Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:44:27 (1772921): wrapper (7.7.26015): starting
00:44:27 (1772921): wrapper: running run_atlas (--nthreads 9)
[2025-04-13 00:44:27] Arguments: --nthreads 9
[2025-04-13 00:44:27] Threads: 9
[2025-04-13 00:44:27] Checking for CVMFS
[2025-04-13 00:44:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-13 00:44:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-13 00:44:29] Running cvmfs_config stat atlas.cern.ch
[2025-04-13 00:44:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-13 00:44:50] 2.12.6.0 4946 18090 226720 144799 1 442 21174293 32935936 14228 130560 0 40950246 99.546 45733758 26122 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-13 00:44:50] CVMFS is ok
[2025-04-13 00:44:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-13 00:44:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-13 00:44:50] Further information can be found at the LHC@home message board.
[2025-04-13 00:44:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-13 00:44:50] Checking for apptainer binary...
[2025-04-13 00:44:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-13 00:44:50] Running /usr/bin/apptainer --version
[2025-04-13 00:44:50] apptainer version 1.4.0-1.el9
[2025-04-13 00:44:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-13 00:44:51] c6-6-39-2.aglt2.org
[2025-04-13 00:44:51] apptainer works
[2025-04-13 00:44:51] Set ATHENA_PROC_NUMBER=9
[2025-04-13 00:44:51] Set ATHENA_CORE_NUMBER=9
[2025-04-13 00:44:51] Starting ATLAS job with PandaID=6600505153
[2025-04-13 00:44:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-13 05:09:22]  *** The last 200 lines of the pilot log: ***
[2025-04-13 05:09:22] 2025-04-13 09:09:01,109 | INFO     | sum of deviations: 192747165139.68002
[2025-04-13 05:09:22] 2025-04-13 09:09:01,109 | INFO     | mean x: 1744527345.832
[2025-04-13 05:09:22] 2025-04-13 09:09:01,109 | INFO     | mean y: 2198110.04
[2025-04-13 05:09:22] 2025-04-13 09:09:01,109 | INFO     | -- intersect: -69400512292.40892
[2025-04-13 05:09:22] 2025-04-13 09:09:01,109 | INFO     | intersect: -69400512292.40892
[2025-04-13 05:09:22] 2025-04-13 09:09:01,110 | INFO     | chi2: 5.653480434402346
[2025-04-13 05:09:22] 2025-04-13 09:09:01,110 | INFO     | current chi2=5.653480434402346 (change=11.715249035082866 %)
[2025-04-13 05:09:22] 2025-04-13 09:09:01,110 | INFO     | right removable region: 249
[2025-04-13 05:09:22] 2025-04-13 09:09:01,110 | INFO     | sum of square deviations: 4844929573.599987
[2025-04-13 05:09:22] 2025-04-13 09:09:01,116 | INFO     | sum of deviations: 117913528223.80005
[2025-04-13 05:09:22] 2025-04-13 09:09:01,116 | INFO     | mean x: 1744527650.84
[2025-04-13 05:09:22] 2025-04-13 09:09:01,116 | INFO     | mean y: 2223147.72
[2025-04-13 05:09:22] 2025-04-13 09:09:01,116 | INFO     | -- intersect: -42455238260.05762
[2025-04-13 05:09:22] 2025-04-13 09:09:01,117 | INFO     | intersect: -42455238260.05762
[2025-04-13 05:09:22] 2025-04-13 09:09:01,117 | INFO     | chi2: 3.613901945264363
[2025-04-13 05:09:22] 2025-04-13 09:09:01,117 | INFO     | current chi2=3.613901945264363 (change=43.56530690230959 %)
[2025-04-13 05:09:22] 2025-04-13 09:09:01,117 | INFO     | sum of square deviations: 4559992625.199979
[2025-04-13 05:09:22] 2025-04-13 09:09:01,119 | INFO     | sum of deviations: 77740954707.02875
[2025-04-13 05:09:22] 2025-04-13 09:09:01,122 | INFO     | mean x: 1744527803.3428571
[2025-04-13 05:09:22] 2025-04-13 09:09:01,122 | INFO     | mean y: 2244635.2734693876
[2025-04-13 05:09:22] 2025-04-13 09:09:01,122 | INFO     | -- intersect: -29739307181.135826
[2025-04-13 05:09:22] 2025-04-13 09:09:01,122 | INFO     | intersect: -29739307181.135826
[2025-04-13 05:09:22] 2025-04-13 09:09:01,122 | INFO     | chi2: 2.571309492320045
[2025-04-13 05:09:22] 2025-04-13 09:09:01,122 | INFO     | current chi2=2.571309492320045 (change=28.84949477698268 %)
[2025-04-13 05:09:22] 2025-04-13 09:09:01,123 | INFO     | sum of square deviations: 4286436294.600002
[2025-04-13 05:09:22] 2025-04-13 09:09:01,124 | INFO     | sum of deviations: 43325177265.70002
[2025-04-13 05:09:22] 2025-04-13 09:09:01,129 | INFO     | mean x: 1744527955.85
[2025-04-13 05:09:22] 2025-04-13 09:09:01,129 | INFO     | mean y: 2263829.075
[2025-04-13 05:09:22] 2025-04-13 09:09:01,129 | INFO     | -- intersect: -17630561608.547337
[2025-04-13 05:09:22] 2025-04-13 09:09:01,129 | INFO     | intersect: -17630561608.547337
[2025-04-13 05:09:22] 2025-04-13 09:09:01,129 | INFO     | chi2: 1.7879232212822138
[2025-04-13 05:09:22] 2025-04-13 09:09:01,129 | INFO     | current chi2=1.7879232212822138 (change=30.466432507546813 %)
[2025-04-13 05:09:22] 2025-04-13 09:09:01,130 | INFO     | sum of square deviations: 4024057603.6850963
[2025-04-13 05:09:22] 2025-04-13 09:09:01,131 | INFO     | sum of deviations: 18046019509.67657
[2025-04-13 05:09:22] 2025-04-13 09:09:01,131 | INFO     | mean x: 1744528108.3531914
[2025-04-13 05:09:22] 2025-04-13 09:09:01,131 | INFO     | mean y: 2278475.4978723405
[2025-04-13 05:09:22] 2025-04-13 09:09:01,132 | INFO     | -- intersect: -7821115565.802853
[2025-04-13 05:09:22] 2025-04-13 09:09:01,132 | INFO     | intersect: -7821115565.802853
[2025-04-13 05:09:22] 2025-04-13 09:09:01,132 | INFO     | chi2: 1.3149953269681602
[2025-04-13 05:09:22] 2025-04-13 09:09:01,132 | INFO     | current chi2=1.3149953269681602 (change=26.451241791853462 %)
[2025-04-13 05:09:22] 2025-04-13 09:09:01,136 | INFO     | sum of square deviations: 3772609106.2652245
[2025-04-13 05:09:22] 2025-04-13 09:09:01,138 | INFO     | sum of deviations: 8733955927.352188
[2025-04-13 05:09:22] 2025-04-13 09:09:01,138 | INFO     | mean x: 1744528260.8565218
[2025-04-13 05:09:22] 2025-04-13 09:09:01,138 | INFO     | mean y: 2284079.4652173915
[2025-04-13 05:09:22] 2025-04-13 09:09:01,138 | INFO     | -- intersect: -4036468018.926724
[2025-04-13 05:09:22] 2025-04-13 09:09:01,138 | INFO     | intersect: -4036468018.926724
[2025-04-13 05:09:22] 2025-04-13 09:09:01,138 | INFO     | chi2: 1.2298778753923805
[2025-04-13 05:09:22] 2025-04-13 09:09:01,139 | INFO     | current chi2=1.2298778753923805 (change=6.472833007857578 %)
[2025-04-13 05:09:22] 2025-04-13 09:09:01,139 | INFO     | left removable region: 50
[2025-04-13 05:09:22] 2025-04-13 09:09:01,139 | INFO     | sum of square deviations: 2443470239.9497614
[2025-04-13 05:09:22] 2025-04-13 09:09:01,144 | INFO     | sum of deviations: -6298837896.29648
[2025-04-13 05:09:22] 2025-04-13 09:09:01,144 | INFO     | mean x: 1744528840.361809
[2025-04-13 05:09:22] 2025-04-13 09:09:01,144 | INFO     | mean y: 2314706.9346733666
[2025-04-13 05:09:22] 2025-04-13 09:09:01,144 | INFO     | -- intersect: 4499404211.523459
[2025-04-13 05:09:22] 2025-04-13 09:09:01,144 | INFO     | intersect: 4499404211.523459
[2025-04-13 05:09:22] 2025-04-13 09:09:01,145 | INFO     | chi2: 0.07710321270571019
[2025-04-13 05:09:22] 2025-04-13 09:09:01,145 | INFO     | -- intersect: 4499404211.523459
[2025-04-13 05:09:22] 2025-04-13 09:09:01,145 | INFO     | current memory leak: -2.58 B/s (using 199 data points, chi2=0.08)
[2025-04-13 05:09:22] 2025-04-13 09:09:01,146 | INFO     | ..............................
[2025-04-13 05:09:22] 2025-04-13 09:09:01,146 | INFO     | . Timing measurements:
[2025-04-13 05:09:22] 2025-04-13 09:09:01,146 | INFO     | . get job = 0 s
[2025-04-13 05:09:22] 2025-04-13 09:09:01,146 | INFO     | . initial setup = 7 s
[2025-04-13 05:09:22] 2025-04-13 09:09:01,146 | INFO     | . payload setup = 57 s
[2025-04-13 05:09:22] 2025-04-13 09:09:01,146 | INFO     | . stage-in = 0 s
[2025-04-13 05:09:22] 2025-04-13 09:09:01,146 | INFO     | . payload execution = 15575 s
[2025-04-13 05:09:22] 2025-04-13 09:09:01,146 | INFO     | . stage-out = 5 s
[2025-04-13 05:09:22] 2025-04-13 09:09:01,146 | INFO     | . log creation = 1 s
[2025-04-13 05:09:22] 2025-04-13 09:09:01,146 | INFO     | ..............................
[2025-04-13 05:09:22] 2025-04-13 09:09:01,727 | INFO     | 
[2025-04-13 05:09:22] 2025-04-13 09:09:01,727 | INFO     | job summary report
[2025-04-13 05:09:22] 2025-04-13 09:09:01,728 | INFO     | --------------------------------------------------
[2025-04-13 05:09:22] 2025-04-13 09:09:01,728 | INFO     | PanDA job id: 6600505153
[2025-04-13 05:09:22] 2025-04-13 09:09:01,728 | INFO     | task id: 44075164
[2025-04-13 05:09:22] 2025-04-13 09:09:01,728 | INFO     | errors: (none)
[2025-04-13 05:09:22] 2025-04-13 09:09:01,728 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-13 05:09:22] 2025-04-13 09:09:01,728 | INFO     | pilot state: finished 
[2025-04-13 05:09:22] 2025-04-13 09:09:01,728 | INFO     | transexitcode: 0
[2025-04-13 05:09:22] 2025-04-13 09:09:01,728 | INFO     | exeerrorcode: 0
[2025-04-13 05:09:22] 2025-04-13 09:09:01,728 | INFO     | exeerrordiag: 
[2025-04-13 05:09:22] 2025-04-13 09:09:01,728 | INFO     | exitcode: 0
[2025-04-13 05:09:22] 2025-04-13 09:09:01,728 | INFO     | exitmsg: OK
[2025-04-13 05:09:22] 2025-04-13 09:09:01,728 | INFO     | cpuconsumptiontime: 42763 s
[2025-04-13 05:09:22] 2025-04-13 09:09:01,728 | INFO     | nevents: 400
[2025-04-13 05:09:22] 2025-04-13 09:09:01,728 | INFO     | neventsw: 0
[2025-04-13 05:09:22] 2025-04-13 09:09:01,729 | INFO     | pid: 1790955
[2025-04-13 05:09:22] 2025-04-13 09:09:01,729 | INFO     | pgrp: 1790955
[2025-04-13 05:09:22] 2025-04-13 09:09:01,729 | INFO     | corecount: 9
[2025-04-13 05:09:22] 2025-04-13 09:09:01,729 | INFO     | event service: False
[2025-04-13 05:09:22] 2025-04-13 09:09:01,729 | INFO     | sizes: {0: 2417100, 1: 2417184, 2: 2417383, 12: 2417383, 23: 2417411, 35: 2417439, 40: 2417801, 46: 2417829, 15637: 2448756, 15644: 2457697, 15648: 2457753, 15682:
[2025-04-13 05:09:22] 2025-04-13 09:09:01,729 | INFO     | --------------------------------------------------
[2025-04-13 05:09:22] 2025-04-13 09:09:01,729 | INFO     | 
[2025-04-13 05:09:22] 2025-04-13 09:09:01,729 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-13 05:09:22] 2025-04-13 09:09:01,947 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-13 05:09:22] 2025-04-13 09:09:01,949 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-13 05:09:22] 2025-04-13 09:09:01,949 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-13 05:09:22] 2025-04-13 09:09:01,949 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-13 05:09:22] 2025-04-13 09:09:01,949 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-13 05:09:22] 2025-04-13 09:09:01,949 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-13 05:09:22] 2025-04-13 09:09:01,949 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-13 05:09:22] 2025-04-13 09:09:01,949 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-13 05:09:22] 2025-04-13 09:09:01,949 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-13 05:09:22] 2025-04-13 09:09:01,950 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-13 05:09:22] 2025-04-13 09:09:01,950 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-13 05:09:22] 2025-04-13 09:09:01,950 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-13 05:09:22] 2025-04-13 09:09:01,950 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-13 05:09:22] 2025-04-13 09:09:01,950 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-13 05:09:22] 2025-04-13 09:09:01,950 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-13 05:09:22] 2025-04-13 09:09:01,950 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-13 05:09:22] 2025-04-13 09:09:01,950 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-13 05:09:22] 2025-04-13 09:09:01,950 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-13 05:09:22] 2025-04-13 09:09:01,950 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-13 05:09:22] 2025-04-13 09:09:01,950 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-13 05:09:22] 2025-04-13 09:09:01,951 | INFO     | job 6600505153 has completed (purged errors)
[2025-04-13 05:09:22] 2025-04-13 09:09:01,951 | INFO     | overall cleanup function is called
[2025-04-13 05:09:22] 2025-04-13 09:09:02,981 | INFO     | --- collectZombieJob: --- 10, [1790955]
[2025-04-13 05:09:22] 2025-04-13 09:09:02,981 | INFO     | zombie collector waiting for pid 1790955
[2025-04-13 05:09:22] 2025-04-13 09:09:02,982 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-13 05:09:22] 2025-04-13 09:09:02,982 | INFO     | collected zombie processes
[2025-04-13 05:09:22] 2025-04-13 09:09:02,982 | INFO     | will attempt to kill all subprocesses of pid=1790955
[2025-04-13 05:09:22] 2025-04-13 09:09:04,131 | INFO     | process IDs to be killed: [1790955] (in reverse order)
[2025-04-13 05:09:22] 2025-04-13 09:09:05,174 | WARNING  | found no corresponding commands to process id(s)
[2025-04-13 05:09:22] 2025-04-13 09:09:05,175 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-13 05:09:22] 2025-04-13 09:09:05,268 | INFO     | did not find any defunct processes belonging to 1790955
[2025-04-13 05:09:22] 2025-04-13 09:09:05,294 | INFO     | did not find any defunct processes belonging to 1790955
[2025-04-13 05:09:22] 2025-04-13 09:09:05,294 | INFO     | ready for new job
[2025-04-13 05:09:22] 2025-04-13 09:09:05,294 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-13 05:09:22] 2025-04-13 09:09:05,301 | INFO     | **************************************
[2025-04-13 05:09:22] 2025-04-13 09:09:05,301 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-13 05:09:22] 2025-04-13 09:09:05,305 | INFO     | **************************************
[2025-04-13 05:09:22] 2025-04-13 09:09:05,306 | INFO     | 
[2025-04-13 05:09:22] 2025-04-13 09:09:05,320 | INFO     | architecture information:
[2025-04-13 05:09:22] 2025-04-13 09:09:05,325 | INFO     | executing command: cat /etc/os-release
[2025-04-13 05:09:22] 2025-04-13 09:09:05,472 | INFO     | cat /etc/os-release:
[2025-04-13 05:09:22] NAME="CentOS Linux"
[2025-04-13 05:09:22] VERSION="7 (Core)"
[2025-04-13 05:09:22] ID="centos"
[2025-04-13 05:09:22] ID_LIKE="rhel fedora"
[2025-04-13 05:09:22] VERSION_ID="7"
[2025-04-13 05:09:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-13 05:09:22] ANSI_COLOR="0;31"
[2025-04-13 05:09:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-13 05:09:22] HOME_URL="https://www.centos.org/"
[2025-04-13 05:09:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-13 05:09:22] 
[2025-04-13 05:09:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-13 05:09:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-13 05:09:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-13 05:09:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-13 05:09:22] 
[2025-04-13 05:09:22] 2025-04-13 09:09:05,473 | INFO     | **************************************
[2025-04-13 05:09:22] 2025-04-13 09:09:05,976 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-13 05:09:22] 2025-04-13 09:09:06,207 | INFO     | sufficient remaining disk space (75240570880 B)
[2025-04-13 05:09:22] 2025-04-13 09:09:06,207 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-13 05:09:22] 2025-04-13 09:09:06,207 | INFO     | current server update state: UPDATING_FINAL
[2025-04-13 05:09:22] 2025-04-13 09:09:06,207 | INFO     | update_server=False
[2025-04-13 05:09:22] 2025-04-13 09:09:06,207 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-13 05:09:22] 2025-04-13 09:09:06,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-13 05:09:22] 2025-04-13 09:09:06,211 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-13 05:09:22] 2025-04-13 09:09:06,212 | INFO     | aborting loop
[2025-04-13 05:09:22] 2025-04-13 09:09:06,408 | INFO     | all job control threads have been joined
[2025-04-13 05:09:22] 2025-04-13 09:09:06,491 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-13 05:09:22] 2025-04-13 09:09:06,954 | INFO     | all payload control threads have been joined
[2025-04-13 05:09:22] 2025-04-13 09:09:07,012 | INFO     | found 0 job(s) in 20 queues
[2025-04-13 05:09:22] 2025-04-13 09:09:07,013 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-13 05:09:22] 2025-04-13 09:09:07,013 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-13 05:09:22] 2025-04-13 09:09:07,109 | INFO     | all data control threads have been joined
[2025-04-13 05:09:22] 2025-04-13 09:09:07,213 | INFO     | [job] retrieve thread has finished
[2025-04-13 05:09:22] 2025-04-13 09:09:07,217 | INFO     | [job] job monitor thread has finished
[2025-04-13 05:09:22] 2025-04-13 09:09:07,387 | INFO     | [data] copytool_in thread has finished
[2025-04-13 05:09:22] 2025-04-13 09:09:07,393 | INFO     | [payload] execute_payloads thread has finished
[2025-04-13 05:09:22] 2025-04-13 09:09:07,414 | INFO     | [job] control thread has finished
[2025-04-13 05:09:22] 2025-04-13 09:09:07,496 | INFO     | [job] queue monitor thread has finished
[2025-04-13 05:09:22] 2025-04-13 09:09:07,531 | INFO     | [job] create_data_payload thread has finished
[2025-04-13 05:09:22] 2025-04-13 09:09:07,858 | INFO     | [payload] validate_post thread has finished
[2025-04-13 05:09:22] 2025-04-13 09:09:07,960 | INFO     | [payload] control thread has finished
[2025-04-13 05:09:22] 2025-04-13 09:09:08,115 | INFO     | [data] control thread has finished
[2025-04-13 05:09:22] 2025-04-13 09:09:08,215 | INFO     | [data] copytool_out thread has finished
[2025-04-13 05:09:22] 2025-04-13 09:09:08,241 | INFO     | [payload] validate_pre thread has finished
[2025-04-13 05:09:22] 2025-04-13 09:09:08,247 | INFO     | [job] validate thread has finished
[2025-04-13 05:09:22] 2025-04-13 09:09:08,438 | INFO     | [payload] failed_post thread has finished
[2025-04-13 05:09:22] 2025-04-13 09:09:08,505 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-13 05:09:22] 2025-04-13 09:09:08,763 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-13 05:09:22] 2025-04-13 09:09:12,772 | INFO     | [data] queue_monitor thread has finished
[2025-04-13 05:09:22] 2025-04-13 09:09:14,476 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140642468300608)>', '<ExcThread(monitor, started 140641967261440)>']
[2025-04-13 05:09:22] 2025-04-13 09:09:15,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-13 05:09:22] 2025-04-13 09:09:15,108 | INFO     | [monitor] control thread has ended
[2025-04-13 05:09:22] 2025-04-13 09:09:19,502 | INFO     | all workflow threads have been joined
[2025-04-13 05:09:22] 2025-04-13 09:09:19,503 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-13 05:09:22] 2025-04-13 09:09:19,503 | INFO     | traces error code: 0
[2025-04-13 05:09:22] 2025-04-13 09:09:19,503 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-13 05:09:22] 2025-04-13 09:09:21,330 [wrapper] ==== pilot stdout END ====
[2025-04-13 05:09:22] 2025-04-13 09:09:21,356 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-13 05:09:22] 2025-04-13 09:09:21,372 [wrapper] pilotpid: 1777763
[2025-04-13 05:09:22] 2025-04-13 09:09:21,386 [wrapper] Pilot exit status: 0
[2025-04-13 05:09:22] 2025-04-13 09:09:21,705 [wrapper] pandaids: 6600505153
[2025-04-13 05:09:22] 2025-04-13 09:09:21,873 [wrapper] cleanup supervisor_pilot 2684210 1777764
[2025-04-13 05:09:22] 2025-04-13 09:09:21,887 [wrapper] Test setup, not cleaning
[2025-04-13 05:09:22] 2025-04-13 09:09:21,951 [wrapper] apfmon messages muted
[2025-04-13 05:09:22] 2025-04-13 09:09:21,967 [wrapper] ==== wrapper stdout END ====
[2025-04-13 05:09:22] 2025-04-13 09:09:21,970 [wrapper] ==== wrapper stderr END ====
[2025-04-13 05:09:22]  *** Error codes and diagnostics ***
[2025-04-13 05:09:22]     "exeErrorCode": 0,
[2025-04-13 05:09:22]     "exeErrorDiag": "",
[2025-04-13 05:09:22]     "pilotErrorCode": 0,
[2025-04-13 05:09:22]     "pilotErrorDiag": "",
[2025-04-13 05:09:22]  *** Listing of results directory ***
[2025-04-13 05:09:22] total 408748
[2025-04-13 05:09:22] -rw-r--r--. 1 boincer umatlas    495897 Apr 12 15:19 pilot3.tar.gz
[2025-04-13 05:09:22] -rw-r--r--. 1 boincer umatlas      5111 Apr 12 15:30 queuedata.json
[2025-04-13 05:09:22] -rwx------. 1 boincer umatlas     37140 Apr 12 15:32 runpilot2-wrapper.sh
[2025-04-13 05:09:22] -rw-r--r--. 1 boincer umatlas       100 Apr 13 00:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-13 05:09:22] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 13 00:44 run_atlas
[2025-04-13 05:09:22] -rw-r--r--. 1 boincer umatlas       105 Apr 13 00:44 job.xml
[2025-04-13 05:09:22] -rw-r--r--. 2 boincer umatlas 220550902 Apr 13 00:44 EVNT.44075162._001872.pool.root.1
[2025-04-13 05:09:22] -rw-r--r--. 2 boincer umatlas     17569 Apr 13 00:44 start_atlas.sh
[2025-04-13 05:09:22] drwxrwx--x. 2 boincer umatlas      4096 Apr 13 00:44 shared
[2025-04-13 05:09:22] -rw-r--r--. 2 boincer umatlas    508883 Apr 13 00:44 input.tar.gz
[2025-04-13 05:09:22] -rw-r--r--. 1 boincer umatlas         0 Apr 13 00:44 boinc_lockfile
[2025-04-13 05:09:22] -rw-r--r--. 1 boincer umatlas      2550 Apr 13 00:44 pandaJob.out
[2025-04-13 05:09:22] -rw-------. 1 boincer umatlas       467 Apr 13 00:44 setup.sh.local
[2025-04-13 05:09:22] -rw-------. 1 boincer umatlas    985800 Apr 13 00:46 agis_schedconf.cvmfs.json
[2025-04-13 05:09:22] drwx------. 4 boincer umatlas      4096 Apr 13 00:46 pilot3
[2025-04-13 05:09:22] -rw-------. 1 boincer umatlas 190679831 Apr 13 05:06 HITS.44075164._048107.pool.root.1
[2025-04-13 05:09:22] -rw-r--r--. 1 boincer umatlas       530 Apr 13 05:07 boinc_task_state.xml
[2025-04-13 05:09:22] -rw-------. 1 boincer umatlas      1065 Apr 13 05:08 memory_monitor_summary.json
[2025-04-13 05:09:22] -rw-------. 1 boincer umatlas   1603529 Apr 13 05:08 agis_ddmendpoints.agis.ALL.json
[2025-04-13 05:09:22] -rw-------. 1 boincer umatlas    424691 Apr 13 05:08 log.44075164._048107.job.log.tgz.1
[2025-04-13 05:09:22] -rw-------. 1 boincer umatlas      7740 Apr 13 05:09 heartbeat.json
[2025-04-13 05:09:22] -rw-r--r--. 1 boincer umatlas      6839 Apr 13 05:09 init_data.xml
[2025-04-13 05:09:22] -rw-------. 1 boincer umatlas        95 Apr 13 05:09 pilot_heartbeat.json
[2025-04-13 05:09:22] -rw-------. 1 boincer umatlas      4353 Apr 13 05:09 pilotlog.txt
[2025-04-13 05:09:22] -rw-r--r--. 1 boincer umatlas      8192 Apr 13 05:09 boinc_mmap_file
[2025-04-13 05:09:22] -rw-r--r--. 1 boincer umatlas        28 Apr 13 05:09 wrapper_checkpoint.txt
[2025-04-13 05:09:22] -rw-------. 1 boincer umatlas   1317292 Apr 13 05:09 log.44075164._048107.job.log.1
[2025-04-13 05:09:22] -rw-------. 1 boincer umatlas       357 Apr 13 05:09 output.list
[2025-04-13 05:09:22] -rw-r--r--. 1 boincer umatlas       620 Apr 13 05:09 runtime_log
[2025-04-13 05:09:22] -rw-------. 1 boincer umatlas   1761280 Apr 13 05:09 result.tar.gz
[2025-04-13 05:09:22] -rw-r--r--. 1 boincer umatlas     11424 Apr 13 05:09 runtime_log.err
[2025-04-13 05:09:22] -rw-------. 1 boincer umatlas       660 Apr 13 05:09 9MaNDmylvN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmYASLDmBngoan.diag
[2025-04-13 05:09:22] -rw-r--r--. 1 boincer umatlas     20829 Apr 13 05:09 stderr.txt
[2025-04-13 05:09:23] HITS file was successfully produced:
[2025-04-13 05:09:23] -rw-------. 1 boincer umatlas 190679831 Apr 13 05:06 shared/HITS.pool.root.1
[2025-04-13 05:09:23]  *** Contents of shared directory: ***
[2025-04-13 05:09:23] total 403844
[2025-04-13 05:09:23] -rw-r--r--. 2 boincer umatlas 220550902 Apr 13 00:44 ATLAS.root_0
[2025-04-13 05:09:23] -rw-r--r--. 2 boincer umatlas     17569 Apr 13 00:44 start_atlas.sh
[2025-04-13 05:09:23] -rw-r--r--. 2 boincer umatlas    508883 Apr 13 00:44 input.tar.gz
[2025-04-13 05:09:23] -rw-------. 1 boincer umatlas 190679831 Apr 13 05:06 HITS.pool.root.1
[2025-04-13 05:09:23] -rw-------. 1 boincer umatlas   1761280 Apr 13 05:09 result.tar.gz
05:09:24 (1772921): run_atlas exited; CPU time 43219.675890
05:09:24 (1772921): called boinc_finish(0)

</stderr_txt>
]]>

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