Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:54:18 (34865): wrapper (7.7.26015): starting
18:54:18 (34865): wrapper: running run_atlas (--nthreads 10)
[2025-04-12 18:54:18] Arguments: --nthreads 10
[2025-04-12 18:54:18] Threads: 10
[2025-04-12 18:54:18] Checking for CVMFS
[2025-04-12 18:54:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-12 18:54:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-12 18:54:21] Running cvmfs_config stat atlas.cern.ch
[2025-04-12 18:54:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-12 18:54:22] 2.11.2.0 20863 18793 230924 144791 1 575 11748298 18432000 19937 130560 0 98059818 98.970 234398230 36926 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-12 18:54:22] CVMFS is ok
[2025-04-12 18:54:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-12 18:54:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-12 18:54:22] Further information can be found at the LHC@home message board.
[2025-04-12 18:54:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-12 18:54:22] Checking for apptainer binary...
[2025-04-12 18:54:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-12 18:54:22] Running /usr/bin/apptainer --version
[2025-04-12 18:54:23] apptainer version 1.3.2-1.el7
[2025-04-12 18:54:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-12 18:54:46] c-210-1.aglt2.org
[2025-04-12 18:54:46] apptainer works
[2025-04-12 18:54:46] Set ATHENA_PROC_NUMBER=10
[2025-04-12 18:54:46] Set ATHENA_CORE_NUMBER=10
[2025-04-12 18:54:46] Starting ATLAS job with PandaID=6600505184
[2025-04-12 18:54:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
11:20:05 (34865): BOINC client no longer exists - exiting
11:20:05 (34865): timer handler: client dead, exiting
11:30:17 (1800): wrapper (7.7.26015): starting
11:30:17 (1800): wrapper: running run_atlas (--nthreads 10)
[2025-04-13 11:30:17] Arguments: --nthreads 10
[2025-04-13 11:30:17] Threads: 10
[2025-04-13 11:30:17] This job has been restarted, cleaning up previous attempt
[2025-04-13 11:30:18] Checking for CVMFS
[2025-04-13 11:30:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-13 11:30:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-13 11:30:20] Running cvmfs_config stat atlas.cern.ch
[2025-04-13 11:30:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-13 11:30:21] 2.11.2.0 20863 19789 226880 144816 2 433 17588327 18432000 14041 130560 0 101590213 98.957 245151785 36829 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-13 11:30:21] CVMFS is ok
[2025-04-13 11:30:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-13 11:30:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-13 11:30:21] Further information can be found at the LHC@home message board.
[2025-04-13 11:30:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-13 11:30:21] Checking for apptainer binary...
[2025-04-13 11:30:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-13 11:30:21] Running /usr/bin/apptainer --version
[2025-04-13 11:30:22] apptainer version 1.3.2-1.el7
[2025-04-13 11:30:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-13 11:30:39] c-210-1.aglt2.org
[2025-04-13 11:30:39] apptainer works
[2025-04-13 11:30:39] Set ATHENA_PROC_NUMBER=10
[2025-04-13 11:30:39] Set ATHENA_CORE_NUMBER=10
[2025-04-13 11:30:39] Starting ATLAS job with PandaID=6600505184
[2025-04-13 11:30:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-14 05:36:35]  *** The last 200 lines of the pilot log: ***
[2025-04-14 05:36:35] 2025-04-14 09:36:11,371 | INFO     | mean y: 2548450.339640492
[2025-04-14 05:36:35] 2025-04-14 09:36:11,372 | INFO     | -- intersect: -6229681166.07766
[2025-04-14 05:36:35] 2025-04-14 09:36:11,372 | INFO     | intersect: -6229681166.07766
[2025-04-14 05:36:35] 2025-04-14 09:36:11,373 | INFO     | chi2: 8.036115072577237
[2025-04-14 05:36:35] 2025-04-14 09:36:11,374 | INFO     | current chi2=8.036115072577237 (change=16.885695777987657 %)
[2025-04-14 05:36:35] 2025-04-14 09:36:11,374 | INFO     | right removable region: 1056
[2025-04-14 05:36:35] 2025-04-14 09:36:11,375 | INFO     | sum of square deviations: 366189683512.8834
[2025-04-14 05:36:35] 2025-04-14 09:36:11,467 | INFO     | sum of deviations: 823223473059.9851
[2025-04-14 05:36:35] 2025-04-14 09:36:11,468 | INFO     | mean x: 1744591065.2630086
[2025-04-14 05:36:35] 2025-04-14 09:36:11,468 | INFO     | mean y: 2554148.237464522
[2025-04-14 05:36:35] 2025-04-14 09:36:11,468 | INFO     | -- intersect: -3919425034.8945603
[2025-04-14 05:36:35] 2025-04-14 09:36:11,476 | INFO     | intersect: -3919425034.8945603
[2025-04-14 05:36:35] 2025-04-14 09:36:11,536 | INFO     | chi2: 6.104819542039398
[2025-04-14 05:36:35] 2025-04-14 09:36:11,537 | INFO     | current chi2=6.104819542039398 (change=36.86030823911253 %)
[2025-04-14 05:36:35] 2025-04-14 09:36:11,555 | INFO     | sum of square deviations: 361017216564.86914
[2025-04-14 05:36:35] 2025-04-14 09:36:12,024 | INFO     | sum of deviations: 573124432668.4386
[2025-04-14 05:36:35] 2025-04-14 09:36:12,025 | INFO     | mean x: 1744591217.7690115
[2025-04-14 05:36:35] 2025-04-14 09:36:12,025 | INFO     | mean y: 2561521.228136882
[2025-04-14 05:36:35] 2025-04-14 09:36:12,025 | INFO     | -- intersect: -2767023434.957864
[2025-04-14 05:36:35] 2025-04-14 09:36:12,025 | INFO     | intersect: -2767023434.957864
[2025-04-14 05:36:35] 2025-04-14 09:36:12,027 | INFO     | chi2: 4.256392385298395
[2025-04-14 05:36:35] 2025-04-14 09:36:12,027 | INFO     | current chi2=4.256392385298395 (change=30.278162098195473 %)
[2025-04-14 05:36:35] 2025-04-14 09:36:12,029 | INFO     | sum of square deviations: 355893744696.32916
[2025-04-14 05:36:35] 2025-04-14 09:36:12,190 | INFO     | sum of deviations: 341989832353.86743
[2025-04-14 05:36:35] 2025-04-14 09:36:12,191 | INFO     | mean x: 1744591370.2741165
[2025-04-14 05:36:35] 2025-04-14 09:36:12,191 | INFO     | mean y: 2568401.153772684
[2025-04-14 05:36:35] 2025-04-14 09:36:12,198 | INFO     | -- intersect: -1673865981.684659
[2025-04-14 05:36:35] 2025-04-14 09:36:12,199 | INFO     | intersect: -1673865981.684659
[2025-04-14 05:36:35] 2025-04-14 09:36:12,213 | INFO     | chi2: 2.6935755361081686
[2025-04-14 05:36:35] 2025-04-14 09:36:12,214 | INFO     | current chi2=2.6935755361081686 (change=36.71693555763809 %)
[2025-04-14 05:36:35] 2025-04-14 09:36:12,223 | INFO     | sum of square deviations: 350818907790.67285
[2025-04-14 05:36:35] 2025-04-14 09:36:12,548 | INFO     | sum of deviations: 186075204422.22458
[2025-04-14 05:36:35] 2025-04-14 09:36:12,548 | INFO     | mean x: 1744591522.7802303
[2025-04-14 05:36:35] 2025-04-14 09:36:12,549 | INFO     | mean y: 2573082.564299424
[2025-04-14 05:36:35] 2025-04-14 09:36:12,549 | INFO     | -- intersect: -922762516.5884956
[2025-04-14 05:36:35] 2025-04-14 09:36:12,549 | INFO     | intersect: -922762516.5884956
[2025-04-14 05:36:35] 2025-04-14 09:36:12,550 | INFO     | chi2: 1.9064641406257123
[2025-04-14 05:36:35] 2025-04-14 09:36:12,551 | INFO     | current chi2=1.9064641406257123 (change=29.221805177950184 %)
[2025-04-14 05:36:35] 2025-04-14 09:36:12,552 | INFO     | sum of square deviations: 345792536909.9386
[2025-04-14 05:36:35] 2025-04-14 09:36:12,601 | INFO     | sum of deviations: 124778758575.94313
[2025-04-14 05:36:35] 2025-04-14 09:36:12,601 | INFO     | mean x: 1744591675.2864032
[2025-04-14 05:36:35] 2025-04-14 09:36:12,601 | INFO     | mean y: 2574941.2796528446
[2025-04-14 05:36:35] 2025-04-14 09:36:12,601 | INFO     | -- intersect: -626958551.2863216
[2025-04-14 05:36:35] 2025-04-14 09:36:12,601 | INFO     | intersect: -626958551.2863216
[2025-04-14 05:36:35] 2025-04-14 09:36:12,603 | INFO     | chi2: 1.7976717268238696
[2025-04-14 05:36:35] 2025-04-14 09:36:12,603 | INFO     | current chi2=1.7976717268238696 (change=5.706501973131081 %)
[2025-04-14 05:36:35] 2025-04-14 09:36:12,603 | INFO     | left removable region: 50
[2025-04-14 05:36:35] 2025-04-14 09:36:12,605 | INFO     | sum of square deviations: 315699518564.9952
[2025-04-14 05:36:35] 2025-04-14 09:36:12,643 | INFO     | sum of deviations: 156474236568.57648
[2025-04-14 05:36:35] 2025-04-14 09:36:12,644 | INFO     | mean x: 1744592254.7932405
[2025-04-14 05:36:35] 2025-04-14 09:36:12,644 | INFO     | mean y: 2582995.3200795227
[2025-04-14 05:36:35] 2025-04-14 09:36:12,644 | INFO     | -- intersect: -862111833.5889572
[2025-04-14 05:36:35] 2025-04-14 09:36:12,644 | INFO     | intersect: -862111833.5889572
[2025-04-14 05:36:35] 2025-04-14 09:36:12,645 | INFO     | chi2: 0.02013663031572005
[2025-04-14 05:36:35] 2025-04-14 09:36:12,646 | INFO     | -- intersect: -862111833.5889572
[2025-04-14 05:36:35] 2025-04-14 09:36:12,646 | INFO     | current memory leak: 0.50 B/s (using 1006 data points, chi2=0.02)
[2025-04-14 05:36:35] 2025-04-14 09:36:12,647 | INFO     | ..............................
[2025-04-14 05:36:35] 2025-04-14 09:36:12,648 | INFO     | . Timing measurements:
[2025-04-14 05:36:35] 2025-04-14 09:36:12,648 | INFO     | . get job = 0 s
[2025-04-14 05:36:35] 2025-04-14 09:36:12,648 | INFO     | . initial setup = 7 s
[2025-04-14 05:36:35] 2025-04-14 09:36:12,648 | INFO     | . payload setup = 55 s
[2025-04-14 05:36:35] 2025-04-14 09:36:12,648 | INFO     | . stage-in = 0 s
[2025-04-14 05:36:35] 2025-04-14 09:36:12,648 | INFO     | . payload execution = 64789 s
[2025-04-14 05:36:35] 2025-04-14 09:36:12,648 | INFO     | . stage-out = 9 s
[2025-04-14 05:36:35] 2025-04-14 09:36:12,648 | INFO     | . log creation = 2 s
[2025-04-14 05:36:35] 2025-04-14 09:36:12,648 | INFO     | ..............................
[2025-04-14 05:36:35] 2025-04-14 09:36:13,878 | INFO     | 
[2025-04-14 05:36:35] 2025-04-14 09:36:13,878 | INFO     | job summary report
[2025-04-14 05:36:35] 2025-04-14 09:36:13,879 | INFO     | --------------------------------------------------
[2025-04-14 05:36:35] 2025-04-14 09:36:13,879 | INFO     | PanDA job id: 6600505184
[2025-04-14 05:36:35] 2025-04-14 09:36:13,879 | INFO     | task id: 44075164
[2025-04-14 05:36:35] 2025-04-14 09:36:13,879 | INFO     | errors: (none)
[2025-04-14 05:36:35] 2025-04-14 09:36:13,879 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-14 05:36:35] 2025-04-14 09:36:13,879 | INFO     | pilot state: finished 
[2025-04-14 05:36:35] 2025-04-14 09:36:13,879 | INFO     | transexitcode: 0
[2025-04-14 05:36:35] 2025-04-14 09:36:13,879 | INFO     | exeerrorcode: 0
[2025-04-14 05:36:35] 2025-04-14 09:36:13,879 | INFO     | exeerrordiag: 
[2025-04-14 05:36:35] 2025-04-14 09:36:13,880 | INFO     | exitcode: 0
[2025-04-14 05:36:35] 2025-04-14 09:36:13,880 | INFO     | exitmsg: OK
[2025-04-14 05:36:35] 2025-04-14 09:36:13,880 | INFO     | cpuconsumptiontime: 61092 s
[2025-04-14 05:36:35] 2025-04-14 09:36:13,880 | INFO     | nevents: 400
[2025-04-14 05:36:35] 2025-04-14 09:36:13,880 | INFO     | neventsw: 0
[2025-04-14 05:36:35] 2025-04-14 09:36:13,897 | INFO     | pid: 30067
[2025-04-14 05:36:35] 2025-04-14 09:36:13,898 | INFO     | pgrp: 30067
[2025-04-14 05:36:35] 2025-04-14 09:36:13,898 | INFO     | corecount: 10
[2025-04-14 05:36:35] 2025-04-14 09:36:13,898 | INFO     | event service: False
[2025-04-14 05:36:35] 2025-04-14 09:36:13,898 | INFO     | sizes: {0: 2416499, 1: 2417184, 2: 2417383, 13: 2417383, 24: 2417439, 35: 2417467, 41: 2417829, 46: 2417857, 64849: 2467968, 64861: 2476909, 64863: 2476965, 64929:
[2025-04-14 05:36:35] 2025-04-14 09:36:13,898 | INFO     | --------------------------------------------------
[2025-04-14 05:36:35] 2025-04-14 09:36:13,913 | INFO     | 
[2025-04-14 05:36:35] 2025-04-14 09:36:13,913 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-14 05:36:35] 2025-04-14 09:36:14,345 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-14 05:36:35] 2025-04-14 09:36:14,345 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-14 05:36:35] 2025-04-14 09:36:14,345 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-14 05:36:35] 2025-04-14 09:36:14,345 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-14 05:36:35] 2025-04-14 09:36:14,346 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-14 05:36:35] 2025-04-14 09:36:14,346 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-14 05:36:35] 2025-04-14 09:36:14,346 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-14 05:36:35] 2025-04-14 09:36:14,346 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-14 05:36:35] 2025-04-14 09:36:14,390 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-14 05:36:35] 2025-04-14 09:36:14,391 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-14 05:36:35] 2025-04-14 09:36:14,391 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-14 05:36:35] 2025-04-14 09:36:14,391 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-14 05:36:35] 2025-04-14 09:36:14,391 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-14 05:36:35] 2025-04-14 09:36:14,391 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-14 05:36:35] 2025-04-14 09:36:14,391 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-14 05:36:35] 2025-04-14 09:36:14,391 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-14 05:36:35] 2025-04-14 09:36:14,391 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-14 05:36:35] 2025-04-14 09:36:14,391 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-14 05:36:35] 2025-04-14 09:36:14,392 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-14 05:36:35] 2025-04-14 09:36:14,392 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-14 05:36:35] 2025-04-14 09:36:14,392 | INFO     | job 6600505184 has completed (purged errors)
[2025-04-14 05:36:35] 2025-04-14 09:36:14,392 | INFO     | overall cleanup function is called
[2025-04-14 05:36:35] 2025-04-14 09:36:15,288 | INFO     | PID=18548 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-14 05:36:35] 2025-04-14 09:36:15,289 | INFO     | .. there are 42 such processes running
[2025-04-14 05:36:35] 2025-04-14 09:36:15,466 | INFO     | --- collectZombieJob: --- 10, [30067]
[2025-04-14 05:36:35] 2025-04-14 09:36:15,466 | INFO     | zombie collector waiting for pid 30067
[2025-04-14 05:36:35] 2025-04-14 09:36:15,467 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-14 05:36:35] 2025-04-14 09:36:15,467 | INFO     | collected zombie processes
[2025-04-14 05:36:35] 2025-04-14 09:36:15,467 | INFO     | will attempt to kill all subprocesses of pid=30067
[2025-04-14 05:36:35] 2025-04-14 09:36:18,744 | INFO     | process IDs to be killed: [30067] (in reverse order)
[2025-04-14 05:36:35] 2025-04-14 09:36:19,911 | WARNING  | found no corresponding commands to process id(s)
[2025-04-14 05:36:35] 2025-04-14 09:36:19,918 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-14 05:36:35] 2025-04-14 09:36:20,069 | INFO     | did not find any defunct processes belonging to 30067
[2025-04-14 05:36:35] 2025-04-14 09:36:20,186 | INFO     | did not find any defunct processes belonging to 30067
[2025-04-14 05:36:35] 2025-04-14 09:36:20,187 | INFO     | ready for new job
[2025-04-14 05:36:35] 2025-04-14 09:36:20,187 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-14 05:36:35] 2025-04-14 09:36:20,191 | INFO     | **************************************
[2025-04-14 05:36:35] 2025-04-14 09:36:20,191 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-14 05:36:35] 2025-04-14 09:36:20,191 | INFO     | **************************************
[2025-04-14 05:36:35] 2025-04-14 09:36:20,191 | INFO     | 
[2025-04-14 05:36:35] 2025-04-14 09:36:20,194 | INFO     | architecture information:
[2025-04-14 05:36:35] 2025-04-14 09:36:20,202 | INFO     | executing command: cat /etc/os-release
[2025-04-14 05:36:35] 2025-04-14 09:36:20,424 | INFO     | cat /etc/os-release:
[2025-04-14 05:36:35] NAME="CentOS Linux"
[2025-04-14 05:36:35] VERSION="7 (Core)"
[2025-04-14 05:36:35] ID="centos"
[2025-04-14 05:36:35] ID_LIKE="rhel fedora"
[2025-04-14 05:36:35] VERSION_ID="7"
[2025-04-14 05:36:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-14 05:36:35] ANSI_COLOR="0;31"
[2025-04-14 05:36:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-14 05:36:35] HOME_URL="https://www.centos.org/"
[2025-04-14 05:36:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-14 05:36:35] 
[2025-04-14 05:36:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-14 05:36:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-14 05:36:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-14 05:36:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-14 05:36:35] 
[2025-04-14 05:36:35] 2025-04-14 09:36:20,425 | INFO     | **************************************
[2025-04-14 05:36:35] 2025-04-14 09:36:20,928 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-14 05:36:35] 2025-04-14 09:36:21,140 | INFO     | sufficient remaining disk space (57145294848 B)
[2025-04-14 05:36:35] 2025-04-14 09:36:21,140 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-14 05:36:35] 2025-04-14 09:36:21,140 | INFO     | current server update state: UPDATING_FINAL
[2025-04-14 05:36:35] 2025-04-14 09:36:21,141 | INFO     | update_server=False
[2025-04-14 05:36:35] 2025-04-14 09:36:21,141 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-14 05:36:35] 2025-04-14 09:36:21,146 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-14 05:36:35] 2025-04-14 09:36:21,147 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-14 05:36:35] 2025-04-14 09:36:21,297 | INFO     | all payload control threads have been joined
[2025-04-14 05:36:35] 2025-04-14 09:36:21,299 | INFO     | all data control threads have been joined
[2025-04-14 05:36:35] 2025-04-14 09:36:21,392 | INFO     | found 0 job(s) in 20 queues
[2025-04-14 05:36:35] 2025-04-14 09:36:21,393 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-14 05:36:35] 2025-04-14 09:36:21,393 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-14 05:36:35] 2025-04-14 09:36:21,857 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-14 05:36:35] 2025-04-14 09:36:21,858 | INFO     | aborting loop
[2025-04-14 05:36:35] 2025-04-14 09:36:22,036 | INFO     | all job control threads have been joined
[2025-04-14 05:36:35] 2025-04-14 09:36:22,146 | INFO     | [job] retrieve thread has finished
[2025-04-14 05:36:35] 2025-04-14 09:36:22,183 | INFO     | [payload] validate_post thread has finished
[2025-04-14 05:36:35] 2025-04-14 09:36:22,301 | INFO     | [payload] failed_post thread has finished
[2025-04-14 05:36:35] 2025-04-14 09:36:22,302 | INFO     | [payload] control thread has finished
[2025-04-14 05:36:35] 2025-04-14 09:36:22,312 | INFO     | [data] control thread has finished
[2025-04-14 05:36:35] 2025-04-14 09:36:22,315 | INFO     | [job] create_data_payload thread has finished
[2025-04-14 05:36:35] 2025-04-14 09:36:22,324 | INFO     | [job] validate thread has finished
[2025-04-14 05:36:35] 2025-04-14 09:36:22,393 | INFO     | [payload] execute_payloads thread has finished
[2025-04-14 05:36:35] 2025-04-14 09:36:22,863 | INFO     | [job] job monitor thread has finished
[2025-04-14 05:36:35] 2025-04-14 09:36:22,978 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-14 05:36:35] 2025-04-14 09:36:23,042 | INFO     | [job] control thread has finished
[2025-04-14 05:36:35] 2025-04-14 09:36:23,153 | INFO     | [data] copytool_out thread has finished
[2025-04-14 05:36:35] 2025-04-14 09:36:23,273 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-14 05:36:35] 2025-04-14 09:36:23,279 | INFO     | [payload] validate_pre thread has finished
[2025-04-14 05:36:35] 2025-04-14 09:36:23,285 | INFO     | [data] copytool_in thread has finished
[2025-04-14 05:36:35] 2025-04-14 09:36:23,984 | INFO     | [job] queue monitor thread has finished
[2025-04-14 05:36:35] 2025-04-14 09:36:25,155 | INFO     | [data] queue_monitor thread has finished
[2025-04-14 05:36:35] 2025-04-14 09:36:25,724 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139967748740928)>', '<ExcThread(monitor, started 139966768195328)>']
[2025-04-14 05:36:35] 2025-04-14 09:36:26,423 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-14 05:36:35] 2025-04-14 09:36:26,424 | INFO     | [monitor] control thread has ended
[2025-04-14 05:36:35] 2025-04-14 09:36:30,750 | INFO     | all workflow threads have been joined
[2025-04-14 05:36:35] 2025-04-14 09:36:30,755 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-14 05:36:35] 2025-04-14 09:36:30,756 | INFO     | traces error code: 0
[2025-04-14 05:36:35] 2025-04-14 09:36:30,756 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-14 05:36:35] 2025-04-14 09:36:32,174 [wrapper] ==== pilot stdout END ====
[2025-04-14 05:36:35] 2025-04-14 09:36:32,224 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-14 05:36:35] 2025-04-14 09:36:32,270 [wrapper] pilotpid: 18548
[2025-04-14 05:36:35] 2025-04-14 09:36:32,313 [wrapper] Pilot exit status: 0
[2025-04-14 05:36:35] 2025-04-14 09:36:32,532 [wrapper] pandaids: 6600505184 6600505184
[2025-04-14 05:36:35] 2025-04-14 09:36:33,212 [wrapper] cleanup supervisor_pilot 38666 18549
[2025-04-14 05:36:35] 2025-04-14 09:36:33,253 [wrapper] Test setup, not cleaning
[2025-04-14 05:36:35] 2025-04-14 09:36:33,289 [wrapper] apfmon messages muted
[2025-04-14 05:36:35] 2025-04-14 09:36:33,297 [wrapper] ==== wrapper stdout END ====
[2025-04-14 05:36:35] 2025-04-14 09:36:33,321 [wrapper] ==== wrapper stderr END ====
[2025-04-14 05:36:35]  *** Error codes and diagnostics ***
[2025-04-14 05:36:35]     "exeErrorCode": 0,
[2025-04-14 05:36:35]     "exeErrorDiag": "",
[2025-04-14 05:36:35]     "pilotErrorCode": 0,
[2025-04-14 05:36:35]     "pilotErrorDiag": "",
[2025-04-14 05:36:35]  *** Listing of results directory ***
[2025-04-14 05:36:35] total 640076
[2025-04-14 05:36:35] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-04-14 05:36:35] -rw-r--r-- 1 boincer umatlas    495897 Apr 12 15:19 pilot3.tar.gz
[2025-04-14 05:36:35] -rw-r--r-- 1 boincer umatlas      5111 Apr 12 15:34 queuedata.json
[2025-04-14 05:36:35] -rwx------ 1 boincer umatlas     37140 Apr 12 15:34 runpilot2-wrapper.sh
[2025-04-14 05:36:35] -rw-r--r-- 1 boincer umatlas       100 Apr 12 18:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-14 05:36:35] -rwxr-xr-x 1 boincer umatlas      7986 Apr 12 18:54 run_atlas
[2025-04-14 05:36:35] -rw-r--r-- 1 boincer umatlas       105 Apr 12 18:54 job.xml
[2025-04-14 05:36:35] -rw-r--r-- 3 boincer umatlas 221605943 Apr 12 18:54 EVNT.44075162._001873.pool.root.1
[2025-04-14 05:36:35] -rw-r--r-- 3 boincer umatlas 221605943 Apr 12 18:54 ATLAS.root_0
[2025-04-14 05:36:35] -rw-r--r-- 2 boincer umatlas     17569 Apr 12 18:54 start_atlas.sh
[2025-04-14 05:36:35] drwxrwx--x 2 boincer umatlas      4096 Apr 12 18:54 shared
[2025-04-14 05:36:35] -rw-r--r-- 2 boincer umatlas    508881 Apr 12 18:54 input.tar.gz
[2025-04-14 05:36:35] -rw-r--r-- 1 boincer umatlas         0 Apr 12 18:54 boinc_lockfile
[2025-04-14 05:36:35] -rw-r--r-- 1 boincer umatlas      2550 Apr 13 11:30 pandaJob.out
[2025-04-14 05:36:35] -rw------- 1 boincer umatlas       467 Apr 13 11:30 setup.sh.local
[2025-04-14 05:36:35] -rw------- 1 boincer umatlas    985764 Apr 13 11:32 agis_schedconf.cvmfs.json
[2025-04-14 05:36:35] -rw------- 1 boincer umatlas 198184582 Apr 14 05:32 HITS.44075164._048137.pool.root.1
[2025-04-14 05:36:35] -rw-r--r-- 1 boincer umatlas       533 Apr 14 05:32 boinc_task_state.xml
[2025-04-14 05:36:35] -rw------- 1 boincer umatlas      1059 Apr 14 05:34 memory_monitor_summary.json
[2025-04-14 05:36:35] -rw------- 1 boincer umatlas   1603529 Apr 14 05:34 agis_ddmendpoints.agis.ALL.json
[2025-04-14 05:36:35] -rw------- 1 boincer umatlas    816834 Apr 14 05:35 log.44075164._048137.job.log.tgz.1
[2025-04-14 05:36:35] -rw------- 1 boincer umatlas        96 Apr 14 05:35 pilot_heartbeat.json
[2025-04-14 05:36:35] -rw-r--r-- 1 boincer umatlas      6229 Apr 14 05:36 init_data.xml
[2025-04-14 05:36:35] -rw------- 1 boincer umatlas      7753 Apr 14 05:36 heartbeat.json
[2025-04-14 05:36:35] -rw------- 1 boincer umatlas      4353 Apr 14 05:36 pilotlog.txt
[2025-04-14 05:36:35] -rw------- 1 boincer umatlas   4278813 Apr 14 05:36 log.44075164._048137.job.log.1
[2025-04-14 05:36:35] -rw------- 1 boincer umatlas       357 Apr 14 05:36 output.list
[2025-04-14 05:36:35] -rw-r--r-- 1 boincer umatlas      8192 Apr 14 05:36 boinc_mmap_file
[2025-04-14 05:36:35] -rw-r--r-- 1 boincer umatlas       620 Apr 14 05:36 runtime_log
[2025-04-14 05:36:35] -rw------- 1 boincer umatlas   5120000 Apr 14 05:36 result.tar.gz
[2025-04-14 05:36:35] -rw-r--r-- 1 boincer umatlas        30 Apr 14 05:36 wrapper_checkpoint.txt
[2025-04-14 05:36:35] -rw-r--r-- 1 boincer umatlas     11501 Apr 14 05:36 runtime_log.err
[2025-04-14 05:36:35] -rw------- 1 boincer umatlas       789 Apr 14 05:36 OqpKDmwnvN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmtASLDmULPPFm.diag
[2025-04-14 05:36:35] -rw-r--r-- 1 boincer umatlas     23258 Apr 14 05:36 stderr.txt
[2025-04-14 05:36:36] HITS file was successfully produced:
[2025-04-14 05:36:36] -rw------- 1 boincer umatlas 198184582 Apr 14 05:32 shared/HITS.pool.root.1
[2025-04-14 05:36:36]  *** Contents of shared directory: ***
[2025-04-14 05:36:36] total 415480
[2025-04-14 05:36:36] -rw-r--r-- 3 boincer umatlas 221605943 Apr 12 18:54 ATLAS.root_0
[2025-04-14 05:36:36] -rw-r--r-- 2 boincer umatlas     17569 Apr 12 18:54 start_atlas.sh
[2025-04-14 05:36:36] -rw-r--r-- 2 boincer umatlas    508881 Apr 12 18:54 input.tar.gz
[2025-04-14 05:36:36] -rw------- 1 boincer umatlas 198184582 Apr 14 05:32 HITS.pool.root.1
[2025-04-14 05:36:36] -rw------- 1 boincer umatlas   5120000 Apr 14 05:36 result.tar.gz
05:36:37 (1800): run_atlas exited; CPU time 63445.403467
05:36:37 (1800): called boinc_finish(0)

</stderr_txt>
]]>

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