Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-14 06:08:57 (9388): Detected: vboxwrapper 26206
2025-04-14 06:08:57 (9388): Detected: BOINC client v8.0.4
2025-04-14 06:08:57 (9388): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-14 06:08:58 (9388): Successfully copied 'init_data.xml' to the shared directory.
2025-04-14 06:08:59 (9388): Create VM. (boinc_ba1574b175c7769d, slot#15)
2025-04-14 06:08:59 (9388): Setting Memory Size for VM. (4400MB)
2025-04-14 06:08:59 (9388): Setting CPU Count for VM. (4)
2025-04-14 06:09:00 (9388): Setting Chipset Options for VM.
2025-04-14 06:09:00 (9388): Setting Graphics Controller Options for VM.
2025-04-14 06:09:00 (9388): Setting Boot Options for VM.
2025-04-14 06:09:00 (9388): Setting Network Configuration for NAT.
2025-04-14 06:09:01 (9388): Enabling VM Network Access.
2025-04-14 06:09:01 (9388): Disabling USB Support for VM.
2025-04-14 06:09:01 (9388): Disabling COM Port Support for VM.
2025-04-14 06:09:01 (9388): Disabling LPT Port Support for VM.
2025-04-14 06:09:02 (9388): Disabling Audio Support for VM.
2025-04-14 06:09:02 (9388): Disabling Clipboard Support for VM.
2025-04-14 06:09:02 (9388): Disabling Drag and Drop Support for VM.
2025-04-14 06:09:02 (9388): Adding storage controller(s) to VM.
2025-04-14 06:09:03 (9388): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-14 06:09:03 (9388): Adding VirtualBox Guest Additions to VM.
2025-04-14 06:09:03 (9388): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-14 06:09:04 (9388): forwarding host port 56498 to guest port 80
2025-04-14 06:09:04 (9388): Enabling remote desktop for VM.
2025-04-14 06:09:04 (9388): Enabling shared directory for VM.
2025-04-14 06:09:05 (9388): Starting VM using VBoxManage interface. (boinc_ba1574b175c7769d, slot#15)
2025-04-14 06:09:12 (9388): Successfully started VM. (PID = '17720')
2025-04-14 06:09:12 (9388): Reporting VM Process ID to BOINC.
2025-04-14 06:09:12 (9388): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-14 06:09:12 (9388): Guest Log: CPUID EDX: 0x178bfbff
2025-04-14 06:09:12 (9388): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-14 06:09:12 (9388): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-14 06:09:12 (9388): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-14 06:09:12 (9388): Detected: Web Application Enabled (http://localhost:56498)
2025-04-14 06:09:12 (9388): Detected: Remote Desktop Enabled (localhost:56500)
2025-04-14 06:09:12 (9388): Preference change detected
2025-04-14 06:09:12 (9388): Setting CPU throttle for VM. (100%)
2025-04-14 06:09:12 (9388): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-14 06:09:14 (9388): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-14 06:09:14 (9388): Guest Log: BIOS: Booting from Hard Disk...
2025-04-14 06:09:17 (9388): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-14 06:09:17 (9388): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-14 06:09:17 (9388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-14 06:09:24 (9388): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-14 06:09:24 (9388): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-14 06:09:32 (9388): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-14 06:09:32 (9388): Guest Log: 00:00:00.000135 main     Log opened 2025-04-14T06:09:30.592062000Z
2025-04-14 06:09:32 (9388): Guest Log: 00:00:00.000221 main     OS Product: Linux
2025-04-14 06:09:32 (9388): Guest Log: 00:00:00.000241 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-14 06:09:32 (9388): Guest Log: 00:00:00.000257 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-14 06:09:32 (9388): Guest Log: 00:00:00.000274 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-14 06:09:32 (9388): Guest Log: 00:00:00.000275 main     Process ID: 1313
2025-04-14 06:09:32 (9388): Guest Log: 00:00:00.000381 main     Package type: LINUX_64BITS_GENERIC
2025-04-14 06:09:32 (9388): Guest Log: 00:00:00.001002 main     5.2.32 r132073 started. Verbose level = 0
2025-04-14 06:09:32 (9388): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-14 06:09:32 (9388): Guest Log: [INFO] Mounting shared directory
2025-04-14 06:09:32 (9388): Guest Log: [INFO] Checking for init_data.xml
2025-04-14 06:09:34 (9388): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-14 06:09:34 (9388): Guest Log: [INFO] Detected branch: prod
2025-04-14 06:09:35 (9388): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-14 06:09:35 (9388): Guest Log: Copying input files
2025-04-14 06:09:36 (9388): Guest Log: Copied input files into RunAtlas.
2025-04-14 06:09:36 (9388): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-14 06:09:36 (9388): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-14 06:09:36 (9388): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-14 06:09:36 (9388): Guest Log: Further information can be found at the LHC@home message board.
2025-04-14 06:09:42 (9388): Guest Log: 00:00:10.003345 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 685 794 000ns (GuestNow=1 744 600 181 907 959 000 ns GuestLast=1 744 610 970 593 753 000 ns fSetTimeLastLoop=true )
2025-04-14 06:09:56 (9388): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-14 06:09:56 (9388): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-14 06:09:56 (9388): Guest Log: 2.6.3.0 1588 0 30168 144833 4 1 3117322 4096000 0 65024 0 0 n/a 1 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-14 06:09:57 (9388): Guest Log: copied the webapp to /var/www
2025-04-14 06:09:57 (9388): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-14 06:09:57 (9388): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-14 06:09:57 (9388): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-14 06:09:57 (9388): Guest Log:  *** Starting ATLAS job. (PandaID=6600698774 taskID=44075164) ***
2025-04-14 07:49:24 (9388): Status Report: Elapsed Time: '6000.000000'
2025-04-14 07:49:24 (9388): Status Report: CPU Time: '19407.375000'
2025-04-14 08:00:04 (9388): VM state change detected. (old = 'running', new = 'paused')
2025-04-14 10:00:03 (9388): VM state change detected. (old = 'paused', new = 'running')
2025-04-14 10:00:07 (9388): Guest Log: 01:50:32.398239 timesync vgsvcTimeSyncWorker: Radical host time change: 7 207 853 000 000ns (HostNow=1 744 613 995 830 000 000 ns HostLast=1 744 606 787 977 000 000 ns)
2025-04-14 10:00:17 (9388): Guest Log: 01:50:42.401422 timesync vgsvcTimeSyncWorker: Radical guest time change: 7 201 530 355 000ns (GuestNow=1 744 614 005 833 236 000 ns GuestLast=1 744 606 804 302 881 000 ns fSetTimeLastLoop=true )
2025-04-14 10:30:03 (9388): Guest Log:  *** Job finished ***
2025-04-14 10:30:03 (9388): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-14 10:30:03 (9388): Guest Log: 2025-04-14 07:29:37,214 | INFO     | [data] queue_monitor thread has finished
2025-04-14 10:30:03 (9388): Guest Log: 2025-04-14 07:29:43,652 | INFO     | job.realtimelogging is not enabled
2025-04-14 10:30:03 (9388): Guest Log: 2025-04-14 07:29:44,654 | INFO     | [payload] run_realtimelog thread has finished
2025-04-14 10:30:03 (9388): Guest Log: 2025-04-14 07:29:45,998 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139848075638592)>', '<ExcThread(monitor, started 139847373133568)>']
2025-04-14 10:30:03 (9388): Guest Log: 2025-04-14 07:29:46,787 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-14 10:30:03 (9388): Guest Log: 2025-04-14 07:29:46,787 | INFO     | [monitor] control thread has ended
2025-04-14 10:30:03 (9388): Guest Log: 2025-04-14 07:29:51,044 | INFO     | all workflow threads have been joined
2025-04-14 10:30:03 (9388): Guest Log: 2025-04-14 07:29:51,045 | INFO     | end of generic workflow (traces error code: 0)
2025-04-14 10:30:03 (9388): Guest Log: 2025-04-14 07:29:51,045 | INFO     | traces error code: 0
2025-04-14 10:30:03 (9388): Guest Log: 2025-04-14 07:29:51,045 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-14 10:30:03 (9388): Guest Log: 2025-04-14 07:29:51,127 [wrapper] ==== pilot stdout END ====
2025-04-14 10:30:03 (9388): Guest Log: 2025-04-14 07:29:51,140 [wrapper] ==== wrapper stdout RESUME ====
2025-04-14 10:30:03 (9388): Guest Log: 2025-04-14 07:29:51,153 [wrapper] pilotpid: 5911
2025-04-14 10:30:03 (9388): Guest Log: 2025-04-14 07:29:51,159 [wrapper] Pilot exit status: 0
2025-04-14 10:30:03 (9388): Guest Log: 2025-04-14 07:29:51,280 [wrapper] pandaids: 6600698774
2025-04-14 10:30:03 (9388): Guest Log: 2025-04-14 07:29:51,312 [wrapper] cleanup supervisor_pilot  6168 5912
2025-04-14 10:30:03 (9388): Guest Log: 2025-04-14 07:29:51,320 [wrapper] Test setup, not cleaning
2025-04-14 10:30:03 (9388): Guest Log: 2025-04-14 07:29:51,326 [wrapper] apfmon messages muted
2025-04-14 10:30:03 (9388): Guest Log: 2025-04-14 07:29:51,333 [wrapper] ==== wrapper stdout END ====
2025-04-14 10:30:03 (9388): Guest Log: 2025-04-14 07:29:51,340 [wrapper] ==== wrapper stderr END ====
2025-04-14 10:30:03 (9388): Guest Log:  *** Error codes and diagnostics ***
2025-04-14 10:30:03 (9388): Guest Log:     "exeErrorCode": 0,
2025-04-14 10:30:03 (9388): Guest Log:     "exeErrorDiag": "",
2025-04-14 10:30:03 (9388): Guest Log:     "pilotErrorCode": 0,
2025-04-14 10:30:03 (9388): Guest Log:     "pilotErrorDiag": "",
2025-04-14 10:30:03 (9388): Guest Log:  *** Listing of results directory ***
2025-04-14 10:30:03 (9388): Guest Log: total 191404
2025-04-14 10:30:03 (9388): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 13 05:05 pilot3.tar.gz
2025-04-14 10:30:03 (9388): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 13 05:16 queuedata.json
2025-04-14 10:30:03 (9388): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 13 05:17 runpilot2-wrapper.sh
2025-04-14 10:30:03 (9388): Guest Log: -rwxr-xr-x. 1 atlas atlas      9184 Apr 14 03:09 init_data.xml
2025-04-14 10:30:03 (9388): Guest Log: -rwxr-xr-x. 1 atlas atlas    508880 Apr 14 03:09 input.tar.gz
2025-04-14 10:30:03 (9388): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 14 03:09 start_atlas.sh
2025-04-14 10:30:03 (9388): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 14 03:09 EVNT.44075162._002105.pool.root.1 -> /data/./ATLAS.root_0
2025-04-14 10:30:03 (9388): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Apr 14 03:09 pandaJob.out
2025-04-14 10:30:03 (9388): Guest Log: -rw-------. 1 atlas atlas       424 Apr 14 03:10 setup.sh.local
2025-04-14 10:30:03 (9388): Guest Log: -rw-------. 1 atlas atlas    985912 Apr 14 03:10 agis_schedconf.cvmfs.json
2025-04-14 10:30:03 (9388): Guest Log: drwx------. 4 atlas atlas      4096 Apr 14 03:10 pilot3
2025-04-14 10:30:03 (9388): Guest Log: -rw-------. 1 atlas atlas 190220365 Apr 14 07:28 HITS.44075164._053589.pool.root.1
2025-04-14 10:30:03 (9388): Guest Log: -rw-------. 1 atlas atlas        97 Apr 14 07:29 pilot_heartbeat.json
2025-04-14 10:30:03 (9388): Guest Log: -rw-------. 1 atlas atlas      1038 Apr 14 07:29 memory_monitor_summary.json
2025-04-14 10:30:03 (9388): Guest Log: -rw-------. 1 atlas atlas   1603529 Apr 14 07:29 agis_ddmendpoints.agis.ALL.json
2025-04-14 10:30:03 (9388): Guest Log: -rw-------. 1 atlas atlas    265803 Apr 14 07:29 log.44075164._053589.job.log.tgz.1
2025-04-14 10:30:03 (9388): Guest Log: -rw-------. 1 atlas atlas      7705 Apr 14 07:29 heartbeat.json
2025-04-14 10:30:03 (9388): Guest Log: -rw-------. 1 atlas atlas      4671 Apr 14 07:29 pilotlog.txt
2025-04-14 10:30:03 (9388): Guest Log: -rw-------. 1 atlas atlas    736244 Apr 14 07:29 log.44075164._053589.job.log.1
2025-04-14 10:30:03 (9388): Guest Log: -rw-------. 1 atlas atlas       357 Apr 14 07:29 output.list
2025-04-14 10:30:03 (9388): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 14 07:29 runtime_log
2025-04-14 10:30:03 (9388): Guest Log: -rw-------. 1 atlas atlas   1024000 Apr 14 07:29 result.tar.gz
2025-04-14 10:30:03 (9388): Guest Log: -rw-r--r--. 1 atlas atlas     10914 Apr 14 07:29 runtime_log.err
2025-04-14 10:30:03 (9388): Guest Log: -rw-------. 1 atlas atlas       650 Apr 14 07:29 GGKLDmqt4N7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmw9SLDmbg940m.diag
2025-04-14 10:30:03 (9388): Guest Log: Looking for outputfile HITS.44075164._053589.pool.root.1
2025-04-14 10:30:03 (9388): Guest Log: HITS file was successfully produced
2025-04-14 10:30:03 (9388): Guest Log: -rw-------. 1 atlas atlas 190220365 Apr 14 07:28 /home/atlas/RunAtlas/HITS.44075164._053589.pool.root.1
2025-04-14 10:30:04 (9388): Guest Log: Successfully finished the ATLAS job!
2025-04-14 10:30:04 (9388): Guest Log: Copying the results back to the shared directory!
2025-04-14 10:30:04 (9388): Guest Log:  *** Contents of shared directory: ***
2025-04-14 10:30:04 (9388): Guest Log: total 406300
2025-04-14 10:30:04 (9388): Guest Log: -rwxrwxrwx. 1 root root 224259969 Apr 14 03:08 ATLAS.root_0
2025-04-14 10:30:04 (9388): Guest Log: -rwxrwxrwx. 1 root root 190220365 Apr 14  2025 HITS.pool.root.1
2025-04-14 10:30:04 (9388): Guest Log: -rwxrwxrwx. 1 root root      9184 Apr 14 03:08 init_data.xml
2025-04-14 10:30:04 (9388): Guest Log: -rwxrwxrwx. 1 root root    508880 Apr 13 16:21 input.tar.gz
2025-04-14 10:30:04 (9388): Guest Log: -rwxrwxrwx. 1 root root   1024000 Apr 14  2025 result.tar.gz
2025-04-14 10:30:04 (9388): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 13 16:21 start_atlas.sh
2025-04-14 10:30:04 (9388): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-14 10:30:04 (9388): VM Completion File Detected.
2025-04-14 10:30:04 (9388): Powering off VM.
2025-04-14 10:30:06 (9388): Successfully stopped VM.
2025-04-14 10:30:06 (9388): Deregistering VM. (boinc_ba1574b175c7769d, slot#15)
2025-04-14 10:30:06 (9388): Removing network bandwidth throttle group from VM.
2025-04-14 10:30:06 (9388): Removing VM from VirtualBox.
10:30:11 (9388): called boinc_finish(0)

</stderr_txt>
]]>

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