Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
05:35:38 (3039860): wrapper (7.7.26015): starting
05:35:38 (3039860): wrapper: running run_atlas (--nthreads 12)
[2025-04-13 05:35:38] Arguments: --nthreads 12
[2025-04-13 05:35:38] Threads: 12
[2025-04-13 05:35:38] Checking for CVMFS
[2025-04-13 05:35:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-13 05:35:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-13 05:35:39] Running cvmfs_config stat atlas.cern.ch
[2025-04-13 05:35:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-13 05:35:41] 2.12.6.0 4038419 2937 94348 144800 1 60 2433361 4096000 14934 130560 0 17741873 99.999 365562 1129 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-13 05:35:41] CVMFS is ok
[2025-04-13 05:35:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-13 05:35:41] Checking for apptainer binary...
[2025-04-13 05:35:41] apptainer is not installed, using version from CVMFS
[2025-04-13 05:35:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-13 05:35:44] epyc7v12
[2025-04-13 05:35:44] apptainer works
[2025-04-13 05:35:44] Set ATHENA_PROC_NUMBER=12
[2025-04-13 05:35:44] Set ATHENA_CORE_NUMBER=12
[2025-04-13 05:35:45] Starting ATLAS job with PandaID=6600503189
[2025-04-13 05:35:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-13 07:56:21]  *** The last 200 lines of the pilot log: ***
[2025-04-13 07:56:21] 2025-04-13 07:56:00,524 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/3/PanDA_Pilot-6600503189/memory_monitor_summary.json (trf name=prmon)
[2025-04-13 07:56:21] 2025-04-13 07:56:00,525 | INFO     | extracted standard info from prmon json
[2025-04-13 07:56:21] 2025-04-13 07:56:00,525 | INFO     | extracted standard memory fields from prmon json
[2025-04-13 07:56:21] 2025-04-13 07:56:00,525 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-13 07:56:21] 2025-04-13 07:56:00,526 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-13 07:56:21] 2025-04-13 07:56:00,526 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-13 07:56:21] 2025-04-13 07:56:00,529 | INFO     | fitting pss+swap vs Time
[2025-04-13 07:56:21] 2025-04-13 07:56:00,529 | INFO     | sum of square deviations: 713127398.7272751
[2025-04-13 07:56:21] 2025-04-13 07:56:00,530 | INFO     | sum of deviations: 70678063478.81819
[2025-04-13 07:56:21] 2025-04-13 07:56:00,530 | INFO     | mean x: 1744526822.5454545
[2025-04-13 07:56:21] 2025-04-13 07:56:00,530 | INFO     | mean y: 2476674.7803030303
[2025-04-13 07:56:21] 2025-04-13 07:56:00,530 | INFO     | -- intersect: -172897593809.71216
[2025-04-13 07:56:21] 2025-04-13 07:56:00,530 | INFO     | intersect: -172897593809.71216
[2025-04-13 07:56:21] 2025-04-13 07:56:00,531 | INFO     | chi2: 5.977988418479992
[2025-04-13 07:56:21] 2025-04-13 07:56:00,535 | INFO     | sum of square deviations: 635118463.7165364
[2025-04-13 07:56:21] 2025-04-13 07:56:00,536 | INFO     | sum of deviations: 76821486531.38585
[2025-04-13 07:56:21] 2025-04-13 07:56:00,536 | INFO     | mean x: 1744526670.047244
[2025-04-13 07:56:21] 2025-04-13 07:56:00,536 | INFO     | mean y: 2488114.102362205
[2025-04-13 07:56:21] 2025-04-13 07:56:00,536 | INFO     | -- intersect: -211008747966.8751
[2025-04-13 07:56:21] 2025-04-13 07:56:00,536 | INFO     | intersect: -211008747966.8751
[2025-04-13 07:56:21] 2025-04-13 07:56:00,536 | INFO     | chi2: 5.173234931175517
[2025-04-13 07:56:21] 2025-04-13 07:56:00,537 | INFO     | current chi2=5.173234931175517 (change=13.461944570128448 %)
[2025-04-13 07:56:21] 2025-04-13 07:56:00,537 | INFO     | right removable region: 126
[2025-04-13 07:56:21] 2025-04-13 07:56:00,537 | INFO     | sum of square deviations: 635114803.7165364
[2025-04-13 07:56:21] 2025-04-13 07:56:00,538 | INFO     | sum of deviations: 34045451446.039375
[2025-04-13 07:56:21] 2025-04-13 07:56:00,538 | INFO     | mean x: 1744526975.047244
[2025-04-13 07:56:21] 2025-04-13 07:56:00,538 | INFO     | mean y: 2548054.8267716537
[2025-04-13 07:56:21] 2025-04-13 07:56:00,538 | INFO     | -- intersect: -93513156629.93633
[2025-04-13 07:56:21] 2025-04-13 07:56:00,538 | INFO     | intersect: -93513156629.93633
[2025-04-13 07:56:21] 2025-04-13 07:56:00,538 | INFO     | chi2: 2.958169928703917
[2025-04-13 07:56:21] 2025-04-13 07:56:00,538 | INFO     | current chi2=2.958169928703917 (change=50.5156296462668 %)
[2025-04-13 07:56:21] 2025-04-13 07:56:00,543 | INFO     | sum of square deviations: 563009296.2049179
[2025-04-13 07:56:21] 2025-04-13 07:56:00,543 | INFO     | sum of deviations: 4166694920.713108
[2025-04-13 07:56:21] 2025-04-13 07:56:00,544 | INFO     | mean x: 1744527127.5491803
[2025-04-13 07:56:21] 2025-04-13 07:56:00,544 | INFO     | mean y: 2611273.631147541
[2025-04-13 07:56:21] 2025-04-13 07:56:00,544 | INFO     | -- intersect: -12908209862.72135
[2025-04-13 07:56:21] 2025-04-13 07:56:00,544 | INFO     | intersect: -12908209862.72135
[2025-04-13 07:56:21] 2025-04-13 07:56:00,544 | INFO     | chi2: 1.1043846009455593
[2025-04-13 07:56:21] 2025-04-13 07:56:00,544 | INFO     | current chi2=1.1043846009455593 (change=62.66662742294082 %)
[2025-04-13 07:56:21] 2025-04-13 07:56:00,544 | INFO     | sum of square deviations: 496578313.69230723
[2025-04-13 07:56:21] 2025-04-13 07:56:00,545 | INFO     | sum of deviations: -5843548504.435898
[2025-04-13 07:56:21] 2025-04-13 07:56:00,545 | INFO     | mean x: 1744527280.0512822
[2025-04-13 07:56:21] 2025-04-13 07:56:00,545 | INFO     | mean y: 2633983.2393162395
[2025-04-13 07:56:21] 2025-04-13 07:56:00,545 | INFO     | -- intersect: 20531580772.0995
[2025-04-13 07:56:21] 2025-04-13 07:56:00,546 | INFO     | intersect: 20531580772.0995
[2025-04-13 07:56:21] 2025-04-13 07:56:00,546 | INFO     | chi2: 0.841973581787971
[2025-04-13 07:56:21] 2025-04-13 07:56:00,546 | INFO     | current chi2=0.841973581787971 (change=23.76083648150432 %)
[2025-04-13 07:56:21] 2025-04-13 07:56:00,546 | INFO     | left removable region: 30
[2025-04-13 07:56:21] 2025-04-13 07:56:00,546 | INFO     | sum of square deviations: 274309865.90625
[2025-04-13 07:56:21] 2025-04-13 07:56:00,551 | INFO     | sum of deviations: 1703588390.6250002
[2025-04-13 07:56:21] 2025-04-13 07:56:00,551 | INFO     | mean x: 1744527554.53125
[2025-04-13 07:56:21] 2025-04-13 07:56:00,551 | INFO     | mean y: 2655839.7916666665
[2025-04-13 07:56:21] 2025-04-13 07:56:00,551 | INFO     | -- intersect: -10831649660.69141
[2025-04-13 07:56:21] 2025-04-13 07:56:00,551 | INFO     | intersect: -10831649660.69141
[2025-04-13 07:56:21] 2025-04-13 07:56:00,551 | INFO     | chi2: 0.0002057243143645653
[2025-04-13 07:56:21] 2025-04-13 07:56:00,551 | INFO     | -- intersect: -10831649660.69141
[2025-04-13 07:56:21] 2025-04-13 07:56:00,552 | INFO     | current memory leak: 6.21 B/s (using 96 data points, chi2=0.00)
[2025-04-13 07:56:21] 2025-04-13 07:56:00,552 | INFO     | ..............................
[2025-04-13 07:56:21] 2025-04-13 07:56:00,552 | INFO     | . Timing measurements:
[2025-04-13 07:56:21] 2025-04-13 07:56:00,552 | INFO     | . get job = 0 s
[2025-04-13 07:56:21] 2025-04-13 07:56:00,552 | INFO     | . initial setup = 8 s
[2025-04-13 07:56:21] 2025-04-13 07:56:00,553 | INFO     | . payload setup = 28 s
[2025-04-13 07:56:21] 2025-04-13 07:56:00,553 | INFO     | . stage-in = 0 s
[2025-04-13 07:56:21] 2025-04-13 07:56:00,553 | INFO     | . payload execution = 8059 s
[2025-04-13 07:56:21] 2025-04-13 07:56:00,553 | INFO     | . stage-out = 2 s
[2025-04-13 07:56:21] 2025-04-13 07:56:00,553 | INFO     | . log creation = 1 s
[2025-04-13 07:56:21] 2025-04-13 07:56:00,553 | INFO     | ..............................
[2025-04-13 07:56:21] 2025-04-13 07:56:01,009 | INFO     | 
[2025-04-13 07:56:21] 2025-04-13 07:56:01,010 | INFO     | job summary report
[2025-04-13 07:56:21] 2025-04-13 07:56:01,010 | INFO     | --------------------------------------------------
[2025-04-13 07:56:21] 2025-04-13 07:56:01,010 | INFO     | PanDA job id: 6600503189
[2025-04-13 07:56:21] 2025-04-13 07:56:01,010 | INFO     | task id: 44075164
[2025-04-13 07:56:21] 2025-04-13 07:56:01,010 | INFO     | errors: (none)
[2025-04-13 07:56:21] 2025-04-13 07:56:01,010 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-13 07:56:21] 2025-04-13 07:56:01,010 | INFO     | pilot state: finished 
[2025-04-13 07:56:21] 2025-04-13 07:56:01,010 | INFO     | transexitcode: 0
[2025-04-13 07:56:21] 2025-04-13 07:56:01,011 | INFO     | exeerrorcode: 0
[2025-04-13 07:56:21] 2025-04-13 07:56:01,019 | INFO     | exeerrordiag: 
[2025-04-13 07:56:21] 2025-04-13 07:56:01,019 | INFO     | exitcode: 0
[2025-04-13 07:56:21] 2025-04-13 07:56:01,019 | INFO     | exitmsg: OK
[2025-04-13 07:56:21] 2025-04-13 07:56:01,019 | INFO     | cpuconsumptiontime: 45438 s
[2025-04-13 07:56:21] 2025-04-13 07:56:01,019 | INFO     | nevents: 400
[2025-04-13 07:56:21] 2025-04-13 07:56:01,019 | INFO     | neventsw: 0
[2025-04-13 07:56:21] 2025-04-13 07:56:01,020 | INFO     | pid: 3111888
[2025-04-13 07:56:21] 2025-04-13 07:56:01,020 | INFO     | pgrp: 3111888
[2025-04-13 07:56:21] 2025-04-13 07:56:01,020 | INFO     | corecount: 12
[2025-04-13 07:56:21] 2025-04-13 07:56:01,020 | INFO     | event service: False
[2025-04-13 07:56:21] 2025-04-13 07:56:01,020 | INFO     | sizes: {0: 2417122, 1: 2417377, 2: 2417377, 12: 2417405, 23: 2417433, 34: 2417461, 45: 2417617, 55: 2417879, 66: 2417879, 8091: 2445591, 8095: 2454578, 8096: 24549
[2025-04-13 07:56:21] 2025-04-13 07:56:01,020 | INFO     | --------------------------------------------------
[2025-04-13 07:56:21] 2025-04-13 07:56:01,020 | INFO     | 
[2025-04-13 07:56:21] 2025-04-13 07:56:01,020 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/3
[2025-04-13 07:56:21] 2025-04-13 07:56:01,548 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-13 07:56:21] 2025-04-13 07:56:01,550 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-13 07:56:21] 2025-04-13 07:56:01,550 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-13 07:56:21] 2025-04-13 07:56:01,550 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-13 07:56:21] 2025-04-13 07:56:01,550 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-13 07:56:21] 2025-04-13 07:56:01,551 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-13 07:56:21] 2025-04-13 07:56:01,551 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-13 07:56:21] 2025-04-13 07:56:01,551 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-13 07:56:21] 2025-04-13 07:56:01,551 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-13 07:56:21] 2025-04-13 07:56:01,551 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-13 07:56:21] 2025-04-13 07:56:01,551 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-13 07:56:21] 2025-04-13 07:56:01,551 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-13 07:56:21] 2025-04-13 07:56:01,551 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-13 07:56:21] 2025-04-13 07:56:01,551 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-13 07:56:21] 2025-04-13 07:56:01,551 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-13 07:56:21] 2025-04-13 07:56:01,552 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-13 07:56:21] 2025-04-13 07:56:01,552 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-13 07:56:21] 2025-04-13 07:56:01,552 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-13 07:56:21] 2025-04-13 07:56:01,552 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-13 07:56:21] 2025-04-13 07:56:01,552 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-13 07:56:21] 2025-04-13 07:56:01,552 | INFO     | job 6600503189 has completed (purged errors)
[2025-04-13 07:56:21] 2025-04-13 07:56:01,552 | INFO     | overall cleanup function is called
[2025-04-13 07:56:21] 2025-04-13 07:56:02,567 | INFO     | --- collectZombieJob: --- 10, [3111888]
[2025-04-13 07:56:21] 2025-04-13 07:56:02,567 | INFO     | zombie collector waiting for pid 3111888
[2025-04-13 07:56:21] 2025-04-13 07:56:02,567 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-13 07:56:21] 2025-04-13 07:56:02,567 | INFO     | collected zombie processes
[2025-04-13 07:56:21] 2025-04-13 07:56:02,567 | INFO     | will attempt to kill all subprocesses of pid=3111888
[2025-04-13 07:56:21] 2025-04-13 07:56:03,783 | INFO     | process IDs to be killed: [3111888] (in reverse order)
[2025-04-13 07:56:21] 2025-04-13 07:56:07,115 | WARNING  | found no corresponding commands to process id(s)
[2025-04-13 07:56:21] 2025-04-13 07:56:07,119 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-13 07:56:21] 2025-04-13 07:56:07,153 | INFO     | did not find any defunct processes belonging to 3111888
[2025-04-13 07:56:21] 2025-04-13 07:56:07,196 | INFO     | did not find any defunct processes belonging to 3111888
[2025-04-13 07:56:21] 2025-04-13 07:56:07,196 | INFO     | ready for new job
[2025-04-13 07:56:21] 2025-04-13 07:56:07,196 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-13 07:56:21] 2025-04-13 07:56:07,198 | INFO     | **************************************
[2025-04-13 07:56:21] 2025-04-13 07:56:07,198 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-13 07:56:21] 2025-04-13 07:56:07,198 | INFO     | **************************************
[2025-04-13 07:56:21] 2025-04-13 07:56:07,198 | INFO     | 
[2025-04-13 07:56:21] 2025-04-13 07:56:07,241 | INFO     | architecture information:
[2025-04-13 07:56:21] 2025-04-13 07:56:07,247 | INFO     | executing command: cat /etc/os-release
[2025-04-13 07:56:21] 2025-04-13 07:56:07,439 | INFO     | cat /etc/os-release:
[2025-04-13 07:56:21] NAME="CentOS Linux"
[2025-04-13 07:56:21] VERSION="7 (Core)"
[2025-04-13 07:56:21] ID="centos"
[2025-04-13 07:56:21] ID_LIKE="rhel fedora"
[2025-04-13 07:56:21] VERSION_ID="7"
[2025-04-13 07:56:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-13 07:56:21] ANSI_COLOR="0;31"
[2025-04-13 07:56:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-13 07:56:21] HOME_URL="https://www.centos.org/"
[2025-04-13 07:56:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-13 07:56:21] 
[2025-04-13 07:56:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-13 07:56:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-13 07:56:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-13 07:56:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-13 07:56:21] 
[2025-04-13 07:56:21] 2025-04-13 07:56:07,440 | INFO     | **************************************
[2025-04-13 07:56:21] 2025-04-13 07:56:07,943 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/3
[2025-04-13 07:56:21] 2025-04-13 07:56:08,115 | INFO     | sufficient remaining disk space (318034149376 B)
[2025-04-13 07:56:21] 2025-04-13 07:56:08,116 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-13 07:56:21] 2025-04-13 07:56:08,116 | INFO     | current server update state: UPDATING_FINAL
[2025-04-13 07:56:21] 2025-04-13 07:56:08,116 | INFO     | update_server=False
[2025-04-13 07:56:21] 2025-04-13 07:56:08,116 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-13 07:56:21] 2025-04-13 07:56:08,117 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-13 07:56:21] 2025-04-13 07:56:08,117 | INFO     | found 0 job(s) in 20 queues
[2025-04-13 07:56:21] 2025-04-13 07:56:08,118 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-13 07:56:21] 2025-04-13 07:56:08,118 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-13 07:56:21] 2025-04-13 07:56:08,119 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-13 07:56:21] 2025-04-13 07:56:08,123 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-13 07:56:21] 2025-04-13 07:56:08,123 | INFO     | aborting loop
[2025-04-13 07:56:21] 2025-04-13 07:56:08,471 | INFO     | all data control threads have been joined
[2025-04-13 07:56:21] 2025-04-13 07:56:08,683 | INFO     | all job control threads have been joined
[2025-04-13 07:56:21] 2025-04-13 07:56:09,123 | INFO     | [job] retrieve thread has finished
[2025-04-13 07:56:21] 2025-04-13 07:56:09,131 | INFO     | [job] job monitor thread has finished
[2025-04-13 07:56:21] 2025-04-13 07:56:09,151 | INFO     | all payload control threads have been joined
[2025-04-13 07:56:21] 2025-04-13 07:56:09,223 | INFO     | [payload] failed_post thread has finished
[2025-04-13 07:56:21] 2025-04-13 07:56:09,347 | INFO     | [payload] validate_post thread has finished
[2025-04-13 07:56:21] 2025-04-13 07:56:09,407 | INFO     | [payload] execute_payloads thread has finished
[2025-04-13 07:56:21] 2025-04-13 07:56:09,431 | INFO     | [data] copytool_in thread has finished
[2025-04-13 07:56:21] 2025-04-13 07:56:09,467 | INFO     | [job] create_data_payload thread has finished
[2025-04-13 07:56:21] 2025-04-13 07:56:09,475 | INFO     | [data] control thread has finished
[2025-04-13 07:56:21] 2025-04-13 07:56:09,691 | INFO     | [job] control thread has finished
[2025-04-13 07:56:21] 2025-04-13 07:56:09,723 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-13 07:56:21] 2025-04-13 07:56:09,851 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-13 07:56:21] 2025-04-13 07:56:10,135 | INFO     | [data] copytool_out thread has finished
[2025-04-13 07:56:21] 2025-04-13 07:56:10,159 | INFO     | [payload] control thread has finished
[2025-04-13 07:56:21] 2025-04-13 07:56:10,367 | INFO     | [job] validate thread has finished
[2025-04-13 07:56:21] 2025-04-13 07:56:10,383 | INFO     | [payload] validate_pre thread has finished
[2025-04-13 07:56:21] 2025-04-13 07:56:10,669 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-13 07:56:21] 2025-04-13 07:56:10,728 | INFO     | [job] queue monitor thread has finished
[2025-04-13 07:56:21] 2025-04-13 07:56:14,675 | INFO     | [data] queue_monitor thread has finished
[2025-04-13 07:56:21] 2025-04-13 07:56:15,055 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140417725032256)>', '<ExcThread(monitor, started 140417286784768)>']
[2025-04-13 07:56:21] 2025-04-13 07:56:15,163 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-13 07:56:21] 2025-04-13 07:56:15,163 | INFO     | [monitor] control thread has ended
[2025-04-13 07:56:21] 2025-04-13 07:56:20,079 | INFO     | all workflow threads have been joined
[2025-04-13 07:56:21] 2025-04-13 07:56:20,079 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-13 07:56:21] 2025-04-13 07:56:20,079 | INFO     | traces error code: 0
[2025-04-13 07:56:21] 2025-04-13 07:56:20,080 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-13 07:56:21] 2025-04-13 07:56:20,339 [wrapper] ==== pilot stdout END ====
[2025-04-13 07:56:21] 2025-04-13 07:56:20,415 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-13 07:56:21] 2025-04-13 07:56:20,456 [wrapper] pilotpid: 3056927
[2025-04-13 07:56:21] 2025-04-13 07:56:20,463 [wrapper] Pilot exit status: 0
[2025-04-13 07:56:21] 2025-04-13 07:56:20,619 [wrapper] pandaids: 6600503189
[2025-04-13 07:56:21] 2025-04-13 07:56:20,881 [wrapper] cleanup supervisor_pilot 3653725 3056928
[2025-04-13 07:56:21] 2025-04-13 07:56:20,887 [wrapper] Test setup, not cleaning
[2025-04-13 07:56:21] 2025-04-13 07:56:20,914 [wrapper] apfmon messages muted
[2025-04-13 07:56:21] 2025-04-13 07:56:20,979 [wrapper] ==== wrapper stdout END ====
[2025-04-13 07:56:21] 2025-04-13 07:56:21,051 [wrapper] ==== wrapper stderr END ====
[2025-04-13 07:56:21]  *** Error codes and diagnostics ***
[2025-04-13 07:56:21]     "exeErrorCode": 0,
[2025-04-13 07:56:21]     "exeErrorDiag": "",
[2025-04-13 07:56:21]     "pilotErrorCode": 0,
[2025-04-13 07:56:21]     "pilotErrorDiag": "",
[2025-04-13 07:56:21]  *** Listing of results directory ***
[2025-04-13 07:56:21] total 417232
[2025-04-13 07:56:21] -rw-r--r-- 1 boinc boinc    495897 Apr 12 18:02 pilot3.tar.gz
[2025-04-13 07:56:21] -rw-r--r-- 1 boinc boinc      5111 Apr 12 18:10 queuedata.json
[2025-04-13 07:56:21] -rwx------ 1 boinc boinc     37140 Apr 12 18:10 runpilot2-wrapper.sh
[2025-04-13 07:56:21] -rw-rw-r-- 1 boinc boinc       100 Apr 13 05:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-13 07:56:21] -rwxr-xr-x 1 boinc boinc      7986 Apr 13 05:35 run_atlas
[2025-04-13 07:56:21] -rw-rw-r-- 1 boinc boinc       105 Apr 13 05:35 job.xml
[2025-04-13 07:56:21] -rw-r--r-- 2 boinc boinc     17569 Apr 13 05:35 start_atlas.sh
[2025-04-13 07:56:21] drwxrwx--x 2 boinc boinc      4096 Apr 13 05:35 shared
[2025-04-13 07:56:21] -rw-r--r-- 2 boinc boinc    508883 Apr 13 05:35 input.tar.gz
[2025-04-13 07:56:21] -rw-rw-r-- 1 boinc boinc      6940 Apr 13 05:35 init_data.xml
[2025-04-13 07:56:21] -rw-r--r-- 2 boinc boinc 223373712 Apr 13 05:35 EVNT.44075162._001844.pool.root.1
[2025-04-13 07:56:21] -rw-rw-r-- 1 boinc boinc         0 Apr 13 05:35 boinc_lockfile
[2025-04-13 07:56:21] -rw-rw-r-- 1 boinc boinc      2549 Apr 13 05:35 pandaJob.out
[2025-04-13 07:56:21] -rw------- 1 boinc boinc       424 Apr 13 05:35 setup.sh.local
[2025-04-13 07:56:21] -rw------- 1 boinc boinc    985800 Apr 13 05:37 agis_schedconf.cvmfs.json
[2025-04-13 07:56:21] -rw------- 1 boinc boinc   1603529 Apr 13 05:37 agis_ddmendpoints.agis.ALL.json
[2025-04-13 07:56:21] drwx------ 4 boinc boinc      4096 Apr 13 05:38 pilot3
[2025-04-13 07:56:21] -rw------- 1 boinc boinc 197770803 Apr 13 07:53 HITS.44075164._047404.pool.root.1
[2025-04-13 07:56:21] -rw-rw-r-- 1 boinc boinc       530 Apr 13 07:53 boinc_task_state.xml
[2025-04-13 07:56:21] -rw------- 1 boinc boinc      1024 Apr 13 07:54 memory_monitor_summary.json
[2025-04-13 07:56:21] -rw------- 1 boinc boinc    394964 Apr 13 07:54 log.44075164._047404.job.log.tgz.1
[2025-04-13 07:56:21] -rw------- 1 boinc boinc        95 Apr 13 07:55 pilot_heartbeat.json
[2025-04-13 07:56:21] -rw------- 1 boinc boinc      7648 Apr 13 07:56 heartbeat.json
[2025-04-13 07:56:21] -rw-rw-r-- 1 boinc boinc        27 Apr 13 07:56 wrapper_checkpoint.txt
[2025-04-13 07:56:21] -rw-rw-r-- 1 boinc boinc      8192 Apr 13 07:56 boinc_mmap_file
[2025-04-13 07:56:21] -rw------- 1 boinc boinc      4500 Apr 13 07:56 pilotlog.txt
[2025-04-13 07:56:21] -rw------- 1 boinc boinc    734136 Apr 13 07:56 log.44075164._047404.job.log.1
[2025-04-13 07:56:21] -rw------- 1 boinc boinc       357 Apr 13 07:56 output.list
[2025-04-13 07:56:21] -rw-rw-r-- 1 boinc boinc       620 Apr 13 07:56 runtime_log
[2025-04-13 07:56:21] -rw------- 1 boinc boinc   1146880 Apr 13 07:56 result.tar.gz
[2025-04-13 07:56:21] -rw-rw-r-- 1 boinc boinc     11409 Apr 13 07:56 runtime_log.err
[2025-04-13 07:56:21] -rw------- 1 boinc boinc       652 Apr 13 07:56 0avNDmAUuN7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmVdyKDmqiivQo.diag
[2025-04-13 07:56:21] -rw-rw-r-- 1 boinc boinc     20773 Apr 13 07:56 stderr.txt
[2025-04-13 07:56:21] HITS file was successfully produced:
[2025-04-13 07:56:21] -rw------- 1 boinc boinc 197770803 Apr 13 07:53 shared/HITS.pool.root.1
[2025-04-13 07:56:21]  *** Contents of shared directory: ***
[2025-04-13 07:56:21] total 412924
[2025-04-13 07:56:21] -rw-r--r-- 2 boinc boinc     17569 Apr 13 05:35 start_atlas.sh
[2025-04-13 07:56:21] -rw-r--r-- 2 boinc boinc    508883 Apr 13 05:35 input.tar.gz
[2025-04-13 07:56:21] -rw-r--r-- 2 boinc boinc 223373712 Apr 13 05:35 ATLAS.root_0
[2025-04-13 07:56:21] -rw------- 1 boinc boinc 197770803 Apr 13 07:53 HITS.pool.root.1
[2025-04-13 07:56:21] -rw------- 1 boinc boinc   1146880 Apr 13 07:56 result.tar.gz
07:56:23 (3039860): run_atlas exited; CPU time 45880.861769
07:56:23 (3039860): called boinc_finish(0)

</stderr_txt>
]]>

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