Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:37:20 (30663): wrapper (7.7.26015): starting
04:37:20 (30663): wrapper: running run_atlas (--nthreads 12)
[2025-04-13 04:37:20] Arguments: --nthreads 12
[2025-04-13 04:37:20] Threads: 12
[2025-04-13 04:37:20] Checking for CVMFS
[2025-04-13 04:37:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-13 04:37:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-13 04:37:20] Running cvmfs_config stat atlas.cern.ch
[2025-04-13 04:37:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-13 04:37:21] 2.11.2.0 25961 376168 164608 144804 0 58 14024140 20275200 1 130560 0 16448989 99.988 5166319 54729 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-13 04:37:21] CVMFS is ok
[2025-04-13 04:37:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-13 04:37:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-13 04:37:21] Further information can be found at the LHC@home message board.
[2025-04-13 04:37:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-13 04:37:21] Checking for apptainer binary...
[2025-04-13 04:37:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-13 04:37:21] Running /usr/bin/apptainer --version
[2025-04-13 04:37:21] apptainer version 1.3.2-1.el7
[2025-04-13 04:37:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-13 04:37:22] c-205-5.aglt2.org
[2025-04-13 04:37:22] apptainer works
[2025-04-13 04:37:22] Set ATHENA_PROC_NUMBER=12
[2025-04-13 04:37:22] Set ATHENA_CORE_NUMBER=12
[2025-04-13 04:37:22] Starting ATLAS job with PandaID=6600388722
[2025-04-13 04:37:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-13 05:59:36]  *** The last 200 lines of the pilot log: ***
[2025-04-13 05:59:36]  is_tar=False
[2025-04-13 05:59:36]  lfn=log.44075164._037014.job.log.tgz.1
[2025-04-13 05:59:36]  mtime=0
[2025-04-13 05:59:36]  protocol_id=None
[2025-04-13 05:59:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-13 05:59:36]  replicas=None
[2025-04-13 05:59:36]  scope=mc23_13p6TeV
[2025-04-13 05:59:36]  status=None
[2025-04-13 05:59:36]  status_code=0
[2025-04-13 05:59:36]  storage_token=
[2025-04-13 05:59:36]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6600388722/log.44075164._037014.job.log.tgz.1
[2025-04-13 05:59:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fc/c8/log.44075164._037014.job.log.tgz.1
[2025-04-13 05:59:36]  workdir=None
[2025-04-13 05:59:36] ]
[2025-04-13 05:59:36] 2025-04-13 09:59:13,011 | INFO     | transferring file log.44075164._037014.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6600388722/log.44075164._037014.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-13 05:59:36] 2025-04-13 09:59:13,012 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6600388722/log.44075164._037014.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075164._037014.job
[2025-04-13 05:59:36] 2025-04-13 09:59:13,033 | INFO     | adding to output.list: log.44075164._037014.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fc/c8/log.44075164._037014.job.log.tg
[2025-04-13 05:59:36] 2025-04-13 09:59:13,034 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-13 05:59:36] 2025-04-13 09:59:13,035 | INFO     | summary of transferred files:
[2025-04-13 05:59:36] 2025-04-13 09:59:13,035 | INFO     |  -- lfn=log.44075164._037014.job.log.tgz.1, status_code=0, status=transferred
[2025-04-13 05:59:36] 2025-04-13 09:59:13,035 | INFO     | stage-out finished correctly
[2025-04-13 05:59:36] 2025-04-13 09:59:14,461 | WARNING  | process 8309 can no longer be monitored (due to stat problems) - aborting
[2025-04-13 05:59:36] 2025-04-13 09:59:14,461 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6600388722/memory_monitor_summary.json (trf name=prmon)
[2025-04-13 05:59:36] 2025-04-13 09:59:14,547 | INFO     | number of running child processes to parent process 8309: 1
[2025-04-13 05:59:36] 2025-04-13 09:59:14,547 | INFO     | maximum number of monitored processes: 6
[2025-04-13 05:59:36] 2025-04-13 09:59:14,903 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-13 05:59:36] 2025-04-13 09:59:14,987 | INFO     | job 6600388722 has state=finished
[2025-04-13 05:59:36] 2025-04-13 09:59:14,987 | INFO     | preparing for final server update for job 6600388722 in state='finished'
[2025-04-13 05:59:36] 2025-04-13 09:59:14,988 | INFO     | this job has now completed (state=finished)
[2025-04-13 05:59:36] 2025-04-13 09:59:14,988 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-13 05:59:36] 2025-04-13 09:59:14,988 | INFO     | log transfer has been attempted: DONE
[2025-04-13 05:59:36] 2025-04-13 09:59:14,988 | INFO     | job 6600388722 has finished - writing final server update
[2025-04-13 05:59:36] 2025-04-13 09:59:14,989 | INFO     | total number of processed events: 400 (read)
[2025-04-13 05:59:36] 2025-04-13 09:59:14,990 | INFO     | executing command: lscpu
[2025-04-13 05:59:36] 2025-04-13 09:59:15,017 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-13 05:59:36] 2025-04-13 09:59:15,589 | INFO     | PID=1861 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-04-13 05:59:36] 2025-04-13 09:59:17,050 | INFO     | monitor loop #366: job 0:6600388722 is in state 'finished'
[2025-04-13 05:59:36] 2025-04-13 09:59:17,050 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-13 05:59:36] 2025-04-13 09:59:19,553 | INFO     | monitor loop #367: job 0:6600388722 is in state 'finished'
[2025-04-13 05:59:36] 2025-04-13 09:59:19,553 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-13 05:59:36] 2025-04-13 09:59:20,729 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-13 05:59:36] 2025-04-13 09:59:20,729 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6600388722/memory_monitor_summary.json (trf name=prmon)
[2025-04-13 05:59:36] 2025-04-13 09:59:20,730 | INFO     | extracted standard info from prmon json
[2025-04-13 05:59:36] 2025-04-13 09:59:20,730 | INFO     | extracted standard memory fields from prmon json
[2025-04-13 05:59:36] 2025-04-13 09:59:20,731 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-13 05:59:36] 2025-04-13 09:59:20,731 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-13 05:59:36] 2025-04-13 09:59:20,731 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-13 05:59:36] 2025-04-13 09:59:20,734 | INFO     | fitting pss+swap vs Time
[2025-04-13 05:59:36] 2025-04-13 09:59:20,734 | INFO     | sum of square deviations: 120605052.0
[2025-04-13 05:59:36] 2025-04-13 09:59:20,735 | INFO     | sum of deviations: 16265277107.000002
[2025-04-13 05:59:36] 2025-04-13 09:59:20,735 | INFO     | mean x: 1744535986.0
[2025-04-13 05:59:36] 2025-04-13 09:59:20,735 | INFO     | mean y: 2618920.821917808
[2025-04-13 05:59:36] 2025-04-13 09:59:20,735 | INFO     | -- intersect: -235272444311.3839
[2025-04-13 05:59:36] 2025-04-13 09:59:20,735 | INFO     | intersect: -235272444311.3839
[2025-04-13 05:59:36] 2025-04-13 09:59:20,736 | INFO     | chi2: 2.3278223185100795
[2025-04-13 05:59:36] 2025-04-13 09:59:20,736 | INFO     | -- intersect: -235272444311.3839
[2025-04-13 05:59:36] 2025-04-13 09:59:20,736 | INFO     | current memory leak: 134.86 B/s (using 73 data points, chi2=2.33)
[2025-04-13 05:59:36] 2025-04-13 09:59:20,737 | INFO     | ..............................
[2025-04-13 05:59:36] 2025-04-13 09:59:20,737 | INFO     | . Timing measurements:
[2025-04-13 05:59:36] 2025-04-13 09:59:20,737 | INFO     | . get job = 0 s
[2025-04-13 05:59:36] 2025-04-13 09:59:20,737 | INFO     | . initial setup = 2 s
[2025-04-13 05:59:36] 2025-04-13 09:59:20,737 | INFO     | . payload setup = 7 s
[2025-04-13 05:59:36] 2025-04-13 09:59:20,737 | INFO     | . stage-in = 0 s
[2025-04-13 05:59:36] 2025-04-13 09:59:20,738 | INFO     | . payload execution = 4869 s
[2025-04-13 05:59:36] 2025-04-13 09:59:20,738 | INFO     | . stage-out = 0 s
[2025-04-13 05:59:36] 2025-04-13 09:59:20,738 | INFO     | . log creation = 0 s
[2025-04-13 05:59:36] 2025-04-13 09:59:20,738 | INFO     | ..............................
[2025-04-13 05:59:36] 2025-04-13 09:59:20,823 | INFO     | 
[2025-04-13 05:59:36] 2025-04-13 09:59:20,823 | INFO     | job summary report
[2025-04-13 05:59:36] 2025-04-13 09:59:20,823 | INFO     | --------------------------------------------------
[2025-04-13 05:59:36] 2025-04-13 09:59:20,823 | INFO     | PanDA job id: 6600388722
[2025-04-13 05:59:36] 2025-04-13 09:59:20,823 | INFO     | task id: 44075164
[2025-04-13 05:59:36] 2025-04-13 09:59:20,824 | INFO     | errors: (none)
[2025-04-13 05:59:36] 2025-04-13 09:59:20,824 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-13 05:59:36] 2025-04-13 09:59:20,824 | INFO     | pilot state: finished 
[2025-04-13 05:59:36] 2025-04-13 09:59:20,824 | INFO     | transexitcode: 0
[2025-04-13 05:59:36] 2025-04-13 09:59:20,824 | INFO     | exeerrorcode: 0
[2025-04-13 05:59:36] 2025-04-13 09:59:20,824 | INFO     | exeerrordiag: 
[2025-04-13 05:59:36] 2025-04-13 09:59:20,825 | INFO     | exitcode: 0
[2025-04-13 05:59:36] 2025-04-13 09:59:20,825 | INFO     | exitmsg: OK
[2025-04-13 05:59:36] 2025-04-13 09:59:20,825 | INFO     | cpuconsumptiontime: 46574 s
[2025-04-13 05:59:36] 2025-04-13 09:59:20,825 | INFO     | nevents: 400
[2025-04-13 05:59:36] 2025-04-13 09:59:20,825 | INFO     | neventsw: 0
[2025-04-13 05:59:36] 2025-04-13 09:59:20,825 | INFO     | pid: 8309
[2025-04-13 05:59:36] 2025-04-13 09:59:20,826 | INFO     | pgrp: 8309
[2025-04-13 05:59:36] 2025-04-13 09:59:20,826 | INFO     | corecount: 12
[2025-04-13 05:59:36] 2025-04-13 09:59:20,826 | INFO     | event service: False
[2025-04-13 05:59:36] 2025-04-13 09:59:20,826 | INFO     | sizes: {0: 2417327, 1: 2417327, 5: 2417561, 11: 2417617, 4880: 2443703, 4881: 2452644, 4883: 2452828, 4889: 2452998}
[2025-04-13 05:59:36] 2025-04-13 09:59:20,826 | INFO     | --------------------------------------------------
[2025-04-13 05:59:36] 2025-04-13 09:59:20,826 | INFO     | 
[2025-04-13 05:59:36] 2025-04-13 09:59:20,827 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-13 05:59:36] 2025-04-13 09:59:20,850 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-13 05:59:36] 2025-04-13 09:59:20,851 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-13 05:59:36] 2025-04-13 09:59:20,851 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-13 05:59:36] 2025-04-13 09:59:20,851 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-13 05:59:36] 2025-04-13 09:59:20,851 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-13 05:59:36] 2025-04-13 09:59:20,851 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-13 05:59:36] 2025-04-13 09:59:20,852 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-13 05:59:36] 2025-04-13 09:59:20,852 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-13 05:59:36] 2025-04-13 09:59:20,852 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-13 05:59:36] 2025-04-13 09:59:20,852 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-13 05:59:36] 2025-04-13 09:59:20,852 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-13 05:59:36] 2025-04-13 09:59:20,852 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-13 05:59:36] 2025-04-13 09:59:20,853 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-13 05:59:36] 2025-04-13 09:59:20,853 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-13 05:59:36] 2025-04-13 09:59:20,853 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-13 05:59:36] 2025-04-13 09:59:20,853 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-13 05:59:36] 2025-04-13 09:59:20,853 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-13 05:59:36] 2025-04-13 09:59:20,853 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-13 05:59:36] 2025-04-13 09:59:20,854 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-13 05:59:36] 2025-04-13 09:59:20,854 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-13 05:59:36] 2025-04-13 09:59:20,854 | INFO     | job 6600388722 has completed (purged errors)
[2025-04-13 05:59:36] 2025-04-13 09:59:20,854 | INFO     | overall cleanup function is called
[2025-04-13 05:59:36] 2025-04-13 09:59:21,862 | INFO     | --- collectZombieJob: --- 10, [8309]
[2025-04-13 05:59:36] 2025-04-13 09:59:21,862 | INFO     | zombie collector waiting for pid 8309
[2025-04-13 05:59:36] 2025-04-13 09:59:21,863 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-13 05:59:36] 2025-04-13 09:59:21,863 | INFO     | collected zombie processes
[2025-04-13 05:59:36] 2025-04-13 09:59:21,863 | INFO     | will attempt to kill all subprocesses of pid=8309
[2025-04-13 05:59:36] 2025-04-13 09:59:21,952 | INFO     | process IDs to be killed: [8309] (in reverse order)
[2025-04-13 05:59:36] 2025-04-13 09:59:22,005 | WARNING  | found no corresponding commands to process id(s)
[2025-04-13 05:59:36] 2025-04-13 09:59:22,005 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-13 05:59:36] 2025-04-13 09:59:22,008 | INFO     | did not find any defunct processes belonging to 8309
[2025-04-13 05:59:36] 2025-04-13 09:59:22,010 | INFO     | did not find any defunct processes belonging to 8309
[2025-04-13 05:59:36] 2025-04-13 09:59:22,010 | INFO     | ready for new job
[2025-04-13 05:59:36] 2025-04-13 09:59:22,011 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-13 05:59:36] 2025-04-13 09:59:22,012 | INFO     | **************************************
[2025-04-13 05:59:36] 2025-04-13 09:59:22,012 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-13 05:59:36] 2025-04-13 09:59:22,012 | INFO     | **************************************
[2025-04-13 05:59:36] 2025-04-13 09:59:22,012 | INFO     | 
[2025-04-13 05:59:36] 2025-04-13 09:59:22,012 | INFO     | architecture information:
[2025-04-13 05:59:36] 2025-04-13 09:59:22,013 | INFO     | executing command: cat /etc/os-release
[2025-04-13 05:59:36] 2025-04-13 09:59:22,027 | INFO     | cat /etc/os-release:
[2025-04-13 05:59:36] NAME="CentOS Linux"
[2025-04-13 05:59:36] VERSION="7 (Core)"
[2025-04-13 05:59:36] ID="centos"
[2025-04-13 05:59:36] ID_LIKE="rhel fedora"
[2025-04-13 05:59:36] VERSION_ID="7"
[2025-04-13 05:59:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-13 05:59:36] ANSI_COLOR="0;31"
[2025-04-13 05:59:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-13 05:59:36] HOME_URL="https://www.centos.org/"
[2025-04-13 05:59:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-13 05:59:36] 
[2025-04-13 05:59:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-13 05:59:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-13 05:59:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-13 05:59:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-13 05:59:36] 
[2025-04-13 05:59:36] 2025-04-13 09:59:22,028 | INFO     | **************************************
[2025-04-13 05:59:36] 2025-04-13 09:59:22,531 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-13 05:59:36] 2025-04-13 09:59:22,553 | INFO     | sufficient remaining disk space (29406265344 B)
[2025-04-13 05:59:36] 2025-04-13 09:59:22,554 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-13 05:59:36] 2025-04-13 09:59:22,554 | INFO     | current server update state: UPDATING_FINAL
[2025-04-13 05:59:36] 2025-04-13 09:59:22,554 | INFO     | update_server=False
[2025-04-13 05:59:36] 2025-04-13 09:59:22,554 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-13 05:59:36] 2025-04-13 09:59:22,555 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-13 05:59:36] 2025-04-13 09:59:22,555 | INFO     | found 0 job(s) in 20 queues
[2025-04-13 05:59:36] 2025-04-13 09:59:22,555 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-13 05:59:36] 2025-04-13 09:59:22,555 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-13 05:59:36] 2025-04-13 09:59:22,556 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-13 05:59:36] 2025-04-13 09:59:22,864 | INFO     | all job control threads have been joined
[2025-04-13 05:59:36] 2025-04-13 09:59:23,061 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-13 05:59:36] 2025-04-13 09:59:23,061 | INFO     | aborting loop
[2025-04-13 05:59:36] 2025-04-13 09:59:23,560 | INFO     | [job] retrieve thread has finished
[2025-04-13 05:59:36] 2025-04-13 09:59:23,561 | INFO     | [job] queue monitor thread has finished
[2025-04-13 05:59:36] 2025-04-13 09:59:23,612 | INFO     | all data control threads have been joined
[2025-04-13 05:59:36] 2025-04-13 09:59:23,634 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-13 05:59:36] 2025-04-13 09:59:23,697 | INFO     | [payload] execute_payloads thread has finished
[2025-04-13 05:59:36] 2025-04-13 09:59:23,739 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-13 05:59:36] 2025-04-13 09:59:23,869 | INFO     | [job] control thread has finished
[2025-04-13 05:59:36] 2025-04-13 09:59:23,942 | INFO     | [payload] failed_post thread has finished
[2025-04-13 05:59:36] 2025-04-13 09:59:24,044 | INFO     | all payload control threads have been joined
[2025-04-13 05:59:36] 2025-04-13 09:59:24,065 | INFO     | [job] job monitor thread has finished
[2025-04-13 05:59:36] 2025-04-13 09:59:24,308 | INFO     | [job] validate thread has finished
[2025-04-13 05:59:36] 2025-04-13 09:59:24,487 | INFO     | [payload] validate_post thread has finished
[2025-04-13 05:59:36] 2025-04-13 09:59:24,586 | INFO     | [job] create_data_payload thread has finished
[2025-04-13 05:59:36] 2025-04-13 09:59:24,618 | INFO     | [data] control thread has finished
[2025-04-13 05:59:36] 2025-04-13 09:59:24,693 | INFO     | [payload] validate_pre thread has finished
[2025-04-13 05:59:36] 2025-04-13 09:59:24,898 | INFO     | [data] copytool_in thread has finished
[2025-04-13 05:59:36] 2025-04-13 09:59:25,050 | INFO     | [payload] control thread has finished
[2025-04-13 05:59:36] 2025-04-13 09:59:25,494 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-13 05:59:36] 2025-04-13 09:59:25,639 | INFO     | [data] copytool_out thread has finished
[2025-04-13 05:59:36] 2025-04-13 09:59:29,499 | INFO     | [data] queue_monitor thread has finished
[2025-04-13 05:59:36] 2025-04-13 09:59:31,499 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140531992876864)>', '<ExcThread(monitor, started 140531246028544)>']
[2025-04-13 05:59:36] 2025-04-13 09:59:31,602 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-13 05:59:36] 2025-04-13 09:59:31,602 | INFO     | [monitor] control thread has ended
[2025-04-13 05:59:36] 2025-04-13 09:59:36,518 | INFO     | all workflow threads have been joined
[2025-04-13 05:59:36] 2025-04-13 09:59:36,518 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-13 05:59:36] 2025-04-13 09:59:36,518 | INFO     | traces error code: 0
[2025-04-13 05:59:36] 2025-04-13 09:59:36,519 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-13 05:59:36] 2025-04-13 09:59:36,606 [wrapper] ==== pilot stdout END ====
[2025-04-13 05:59:36] 2025-04-13 09:59:36,610 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-13 05:59:36] 2025-04-13 09:59:36,614 [wrapper] pilotpid: 1861
[2025-04-13 05:59:36] 2025-04-13 09:59:36,618 [wrapper] Pilot exit status: 0
[2025-04-13 05:59:36] 2025-04-13 09:59:36,634 [wrapper] pandaids: 6600388722
[2025-04-13 05:59:36] 2025-04-13 09:59:36,672 [wrapper] cleanup supervisor_pilot 20829 1862
[2025-04-13 05:59:36] 2025-04-13 09:59:36,675 [wrapper] Test setup, not cleaning
[2025-04-13 05:59:36] 2025-04-13 09:59:36,679 [wrapper] apfmon messages muted
[2025-04-13 05:59:36] 2025-04-13 09:59:36,683 [wrapper] ==== wrapper stdout END ====
[2025-04-13 05:59:36] 2025-04-13 09:59:36,687 [wrapper] ==== wrapper stderr END ====
[2025-04-13 05:59:36]  *** Error codes and diagnostics ***
[2025-04-13 05:59:36]     "exeErrorCode": 0,
[2025-04-13 05:59:36]     "exeErrorDiag": "",
[2025-04-13 05:59:36]     "pilotErrorCode": 0,
[2025-04-13 05:59:36]     "pilotErrorDiag": "",
[2025-04-13 05:59:36]  *** Listing of results directory ***
[2025-04-13 05:59:36] total 408604
[2025-04-13 05:59:36] -rw-r--r-- 1 boincer umatlas      5111 Apr 11 20:59 queuedata.json
[2025-04-13 05:59:36] -rw-r--r-- 1 boincer umatlas    495897 Apr 11 21:00 pilot3.tar.gz
[2025-04-13 05:59:36] -rwx------ 1 boincer umatlas     37140 Apr 11 21:01 runpilot2-wrapper.sh
[2025-04-13 05:59:36] -rw-r--r-- 1 boincer umatlas       100 Apr 13 04:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-13 05:59:36] -rwxr-xr-x 1 boincer umatlas      7986 Apr 13 04:37 run_atlas
[2025-04-13 05:59:36] -rw-r--r-- 1 boincer umatlas       105 Apr 13 04:37 job.xml
[2025-04-13 05:59:36] -rw-r--r-- 2 boincer umatlas 219426352 Apr 13 04:37 EVNT.44075162._001326.pool.root.1
[2025-04-13 05:59:36] -rw-r--r-- 2 boincer umatlas    508886 Apr 13 04:37 input.tar.gz
[2025-04-13 05:59:36] -rw-r--r-- 2 boincer umatlas     17569 Apr 13 04:37 start_atlas.sh
[2025-04-13 05:59:36] drwxrwx--x 2 boincer umatlas      4096 Apr 13 04:37 shared
[2025-04-13 05:59:36] -rw-r--r-- 1 boincer umatlas         0 Apr 13 04:37 boinc_lockfile
[2025-04-13 05:59:36] -rw-r--r-- 1 boincer umatlas      2550 Apr 13 04:37 pandaJob.out
[2025-04-13 05:59:36] -rw------- 1 boincer umatlas       424 Apr 13 04:37 setup.sh.local
[2025-04-13 05:59:36] -rw------- 1 boincer umatlas    985800 Apr 13 04:37 agis_schedconf.cvmfs.json
[2025-04-13 05:59:36] -rw------- 1 boincer umatlas   1603529 Apr 13 04:37 agis_ddmendpoints.agis.ALL.json
[2025-04-13 05:59:36] drwx------ 4 boincer umatlas      4096 Apr 13 04:37 pilot3
[2025-04-13 05:59:36] -rw-r--r-- 1 boincer umatlas      5867 Apr 13 05:57 init_data.xml
[2025-04-13 05:59:36] -rw------- 1 boincer umatlas        95 Apr 13 05:58 pilot_heartbeat.json
[2025-04-13 05:59:36] -rw------- 1 boincer umatlas 193501012 Apr 13 05:58 HITS.44075164._037014.pool.root.1
[2025-04-13 05:59:36] -rw-r--r-- 1 boincer umatlas       529 Apr 13 05:58 boinc_task_state.xml
[2025-04-13 05:59:36] -rw------- 1 boincer umatlas      1044 Apr 13 05:59 memory_monitor_summary.json
[2025-04-13 05:59:36] -rw------- 1 boincer umatlas    358399 Apr 13 05:59 log.44075164._037014.job.log.tgz.1
[2025-04-13 05:59:36] -rw------- 1 boincer umatlas      7744 Apr 13 05:59 heartbeat.json
[2025-04-13 05:59:36] -rw-r--r-- 1 boincer umatlas      8192 Apr 13 05:59 boinc_mmap_file
[2025-04-13 05:59:36] -rw-r--r-- 1 boincer umatlas        27 Apr 13 05:59 wrapper_checkpoint.txt
[2025-04-13 05:59:36] -rw------- 1 boincer umatlas      4476 Apr 13 05:59 pilotlog.txt
[2025-04-13 05:59:36] -rw------- 1 boincer umatlas    465243 Apr 13 05:59 log.44075164._037014.job.log.1
[2025-04-13 05:59:36] -rw------- 1 boincer umatlas       357 Apr 13 05:59 output.list
[2025-04-13 05:59:36] -rw-r--r-- 1 boincer umatlas       620 Apr 13 05:59 runtime_log
[2025-04-13 05:59:36] -rw------- 1 boincer umatlas    839680 Apr 13 05:59 result.tar.gz
[2025-04-13 05:59:36] -rw-r--r-- 1 boincer umatlas     11010 Apr 13 05:59 runtime_log.err
[2025-04-13 05:59:36] -rw------- 1 boincer umatlas       657 Apr 13 05:59 EncLDm3QeN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmh8PLDm5Zy1sn.diag
[2025-04-13 05:59:36] -rw-r--r-- 1 boincer umatlas     21608 Apr 13 05:59 stderr.txt
[2025-04-13 05:59:36] HITS file was successfully produced:
[2025-04-13 05:59:36] -rw------- 1 boincer umatlas 193501012 Apr 13 05:58 shared/HITS.pool.root.1
[2025-04-13 05:59:36]  *** Contents of shared directory: ***
[2025-04-13 05:59:36] total 404596
[2025-04-13 05:59:36] -rw-r--r-- 2 boincer umatlas 219426352 Apr 13 04:37 ATLAS.root_0
[2025-04-13 05:59:36] -rw-r--r-- 2 boincer umatlas    508886 Apr 13 04:37 input.tar.gz
[2025-04-13 05:59:36] -rw-r--r-- 2 boincer umatlas     17569 Apr 13 04:37 start_atlas.sh
[2025-04-13 05:59:36] -rw------- 1 boincer umatlas 193501012 Apr 13 05:58 HITS.pool.root.1
[2025-04-13 05:59:36] -rw------- 1 boincer umatlas    839680 Apr 13 05:59 result.tar.gz
05:59:38 (30663): run_atlas exited; CPU time 46559.012895
05:59:38 (30663): called boinc_finish(0)

</stderr_txt>
]]>

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