Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:33:48 (45365): wrapper (7.7.26015): starting
11:33:48 (45365): wrapper: running run_atlas (--nthreads 8)
[2025-04-13 11:33:48] Arguments: --nthreads 8
[2025-04-13 11:33:48] Threads: 8
[2025-04-13 11:33:48] Checking for CVMFS
[2025-04-13 11:33:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-13 11:33:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-13 11:33:52] Running cvmfs_config stat atlas.cern.ch
[2025-04-13 11:33:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-13 11:33:54] 2.11.2.0 44558 34036 379800 144816 0 277 18077355 18432001 13318 130560 0 141723422 98.959 336561722 36589 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-13 11:33:54] CVMFS is ok
[2025-04-13 11:33:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-13 11:33:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-13 11:33:54] Further information can be found at the LHC@home message board.
[2025-04-13 11:33:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-13 11:33:54] Checking for apptainer binary...
[2025-04-13 11:33:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-13 11:33:54] Running /usr/bin/apptainer --version
[2025-04-13 11:33:54] apptainer version 1.3.2-1.el7
[2025-04-13 11:33:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-13 11:34:43] c-211-12.aglt2.org
[2025-04-13 11:34:43] apptainer works
[2025-04-13 11:34:43] Set ATHENA_PROC_NUMBER=8
[2025-04-13 11:34:43] Set ATHENA_CORE_NUMBER=8
[2025-04-13 11:34:44] Starting ATLAS job with PandaID=6601726362
[2025-04-13 11:34:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-14 09:55:06]  *** The last 200 lines of the pilot log: ***
[2025-04-14 09:55:06] 2025-04-14 13:54:22,357 | INFO     | monitor loop #3310: job 0:6601726362 is in state 'finished'
[2025-04-14 09:55:06] 2025-04-14 13:54:22,372 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-14 09:55:06] 2025-04-14 13:54:24,905 | INFO     | monitor loop #3311: job 0:6601726362 is in state 'finished'
[2025-04-14 09:55:06] 2025-04-14 13:54:24,905 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-14 09:55:06] 2025-04-14 13:54:27,418 | INFO     | monitor loop #3312: job 0:6601726362 is in state 'finished'
[2025-04-14 09:55:06] 2025-04-14 13:54:27,438 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-14 09:55:06] 2025-04-14 13:54:29,972 | INFO     | monitor loop #3313: job 0:6601726362 is in state 'finished'
[2025-04-14 09:55:06] 2025-04-14 13:54:29,973 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-14 09:55:06] 2025-04-14 13:54:31,889 | INFO     | PID=12677 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-14 09:55:06] 2025-04-14 13:54:31,890 | INFO     | .. there are 51 such processes running
[2025-04-14 09:55:06] 2025-04-14 13:54:32,497 | INFO     | monitor loop #3314: job 0:6601726362 is in state 'finished'
[2025-04-14 09:55:06] 2025-04-14 13:54:32,512 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-14 09:55:06] 2025-04-14 13:54:35,020 | INFO     | monitor loop #3315: job 0:6601726362 is in state 'finished'
[2025-04-14 09:55:06] 2025-04-14 13:54:35,020 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-14 09:55:06] 2025-04-14 13:54:36,352 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-14 09:55:06] 2025-04-14 13:54:36,353 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6601726362/memory_monitor_summary.json (trf name=prmon)
[2025-04-14 09:55:06] 2025-04-14 13:54:36,353 | INFO     | extracted standard info from prmon json
[2025-04-14 09:55:06] 2025-04-14 13:54:36,354 | INFO     | extracted standard memory fields from prmon json
[2025-04-14 09:55:06] 2025-04-14 13:54:36,354 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-14 09:55:06] 2025-04-14 13:54:36,354 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-14 09:55:06] 2025-04-14 13:54:36,354 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-14 09:55:06] 2025-04-14 13:54:36,878 | INFO     | fitting pss+swap vs Time
[2025-04-14 09:55:06] 2025-04-14 13:54:36,963 | INFO     | sum of square deviations: 687565466126.9818
[2025-04-14 09:55:06] 2025-04-14 13:54:37,578 | INFO     | monitor loop #3316: job 0:6601726362 is in state 'finished'
[2025-04-14 09:55:06] 2025-04-14 13:54:37,850 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-14 09:55:06] 2025-04-14 13:54:37,688 | INFO     | sum of deviations: 3221081239700.936
[2025-04-14 09:55:06] 2025-04-14 13:54:37,850 | INFO     | mean x: 1744598960.7300613
[2025-04-14 09:55:06] 2025-04-14 13:54:37,851 | INFO     | mean y: 2407839.2668711655
[2025-04-14 09:55:06] 2025-04-14 13:54:37,851 | INFO     | -- intersect: -8170624780.977502
[2025-04-14 09:55:06] 2025-04-14 13:54:37,851 | INFO     | intersect: -8170624780.977502
[2025-04-14 09:55:06] 2025-04-14 13:54:37,853 | INFO     | chi2: 26.231866646621945
[2025-04-14 09:55:06] 2025-04-14 13:54:37,900 | INFO     | sum of square deviations: 679687184359.3872
[2025-04-14 09:55:06] 2025-04-14 13:54:38,335 | INFO     | sum of deviations: 3649008573193.607
[2025-04-14 09:55:06] 2025-04-14 13:54:38,335 | INFO     | mean x: 1744598808.234796
[2025-04-14 09:55:06] 2025-04-14 13:54:38,336 | INFO     | mean y: 2416122.4734411086
[2025-04-14 09:55:06] 2025-04-14 13:54:38,336 | INFO     | -- intersect: -9363739595.222193
[2025-04-14 09:55:06] 2025-04-14 13:54:38,336 | INFO     | intersect: -9363739595.222193
[2025-04-14 09:55:06] 2025-04-14 13:54:38,366 | INFO     | chi2: 22.289697463055237
[2025-04-14 09:55:06] 2025-04-14 13:54:38,366 | INFO     | current chi2=22.289697463055237 (change=15.028168740993383 %)
[2025-04-14 09:55:06] 2025-04-14 13:54:38,366 | INFO     | right removable region: 1298
[2025-04-14 09:55:06] 2025-04-14 13:54:38,405 | INFO     | sum of square deviations: 679686205919.387
[2025-04-14 09:55:06] 2025-04-14 13:54:38,869 | INFO     | sum of deviations: 2759595262952.346
[2025-04-14 09:55:06] 2025-04-14 13:54:38,869 | INFO     | mean x: 1744599113.234796
[2025-04-14 09:55:06] 2025-04-14 13:54:38,869 | INFO     | mean y: 2416770.713625866
[2025-04-14 09:55:06] 2025-04-14 13:54:38,869 | INFO     | -- intersect: -7080833421.367821
[2025-04-14 09:55:06] 2025-04-14 13:54:38,869 | INFO     | intersect: -7080833421.367821
[2025-04-14 09:55:06] 2025-04-14 13:54:38,890 | INFO     | chi2: 21.230554706688807
[2025-04-14 09:55:06] 2025-04-14 13:54:38,891 | INFO     | current chi2=21.230554706688807 (change=19.065787453510065 %)
[2025-04-14 09:55:06] 2025-04-14 13:54:38,891 | INFO     | left removable region: 10
[2025-04-14 09:55:06] 2025-04-14 13:54:38,902 | INFO     | sum of square deviations: 662565357618.4723
[2025-04-14 09:55:06] 2025-04-14 13:54:39,340 | INFO     | sum of deviations: 2874066987787.9097
[2025-04-14 09:55:06] 2025-04-14 13:54:39,340 | INFO     | mean x: 1744599082.7453415
[2025-04-14 09:55:06] 2025-04-14 13:54:39,341 | INFO     | mean y: 2434794.23447205
[2025-04-14 09:55:06] 2025-04-14 13:54:39,341 | INFO     | -- intersect: -7565263355.071336
[2025-04-14 09:55:06] 2025-04-14 13:54:39,341 | INFO     | intersect: -7565263355.071336
[2025-04-14 09:55:06] 2025-04-14 13:54:39,343 | INFO     | chi2: 12.667438122504777
[2025-04-14 09:55:06] 2025-04-14 13:54:39,376 | INFO     | -- intersect: -7565263355.071336
[2025-04-14 09:55:06] 2025-04-14 13:54:39,377 | INFO     | current memory leak: 4.34 B/s (using 1288 data points, chi2=12.67)
[2025-04-14 09:55:06] 2025-04-14 13:54:39,390 | INFO     | ..............................
[2025-04-14 09:55:06] 2025-04-14 13:54:39,390 | INFO     | . Timing measurements:
[2025-04-14 09:55:06] 2025-04-14 13:54:39,413 | INFO     | . get job = 1 s
[2025-04-14 09:55:06] 2025-04-14 13:54:39,413 | INFO     | . initial setup = 18 s
[2025-04-14 09:55:06] 2025-04-14 13:54:39,413 | INFO     | . payload setup = 163 s
[2025-04-14 09:55:06] 2025-04-14 13:54:39,414 | INFO     | . stage-in = 3 s
[2025-04-14 09:55:06] 2025-04-14 13:54:39,414 | INFO     | . payload execution = 79682 s
[2025-04-14 09:55:06] 2025-04-14 13:54:39,414 | INFO     | . stage-out = 15 s
[2025-04-14 09:55:06] 2025-04-14 13:54:39,420 | INFO     | . log creation = 3 s
[2025-04-14 09:55:06] 2025-04-14 13:54:39,420 | INFO     | ..............................
[2025-04-14 09:55:06] 2025-04-14 13:54:40,558 | INFO     | 
[2025-04-14 09:55:06] 2025-04-14 13:54:40,558 | INFO     | job summary report
[2025-04-14 09:55:06] 2025-04-14 13:54:40,558 | INFO     | --------------------------------------------------
[2025-04-14 09:55:06] 2025-04-14 13:54:40,559 | INFO     | PanDA job id: 6601726362
[2025-04-14 09:55:06] 2025-04-14 13:54:40,559 | INFO     | task id: 44075483
[2025-04-14 09:55:06] 2025-04-14 13:54:40,559 | INFO     | errors: (none)
[2025-04-14 09:55:06] 2025-04-14 13:54:40,559 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-14 09:55:06] 2025-04-14 13:54:40,559 | INFO     | pilot state: finished 
[2025-04-14 09:55:06] 2025-04-14 13:54:40,559 | INFO     | transexitcode: 0
[2025-04-14 09:55:06] 2025-04-14 13:54:40,559 | INFO     | exeerrorcode: 0
[2025-04-14 09:55:06] 2025-04-14 13:54:40,559 | INFO     | exeerrordiag: 
[2025-04-14 09:55:06] 2025-04-14 13:54:40,559 | INFO     | exitcode: 0
[2025-04-14 09:55:06] 2025-04-14 13:54:40,560 | INFO     | exitmsg: OK
[2025-04-14 09:55:06] 2025-04-14 13:54:40,560 | INFO     | cpuconsumptiontime: 61124 s
[2025-04-14 09:55:06] 2025-04-14 13:54:40,560 | INFO     | nevents: 400
[2025-04-14 09:55:06] 2025-04-14 13:54:40,560 | INFO     | neventsw: 0
[2025-04-14 09:55:06] 2025-04-14 13:54:40,560 | INFO     | pid: 22362
[2025-04-14 09:55:06] 2025-04-14 13:54:40,560 | INFO     | pgrp: 22362
[2025-04-14 09:55:06] 2025-04-14 13:54:40,560 | INFO     | corecount: 8
[2025-04-14 09:55:06] 2025-04-14 13:54:40,560 | INFO     | event service: False
[2025-04-14 09:55:06] 2025-04-14 13:54:40,561 | INFO     | sizes: {0: 2416529, 1: 2417130, 2: 2417242, 3: 2417413, 4: 2417441, 15: 2417469, 27: 2417625, 38: 2417653, 51: 2417681, 63: 2417709, 76: 2417737, 88: 2418073, 93: 
[2025-04-14 09:55:06] 2025-04-14 13:54:40,561 | INFO     | --------------------------------------------------
[2025-04-14 09:55:06] 2025-04-14 13:54:40,561 | INFO     | 
[2025-04-14 09:55:06] 2025-04-14 13:54:40,576 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-14 09:55:06] 2025-04-14 13:54:41,275 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-14 09:55:06] 2025-04-14 13:54:41,276 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-14 09:55:06] 2025-04-14 13:54:41,276 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-14 09:55:06] 2025-04-14 13:54:41,276 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-14 09:55:06] 2025-04-14 13:54:41,276 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-14 09:55:06] 2025-04-14 13:54:41,276 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-14 09:55:06] 2025-04-14 13:54:41,276 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-14 09:55:06] 2025-04-14 13:54:41,277 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-14 09:55:06] 2025-04-14 13:54:41,277 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-14 09:55:06] 2025-04-14 13:54:41,277 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-14 09:55:06] 2025-04-14 13:54:41,277 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-14 09:55:06] 2025-04-14 13:54:41,277 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-14 09:55:06] 2025-04-14 13:54:41,277 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-14 09:55:06] 2025-04-14 13:54:41,277 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-14 09:55:06] 2025-04-14 13:54:41,278 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-14 09:55:06] 2025-04-14 13:54:41,278 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-14 09:55:06] 2025-04-14 13:54:41,278 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-14 09:55:06] 2025-04-14 13:54:41,278 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-14 09:55:06] 2025-04-14 13:54:41,293 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-14 09:55:06] 2025-04-14 13:54:41,294 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-14 09:55:06] 2025-04-14 13:54:41,294 | INFO     | job 6601726362 has completed (purged errors)
[2025-04-14 09:55:06] 2025-04-14 13:54:41,294 | INFO     | overall cleanup function is called
[2025-04-14 09:55:06] 2025-04-14 13:54:42,330 | INFO     | --- collectZombieJob: --- 10, [22362]
[2025-04-14 09:55:06] 2025-04-14 13:54:42,330 | INFO     | zombie collector waiting for pid 22362
[2025-04-14 09:55:06] 2025-04-14 13:54:42,330 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-14 09:55:06] 2025-04-14 13:54:42,331 | INFO     | collected zombie processes
[2025-04-14 09:55:06] 2025-04-14 13:54:42,331 | INFO     | will attempt to kill all subprocesses of pid=22362
[2025-04-14 09:55:06] 2025-04-14 13:54:46,413 | INFO     | process IDs to be killed: [22362] (in reverse order)
[2025-04-14 09:55:06] 2025-04-14 13:54:47,748 | WARNING  | found no corresponding commands to process id(s)
[2025-04-14 09:55:06] 2025-04-14 13:54:47,748 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-14 09:55:06] 2025-04-14 13:54:47,961 | INFO     | did not find any defunct processes belonging to 22362
[2025-04-14 09:55:06] 2025-04-14 13:54:48,184 | INFO     | did not find any defunct processes belonging to 22362
[2025-04-14 09:55:06] 2025-04-14 13:54:48,229 | INFO     | ready for new job
[2025-04-14 09:55:06] 2025-04-14 13:54:48,230 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-14 09:55:06] 2025-04-14 13:54:48,250 | INFO     | **************************************
[2025-04-14 09:55:06] 2025-04-14 13:54:48,250 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-14 09:55:06] 2025-04-14 13:54:48,250 | INFO     | **************************************
[2025-04-14 09:55:06] 2025-04-14 13:54:48,250 | INFO     | 
[2025-04-14 09:55:06] 2025-04-14 13:54:48,281 | INFO     | architecture information:
[2025-04-14 09:55:06] 2025-04-14 13:54:48,315 | INFO     | executing command: cat /etc/os-release
[2025-04-14 09:55:06] 2025-04-14 13:54:48,624 | INFO     | cat /etc/os-release:
[2025-04-14 09:55:06] NAME="CentOS Linux"
[2025-04-14 09:55:06] VERSION="7 (Core)"
[2025-04-14 09:55:06] ID="centos"
[2025-04-14 09:55:06] ID_LIKE="rhel fedora"
[2025-04-14 09:55:06] VERSION_ID="7"
[2025-04-14 09:55:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-14 09:55:06] ANSI_COLOR="0;31"
[2025-04-14 09:55:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-14 09:55:06] HOME_URL="https://www.centos.org/"
[2025-04-14 09:55:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-14 09:55:06] 
[2025-04-14 09:55:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-14 09:55:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-14 09:55:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-14 09:55:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-14 09:55:06] 
[2025-04-14 09:55:06] 2025-04-14 13:54:48,624 | INFO     | **************************************
[2025-04-14 09:55:06] 2025-04-14 13:54:49,127 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-14 09:55:06] 2025-04-14 13:54:49,261 | INFO     | sufficient remaining disk space (56669241344 B)
[2025-04-14 09:55:06] 2025-04-14 13:54:49,262 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-14 09:55:06] 2025-04-14 13:54:49,262 | INFO     | current server update state: UPDATING_FINAL
[2025-04-14 09:55:06] 2025-04-14 13:54:49,262 | INFO     | update_server=False
[2025-04-14 09:55:06] 2025-04-14 13:54:49,262 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-14 09:55:06] 2025-04-14 13:54:49,263 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-14 09:55:06] 2025-04-14 13:54:49,263 | INFO     | aborting loop
[2025-04-14 09:55:06] 2025-04-14 13:54:49,624 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-14 09:55:06] 2025-04-14 13:54:49,707 | INFO     | all payload control threads have been joined
[2025-04-14 09:55:06] 2025-04-14 13:54:49,716 | INFO     | all data control threads have been joined
[2025-04-14 09:55:06] 2025-04-14 13:54:50,121 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-14 09:55:06] 2025-04-14 13:54:50,211 | INFO     | found 0 job(s) in 20 queues
[2025-04-14 09:55:06] 2025-04-14 13:54:50,212 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-14 09:55:06] 2025-04-14 13:54:50,212 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-14 09:55:06] 2025-04-14 13:54:50,300 | INFO     | [job] retrieve thread has finished
[2025-04-14 09:55:06] 2025-04-14 13:54:50,309 | INFO     | [job] job monitor thread has finished
[2025-04-14 09:55:06] 2025-04-14 13:54:50,418 | INFO     | all job control threads have been joined
[2025-04-14 09:55:06] 2025-04-14 13:54:50,480 | INFO     | [payload] validate_post thread has finished
[2025-04-14 09:55:06] 2025-04-14 13:54:50,488 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-14 09:55:06] 2025-04-14 13:54:50,497 | INFO     | [payload] failed_post thread has finished
[2025-04-14 09:55:06] 2025-04-14 13:54:50,630 | INFO     | [job] queue monitor thread has finished
[2025-04-14 09:55:06] 2025-04-14 13:54:50,713 | INFO     | [payload] control thread has finished
[2025-04-14 09:55:06] 2025-04-14 13:54:50,721 | INFO     | [data] control thread has finished
[2025-04-14 09:55:06] 2025-04-14 13:54:51,424 | INFO     | [job] control thread has finished
[2025-04-14 09:55:06] 2025-04-14 13:54:51,714 | INFO     | [job] validate thread has finished
[2025-04-14 09:55:06] 2025-04-14 13:54:51,717 | INFO     | [data] copytool_in thread has finished
[2025-04-14 09:55:06] 2025-04-14 13:54:51,722 | INFO     | [payload] validate_pre thread has finished
[2025-04-14 09:55:06] 2025-04-14 13:54:51,730 | INFO     | [payload] execute_payloads thread has finished
[2025-04-14 09:55:06] 2025-04-14 13:54:51,740 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-14 09:55:06] 2025-04-14 13:54:51,749 | INFO     | [job] create_data_payload thread has finished
[2025-04-14 09:55:06] 2025-04-14 13:54:52,495 | INFO     | [data] copytool_out thread has finished
[2025-04-14 09:55:06] 2025-04-14 13:54:54,130 | INFO     | [data] queue_monitor thread has finished
[2025-04-14 09:55:06] 2025-04-14 13:54:56,125 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139684484540224)>', '<ExcThread(monitor, started 139684197947136)>']
[2025-04-14 09:55:06] 2025-04-14 13:54:56,247 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-14 09:55:06] 2025-04-14 13:54:56,247 | INFO     | [monitor] control thread has ended
[2025-04-14 09:55:06] 2025-04-14 13:55:01,151 | INFO     | all workflow threads have been joined
[2025-04-14 09:55:06] 2025-04-14 13:55:01,151 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-14 09:55:06] 2025-04-14 13:55:01,152 | INFO     | traces error code: 0
[2025-04-14 09:55:06] 2025-04-14 13:55:01,152 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-14 09:55:06] 2025-04-14 13:55:02,492 [wrapper] ==== pilot stdout END ====
[2025-04-14 09:55:06] 2025-04-14 13:55:02,533 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-14 09:55:06] 2025-04-14 13:55:02,585 [wrapper] pilotpid: 12677
[2025-04-14 09:55:06] 2025-04-14 13:55:02,600 [wrapper] Pilot exit status: 0
[2025-04-14 09:55:06] 2025-04-14 13:55:02,780 [wrapper] pandaids: 6601726362
[2025-04-14 09:55:06] 2025-04-14 13:55:04,041 [wrapper] cleanup supervisor_pilot 17045 12678
[2025-04-14 09:55:06] 2025-04-14 13:55:04,072 [wrapper] Test setup, not cleaning
[2025-04-14 09:55:06] 2025-04-14 13:55:04,112 [wrapper] apfmon messages muted
[2025-04-14 09:55:06] 2025-04-14 13:55:04,139 [wrapper] ==== wrapper stdout END ====
[2025-04-14 09:55:06] 2025-04-14 13:55:04,168 [wrapper] ==== wrapper stderr END ====
[2025-04-14 09:55:06]  *** Error codes and diagnostics ***
[2025-04-14 09:55:06]     "exeErrorCode": 0,
[2025-04-14 09:55:06]     "exeErrorDiag": "",
[2025-04-14 09:55:06]     "pilotErrorCode": 0,
[2025-04-14 09:55:06]     "pilotErrorDiag": "",
[2025-04-14 09:55:06]  *** Listing of results directory ***
[2025-04-14 09:55:06] total 423936
[2025-04-14 09:55:06] -rw-r--r-- 1 boincer umatlas    495897 Apr 13 08:15 pilot3.tar.gz
[2025-04-14 09:55:06] -rw-r--r-- 1 boincer umatlas      5111 Apr 13 08:25 queuedata.json
[2025-04-14 09:55:06] -rwx------ 1 boincer umatlas     37140 Apr 13 08:28 runpilot2-wrapper.sh
[2025-04-14 09:55:06] -rw-r--r-- 1 boincer umatlas       100 Apr 13 11:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-14 09:55:06] -rwxr-xr-x 1 boincer umatlas      7986 Apr 13 11:33 run_atlas
[2025-04-14 09:55:06] -rw-r--r-- 1 boincer umatlas       105 Apr 13 11:33 job.xml
[2025-04-14 09:55:06] -rw-r--r-- 2 boincer umatlas 226166663 Apr 13 11:33 EVNT.44075481._000171.pool.root.1
[2025-04-14 09:55:06] -rw-r--r-- 2 boincer umatlas     17569 Apr 13 11:33 start_atlas.sh
[2025-04-14 09:55:06] drwxrwx--x 2 boincer umatlas      4096 Apr 13 11:33 shared
[2025-04-14 09:55:06] -rw-r--r-- 2 boincer umatlas    508893 Apr 13 11:33 input.tar.gz
[2025-04-14 09:55:06] -rw-r--r-- 1 boincer umatlas         0 Apr 13 11:33 boinc_lockfile
[2025-04-14 09:55:06] -rw-r--r-- 1 boincer umatlas      2574 Apr 13 11:34 pandaJob.out
[2025-04-14 09:55:06] -rw------- 1 boincer umatlas       467 Apr 13 11:35 setup.sh.local
[2025-04-14 09:55:06] -rw------- 1 boincer umatlas    985764 Apr 13 11:38 agis_schedconf.cvmfs.json
[2025-04-14 09:55:06] drwx------ 4 boincer umatlas      4096 Apr 13 11:38 pilot3
[2025-04-14 09:55:06] -rw------- 1 boincer umatlas 192930781 Apr 14 09:45 HITS.44075483._004465.pool.root.1
[2025-04-14 09:55:06] -rw-r--r-- 1 boincer umatlas       531 Apr 14 09:46 boinc_task_state.xml
[2025-04-14 09:55:06] -rw-r--r-- 1 boincer umatlas      6134 Apr 14 09:47 init_data.xml
[2025-04-14 09:55:06] -rw------- 1 boincer umatlas      1058 Apr 14 09:52 memory_monitor_summary.json
[2025-04-14 09:55:06] -rw------- 1 boincer umatlas   1603529 Apr 14 09:52 agis_ddmendpoints.agis.ALL.json
[2025-04-14 09:55:06] -rw------- 1 boincer umatlas    820014 Apr 14 09:52 log.44075483._004465.job.log.tgz.1
[2025-04-14 09:55:06] -rw------- 1 boincer umatlas        95 Apr 14 09:54 pilot_heartbeat.json
[2025-04-14 09:55:06] -rw------- 1 boincer umatlas      7761 Apr 14 09:54 heartbeat.json
[2025-04-14 09:55:06] -rw-r--r-- 1 boincer umatlas      8192 Apr 14 09:54 boinc_mmap_file
[2025-04-14 09:55:06] -rw-r--r-- 1 boincer umatlas        28 Apr 14 09:54 wrapper_checkpoint.txt
[2025-04-14 09:55:06] -rw------- 1 boincer umatlas      4353 Apr 14 09:55 pilotlog.txt
[2025-04-14 09:55:06] -rw------- 1 boincer umatlas   4766766 Apr 14 09:55 log.44075483._004465.job.log.1
[2025-04-14 09:55:06] -rw------- 1 boincer umatlas       357 Apr 14 09:55 output.list
[2025-04-14 09:55:06] -rw-r--r-- 1 boincer umatlas       620 Apr 14 09:55 runtime_log
[2025-04-14 09:55:06] -rw------- 1 boincer umatlas   5601280 Apr 14 09:55 result.tar.gz
[2025-04-14 09:55:06] -rw-r--r-- 1 boincer umatlas     11419 Apr 14 09:55 runtime_log.err
[2025-04-14 09:55:06] -rw------- 1 boincer umatlas       664 Apr 14 09:55 N1vNDm3cBO7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmtPzKDmvxUMyn.diag
[2025-04-14 09:55:06] -rw-r--r-- 1 boincer umatlas     21532 Apr 14 09:55 stderr.txt
[2025-04-14 09:55:06] HITS file was successfully produced:
[2025-04-14 09:55:06] -rw------- 1 boincer umatlas 192930781 Apr 14 09:45 shared/HITS.pool.root.1
[2025-04-14 09:55:06]  *** Contents of shared directory: ***
[2025-04-14 09:55:06] total 415276
[2025-04-14 09:55:06] -rw-r--r-- 2 boincer umatlas 226166663 Apr 13 11:33 ATLAS.root_0
[2025-04-14 09:55:06] -rw-r--r-- 2 boincer umatlas     17569 Apr 13 11:33 start_atlas.sh
[2025-04-14 09:55:06] -rw-r--r-- 2 boincer umatlas    508893 Apr 13 11:33 input.tar.gz
[2025-04-14 09:55:06] -rw------- 1 boincer umatlas 192930781 Apr 14 09:45 HITS.pool.root.1
[2025-04-14 09:55:06] -rw------- 1 boincer umatlas   5601280 Apr 14 09:55 result.tar.gz
09:55:08 (45365): run_atlas exited; CPU time 64737.696456
09:55:08 (45365): called boinc_finish(0)

</stderr_txt>
]]>

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