21:09:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-13 21:09:31] ANSI_COLOR="0;31"
[2025-04-13 21:09:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-13 21:09:31] HOME_URL="https://www.centos.org/"
[2025-04-13 21:09:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-13 21:09:31] 
[2025-04-13 21:09:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-13 21:09:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-13 21:09:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-13 21:09:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-13 21:09:31] 
[2025-04-13 21:09:31] 2025-04-14 01:09:18,242 | INFO     | **************************************
[2025-04-13 21:09:31] 2025-04-14 01:09:18,746 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-04-13 21:09:31] 2025-04-14 01:09:19,068 | INFO     | sufficient remaining disk space (93840211968 B)
[2025-04-13 21:09:31] 2025-04-14 01:09:19,069 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-13 21:09:31] 2025-04-14 01:09:19,069 | INFO     | current server update state: UPDATING_FINAL
[2025-04-13 21:09:31] 2025-04-14 01:09:19,070 | INFO     | update_server=False
[2025-04-13 21:09:31] 2025-04-14 01:09:19,070 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-13 21:09:31] 2025-04-14 01:09:19,070 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-13 21:09:31] 2025-04-14 01:09:19,074 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-13 21:09:31] 2025-04-14 01:09:19,432 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-13 21:09:31] 2025-04-14 01:09:19,432 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-13 21:09:31] 2025-04-14 01:09:19,432 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-13 21:09:31] 2025-04-14 01:09:19,433 | INFO     | will abort loop
[2025-04-13 21:09:31] 2025-04-14 01:09:19,445 | INFO     | all job control threads have been joined
[2025-04-13 21:09:31] 2025-04-14 01:09:19,620 | INFO     | all payload control threads have been joined
[2025-04-13 21:09:31] 2025-04-14 01:09:19,772 | INFO     | all data control threads have been joined
[2025-04-13 21:09:31] 2025-04-14 01:09:20,111 | INFO     | [job] retrieve thread has finished
[2025-04-13 21:09:31] 2025-04-14 01:09:20,439 | INFO     | [job] job monitor thread has finished
[2025-04-13 21:09:31] 2025-04-14 01:09:20,479 | INFO     | [job] control thread has finished
[2025-04-13 21:09:31] 2025-04-14 01:09:20,480 | INFO     | [payload] execute_payloads thread has finished
[2025-04-13 21:09:31] 2025-04-14 01:09:20,634 | INFO     | [payload] control thread has finished
[2025-04-13 21:09:31] 2025-04-14 01:09:20,799 | INFO     | [payload] failed_post thread has finished
[2025-04-13 21:09:31] 2025-04-14 01:09:20,848 | INFO     | [data] control thread has finished
[2025-04-13 21:09:31] 2025-04-14 01:09:20,950 | INFO     | PID=3675468 has CPU usage=11.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-04-13 21:09:31] 2025-04-14 01:09:20,950 | INFO     | .. there are 25 such processes running
[2025-04-13 21:09:31] 2025-04-14 01:09:20,951 | INFO     | found 0 job(s) in 20 queues
[2025-04-13 21:09:31] 2025-04-14 01:09:20,951 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-13 21:09:31] 2025-04-14 01:09:20,951 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-13 21:09:31] 2025-04-14 01:09:20,951 | INFO     | [job] validate thread has finished
[2025-04-13 21:09:31] 2025-04-14 01:09:21,051 | INFO     | [data] copytool_in thread has finished
[2025-04-13 21:09:31] 2025-04-14 01:09:21,070 | INFO     | [job] create_data_payload thread has finished
[2025-04-13 21:09:31] 2025-04-14 01:09:21,100 | INFO     | [data] copytool_out thread has finished
[2025-04-13 21:09:31] 2025-04-14 01:09:21,348 | INFO     | [payload] validate_pre thread has finished
[2025-04-13 21:09:31] 2025-04-14 01:09:21,442 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-13 21:09:31] 2025-04-14 01:09:21,547 | INFO     | [payload] validate_post thread has finished
[2025-04-13 21:09:31] 2025-04-14 01:09:21,627 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-13 21:09:31] 2025-04-14 01:09:22,633 | INFO     | [job] queue monitor thread has finished
[2025-04-13 21:09:31] 2025-04-14 01:09:23,119 | INFO     | [data] queue_monitor thread has finished
[2025-04-13 21:09:31] 2025-04-14 01:09:24,659 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140050427287360)>', '<ExcThread(monitor, started 140049932863232)>']
[2025-04-13 21:09:31] 2025-04-14 01:09:24,982 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-13 21:09:31] 2025-04-14 01:09:24,982 | INFO     | [monitor] control thread has ended
[2025-04-13 21:09:31] 2025-04-14 01:09:29,686 | INFO     | all workflow threads have been joined
[2025-04-13 21:09:31] 2025-04-14 01:09:29,686 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-13 21:09:31] 2025-04-14 01:09:29,687 | INFO     | traces error code: 0
[2025-04-13 21:09:31] 2025-04-14 01:09:29,687 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-13 21:09:31] 2025-04-14 01:09:30,176 [wrapper] ==== pilot stdout END ====
[2025-04-13 21:09:31] 2025-04-14 01:09:30,226 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-13 21:09:31] 2025-04-14 01:09:30,258 [wrapper] pilotpid: 3675468
[2025-04-13 21:09:31] 2025-04-14 01:09:30,296 [wrapper] Pilot exit status: 0
[2025-04-13 21:09:31] 2025-04-14 01:09:30,427 [wrapper] pandaids: 6601724574
[2025-04-13 21:09:31] 2025-04-14 01:09:30,651 [wrapper] cleanup supervisor_pilot  936791 3675470
[2025-04-13 21:09:31] 2025-04-14 01:09:30,676 [wrapper] Test setup, not cleaning
[2025-04-13 21:09:31] 2025-04-14 01:09:30,699 [wrapper] apfmon messages muted
[2025-04-13 21:09:31] 2025-04-14 01:09:30,742 [wrapper] ==== wrapper stdout END ====
[2025-04-13 21:09:31] 2025-04-14 01:09:30,776 [wrapper] ==== wrapper stderr END ====
[2025-04-13 21:09:31]  *** Error codes and diagnostics ***
[2025-04-13 21:09:31]     "exeErrorCode": 0,
[2025-04-13 21:09:31]     "exeErrorDiag": "",
[2025-04-13 21:09:31]     "pilotErrorCode": 0,
[2025-04-13 21:09:31]     "pilotErrorDiag": "",
[2025-04-13 21:09:31]  *** Listing of results directory ***
[2025-04-13 21:09:31] total 416628
[2025-04-13 21:09:31] -rw-r--r--. 1 boincer umatlas    495897 Apr 13 07:15 pilot3.tar.gz
[2025-04-13 21:09:31] -rw-r--r--. 1 boincer umatlas      5111 Apr 13 07:26 queuedata.json
[2025-04-13 21:09:31] -rwx------. 1 boincer umatlas     37140 Apr 13 07:26 runpilot2-wrapper.sh
[2025-04-13 21:09:31] -rw-r--r--. 1 boincer umatlas       100 Apr 13 13:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-13 21:09:31] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 13 13:59 run_atlas
[2025-04-13 21:09:31] -rw-r--r--. 1 boincer umatlas       105 Apr 13 13:59 job.xml
[2025-04-13 21:09:31] -rw-r--r--. 2 boincer umatlas 220274104 Apr 13 13:59 EVNT.44075162._001370.pool.root.1
[2025-04-13 21:09:31] -rw-r--r--. 2 boincer umatlas     17569 Apr 13 13:59 start_atlas.sh
[2025-04-13 21:09:31] drwxrwx--x. 2 boincer umatlas      4096 Apr 13 13:59 shared
[2025-04-13 21:09:31] -rw-r--r--. 2 boincer umatlas    508887 Apr 13 13:59 input.tar.gz
[2025-04-13 21:09:31] -rw-r--r--. 1 boincer umatlas         0 Apr 13 13:59 boinc_lockfile
[2025-04-13 21:09:31] -rw-r--r--. 1 boincer umatlas      2549 Apr 13 13:59 pandaJob.out
[2025-04-13 21:09:31] -rw-------. 1 boincer umatlas       467 Apr 13 13:59 setup.sh.local
[2025-04-13 21:09:31] -rw-------. 1 boincer umatlas    985764 Apr 13 14:00 agis_schedconf.cvmfs.json
[2025-04-13 21:09:31] drwx------. 4 boincer umatlas      4096 Apr 13 14:00 pilot3
[2025-04-13 21:09:31] -rw-r--r--. 1 boincer umatlas      6859 Apr 13 21:01 init_data.xml
[2025-04-13 21:09:31] -rw-------. 1 boincer umatlas 198046688 Apr 13 21:07 HITS.44075164._056481.pool.root.1
[2025-04-13 21:09:31] -rw-r--r--. 1 boincer umatlas       532 Apr 13 21:07 boinc_task_state.xml
[2025-04-13 21:09:31] -rw-------. 1 boincer umatlas      1054 Apr 13 21:08 memory_monitor_summary.json
[2025-04-13 21:09:31] -rw-------. 1 boincer umatlas        95 Apr 13 21:08 pilot_heartbeat.json
[2025-04-13 21:09:31] -rw-------. 1 boincer umatlas   1603529 Apr 13 21:08 agis_ddmendpoints.agis.ALL.json
[2025-04-13 21:09:31] -rw-------. 1 boincer umatlas    464786 Apr 13 21:08 log.44075164._056481.job.log.tgz.1
[2025-04-13 21:09:31] -rw-------. 1 boincer umatlas      7751 Apr 13 21:09 heartbeat.json
[2025-04-13 21:09:31] -rw-r--r--. 1 boincer umatlas        29 Apr 13 21:09 wrapper_checkpoint.txt
[2025-04-13 21:09:31] -rw-r--r--. 1 boincer umatlas      8192 Apr 13 21:09 boinc_mmap_file
[2025-04-13 21:09:31] -rw-------. 1 boincer umatlas      4935 Apr 13 21:09 pilotlog.txt
[2025-04-13 21:09:31] -rw-------. 1 boincer umatlas   1766823 Apr 13 21:09 log.44075164._056481.job.log.1
[2025-04-13 21:09:31] -rw-------. 1 boincer umatlas       357 Apr 13 21:09 output.list
[2025-04-13 21:09:31] -rw-r--r--. 1 boincer umatlas       620 Apr 13 21:09 runtime_log
[2025-04-13 21:09:31] -rw-------. 1 boincer umatlas   2252800 Apr 13 21:09 result.tar.gz
[2025-04-13 21:09:31] -rw-------. 1 boincer umatlas       665 Apr 13 21:09 Vi7NDmNfAO7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmINzKDmTQTOIn.diag
[2025-04-13 21:09:31] -rw-r--r--. 1 boincer umatlas     11429 Apr 13 21:09 runtime_log.err
[2025-04-13 21:09:31] -rw-r--r--. 1 boincer umatlas     21253 Apr 13 21:09 stderr.txt
[2025-04-13 21:09:31] HITS file was successfully produced:
[2025-04-13 21:09:31] -rw-------. 1 boincer umatlas 198046688 Apr 13 21:07 shared/HITS.pool.root.1
[2025-04-13 21:09:31]  *** Contents of shared directory: ***
[2025-04-13 21:09:31] total 411244
[2025-04-13 21:09:31] -rw-r--r--. 2 boincer umatlas 220274104 Apr 13 13:59 ATLAS.root_0
[2025-04-13 21:09:31] -rw-r--r--. 2 boincer umatlas     17569 Apr 13 13:59 start_atlas.sh
[2025-04-13 21:09:31] -rw-r--r--. 2 boincer umatlas    508887 Apr 13 13:59 input.tar.gz
[2025-04-13 21:09:31] -rw-------. 1 boincer umatlas 198046688 Apr 13 21:07 HITS.pool.root.1
[2025-04-13 21:09:31] -rw-------. 1 boincer umatlas   2252800 Apr 13 21:09 result.tar.gz
21:09:33 (3669135): run_atlas exited; CPU time 113673.472288
21:09:33 (3669135): called boinc_finish(0)

</stderr_txt>
]]>

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