Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-12 21:04:24 (5256): Detected: vboxwrapper 26206
2025-04-12 21:04:24 (5256): Detected: BOINC client v7.24.1
2025-04-12 21:04:24 (5256): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2025-04-12 21:04:25 (5256): Successfully copied 'init_data.xml' to the shared directory.
2025-04-12 21:04:25 (5256): Create VM. (boinc_6f2e05f0f7c01635, slot#3)
2025-04-12 21:04:26 (5256): Setting Memory Size for VM. (4800MB)
2025-04-12 21:04:26 (5256): Setting CPU Count for VM. (8)
2025-04-12 21:04:26 (5256): Setting Chipset Options for VM.
2025-04-12 21:04:26 (5256): Setting Graphics Controller Options for VM.
2025-04-12 21:04:27 (5256): Setting Boot Options for VM.
2025-04-12 21:04:27 (5256): Setting Network Configuration for NAT.
2025-04-12 21:04:27 (5256): Enabling VM Network Access.
2025-04-12 21:04:27 (5256): Disabling USB Support for VM.
2025-04-12 21:04:28 (5256): Disabling COM Port Support for VM.
2025-04-12 21:04:28 (5256): Disabling LPT Port Support for VM.
2025-04-12 21:04:28 (5256): Disabling Audio Support for VM.
2025-04-12 21:04:28 (5256): Disabling Clipboard Support for VM.
2025-04-12 21:04:29 (5256): Disabling Drag and Drop Support for VM.
2025-04-12 21:04:29 (5256): Adding storage controller(s) to VM.
2025-04-12 21:04:29 (5256): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-12 21:04:30 (5256): Adding VirtualBox Guest Additions to VM.
2025-04-12 21:04:30 (5256): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-12 21:04:30 (5256): forwarding host port 50019 to guest port 80
2025-04-12 21:04:30 (5256): Enabling remote desktop for VM.
2025-04-12 21:04:31 (5256): Required extension pack not installed, remote desktop not enabled.
2025-04-12 21:04:31 (5256): Enabling shared directory for VM.
2025-04-12 21:04:31 (5256): Starting VM using VBoxManage interface. (boinc_6f2e05f0f7c01635, slot#3)
2025-04-12 21:04:35 (5256): Successfully started VM. (PID = '11036')
2025-04-12 21:04:35 (5256): Reporting VM Process ID to BOINC.
2025-04-12 21:04:35 (5256): Guest Log: BIOS: VirtualBox 6.0.14
2025-04-12 21:04:35 (5256): Guest Log: CPUID EDX: 0x178bfbff
2025-04-12 21:04:35 (5256): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-12 21:04:35 (5256): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-12 21:04:35 (5256): Detected: Web Application Enabled (http://localhost:50019)
2025-04-12 21:04:35 (5256): Preference change detected
2025-04-12 21:04:35 (5256): Setting CPU throttle for VM. (100%)
2025-04-12 21:04:36 (5256): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-12 21:04:37 (5256): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-12 21:04:37 (5256): Guest Log: BIOS: Booting from Hard Disk...
2025-04-12 21:04:40 (5256): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-12 21:04:40 (5256): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-12 21:04:40 (5256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-12 21:04:49 (5256): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-12 21:04:49 (5256): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-12 21:05:01 (5256): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-12 21:05:01 (5256): Guest Log: 00:00:00.000215 main     Log opened 2025-04-12T21:04:59.636561000Z
2025-04-12 21:05:01 (5256): Guest Log: 00:00:00.000343 main     OS Product: Linux
2025-04-12 21:05:01 (5256): Guest Log: 00:00:00.000399 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-12 21:05:01 (5256): Guest Log: 00:00:00.000447 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-12 21:05:01 (5256): Guest Log: 00:00:00.000516 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-12 21:05:01 (5256): Guest Log: 00:00:00.000518 main     Process ID: 1369
2025-04-12 21:05:01 (5256): Guest Log: 00:00:00.000520 main     Package type: LINUX_64BITS_GENERIC
2025-04-12 21:05:01 (5256): Guest Log: 00:00:00.001999 main     5.2.32 r132073 started. Verbose level = 0
2025-04-12 21:05:01 (5256): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-12 21:05:01 (5256): Guest Log: [INFO] Mounting shared directory
2025-04-12 21:05:01 (5256): Guest Log: [INFO] Checking for init_data.xml
2025-04-12 21:05:06 (5256): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-12 21:05:06 (5256): Guest Log: [INFO] Detected branch: prod
2025-04-12 21:05:06 (5256): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-12 21:05:06 (5256): Guest Log: Copying input files
2025-04-12 21:05:09 (5256): Guest Log: Copied input files into RunAtlas.
2025-04-12 21:05:09 (5256): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-12 21:05:09 (5256): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-12 21:05:09 (5256): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-12 21:05:09 (5256): Guest Log: Further information can be found at the LHC@home message board.
2025-04-12 21:05:11 (5256): Guest Log: 00:00:10.006098 timesync vgsvcTimeSyncWorker: Radical guest time change: 36 011 437 298 000ns (GuestNow=1 744 527 911 077 847 000 ns GuestLast=1 744 491 899 640 549 000 ns fSetTimeLastLoop=true )
2025-04-12 21:05:17 (5256): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-12 21:05:18 (5256): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-12 21:05:18 (5256): Guest Log: 2.6.3.0 1665 0 32220 144802 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-12 21:05:19 (5256): Guest Log: copied the webapp to /var/www
2025-04-12 21:05:19 (5256): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-12 21:05:19 (5256): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-12 21:05:19 (5256): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-12 21:05:19 (5256): Guest Log:  *** Starting ATLAS job. (PandaID=6600441502 taskID=44075164) ***
2025-04-12 22:44:41 (5256): Status Report: Elapsed Time: '6000.000000'
2025-04-12 22:44:41 (5256): Status Report: CPU Time: '36446.609375'
2025-04-13 00:24:47 (5256): Status Report: Elapsed Time: '12000.000000'
2025-04-13 00:24:47 (5256): Status Report: CPU Time: '82892.359375'
2025-04-13 01:33:49 (5256): Guest Log:  *** Job finished ***
2025-04-13 01:33:49 (5256): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-13 01:33:49 (5256): Guest Log: 2025-04-13 11:33:39,139 | INFO     | [payload] validate_pre thread has finished
2025-04-13 01:33:49 (5256): Guest Log: 2025-04-13 11:33:39,383 | INFO     | [payload] execute_payloads thread has finished
2025-04-13 01:33:49 (5256): Guest Log: 2025-04-13 11:33:42,234 | INFO     | [data] queue_monitor thread has finished
2025-04-13 01:33:49 (5256): Guest Log: 2025-04-13 11:33:42,277 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139702894929728)>', '<ExcThread(monitor, started 139702451558144)>']
2025-04-13 01:33:49 (5256): Guest Log: 2025-04-13 11:33:42,372 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-13 01:33:49 (5256): Guest Log: 2025-04-13 11:33:42,372 | INFO     | [monitor] control thread has ended
2025-04-13 01:33:49 (5256): Guest Log: 2025-04-13 11:33:47,281 | INFO     | all workflow threads have been joined
2025-04-13 01:33:49 (5256): Guest Log: 2025-04-13 11:33:47,282 | INFO     | end of generic workflow (traces error code: 0)
2025-04-13 01:33:49 (5256): Guest Log: 2025-04-13 11:33:47,282 | INFO     | traces error code: 0
2025-04-13 01:33:49 (5256): Guest Log: 2025-04-13 11:33:47,282 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-13 01:33:49 (5256): Guest Log: 2025-04-13 11:33:47,418 [wrapper] ==== pilot stdout END ====
2025-04-13 01:33:49 (5256): Guest Log: 2025-04-13 11:33:47,426 [wrapper] ==== wrapper stdout RESUME ====
2025-04-13 01:33:49 (5256): Guest Log: 2025-04-13 11:33:47,433 [wrapper] pilotpid: 6026
2025-04-13 01:33:49 (5256): Guest Log: 2025-04-13 11:33:47,440 [wrapper] Pilot exit status: 0
2025-04-13 01:33:49 (5256): Guest Log: 2025-04-13 11:33:47,537 [wrapper] pandaids: 6600441502
2025-04-13 01:33:49 (5256): Guest Log: 2025-04-13 11:33:47,595 [wrapper] cleanup supervisor_pilot 17232 6027
2025-04-13 01:33:49 (5256): Guest Log: 2025-04-13 11:33:47,605 [wrapper] Test setup, not cleaning
2025-04-13 01:33:49 (5256): Guest Log: 2025-04-13 11:33:47,612 [wrapper] apfmon messages muted
2025-04-13 01:33:49 (5256): Guest Log: 2025-04-13 11:33:47,620 [wrapper] ==== wrapper stdout END ====
2025-04-13 01:33:49 (5256): Guest Log: 2025-04-13 11:33:47,628 [wrapper] ==== wrapper stderr END ====
2025-04-13 01:33:49 (5256): Guest Log:  *** Error codes and diagnostics ***
2025-04-13 01:33:49 (5256): Guest Log:     "exeErrorCode": 0,
2025-04-13 01:33:49 (5256): Guest Log:     "exeErrorDiag": "",
2025-04-13 01:33:49 (5256): Guest Log:     "pilotErrorCode": 0,
2025-04-13 01:33:49 (5256): Guest Log:     "pilotErrorDiag": "",
2025-04-13 01:33:49 (5256): Guest Log:  *** Listing of results directory ***
2025-04-13 01:33:49 (5256): Guest Log: total 194988
2025-04-13 01:33:49 (5256): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 12 12:54 pilot3.tar.gz
2025-04-13 01:33:49 (5256): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 12 13:00 queuedata.json
2025-04-13 01:33:49 (5256): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 12 13:01 runpilot2-wrapper.sh
2025-04-13 01:33:49 (5256): Guest Log: -rwxr-xr-x. 1 atlas atlas      9072 Apr 13 07:05 init_data.xml
2025-04-13 01:33:49 (5256): Guest Log: -rwxr-xr-x. 1 atlas atlas    508887 Apr 13 07:05 input.tar.gz
2025-04-13 01:33:49 (5256): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 13 07:05 start_atlas.sh
2025-04-13 01:33:49 (5256): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 13 07:05 EVNT.44075162._001734.pool.root.1 -> /data/./ATLAS.root_0
2025-04-13 01:33:49 (5256): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Apr 13 07:05 pandaJob.out
2025-04-13 01:33:49 (5256): Guest Log: -rw-------. 1 atlas atlas       424 Apr 13 07:05 setup.sh.local
2025-04-13 01:33:49 (5256): Guest Log: -rw-------. 1 atlas atlas    985800 Apr 13 07:06 agis_schedconf.cvmfs.json
2025-04-13 01:33:49 (5256): Guest Log: drwx------. 4 atlas atlas      4096 Apr 13 07:06 pilot3
2025-04-13 01:33:49 (5256): Guest Log: -rw-------. 1 atlas atlas 192534695 Apr 13 11:32 HITS.44075164._044642.pool.root.1
2025-04-13 01:33:49 (5256): Guest Log: -rw-------. 1 atlas atlas      1035 Apr 13 11:33 memory_monitor_summary.json
2025-04-13 01:33:49 (5256): Guest Log: -rw-------. 1 atlas atlas        95 Apr 13 11:33 pilot_heartbeat.json
2025-04-13 01:33:49 (5256): Guest Log: -rw-------. 1 atlas atlas   1603529 Apr 13 11:33 agis_ddmendpoints.agis.ALL.json
2025-04-13 01:33:49 (5256): Guest Log: -rw-------. 1 atlas atlas    390097 Apr 13 11:33 log.44075164._044642.job.log.tgz.1
2025-04-13 01:33:49 (5256): Guest Log: -rw-------. 1 atlas atlas      7739 Apr 13 11:33 heartbeat.json
2025-04-13 01:33:49 (5256): Guest Log: -rw-------. 1 atlas atlas      4413 Apr 13 11:33 pilotlog.txt
2025-04-13 01:33:49 (5256): Guest Log: -rw-------. 1 atlas atlas   1288064 Apr 13 11:33 log.44075164._044642.job.log.1
2025-04-13 01:33:49 (5256): Guest Log: -rw-------. 1 atlas atlas       357 Apr 13 11:33 output.list
2025-04-13 01:33:49 (5256): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 13 11:33 runtime_log
2025-04-13 01:33:49 (5256): Guest Log: -rw-------. 1 atlas atlas   1699840 Apr 13 11:33 result.tar.gz
2025-04-13 01:33:49 (5256): Guest Log: -rw-------. 1 atlas atlas       670 Apr 13 11:33 UnMMDmxepN7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmKRyKDmgbUOxm.diag
2025-04-13 01:33:49 (5256): Guest Log: -rw-r--r--. 1 atlas atlas     10975 Apr 13 11:33 runtime_log.err
2025-04-13 01:33:49 (5256): Guest Log: Looking for outputfile HITS.44075164._044642.pool.root.1
2025-04-13 01:33:49 (5256): Guest Log: HITS file was successfully produced
2025-04-13 01:33:49 (5256): Guest Log: -rw-------. 1 atlas atlas 192534695 Apr 13 11:32 /home/atlas/RunAtlas/HITS.44075164._044642.pool.root.1
2025-04-13 01:33:51 (5256): Guest Log: Successfully finished the ATLAS job!
2025-04-13 01:33:51 (5256): Guest Log: Copying the results back to the shared directory!
2025-04-13 01:33:51 (5256): Guest Log:  *** Contents of shared directory: ***
2025-04-13 01:33:51 (5256): Guest Log: total 404996
2025-04-13 01:33:51 (5256): Guest Log: -rwxrwxrwx. 1 root root 219931347 Apr 13 07:04 ATLAS.root_0
2025-04-13 01:33:51 (5256): Guest Log: -rwxrwxrwx. 1 root root 192534695 Apr 13 11:33 HITS.pool.root.1
2025-04-13 01:33:51 (5256): Guest Log: -rwxrwxrwx. 1 root root      9072 Apr 13 07:04 init_data.xml
2025-04-13 01:33:51 (5256): Guest Log: -rwxrwxrwx. 1 root root    508887 Apr 13 02:09 input.tar.gz
2025-04-13 01:33:51 (5256): Guest Log: -rwxrwxrwx. 1 root root   1699840 Apr 13 11:33 result.tar.gz
2025-04-13 01:33:51 (5256): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 13 02:09 start_atlas.sh
2025-04-13 01:33:51 (5256): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-13 01:33:51 (5256): VM Completion File Detected.
2025-04-13 01:33:51 (5256): Powering off VM.
2025-04-13 01:33:52 (5256): Successfully stopped VM.
2025-04-13 01:33:52 (5256): Deregistering VM. (boinc_6f2e05f0f7c01635, slot#3)
2025-04-13 01:33:52 (5256): Removing network bandwidth throttle group from VM.
2025-04-13 01:33:52 (5256): Removing VM from VirtualBox.
01:33:57 (5256): called boinc_finish(0)

</stderr_txt>
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