Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-14 13:27:37 (7336): Detected: vboxwrapper 26206
2025-04-14 13:27:37 (7336): Detected: BOINC client v8.0.2
2025-04-14 13:27:38 (7336): Detected: VirtualBox VboxManage Interface (Version: 6.1.36)
2025-04-14 13:27:38 (7336): Successfully copied 'init_data.xml' to the shared directory.
2025-04-14 13:27:38 (7336): Create VM. (boinc_cbbeb3b9294876af, slot#0)
2025-04-14 13:27:39 (7336): Setting Memory Size for VM. (4200MB)
2025-04-14 13:27:39 (7336): Setting CPU Count for VM. (2)
2025-04-14 13:27:39 (7336): Setting Chipset Options for VM.
2025-04-14 13:27:40 (7336): Setting Graphics Controller Options for VM.
2025-04-14 13:27:40 (7336): Setting Boot Options for VM.
2025-04-14 13:27:40 (7336): Setting Network Configuration for NAT.
2025-04-14 13:27:41 (7336): Enabling VM Network Access.
2025-04-14 13:27:41 (7336): Disabling USB Support for VM.
2025-04-14 13:27:41 (7336): Disabling COM Port Support for VM.
2025-04-14 13:27:41 (7336): Disabling LPT Port Support for VM.
2025-04-14 13:27:42 (7336): Disabling Audio Support for VM.
2025-04-14 13:27:42 (7336): Disabling Clipboard Support for VM.
2025-04-14 13:27:42 (7336): Disabling Drag and Drop Support for VM.
2025-04-14 13:27:42 (7336): Adding storage controller(s) to VM.
2025-04-14 13:27:43 (7336): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-14 13:27:44 (7336): Adding VirtualBox Guest Additions to VM.
2025-04-14 13:27:44 (7336): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-14 13:27:44 (7336): forwarding host port 62849 to guest port 80
2025-04-14 13:27:45 (7336): Enabling remote desktop for VM.
2025-04-14 13:27:45 (7336): Enabling shared directory for VM.
2025-04-14 13:27:46 (7336): Starting VM using VBoxManage interface. (boinc_cbbeb3b9294876af, slot#0)
2025-04-14 13:27:51 (7336): Successfully started VM. (PID = '9964')
2025-04-14 13:27:51 (7336): Reporting VM Process ID to BOINC.
2025-04-14 13:27:51 (7336): Guest Log: BIOS: VirtualBox 6.1.36
2025-04-14 13:27:51 (7336): Guest Log: CPUID EDX: 0x178bfbff
2025-04-14 13:27:51 (7336): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-14 13:27:51 (7336): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-14 13:27:51 (7336): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-14 13:27:51 (7336): Detected: Web Application Enabled (http://localhost:62849)
2025-04-14 13:27:51 (7336): Detected: Remote Desktop Enabled (localhost:62850)
2025-04-14 13:27:51 (7336): Preference change detected
2025-04-14 13:27:51 (7336): Setting CPU throttle for VM. (100%)
2025-04-14 13:27:51 (7336): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-14 13:27:53 (7336): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-14 13:27:53 (7336): Guest Log: BIOS: Booting from Hard Disk...
2025-04-14 13:27:56 (7336): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-14 13:27:56 (7336): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-14 13:27:56 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-14 13:28:03 (7336): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-14 13:28:03 (7336): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-14 13:28:10 (7336): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-14 13:28:10 (7336): Guest Log: 00:00:00.000177 main     Log opened 2025-04-14T13:28:08.009243000Z
2025-04-14 13:28:10 (7336): Guest Log: 00:00:00.000315 main     OS Product: Linux
2025-04-14 13:28:10 (7336): Guest Log: 00:00:00.000362 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-14 13:28:10 (7336): Guest Log: 00:00:00.000404 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-14 13:28:10 (7336): Guest Log: 00:00:00.000446 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-14 13:28:10 (7336): Guest Log: 00:00:00.000447 main     Process ID: 1258
2025-04-14 13:28:10 (7336): Guest Log: 00:00:00.000448 main     Package type: LINUX_64BITS_GENERIC
2025-04-14 13:28:10 (7336): Guest Log: 00:00:00.001710 main     5.2.32 r132073 started. Verbose level = 0
2025-04-14 13:28:10 (7336): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-14 13:28:10 (7336): Guest Log: [INFO] Mounting shared directory
2025-04-14 13:28:10 (7336): Guest Log: [INFO] Checking for init_data.xml
2025-04-14 13:28:12 (7336): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-14 13:28:12 (7336): Guest Log: [INFO] Detected branch: prod
2025-04-14 13:28:12 (7336): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-14 13:28:12 (7336): Guest Log: Copying input files
2025-04-14 13:28:13 (7336): Guest Log: Copied input files into RunAtlas.
2025-04-14 13:28:13 (7336): Guest Log: Detected user-configured HTTP proxy at http://192.168.35.184:3128 - will set in /etc/cvmfs/default.local
2025-04-14 13:28:20 (7336): Guest Log: 00:00:10.003919 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 310 065 000ns (GuestNow=1 744 630 099 702 444 000 ns GuestLast=1 744 637 288 012 509 000 ns fSetTimeLastLoop=true )
2025-04-14 13:28:24 (7336): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-14 13:28:24 (7336): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-14 13:28:24 (7336): Guest Log: 2.6.3.0 1533 0 31528 144848 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
2025-04-14 13:28:25 (7336): Guest Log: copied the webapp to /var/www
2025-04-14 13:28:25 (7336): Guest Log: ATHENA_PROC_NUMBER=2
2025-04-14 13:28:25 (7336): Guest Log: ATHENA_CORE_NUMBER=2
2025-04-14 13:28:25 (7336): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-14 13:28:26 (7336): Guest Log:  *** Starting ATLAS job. (PandaID=6600569456 taskID=44075164) ***
2025-04-14 15:07:50 (7336): Status Report: Elapsed Time: '6000.000000'
2025-04-14 15:07:50 (7336): Status Report: CPU Time: '11196.737773'
2025-04-14 16:47:51 (7336): Status Report: Elapsed Time: '12000.000000'
2025-04-14 16:47:51 (7336): Status Report: CPU Time: '23192.559469'
2025-04-14 18:27:52 (7336): Status Report: Elapsed Time: '18000.000000'
2025-04-14 18:27:52 (7336): Status Report: CPU Time: '35189.270371'
2025-04-14 19:29:45 (7336): Guest Log:  *** Job finished ***
2025-04-14 19:29:45 (7336): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-14 19:29:45 (7336): Guest Log: 2025-04-14 17:29:32,664 | INFO     | [data] queue_monitor thread has finished
2025-04-14 19:29:45 (7336): Guest Log: 2025-04-14 17:29:36,338 | INFO     | job.realtimelogging is not enabled
2025-04-14 19:29:45 (7336): Guest Log: 2025-04-14 17:29:37,341 | INFO     | [payload] run_realtimelog thread has finished
2025-04-14 19:29:45 (7336): Guest Log: 2025-04-14 17:29:38,290 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140332651157312)>', '<ExcThread(monitor, started 140332050134784)>']
2025-04-14 19:29:45 (7336): Guest Log: 2025-04-14 17:29:38,483 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-14 19:29:45 (7336): Guest Log: 2025-04-14 17:29:38,483 | INFO     | [monitor] control thread has ended
2025-04-14 19:29:45 (7336): Guest Log: 2025-04-14 17:29:43,309 | INFO     | all workflow threads have been joined
2025-04-14 19:29:45 (7336): Guest Log: 2025-04-14 17:29:43,310 | INFO     | end of generic workflow (traces error code: 0)
2025-04-14 19:29:45 (7336): Guest Log: 2025-04-14 17:29:43,310 | INFO     | traces error code: 0
2025-04-14 19:29:45 (7336): Guest Log: 2025-04-14 17:29:43,310 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-14 19:29:45 (7336): Guest Log: 2025-04-14 17:29:43,393 [wrapper] ==== pilot stdout END ====
2025-04-14 19:29:45 (7336): Guest Log: 2025-04-14 17:29:43,398 [wrapper] ==== wrapper stdout RESUME ====
2025-04-14 19:29:45 (7336): Guest Log: 2025-04-14 17:29:43,403 [wrapper] pilotpid: 5823
2025-04-14 19:29:45 (7336): Guest Log: 2025-04-14 17:29:43,408 [wrapper] Pilot exit status: 0
2025-04-14 19:29:45 (7336): Guest Log: 2025-04-14 17:29:43,446 [wrapper] pandaids: 6600569456
2025-04-14 19:29:45 (7336): Guest Log: 2025-04-14 17:29:43,475 [wrapper] cleanup supervisor_pilot 28415 5824
2025-04-14 19:29:45 (7336): Guest Log: 2025-04-14 17:29:43,481 [wrapper] Test setup, not cleaning
2025-04-14 19:29:45 (7336): Guest Log: 2025-04-14 17:29:43,487 [wrapper] apfmon messages muted
2025-04-14 19:29:45 (7336): Guest Log: 2025-04-14 17:29:43,492 [wrapper] ==== wrapper stdout END ====
2025-04-14 19:29:45 (7336): Guest Log: 2025-04-14 17:29:43,497 [wrapper] ==== wrapper stderr END ====
2025-04-14 19:29:45 (7336): Guest Log:  *** Error codes and diagnostics ***
2025-04-14 19:29:45 (7336): Guest Log:     "exeErrorCode": 0,
2025-04-14 19:29:45 (7336): Guest Log:     "exeErrorDiag": "",
2025-04-14 19:29:45 (7336): Guest Log:     "pilotErrorCode": 0,
2025-04-14 19:29:45 (7336): Guest Log:     "pilotErrorDiag": "",
2025-04-14 19:29:45 (7336): Guest Log:  *** Listing of results directory ***
2025-04-14 19:29:45 (7336): Guest Log: total 192648
2025-04-14 19:29:45 (7336): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 12 21:43 pilot3.tar.gz
2025-04-14 19:29:45 (7336): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 12 21:44 queuedata.json
2025-04-14 19:29:45 (7336): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 12 21:46 runpilot2-wrapper.sh
2025-04-14 19:29:45 (7336): Guest Log: -rwxr-xr-x. 1 atlas atlas      8322 Apr 14 11:28 init_data.xml
2025-04-14 19:29:45 (7336): Guest Log: -rwxr-xr-x. 1 atlas atlas    508884 Apr 14 11:28 input.tar.gz
2025-04-14 19:29:45 (7336): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 14 11:28 start_atlas.sh
2025-04-14 19:29:45 (7336): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 14 11:28 EVNT.44075162._001922.pool.root.1 -> /data/./ATLAS.root_0
2025-04-14 19:29:45 (7336): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Apr 14 11:28 pandaJob.out
2025-04-14 19:29:45 (7336): Guest Log: -rw-------. 1 atlas atlas       461 Apr 14 11:28 setup.sh.local
2025-04-14 19:29:45 (7336): Guest Log: -rw-------. 1 atlas atlas    986024 Apr 14 11:29 agis_schedconf.cvmfs.json
2025-04-14 19:29:45 (7336): Guest Log: drwx------. 4 atlas atlas      4096 Apr 14 11:29 pilot3
2025-04-14 19:29:45 (7336): Guest Log: -rw-------. 1 atlas atlas 188943658 Apr 14 17:28 HITS.44075164._049375.pool.root.1
2025-04-14 19:29:45 (7336): Guest Log: -rw-------. 1 atlas atlas        95 Apr 14 17:28 pilot_heartbeat.json
2025-04-14 19:29:45 (7336): Guest Log: -rw-------. 1 atlas atlas      1024 Apr 14 17:29 memory_monitor_summary.json
2025-04-14 19:29:45 (7336): Guest Log: -rw-------. 1 atlas atlas   1603529 Apr 14 17:29 agis_ddmendpoints.agis.ALL.json
2025-04-14 19:29:45 (7336): Guest Log: -rw-------. 1 atlas atlas    377182 Apr 14 17:29 log.44075164._049375.job.log.tgz.1
2025-04-14 19:29:45 (7336): Guest Log: -rw-------. 1 atlas atlas      7714 Apr 14 17:29 heartbeat.json
2025-04-14 19:29:45 (7336): Guest Log: -rw-------. 1 atlas atlas      4485 Apr 14 17:29 pilotlog.txt
2025-04-14 19:29:45 (7336): Guest Log: -rw-------. 1 atlas atlas   1897042 Apr 14 17:29 log.44075164._049375.job.log.1
2025-04-14 19:29:45 (7336): Guest Log: -rw-------. 1 atlas atlas       357 Apr 14 17:29 output.list
2025-04-14 19:29:45 (7336): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 14 17:29 runtime_log
2025-04-14 19:29:45 (7336): Guest Log: -rw-------. 1 atlas atlas   2293760 Apr 14 17:29 result.tar.gz
2025-04-14 19:29:45 (7336): Guest Log: -rw-r--r--. 1 atlas atlas     11326 Apr 14 17:29 runtime_log.err
2025-04-14 19:29:45 (7336): Guest Log: -rw-------. 1 atlas atlas       663 Apr 14 17:29 AsTMDmXrxN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmlOSLDmBNrSQm.diag
2025-04-14 19:29:45 (7336): Guest Log: Looking for outputfile HITS.44075164._049375.pool.root.1
2025-04-14 19:29:45 (7336): Guest Log: HITS file was successfully produced
2025-04-14 19:29:45 (7336): Guest Log: -rw-------. 1 atlas atlas 188943658 Apr 14 17:28 /home/atlas/RunAtlas/HITS.44075164._049375.pool.root.1
2025-04-14 19:29:46 (7336): Guest Log: Successfully finished the ATLAS job!
2025-04-14 19:29:46 (7336): Guest Log: Copying the results back to the shared directory!
2025-04-14 19:29:46 (7336): Guest Log:  *** Contents of shared directory: ***
2025-04-14 19:29:46 (7336): Guest Log: total 404000
2025-04-14 19:29:46 (7336): Guest Log: -rwxrwxrwx. 1 root root 221909853 Apr 14 11:27 ATLAS.root_0
2025-04-14 19:29:46 (7336): Guest Log: -rwxrwxrwx. 1 root root 188943658 Apr 14 17:29 HITS.pool.root.1
2025-04-14 19:29:46 (7336): Guest Log: -rwxrwxrwx. 1 root root      8322 Apr 14 11:27 init_data.xml
2025-04-14 19:29:46 (7336): Guest Log: -rwxrwxrwx. 1 root root    508884 Apr 13 04:51 input.tar.gz
2025-04-14 19:29:46 (7336): Guest Log: -rwxrwxrwx. 1 root root   2293760 Apr 14  2025 result.tar.gz
2025-04-14 19:29:46 (7336): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 13 04:51 start_atlas.sh
2025-04-14 19:29:46 (7336): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-14 19:29:46 (7336): VM Completion File Detected.
2025-04-14 19:29:46 (7336): Powering off VM.
2025-04-14 19:29:47 (7336): Successfully stopped VM.
2025-04-14 19:29:47 (7336): Deregistering VM. (boinc_cbbeb3b9294876af, slot#0)
2025-04-14 19:29:47 (7336): Removing network bandwidth throttle group from VM.
2025-04-14 19:29:47 (7336): Removing VM from VirtualBox.
19:29:52 (7336): called boinc_finish(0)

</stderr_txt>
]]>

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