Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:09:17 (2442): wrapper (7.7.26015): starting
07:09:17 (2442): wrapper: running run_atlas (--nthreads 10)
[2025-04-13 07:09:17] Arguments: --nthreads 10
[2025-04-13 07:09:17] Threads: 10
[2025-04-13 07:09:17] Checking for CVMFS
[2025-04-13 07:09:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-13 07:09:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-13 07:09:19] Running cvmfs_config stat atlas.cern.ch
[2025-04-13 07:09:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-13 07:09:23] 2.11.2.0 1570 33884 220304 144808 3 181 12545676 18432000 11794 130560 0 141868241 98.890 365144060 35979 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-13 07:09:23] CVMFS is ok
[2025-04-13 07:09:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-13 07:09:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-13 07:09:23] Further information can be found at the LHC@home message board.
[2025-04-13 07:09:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-13 07:09:23] Checking for apptainer binary...
[2025-04-13 07:09:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-13 07:09:23] Running /usr/bin/apptainer --version
[2025-04-13 07:09:24] apptainer version 1.3.2-1.el7
[2025-04-13 07:09:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-13 07:10:08] c-210-9.aglt2.org
[2025-04-13 07:10:08] apptainer works
[2025-04-13 07:10:08] Set ATHENA_PROC_NUMBER=10
[2025-04-13 07:10:08] Set ATHENA_CORE_NUMBER=10
[2025-04-13 07:10:08] Starting ATLAS job with PandaID=6600759486
[2025-04-13 07:10:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-14 01:12:52]  *** The last 200 lines of the pilot log: ***
[2025-04-14 01:12:52] 2025-04-14 05:12:22,438 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-14 01:12:52] 2025-04-14 05:12:22,452 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-14 01:12:52] 2025-04-14 05:12:22,453 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-14 01:12:52] 2025-04-14 05:12:22,848 | INFO     | fitting pss+swap vs Time
[2025-04-14 01:12:52] 2025-04-14 05:12:22,861 | INFO     | sum of square deviations: 358963426985.91327
[2025-04-14 01:12:52] 2025-04-14 05:12:23,652 | INFO     | sum of deviations: 1192392087378.16
[2025-04-14 01:12:52] 2025-04-14 05:12:23,653 | INFO     | mean x: 1744575390.6466668
[2025-04-14 01:12:52] 2025-04-14 05:12:23,653 | INFO     | mean y: 2524869.6742857145
[2025-04-14 01:12:52] 2025-04-14 05:12:23,653 | INFO     | -- intersect: -5792544308.009327
[2025-04-14 01:12:52] 2025-04-14 05:12:23,653 | INFO     | intersect: -5792544308.009327
[2025-04-14 01:12:52] 2025-04-14 05:12:23,683 | INFO     | chi2: 14.624668469075667
[2025-04-14 01:12:52] 2025-04-14 05:12:23,748 | INFO     | sum of square deviations: 353860044951.4126
[2025-04-14 01:12:52] 2025-04-14 05:12:24,436 | INFO     | sum of deviations: 1476297554344.9941
[2025-04-14 01:12:52] 2025-04-14 05:12:24,437 | INFO     | mean x: 1744575238.1502392
[2025-04-14 01:12:52] 2025-04-14 05:12:24,437 | INFO     | mean y: 2533344.815311005
[2025-04-14 01:12:52] 2025-04-14 05:12:24,437 | INFO     | -- intersect: -7275802240.672079
[2025-04-14 01:12:52] 2025-04-14 05:12:24,437 | INFO     | intersect: -7275802240.672079
[2025-04-14 01:12:52] 2025-04-14 05:12:24,487 | INFO     | chi2: 11.534505237650416
[2025-04-14 01:12:52] 2025-04-14 05:12:24,487 | INFO     | current chi2=11.534505237650416 (change=21.129800227331653 %)
[2025-04-14 01:12:52] 2025-04-14 05:12:24,500 | INFO     | right removable region: 1044
[2025-04-14 01:12:52] 2025-04-14 05:12:24,516 | INFO     | sum of square deviations: 353859438486.8114
[2025-04-14 01:12:52] 2025-04-14 05:12:24,620 | INFO     | monitor loop #3002: job 0:6600759486 is in state 'finished'
[2025-04-14 01:12:52] 2025-04-14 05:12:24,620 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-14 01:12:52] 2025-04-14 05:12:25,222 | INFO     | sum of deviations: 807855670308.1082
[2025-04-14 01:12:52] 2025-04-14 05:12:25,222 | INFO     | mean x: 1744575543.152153
[2025-04-14 01:12:52] 2025-04-14 05:12:25,222 | INFO     | mean y: 2536357.9741626796
[2025-04-14 01:12:52] 2025-04-14 05:12:25,223 | INFO     | -- intersect: -3980302847.454697
[2025-04-14 01:12:52] 2025-04-14 05:12:25,223 | INFO     | intersect: -3980302847.454697
[2025-04-14 01:12:52] 2025-04-14 05:12:25,237 | INFO     | chi2: 9.863664211272456
[2025-04-14 01:12:52] 2025-04-14 05:12:25,238 | INFO     | current chi2=9.863664211272456 (change=32.554613240433504 %)
[2025-04-14 01:12:52] 2025-04-14 05:12:25,247 | INFO     | sum of square deviations: 348804055550.1386
[2025-04-14 01:12:52] 2025-04-14 05:12:25,962 | INFO     | sum of deviations: 504725472936.53156
[2025-04-14 01:12:52] 2025-04-14 05:12:25,967 | INFO     | mean x: 1744575695.6576922
[2025-04-14 01:12:52] 2025-04-14 05:12:25,967 | INFO     | mean y: 2545500.5211538463
[2025-04-14 01:12:52] 2025-04-14 05:12:25,967 | INFO     | -- intersect: -2521885563.434282
[2025-04-14 01:12:52] 2025-04-14 05:12:25,967 | INFO     | intersect: -2521885563.434282
[2025-04-14 01:12:52] 2025-04-14 05:12:25,969 | INFO     | chi2: 6.979010736222023
[2025-04-14 01:12:52] 2025-04-14 05:12:25,969 | INFO     | current chi2=6.979010736222023 (change=29.24525220306846 %)
[2025-04-14 01:12:52] 2025-04-14 05:12:25,971 | INFO     | sum of square deviations: 343797172130.05444
[2025-04-14 01:12:52] 2025-04-14 05:12:26,016 | INFO     | sum of deviations: 282101756610.20667
[2025-04-14 01:12:52] 2025-04-14 05:12:26,016 | INFO     | mean x: 1744575848.1613526
[2025-04-14 01:12:52] 2025-04-14 05:12:26,016 | INFO     | mean y: 2552280.3101449274
[2025-04-14 01:12:52] 2025-04-14 05:12:26,017 | INFO     | -- intersect: -1428954291.593492
[2025-04-14 01:12:52] 2025-04-14 05:12:26,017 | INFO     | intersect: -1428954291.593492
[2025-04-14 01:12:52] 2025-04-14 05:12:26,018 | INFO     | chi2: 5.457736710853729
[2025-04-14 01:12:52] 2025-04-14 05:12:26,018 | INFO     | current chi2=5.457736710853729 (change=21.79784618287908 %)
[2025-04-14 01:12:52] 2025-04-14 05:12:26,019 | INFO     | left removable region: 30
[2025-04-14 01:12:52] 2025-04-14 05:12:26,020 | INFO     | sum of square deviations: 323291848234.2536
[2025-04-14 01:12:52] 2025-04-14 05:12:26,290 | INFO     | sum of deviations: 138366619471.51187
[2025-04-14 01:12:52] 2025-04-14 05:12:26,290 | INFO     | mean x: 1744576122.6755424
[2025-04-14 01:12:52] 2025-04-14 05:12:26,290 | INFO     | mean y: 2574367.3875739644
[2025-04-14 01:12:52] 2025-04-14 05:12:26,290 | INFO     | -- intersect: -744091847.1296047
[2025-04-14 01:12:52] 2025-04-14 05:12:26,290 | INFO     | intersect: -744091847.1296047
[2025-04-14 01:12:52] 2025-04-14 05:12:26,292 | INFO     | chi2: 0.07982568562165084
[2025-04-14 01:12:52] 2025-04-14 05:12:26,292 | INFO     | -- intersect: -744091847.1296047
[2025-04-14 01:12:52] 2025-04-14 05:12:26,328 | INFO     | current memory leak: 0.43 B/s (using 1014 data points, chi2=0.08)
[2025-04-14 01:12:52] 2025-04-14 05:12:26,330 | INFO     | ..............................
[2025-04-14 01:12:52] 2025-04-14 05:12:26,330 | INFO     | . Timing measurements:
[2025-04-14 01:12:52] 2025-04-14 05:12:26,330 | INFO     | . get job = 1 s
[2025-04-14 01:12:52] 2025-04-14 05:12:26,330 | INFO     | . initial setup = 27 s
[2025-04-14 01:12:52] 2025-04-14 05:12:26,330 | INFO     | . payload setup = 158 s
[2025-04-14 01:12:52] 2025-04-14 05:12:26,331 | INFO     | . stage-in = 1 s
[2025-04-14 01:12:52] 2025-04-14 05:12:26,331 | INFO     | . payload execution = 64192 s
[2025-04-14 01:12:52] 2025-04-14 05:12:26,331 | INFO     | . stage-out = 21 s
[2025-04-14 01:12:52] 2025-04-14 05:12:26,331 | INFO     | . log creation = 9 s
[2025-04-14 01:12:52] 2025-04-14 05:12:26,331 | INFO     | ..............................
[2025-04-14 01:12:52] 2025-04-14 05:12:26,803 | INFO     | PID=27484 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-14 01:12:52] 2025-04-14 05:12:26,871 | INFO     | .. there are 42 such processes running
[2025-04-14 01:12:52] 2025-04-14 05:12:27,171 | INFO     | 
[2025-04-14 01:12:52] 2025-04-14 05:12:27,171 | INFO     | job summary report
[2025-04-14 01:12:52] 2025-04-14 05:12:27,171 | INFO     | --------------------------------------------------
[2025-04-14 01:12:52] 2025-04-14 05:12:27,171 | INFO     | PanDA job id: 6600759486
[2025-04-14 01:12:52] 2025-04-14 05:12:27,171 | INFO     | task id: 44075164
[2025-04-14 01:12:52] 2025-04-14 05:12:27,171 | INFO     | errors: (none)
[2025-04-14 01:12:52] 2025-04-14 05:12:27,184 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-14 01:12:52] 2025-04-14 05:12:27,184 | INFO     | pilot state: finished 
[2025-04-14 01:12:52] 2025-04-14 05:12:27,184 | INFO     | transexitcode: 0
[2025-04-14 01:12:52] 2025-04-14 05:12:27,184 | INFO     | exeerrorcode: 0
[2025-04-14 01:12:52] 2025-04-14 05:12:27,184 | INFO     | exeerrordiag: 
[2025-04-14 01:12:52] 2025-04-14 05:12:27,184 | INFO     | exitcode: 0
[2025-04-14 01:12:52] 2025-04-14 05:12:27,197 | INFO     | exitmsg: OK
[2025-04-14 01:12:52] 2025-04-14 05:12:27,197 | INFO     | cpuconsumptiontime: 57479 s
[2025-04-14 01:12:52] 2025-04-14 05:12:27,197 | INFO     | nevents: 400
[2025-04-14 01:12:52] 2025-04-14 05:12:27,197 | INFO     | neventsw: 0
[2025-04-14 01:12:52] 2025-04-14 05:12:27,197 | INFO     | pid: 20274
[2025-04-14 01:12:52] 2025-04-14 05:12:27,197 | INFO     | pgrp: 20274
[2025-04-14 01:12:52] 2025-04-14 05:12:27,197 | INFO     | corecount: 10
[2025-04-14 01:12:52] 2025-04-14 05:12:27,211 | INFO     | event service: False
[2025-04-14 01:12:52] 2025-04-14 05:12:27,211 | INFO     | sizes: {0: 2416448, 1: 2417049, 2: 2417133, 3: 2417360, 4: 2417360, 5: 2417388, 17: 2417572, 28: 2417600, 40: 2417628, 52: 2417656, 63: 2417684, 74: 2417992, 85: 2
[2025-04-14 01:12:52] 2025-04-14 05:12:27,211 | INFO     | --------------------------------------------------
[2025-04-14 01:12:52] 2025-04-14 05:12:27,211 | INFO     | 
[2025-04-14 01:12:52] 2025-04-14 05:12:27,211 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-14 01:12:52] 2025-04-14 05:12:27,627 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-14 01:12:52] 2025-04-14 05:12:27,635 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-14 01:12:52] 2025-04-14 05:12:27,635 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-14 01:12:52] 2025-04-14 05:12:27,635 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-14 01:12:52] 2025-04-14 05:12:27,635 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-14 01:12:52] 2025-04-14 05:12:27,635 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-14 01:12:52] 2025-04-14 05:12:27,636 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-14 01:12:52] 2025-04-14 05:12:27,636 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-14 01:12:52] 2025-04-14 05:12:27,636 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-14 01:12:52] 2025-04-14 05:12:27,636 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-14 01:12:52] 2025-04-14 05:12:27,636 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-14 01:12:52] 2025-04-14 05:12:27,636 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-14 01:12:52] 2025-04-14 05:12:27,636 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-14 01:12:52] 2025-04-14 05:12:27,636 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-14 01:12:52] 2025-04-14 05:12:27,636 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-14 01:12:52] 2025-04-14 05:12:27,636 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-14 01:12:52] 2025-04-14 05:12:27,652 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-14 01:12:52] 2025-04-14 05:12:27,652 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-14 01:12:52] 2025-04-14 05:12:27,652 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-14 01:12:52] 2025-04-14 05:12:27,652 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-14 01:12:52] 2025-04-14 05:12:27,652 | INFO     | job 6600759486 has completed (purged errors)
[2025-04-14 01:12:52] 2025-04-14 05:12:27,653 | INFO     | overall cleanup function is called
[2025-04-14 01:12:52] 2025-04-14 05:12:28,663 | INFO     | --- collectZombieJob: --- 10, [20274]
[2025-04-14 01:12:52] 2025-04-14 05:12:28,663 | INFO     | zombie collector waiting for pid 20274
[2025-04-14 01:12:52] 2025-04-14 05:12:28,663 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-14 01:12:52] 2025-04-14 05:12:28,663 | INFO     | collected zombie processes
[2025-04-14 01:12:52] 2025-04-14 05:12:28,663 | INFO     | will attempt to kill all subprocesses of pid=20274
[2025-04-14 01:12:52] 2025-04-14 05:12:32,331 | INFO     | process IDs to be killed: [20274] (in reverse order)
[2025-04-14 01:12:52] 2025-04-14 05:12:34,657 | WARNING  | found no corresponding commands to process id(s)
[2025-04-14 01:12:52] 2025-04-14 05:12:34,658 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-14 01:12:52] 2025-04-14 05:12:34,817 | INFO     | did not find any defunct processes belonging to 20274
[2025-04-14 01:12:52] 2025-04-14 05:12:34,997 | INFO     | did not find any defunct processes belonging to 20274
[2025-04-14 01:12:52] 2025-04-14 05:12:34,997 | INFO     | ready for new job
[2025-04-14 01:12:52] 2025-04-14 05:12:35,021 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-14 01:12:52] 2025-04-14 05:12:35,075 | INFO     | **************************************
[2025-04-14 01:12:52] 2025-04-14 05:12:35,075 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-14 01:12:52] 2025-04-14 05:12:35,075 | INFO     | **************************************
[2025-04-14 01:12:52] 2025-04-14 05:12:35,075 | INFO     | 
[2025-04-14 01:12:52] 2025-04-14 05:12:35,107 | INFO     | architecture information:
[2025-04-14 01:12:52] 2025-04-14 05:12:35,133 | INFO     | executing command: cat /etc/os-release
[2025-04-14 01:12:52] 2025-04-14 05:12:35,423 | INFO     | cat /etc/os-release:
[2025-04-14 01:12:52] NAME="CentOS Linux"
[2025-04-14 01:12:52] VERSION="7 (Core)"
[2025-04-14 01:12:52] ID="centos"
[2025-04-14 01:12:52] ID_LIKE="rhel fedora"
[2025-04-14 01:12:52] VERSION_ID="7"
[2025-04-14 01:12:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-14 01:12:52] ANSI_COLOR="0;31"
[2025-04-14 01:12:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-14 01:12:52] HOME_URL="https://www.centos.org/"
[2025-04-14 01:12:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-14 01:12:52] 
[2025-04-14 01:12:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-14 01:12:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-14 01:12:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-14 01:12:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-14 01:12:52] 
[2025-04-14 01:12:52] 2025-04-14 05:12:35,423 | INFO     | **************************************
[2025-04-14 01:12:52] 2025-04-14 05:12:35,927 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-14 01:12:52] 2025-04-14 05:12:36,360 | INFO     | sufficient remaining disk space (56963891200 B)
[2025-04-14 01:12:52] 2025-04-14 05:12:36,360 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-14 01:12:52] 2025-04-14 05:12:36,361 | INFO     | current server update state: UPDATING_FINAL
[2025-04-14 01:12:52] 2025-04-14 05:12:36,361 | INFO     | update_server=False
[2025-04-14 01:12:52] 2025-04-14 05:12:36,361 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-14 01:12:52] 2025-04-14 05:12:36,372 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-14 01:12:52] 2025-04-14 05:12:36,372 | INFO     | aborting loop
[2025-04-14 01:12:52] 2025-04-14 05:12:36,372 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-14 01:12:52] 2025-04-14 05:12:36,649 | INFO     | all payload control threads have been joined
[2025-04-14 01:12:52] 2025-04-14 05:12:37,058 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-14 01:12:52] 2025-04-14 05:12:37,058 | INFO     | all job control threads have been joined
[2025-04-14 01:12:52] 2025-04-14 05:12:37,104 | INFO     | found 0 job(s) in 20 queues
[2025-04-14 01:12:52] 2025-04-14 05:12:37,104 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-14 01:12:52] 2025-04-14 05:12:37,104 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-14 01:12:52] 2025-04-14 05:12:37,160 | INFO     | all data control threads have been joined
[2025-04-14 01:12:52] 2025-04-14 05:12:37,367 | INFO     | [job] retrieve thread has finished
[2025-04-14 01:12:52] 2025-04-14 05:12:37,381 | INFO     | [job] queue monitor thread has finished
[2025-04-14 01:12:52] 2025-04-14 05:12:37,395 | INFO     | [job] job monitor thread has finished
[2025-04-14 01:12:52] 2025-04-14 05:12:37,539 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-14 01:12:52] 2025-04-14 05:12:37,655 | INFO     | [payload] control thread has finished
[2025-04-14 01:12:52] 2025-04-14 05:12:38,065 | INFO     | [job] control thread has finished
[2025-04-14 01:12:52] 2025-04-14 05:12:38,166 | INFO     | [data] control thread has finished
[2025-04-14 01:12:52] 2025-04-14 05:12:38,258 | INFO     | [payload] failed_post thread has finished
[2025-04-14 01:12:52] 2025-04-14 05:12:38,383 | INFO     | [data] copytool_in thread has finished
[2025-04-14 01:12:52] 2025-04-14 05:12:38,392 | INFO     | [payload] validate_pre thread has finished
[2025-04-14 01:12:52] 2025-04-14 05:12:38,400 | INFO     | [job] create_data_payload thread has finished
[2025-04-14 01:12:52] 2025-04-14 05:12:38,408 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-14 01:12:52] 2025-04-14 05:12:38,417 | INFO     | [payload] execute_payloads thread has finished
[2025-04-14 01:12:52] 2025-04-14 05:12:38,697 | INFO     | [job] validate thread has finished
[2025-04-14 01:12:52] 2025-04-14 05:12:38,963 | INFO     | [payload] validate_post thread has finished
[2025-04-14 01:12:52] 2025-04-14 05:12:39,546 | INFO     | [data] copytool_out thread has finished
[2025-04-14 01:12:52] 2025-04-14 05:12:41,068 | INFO     | [data] queue_monitor thread has finished
[2025-04-14 01:12:52] 2025-04-14 05:12:42,971 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140152887658304)>', '<ExcThread(monitor, started 140152139663104)>']
[2025-04-14 01:12:52] 2025-04-14 05:12:43,150 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-14 01:12:52] 2025-04-14 05:12:43,151 | INFO     | [monitor] control thread has ended
[2025-04-14 01:12:52] 2025-04-14 05:12:48,019 | INFO     | all workflow threads have been joined
[2025-04-14 01:12:52] 2025-04-14 05:12:48,019 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-14 01:12:52] 2025-04-14 05:12:48,019 | INFO     | traces error code: 0
[2025-04-14 01:12:52] 2025-04-14 05:12:48,213 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-14 01:12:52] 2025-04-14 05:12:48,805 [wrapper] ==== pilot stdout END ====
[2025-04-14 01:12:52] 2025-04-14 05:12:48,842 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-14 01:12:52] 2025-04-14 05:12:48,869 [wrapper] pilotpid: 27484
[2025-04-14 01:12:52] 2025-04-14 05:12:48,899 [wrapper] Pilot exit status: 0
[2025-04-14 01:12:52] 2025-04-14 05:12:49,084 [wrapper] pandaids: 6600759486
[2025-04-14 01:12:52] 2025-04-14 05:12:49,716 [wrapper] cleanup supervisor_pilot  3325 27485
[2025-04-14 01:12:52] 2025-04-14 05:12:49,740 [wrapper] Test setup, not cleaning
[2025-04-14 01:12:52] 2025-04-14 05:12:49,766 [wrapper] apfmon messages muted
[2025-04-14 01:12:52] 2025-04-14 05:12:49,793 [wrapper] ==== wrapper stdout END ====
[2025-04-14 01:12:52] 2025-04-14 05:12:49,827 [wrapper] ==== wrapper stderr END ====
[2025-04-14 01:12:52]  *** Error codes and diagnostics ***
[2025-04-14 01:12:52]     "exeErrorCode": 0,
[2025-04-14 01:12:52]     "exeErrorDiag": "",
[2025-04-14 01:12:52]     "pilotErrorCode": 0,
[2025-04-14 01:12:52]     "pilotErrorDiag": "",
[2025-04-14 01:12:52]  *** Listing of results directory ***
[2025-04-14 01:12:52] total 417204
[2025-04-14 01:12:52] -rw-r--r-- 1 boincer umatlas    495897 Apr 13 02:47 pilot3.tar.gz
[2025-04-14 01:12:52] -rw-r--r-- 1 boincer umatlas      5111 Apr 13 02:51 queuedata.json
[2025-04-14 01:12:52] -rwx------ 1 boincer umatlas     37140 Apr 13 02:52 runpilot2-wrapper.sh
[2025-04-14 01:12:52] -rw-r--r-- 1 boincer umatlas       100 Apr 13 07:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-14 01:12:52] -rwxr-xr-x 1 boincer umatlas      7986 Apr 13 07:09 run_atlas
[2025-04-14 01:12:52] -rw-r--r-- 1 boincer umatlas       105 Apr 13 07:09 job.xml
[2025-04-14 01:12:52] -rw-r--r-- 2 boincer umatlas 220393563 Apr 13 07:09 EVNT.44075162._002029.pool.root.1
[2025-04-14 01:12:52] -rw-r--r-- 2 boincer umatlas     17569 Apr 13 07:09 start_atlas.sh
[2025-04-14 01:12:52] drwxrwx--x 2 boincer umatlas      4096 Apr 13 07:09 shared
[2025-04-14 01:12:52] -rw-r--r-- 2 boincer umatlas    508887 Apr 13 07:09 input.tar.gz
[2025-04-14 01:12:52] -rw-r--r-- 1 boincer umatlas         0 Apr 13 07:09 boinc_lockfile
[2025-04-14 01:12:52] -rw-r--r-- 1 boincer umatlas      2549 Apr 13 07:10 pandaJob.out
[2025-04-14 01:12:52] -rw------- 1 boincer umatlas       467 Apr 13 07:10 setup.sh.local
[2025-04-14 01:12:52] -rw------- 1 boincer umatlas    985788 Apr 13 07:14 agis_schedconf.cvmfs.json
[2025-04-14 01:12:52] drwx------ 4 boincer umatlas      4096 Apr 13 07:14 pilot3
[2025-04-14 01:12:52] -rw------- 1 boincer umatlas 192812553 Apr 14 01:05 HITS.44075164._054467.pool.root.1
[2025-04-14 01:12:52] -rw-r--r-- 1 boincer umatlas       531 Apr 14 01:05 boinc_task_state.xml
[2025-04-14 01:12:52] -rw------- 1 boincer umatlas      1057 Apr 14 01:10 memory_monitor_summary.json
[2025-04-14 01:12:52] -rw------- 1 boincer umatlas   1603529 Apr 14 01:10 agis_ddmendpoints.agis.ALL.json
[2025-04-14 01:12:52] -rw------- 1 boincer umatlas    804487 Apr 14 01:10 log.44075164._054467.job.log.tgz.1
[2025-04-14 01:12:52] -rw------- 1 boincer umatlas      7757 Apr 14 01:12 heartbeat.json
[2025-04-14 01:12:52] -rw------- 1 boincer umatlas        95 Apr 14 01:12 pilot_heartbeat.json
[2025-04-14 01:12:52] -rw-r--r-- 1 boincer umatlas      6228 Apr 14 01:12 init_data.xml
[2025-04-14 01:12:52] -rw-r--r-- 1 boincer umatlas      8192 Apr 14 01:12 boinc_mmap_file
[2025-04-14 01:12:52] -rw-r--r-- 1 boincer umatlas        28 Apr 14 01:12 wrapper_checkpoint.txt
[2025-04-14 01:12:52] -rw------- 1 boincer umatlas      4353 Apr 14 01:12 pilotlog.txt
[2025-04-14 01:12:52] -rw------- 1 boincer umatlas   4279822 Apr 14 01:12 log.44075164._054467.job.log.1
[2025-04-14 01:12:52] -rw------- 1 boincer umatlas       357 Apr 14 01:12 output.list
[2025-04-14 01:12:52] -rw-r--r-- 1 boincer umatlas       620 Apr 14 01:12 runtime_log
[2025-04-14 01:12:52] -rw------- 1 boincer umatlas   5099520 Apr 14 01:12 result.tar.gz
[2025-04-14 01:12:52] -rw-r--r-- 1 boincer umatlas     11416 Apr 14 01:12 runtime_log.err
[2025-04-14 01:12:52] -rw------- 1 boincer umatlas       663 Apr 14 01:12 NWHNDmAO6N7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmeJTLDmXhqFOo.diag
[2025-04-14 01:12:52] -rw-r--r-- 1 boincer umatlas     21036 Apr 14 01:12 stderr.txt
[2025-04-14 01:12:52] HITS file was successfully produced:
[2025-04-14 01:12:52] -rw------- 1 boincer umatlas 192812553 Apr 14 01:05 shared/HITS.pool.root.1
[2025-04-14 01:12:52]  *** Contents of shared directory: ***
[2025-04-14 01:12:52] total 409036
[2025-04-14 01:12:52] -rw-r--r-- 2 boincer umatlas 220393563 Apr 13 07:09 ATLAS.root_0
[2025-04-14 01:12:52] -rw-r--r-- 2 boincer umatlas     17569 Apr 13 07:09 start_atlas.sh
[2025-04-14 01:12:52] -rw-r--r-- 2 boincer umatlas    508887 Apr 13 07:09 input.tar.gz
[2025-04-14 01:12:52] -rw------- 1 boincer umatlas 192812553 Apr 14 01:05 HITS.pool.root.1
[2025-04-14 01:12:52] -rw------- 1 boincer umatlas   5099520 Apr 14 01:12 result.tar.gz
01:12:53 (2442): run_atlas exited; CPU time 59726.789440
01:12:53 (2442): called boinc_finish(0)

</stderr_txt>
]]>

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