Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-13 17:08:57 (19116): Detected: vboxwrapper 26206
2025-04-13 17:08:57 (19116): Detected: BOINC client v8.0.2
2025-04-13 17:08:58 (19116): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-13 17:08:58 (19116): Successfully copied 'init_data.xml' to the shared directory.
2025-04-13 17:08:59 (19116): Create VM. (boinc_1e9db3d41b65cf0d, slot#8)
2025-04-13 17:08:59 (19116): Setting Memory Size for VM. (4800MB)
2025-04-13 17:08:59 (19116): Setting CPU Count for VM. (8)
2025-04-13 17:09:00 (19116): Setting Chipset Options for VM.
2025-04-13 17:09:01 (19116): Setting Graphics Controller Options for VM.
2025-04-13 17:09:01 (19116): Setting Boot Options for VM.
2025-04-13 17:09:02 (19116): Setting Network Configuration for NAT.
2025-04-13 17:09:02 (19116): Enabling VM Network Access.
2025-04-13 17:09:03 (19116): Disabling USB Support for VM.
2025-04-13 17:09:04 (19116): Disabling COM Port Support for VM.
2025-04-13 17:09:04 (19116): Disabling LPT Port Support for VM.
2025-04-13 17:09:05 (19116): Disabling Audio Support for VM.
2025-04-13 17:09:06 (19116): Disabling Clipboard Support for VM.
2025-04-13 17:09:06 (19116): Disabling Drag and Drop Support for VM.
2025-04-13 17:09:06 (19116): Adding storage controller(s) to VM.
2025-04-13 17:09:08 (19116): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-13 17:09:10 (19116): Adding VirtualBox Guest Additions to VM.
2025-04-13 17:09:12 (19116): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-13 17:09:12 (19116): forwarding host port 53152 to guest port 80
2025-04-13 17:09:13 (19116): Enabling remote desktop for VM.
2025-04-13 17:09:13 (19116): Required extension pack not installed, remote desktop not enabled.
2025-04-13 17:09:13 (19116): Enabling shared directory for VM.
2025-04-13 17:09:13 (19116): Starting VM using VBoxManage interface. (boinc_1e9db3d41b65cf0d, slot#8)
2025-04-13 17:09:18 (19116): Successfully started VM. (PID = '26596')
2025-04-13 17:09:18 (19116): Reporting VM Process ID to BOINC.
2025-04-13 17:09:18 (19116): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-13 17:09:18 (19116): Guest Log: CPUID EDX: 0x178bfbff
2025-04-13 17:09:18 (19116): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-13 17:09:18 (19116): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-13 17:09:18 (19116): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-13 17:09:18 (19116): Detected: Web Application Enabled (http://localhost:53152)
2025-04-13 17:09:18 (19116): Preference change detected
2025-04-13 17:09:18 (19116): Setting CPU throttle for VM. (100%)
2025-04-13 17:09:18 (19116): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-13 17:09:20 (19116): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-13 17:09:20 (19116): Guest Log: BIOS: Booting from Hard Disk...
2025-04-13 17:09:23 (19116): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-13 17:09:23 (19116): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-13 17:09:23 (19116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-13 17:09:28 (19116): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-13 17:09:28 (19116): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-13 17:09:32 (19116): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-13 17:09:32 (19116): Guest Log: 00:00:00.000094 main     Log opened 2025-04-13T17:09:30.118913000Z
2025-04-13 17:09:32 (19116): Guest Log: 00:00:00.000163 main     OS Product: Linux
2025-04-13 17:09:32 (19116): Guest Log: 00:00:00.000256 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-13 17:09:32 (19116): Guest Log: 00:00:00.000290 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-13 17:09:32 (19116): Guest Log: 00:00:00.000315 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-13 17:09:32 (19116): Guest Log: 00:00:00.000316 main     Process ID: 1370
2025-04-13 17:09:32 (19116): Guest Log: 00:00:00.000317 main     Package type: LINUX_64BITS_GENERIC
2025-04-13 17:09:32 (19116): Guest Log: 00:00:00.001081 main     5.2.32 r132073 started. Verbose level = 0
2025-04-13 17:09:32 (19116): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-13 17:09:32 (19116): Guest Log: [INFO] Mounting shared directory
2025-04-13 17:09:32 (19116): Guest Log: [INFO] Checking for init_data.xml
2025-04-13 17:09:35 (19116): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-13 17:09:35 (19116): Guest Log: [INFO] Detected branch: prod
2025-04-13 17:09:35 (19116): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-13 17:09:35 (19116): Guest Log: Copying input files
2025-04-13 17:09:36 (19116): Guest Log: Copied input files into RunAtlas.
2025-04-13 17:09:36 (19116): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-13 17:09:36 (19116): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-13 17:09:36 (19116): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-13 17:09:36 (19116): Guest Log: Further information can be found at the LHC@home message board.
2025-04-13 17:09:42 (19116): Guest Log: 00:00:10.003351 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 205 933 000ns (GuestNow=1 744 553 381 915 098 000 ns GuestLast=1 744 564 170 121 031 000 ns fSetTimeLastLoop=true )
2025-04-13 17:09:46 (19116): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-13 17:09:46 (19116): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-13 17:09:46 (19116): Guest Log: 2.6.3.0 1646 0 32204 144813 4 1 3117322 4096000 0 65024 0 0 n/a 1 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-13 17:09:46 (19116): Guest Log: copied the webapp to /var/www
2025-04-13 17:09:46 (19116): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-13 17:09:46 (19116): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-13 17:09:46 (19116): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-13 17:09:46 (19116): Guest Log:  *** Starting ATLAS job. (PandaID=6600995694 taskID=44075164) ***
2025-04-13 18:58:36 (19116): Guest Log:  *** Job finished ***
2025-04-13 18:58:36 (19116): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-13 18:58:36 (19116): Guest Log: 2025-04-13 15:58:18,999 | INFO     | [data] queue_monitor thread has finished
2025-04-13 18:58:36 (19116): Guest Log: 2025-04-13 15:58:25,261 | INFO     | job.realtimelogging is not enabled
2025-04-13 18:58:36 (19116): Guest Log: 2025-04-13 15:58:26,385 | INFO     | [payload] run_realtimelog thread has finished
2025-04-13 18:58:36 (19116): Guest Log: 2025-04-13 15:58:27,177 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140236104156992)>', '<ExcThread(monitor, started 140235354654464)>']
2025-04-13 18:58:36 (19116): Guest Log: 2025-04-13 15:58:28,115 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-13 18:58:36 (19116): Guest Log: 2025-04-13 15:58:28,115 | INFO     | [monitor] control thread has ended
2025-04-13 18:58:36 (19116): Guest Log: 2025-04-13 15:58:32,197 | INFO     | all workflow threads have been joined
2025-04-13 18:58:36 (19116): Guest Log: 2025-04-13 15:58:32,197 | INFO     | end of generic workflow (traces error code: 0)
2025-04-13 18:58:36 (19116): Guest Log: 2025-04-13 15:58:32,197 | INFO     | traces error code: 0
2025-04-13 18:58:36 (19116): Guest Log: 2025-04-13 15:58:32,197 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-13 18:58:36 (19116): Guest Log: 2025-04-13 15:58:32,300 [wrapper] ==== pilot stdout END ====
2025-04-13 18:58:36 (19116): Guest Log: 2025-04-13 15:58:32,304 [wrapper] ==== wrapper stdout RESUME ====
2025-04-13 18:58:36 (19116): Guest Log: 2025-04-13 15:58:32,309 [wrapper] pilotpid: 6011
2025-04-13 18:58:36 (19116): Guest Log: 2025-04-13 15:58:32,313 [wrapper] Pilot exit status: 0
2025-04-13 18:58:36 (19116): Guest Log: 2025-04-13 15:58:33,146 [wrapper] pandaids: 6600995694
2025-04-13 18:58:36 (19116): Guest Log: 2025-04-13 15:58:33,177 [wrapper] cleanup supervisor_pilot  3514 6012
2025-04-13 18:58:36 (19116): Guest Log: 2025-04-13 15:58:33,181 [wrapper] Test setup, not cleaning
2025-04-13 18:58:36 (19116): Guest Log: 2025-04-13 15:58:33,187 [wrapper] apfmon messages muted
2025-04-13 18:58:36 (19116): Guest Log: 2025-04-13 15:58:33,191 [wrapper] ==== wrapper stdout END ====
2025-04-13 18:58:36 (19116): Guest Log: 2025-04-13 15:58:33,195 [wrapper] ==== wrapper stderr END ====
2025-04-13 18:58:36 (19116): Guest Log:  *** Error codes and diagnostics ***
2025-04-13 18:58:36 (19116): Guest Log:     "exeErrorCode": 0,
2025-04-13 18:58:36 (19116): Guest Log:     "exeErrorDiag": "",
2025-04-13 18:58:36 (19116): Guest Log:     "pilotErrorCode": 0,
2025-04-13 18:58:36 (19116): Guest Log:     "pilotErrorDiag": "",
2025-04-13 18:58:36 (19116): Guest Log:  *** Listing of results directory ***
2025-04-13 18:58:36 (19116): Guest Log: total 190724
2025-04-13 18:58:36 (19116): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 13 09:08 runpilot2-wrapper.sh
2025-04-13 18:58:36 (19116): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 13 09:08 queuedata.json
2025-04-13 18:58:36 (19116): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 13 09:08 pilot3.tar.gz
2025-04-13 18:58:36 (19116): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 13 14:09 start_atlas.sh
2025-04-13 18:58:36 (19116): Guest Log: -rwxr-xr-x. 1 atlas atlas    508871 Apr 13 14:09 input.tar.gz
2025-04-13 18:58:36 (19116): Guest Log: -rwxr-xr-x. 1 atlas atlas      9070 Apr 13 14:09 init_data.xml
2025-04-13 18:58:36 (19116): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 13 14:09 EVNT.44075162._002163.pool.root.1 -> /data/./ATLAS.root_0
2025-04-13 18:58:36 (19116): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Apr 13 14:09 pandaJob.out
2025-04-13 18:58:36 (19116): Guest Log: -rw-------. 1 atlas atlas       424 Apr 13 14:09 setup.sh.local
2025-04-13 18:58:36 (19116): Guest Log: -rw-------. 1 atlas atlas    985772 Apr 13 14:10 agis_schedconf.cvmfs.json
2025-04-13 18:58:36 (19116): Guest Log: -rw-------. 1 atlas atlas   1603529 Apr 13 14:10 agis_ddmendpoints.agis.ALL.json
2025-04-13 18:58:36 (19116): Guest Log: drwx------. 4 atlas atlas      4096 Apr 13 14:10 pilot3
2025-04-13 18:58:36 (19116): Guest Log: -rw-------. 1 atlas atlas        95 Apr 13 15:57 pilot_heartbeat.json
2025-04-13 18:58:36 (19116): Guest Log: -rw-------. 1 atlas atlas 189766854 Apr 13 15:57 HITS.44075164._055550.pool.root.1
2025-04-13 18:58:36 (19116): Guest Log: -rw-------. 1 atlas atlas      1023 Apr 13 15:58 memory_monitor_summary.json
2025-04-13 18:58:36 (19116): Guest Log: -rw-------. 1 atlas atlas    313316 Apr 13 15:58 log.44075164._055550.job.log.tgz.1
2025-04-13 18:58:36 (19116): Guest Log: -rw-------. 1 atlas atlas      7669 Apr 13 15:58 heartbeat.json
2025-04-13 18:58:36 (19116): Guest Log: -rw-------. 1 atlas atlas      4485 Apr 13 15:58 pilotlog.txt
2025-04-13 18:58:36 (19116): Guest Log: -rw-------. 1 atlas atlas    567871 Apr 13 15:58 log.44075164._055550.job.log.1
2025-04-13 18:58:36 (19116): Guest Log: -rw-------. 1 atlas atlas       357 Apr 13 15:58 output.list
2025-04-13 18:58:36 (19116): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 13 15:58 runtime_log
2025-04-13 18:58:36 (19116): Guest Log: -rw-------. 1 atlas atlas    901120 Apr 13 15:58 result.tar.gz
2025-04-13 18:58:36 (19116): Guest Log: -rw-r--r--. 1 atlas atlas     10943 Apr 13 15:58 runtime_log.err
2025-04-13 18:58:36 (19116): Guest Log: -rw-------. 1 atlas atlas       658 Apr 13 15:58 NoGKDmhV8N7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmqHzKDmLj9lhm.diag
2025-04-13 18:58:36 (19116): Guest Log: Looking for outputfile HITS.44075164._055550.pool.root.1
2025-04-13 18:58:36 (19116): Guest Log: HITS file was successfully produced
2025-04-13 18:58:36 (19116): Guest Log: -rw-------. 1 atlas atlas 189766854 Apr 13 15:57 /home/atlas/RunAtlas/HITS.44075164._055550.pool.root.1
2025-04-13 18:58:37 (19116): Guest Log: Successfully finished the ATLAS job!
2025-04-13 18:58:37 (19116): Guest Log: Copying the results back to the shared directory!
2025-04-13 18:58:37 (19116): Guest Log:  *** Contents of shared directory: ***
2025-04-13 18:58:37 (19116): Guest Log: total 400296
2025-04-13 18:58:37 (19116): Guest Log: -rwxrwxrwx. 1 root root 218687993 Apr 13 14:08 ATLAS.root_0
2025-04-13 18:58:37 (19116): Guest Log: -rwxrwxrwx. 1 root root 189766854 Apr 13  2025 HITS.pool.root.1
2025-04-13 18:58:37 (19116): Guest Log: -rwxrwxrwx. 1 root root      9070 Apr 13 14:08 init_data.xml
2025-04-13 18:58:37 (19116): Guest Log: -rwxrwxrwx. 1 root root    508871 Apr 13 12:22 input.tar.gz
2025-04-13 18:58:37 (19116): Guest Log: -rwxrwxrwx. 1 root root    901120 Apr 13  2025 result.tar.gz
2025-04-13 18:58:37 (19116): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 13 12:22 start_atlas.sh
2025-04-13 18:58:37 (19116): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-13 18:58:37 (19116): VM Completion File Detected.
2025-04-13 18:58:37 (19116): Powering off VM.
2025-04-13 18:58:38 (19116): Successfully stopped VM.
2025-04-13 18:58:38 (19116): Deregistering VM. (boinc_1e9db3d41b65cf0d, slot#8)
2025-04-13 18:58:38 (19116): Removing network bandwidth throttle group from VM.
2025-04-13 18:58:38 (19116): Removing VM from VirtualBox.
18:58:44 (19116): called boinc_finish(0)

</stderr_txt>
]]>

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