Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:33:20 (85246): wrapper (7.7.26015): starting
18:33:20 (85246): wrapper: running run_atlas (--nthreads 8)
[2025-04-12 18:33:20] Arguments: --nthreads 8
[2025-04-12 18:33:20] Threads: 8
[2025-04-12 18:33:20] Checking for CVMFS
[2025-04-12 18:33:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-12 18:33:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-12 18:33:21] Running cvmfs_config stat atlas.cern.ch
[2025-04-12 18:33:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-12 18:33:22] 2.11.2.0 25144 15984 107148 144791 2 312 10505887 18432001 23827 130560 0 83576758 98.723 227040057 58660 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-12 18:33:22] CVMFS is ok
[2025-04-12 18:33:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-12 18:33:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-12 18:33:22] Further information can be found at the LHC@home message board.
[2025-04-12 18:33:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-12 18:33:22] Checking for apptainer binary...
[2025-04-12 18:33:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-12 18:33:22] Running /usr/bin/apptainer --version
[2025-04-12 18:33:23] apptainer version 1.3.2-1.el7
[2025-04-12 18:33:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-12 18:33:45] c-212-14.aglt2.org
[2025-04-12 18:33:45] apptainer works
[2025-04-12 18:33:45] Set ATHENA_PROC_NUMBER=8
[2025-04-12 18:33:45] Set ATHENA_CORE_NUMBER=8
[2025-04-12 18:33:45] Starting ATLAS job with PandaID=6600382216
[2025-04-12 18:33:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-12 22:09:00]  *** The last 200 lines of the pilot log: ***
[2025-04-12 22:09:00] 2025-04-13 02:08:43,545 | INFO     | -- intersect: -117096938146.33946
[2025-04-12 22:09:00] 2025-04-13 02:08:43,545 | INFO     | intersect: -117096938146.33946
[2025-04-12 22:09:00] 2025-04-13 02:08:43,545 | INFO     | chi2: 8.15583675878905
[2025-04-12 22:09:00] 2025-04-13 02:08:43,546 | INFO     | current chi2=8.15583675878905 (change=8.340031426848302 %)
[2025-04-12 22:09:00] 2025-04-13 02:08:43,546 | INFO     | right removable region: 198
[2025-04-12 22:09:00] 2025-04-13 02:08:43,546 | INFO     | sum of square deviations: 2443606698.3919725
[2025-04-12 22:09:00] 2025-04-13 02:08:43,547 | INFO     | sum of deviations: 91142551724.18599
[2025-04-12 22:09:00] 2025-04-13 02:08:43,547 | INFO     | mean x: 1744503992.0552764
[2025-04-12 22:09:00] 2025-04-13 02:08:43,547 | INFO     | mean y: 2387207.3467336684
[2025-04-12 22:09:00] 2025-04-13 02:08:43,547 | INFO     | -- intersect: -65064771690.84123
[2025-04-12 22:09:00] 2025-04-13 02:08:43,547 | INFO     | intersect: -65064771690.84123
[2025-04-12 22:09:00] 2025-04-13 02:08:43,548 | INFO     | chi2: 4.483243637974947
[2025-04-12 22:09:00] 2025-04-13 02:08:43,548 | INFO     | current chi2=4.483243637974947 (change=49.61473811749268 %)
[2025-04-12 22:09:00] 2025-04-13 02:08:43,548 | INFO     | sum of square deviations: 2263999975.8762975
[2025-04-12 22:09:00] 2025-04-13 02:08:43,549 | INFO     | sum of deviations: 49508083365.5155
[2025-04-12 22:09:00] 2025-04-13 02:08:43,549 | INFO     | mean x: 1744504144.556701
[2025-04-12 22:09:00] 2025-04-13 02:08:43,549 | INFO     | mean y: 2422541.180412371
[2025-04-12 22:09:00] 2025-04-13 02:08:43,549 | INFO     | -- intersect: -38145571072.10197
[2025-04-12 22:09:00] 2025-04-13 02:08:43,549 | INFO     | intersect: -38145571072.10197
[2025-04-12 22:09:00] 2025-04-13 02:08:43,550 | INFO     | chi2: 2.8022889622096914
[2025-04-12 22:09:00] 2025-04-13 02:08:43,550 | INFO     | current chi2=2.8022889622096914 (change=37.49416296555617 %)
[2025-04-12 22:09:00] 2025-04-13 02:08:43,550 | INFO     | sum of square deviations: 2093416678.359791
[2025-04-12 22:09:00] 2025-04-13 02:08:43,551 | INFO     | sum of deviations: 11250095817.227522
[2025-04-12 22:09:00] 2025-04-13 02:08:43,551 | INFO     | mean x: 1744504297.058201
[2025-04-12 22:09:00] 2025-04-13 02:08:43,551 | INFO     | mean y: 2456752.433862434
[2025-04-12 22:09:00] 2025-04-13 02:08:43,551 | INFO     | -- intersect: -9372571496.049814
[2025-04-12 22:09:00] 2025-04-13 02:08:43,551 | INFO     | intersect: -9372571496.049814
[2025-04-12 22:09:00] 2025-04-13 02:08:43,552 | INFO     | chi2: 1.3647143722208135
[2025-04-12 22:09:00] 2025-04-13 02:08:43,552 | INFO     | current chi2=1.3647143722208135 (change=51.30001257455283 %)
[2025-04-12 22:09:00] 2025-04-13 02:08:43,552 | INFO     | sum of square deviations: 1931624243.3423827
[2025-04-12 22:09:00] 2025-04-13 02:08:43,553 | INFO     | sum of deviations: -10014212928.163044
[2025-04-12 22:09:00] 2025-04-13 02:08:43,553 | INFO     | mean x: 1744504449.5597825
[2025-04-12 22:09:00] 2025-04-13 02:08:43,553 | INFO     | mean y: 2476656.9239130435
[2025-04-12 22:09:00] 2025-04-13 02:08:43,553 | INFO     | -- intersect: 9046595393.904882
[2025-04-12 22:09:00] 2025-04-13 02:08:43,553 | INFO     | intersect: 9046595393.904882
[2025-04-12 22:09:00] 2025-04-13 02:08:43,553 | INFO     | chi2: 0.8140912260384703
[2025-04-12 22:09:00] 2025-04-13 02:08:43,553 | INFO     | current chi2=0.8140912260384703 (change=40.34713471114901 %)
[2025-04-12 22:09:00] 2025-04-13 02:08:43,554 | INFO     | sum of square deviations: 1778390108.324019
[2025-04-12 22:09:00] 2025-04-13 02:08:43,555 | INFO     | sum of deviations: -11004228902.860334
[2025-04-12 22:09:00] 2025-04-13 02:08:43,555 | INFO     | mean x: 1744504602.0614526
[2025-04-12 22:09:00] 2025-04-13 02:08:43,555 | INFO     | mean y: 2477600.0782122905
[2025-04-12 22:09:00] 2025-04-13 02:08:43,555 | INFO     | -- intersect: 10797031547.113474
[2025-04-12 22:09:00] 2025-04-13 02:08:43,555 | INFO     | intersect: 10797031547.113474
[2025-04-12 22:09:00] 2025-04-13 02:08:43,555 | INFO     | chi2: 0.8015582178895425
[2025-04-12 22:09:00] 2025-04-13 02:08:43,555 | INFO     | current chi2=0.8015582178895425 (change=1.539509055995589 %)
[2025-04-12 22:09:00] 2025-04-13 02:08:43,555 | INFO     | left removable region: 50
[2025-04-12 22:09:00] 2025-04-13 02:08:43,556 | INFO     | sum of square deviations: 1005188694.3243217
[2025-04-12 22:09:00] 2025-04-13 02:08:43,556 | INFO     | sum of deviations: 2323428865.918919
[2025-04-12 22:09:00] 2025-04-13 02:08:43,556 | INFO     | mean x: 1744505181.5675676
[2025-04-12 22:09:00] 2025-04-13 02:08:43,557 | INFO     | mean y: 2487873.858108108
[2025-04-12 22:09:00] 2025-04-13 02:08:43,557 | INFO     | -- intersect: -4029823391.1663723
[2025-04-12 22:09:00] 2025-04-13 02:08:43,557 | INFO     | intersect: -4029823391.1663723
[2025-04-12 22:09:00] 2025-04-13 02:08:43,557 | INFO     | chi2: 0.00017540843544613073
[2025-04-12 22:09:00] 2025-04-13 02:08:43,557 | INFO     | -- intersect: -4029823391.1663723
[2025-04-12 22:09:00] 2025-04-13 02:08:43,557 | INFO     | current memory leak: 2.31 B/s (using 148 data points, chi2=0.00)
[2025-04-12 22:09:00] 2025-04-13 02:08:43,558 | INFO     | ..............................
[2025-04-12 22:09:00] 2025-04-13 02:08:43,558 | INFO     | . Timing measurements:
[2025-04-12 22:09:00] 2025-04-13 02:08:43,558 | INFO     | . get job = 0 s
[2025-04-12 22:09:00] 2025-04-13 02:08:43,558 | INFO     | . initial setup = 8 s
[2025-04-12 22:09:00] 2025-04-13 02:08:43,558 | INFO     | . payload setup = 90 s
[2025-04-12 22:09:00] 2025-04-13 02:08:43,558 | INFO     | . stage-in = 0 s
[2025-04-12 22:09:00] 2025-04-13 02:08:43,558 | INFO     | . payload execution = 12496 s
[2025-04-12 22:09:00] 2025-04-13 02:08:43,558 | INFO     | . stage-out = 4 s
[2025-04-12 22:09:00] 2025-04-13 02:08:43,558 | INFO     | . log creation = 0 s
[2025-04-12 22:09:00] 2025-04-13 02:08:43,558 | INFO     | ..............................
[2025-04-12 22:09:00] 2025-04-13 02:08:43,672 | INFO     | 
[2025-04-12 22:09:00] 2025-04-13 02:08:43,681 | INFO     | job summary report
[2025-04-12 22:09:00] 2025-04-13 02:08:43,681 | INFO     | --------------------------------------------------
[2025-04-12 22:09:00] 2025-04-13 02:08:43,681 | INFO     | PanDA job id: 6600382216
[2025-04-12 22:09:00] 2025-04-13 02:08:43,681 | INFO     | task id: 44075164
[2025-04-12 22:09:00] 2025-04-13 02:08:43,681 | INFO     | errors: (none)
[2025-04-12 22:09:00] 2025-04-13 02:08:43,681 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-12 22:09:00] 2025-04-13 02:08:43,681 | INFO     | pilot state: finished 
[2025-04-12 22:09:00] 2025-04-13 02:08:43,681 | INFO     | transexitcode: 0
[2025-04-12 22:09:00] 2025-04-13 02:08:43,681 | INFO     | exeerrorcode: 0
[2025-04-12 22:09:00] 2025-04-13 02:08:43,681 | INFO     | exeerrordiag: 
[2025-04-12 22:09:00] 2025-04-13 02:08:43,681 | INFO     | exitcode: 0
[2025-04-12 22:09:00] 2025-04-13 02:08:43,681 | INFO     | exitmsg: OK
[2025-04-12 22:09:00] 2025-04-13 02:08:43,681 | INFO     | cpuconsumptiontime: 35653 s
[2025-04-12 22:09:00] 2025-04-13 02:08:43,681 | INFO     | nevents: 400
[2025-04-12 22:09:00] 2025-04-13 02:08:43,681 | INFO     | neventsw: 0
[2025-04-12 22:09:00] 2025-04-13 02:08:43,681 | INFO     | pid: 31213
[2025-04-12 22:09:00] 2025-04-13 02:08:43,682 | INFO     | pgrp: 31213
[2025-04-12 22:09:00] 2025-04-13 02:08:43,682 | INFO     | corecount: 8
[2025-04-12 22:09:00] 2025-04-13 02:08:43,682 | INFO     | event service: False
[2025-04-12 22:09:00] 2025-04-13 02:08:43,682 | INFO     | sizes: {0: 2417100, 1: 2417355, 12: 2417355, 23: 2417383, 34: 2417411, 45: 2417439, 55: 2417595, 60: 2417829, 66: 2417857, 12592: 2447763, 12597: 2456704, 12599: 2
[2025-04-12 22:09:00] 2025-04-13 02:08:43,682 | INFO     | --------------------------------------------------
[2025-04-12 22:09:00] 2025-04-13 02:08:43,682 | INFO     | 
[2025-04-12 22:09:00] 2025-04-13 02:08:43,682 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-04-12 22:09:00] 2025-04-13 02:08:43,991 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-12 22:09:00] 2025-04-13 02:08:43,991 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-12 22:09:00] 2025-04-13 02:08:43,991 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-12 22:09:00] 2025-04-13 02:08:43,991 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-12 22:09:00] 2025-04-13 02:08:43,991 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-12 22:09:00] 2025-04-13 02:08:43,992 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-12 22:09:00] 2025-04-13 02:08:43,992 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-12 22:09:00] 2025-04-13 02:08:43,992 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-12 22:09:00] 2025-04-13 02:08:43,992 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-12 22:09:00] 2025-04-13 02:08:43,992 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-12 22:09:00] 2025-04-13 02:08:43,992 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-12 22:09:00] 2025-04-13 02:08:43,992 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-12 22:09:00] 2025-04-13 02:08:43,992 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-12 22:09:00] 2025-04-13 02:08:43,992 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-12 22:09:00] 2025-04-13 02:08:43,992 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-12 22:09:00] 2025-04-13 02:08:43,992 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-12 22:09:00] 2025-04-13 02:08:43,992 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-12 22:09:00] 2025-04-13 02:08:43,992 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-12 22:09:00] 2025-04-13 02:08:43,992 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-12 22:09:00] 2025-04-13 02:08:43,992 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-12 22:09:00] 2025-04-13 02:08:43,993 | INFO     | job 6600382216 has completed (purged errors)
[2025-04-12 22:09:00] 2025-04-13 02:08:43,993 | INFO     | overall cleanup function is called
[2025-04-12 22:09:00] 2025-04-13 02:08:45,036 | INFO     | --- collectZombieJob: --- 10, [31213]
[2025-04-12 22:09:00] 2025-04-13 02:08:45,036 | INFO     | zombie collector waiting for pid 31213
[2025-04-12 22:09:00] 2025-04-13 02:08:45,036 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-12 22:09:00] 2025-04-13 02:08:45,036 | INFO     | collected zombie processes
[2025-04-12 22:09:00] 2025-04-13 02:08:45,036 | INFO     | will attempt to kill all subprocesses of pid=31213
[2025-04-12 22:09:00] 2025-04-13 02:08:45,806 | INFO     | process IDs to be killed: [31213] (in reverse order)
[2025-04-12 22:09:00] 2025-04-13 02:08:46,360 | WARNING  | found no corresponding commands to process id(s)
[2025-04-12 22:09:00] 2025-04-13 02:08:46,360 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-12 22:09:00] 2025-04-13 02:08:46,371 | INFO     | did not find any defunct processes belonging to 31213
[2025-04-12 22:09:00] 2025-04-13 02:08:46,418 | INFO     | did not find any defunct processes belonging to 31213
[2025-04-12 22:09:00] 2025-04-13 02:08:46,418 | INFO     | ready for new job
[2025-04-12 22:09:00] 2025-04-13 02:08:46,418 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-12 22:09:00] 2025-04-13 02:08:46,419 | INFO     | **************************************
[2025-04-12 22:09:00] 2025-04-13 02:08:46,432 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-12 22:09:00] 2025-04-13 02:08:46,432 | INFO     | **************************************
[2025-04-12 22:09:00] 2025-04-13 02:08:46,432 | INFO     | 
[2025-04-12 22:09:00] 2025-04-13 02:08:46,440 | INFO     | architecture information:
[2025-04-12 22:09:00] 2025-04-13 02:08:46,458 | INFO     | executing command: cat /etc/os-release
[2025-04-12 22:09:00] 2025-04-13 02:08:46,575 | INFO     | cat /etc/os-release:
[2025-04-12 22:09:00] NAME="CentOS Linux"
[2025-04-12 22:09:00] VERSION="7 (Core)"
[2025-04-12 22:09:00] ID="centos"
[2025-04-12 22:09:00] ID_LIKE="rhel fedora"
[2025-04-12 22:09:00] VERSION_ID="7"
[2025-04-12 22:09:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-12 22:09:00] ANSI_COLOR="0;31"
[2025-04-12 22:09:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-12 22:09:00] HOME_URL="https://www.centos.org/"
[2025-04-12 22:09:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-12 22:09:00] 
[2025-04-12 22:09:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-12 22:09:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-12 22:09:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-12 22:09:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-12 22:09:00] 
[2025-04-12 22:09:00] 2025-04-13 02:08:46,575 | INFO     | **************************************
[2025-04-12 22:09:00] 2025-04-13 02:08:46,658 | INFO     | PID=7718 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-04-12 22:09:00] 2025-04-13 02:08:46,659 | INFO     | .. there are 25 such processes running
[2025-04-12 22:09:00] 2025-04-13 02:08:47,079 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-04-12 22:09:00] 2025-04-13 02:08:47,203 | INFO     | sufficient remaining disk space (103596163072 B)
[2025-04-12 22:09:00] 2025-04-13 02:08:47,203 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-12 22:09:00] 2025-04-13 02:08:47,204 | INFO     | current server update state: UPDATING_FINAL
[2025-04-12 22:09:00] 2025-04-13 02:08:47,204 | INFO     | update_server=False
[2025-04-12 22:09:00] 2025-04-13 02:08:47,204 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-12 22:09:00] 2025-04-13 02:08:47,204 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-12 22:09:00] 2025-04-13 02:08:47,204 | INFO     | aborting loop
[2025-04-12 22:09:00] 2025-04-13 02:08:47,204 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-12 22:09:00] 2025-04-13 02:08:47,204 | INFO     | found 0 job(s) in 20 queues
[2025-04-12 22:09:00] 2025-04-13 02:08:47,204 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-12 22:09:00] 2025-04-13 02:08:47,204 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-12 22:09:00] 2025-04-13 02:08:47,290 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-12 22:09:00] 2025-04-13 02:08:47,806 | INFO     | all payload control threads have been joined
[2025-04-12 22:09:00] 2025-04-13 02:08:47,814 | INFO     | all data control threads have been joined
[2025-04-12 22:09:00] 2025-04-13 02:08:47,897 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-12 22:09:00] 2025-04-13 02:08:48,014 | INFO     | all job control threads have been joined
[2025-04-12 22:09:00] 2025-04-13 02:08:48,212 | INFO     | [job] retrieve thread has finished
[2025-04-12 22:09:00] 2025-04-13 02:08:48,212 | INFO     | [job] job monitor thread has finished
[2025-04-12 22:09:00] 2025-04-13 02:08:48,662 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-12 22:09:00] 2025-04-13 02:08:48,748 | INFO     | [job] validate thread has finished
[2025-04-12 22:09:00] 2025-04-13 02:08:48,752 | INFO     | [payload] validate_pre thread has finished
[2025-04-12 22:09:00] 2025-04-13 02:08:48,752 | INFO     | [data] copytool_in thread has finished
[2025-04-12 22:09:00] 2025-04-13 02:08:48,812 | INFO     | [payload] control thread has finished
[2025-04-12 22:09:00] 2025-04-13 02:08:48,820 | INFO     | [data] control thread has finished
[2025-04-12 22:09:00] 2025-04-13 02:08:48,898 | INFO     | [payload] validate_post thread has finished
[2025-04-12 22:09:00] 2025-04-13 02:08:48,944 | INFO     | [payload] execute_payloads thread has finished
[2025-04-12 22:09:00] 2025-04-13 02:08:48,984 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-12 22:09:00] 2025-04-13 02:08:48,988 | INFO     | [payload] failed_post thread has finished
[2025-04-12 22:09:00] 2025-04-13 02:08:49,020 | INFO     | [job] control thread has finished
[2025-04-12 22:09:00] 2025-04-13 02:08:49,541 | INFO     | [job] create_data_payload thread has finished
[2025-04-12 22:09:00] 2025-04-13 02:08:49,668 | INFO     | [job] queue monitor thread has finished
[2025-04-12 22:09:00] 2025-04-13 02:08:49,904 | INFO     | [data] copytool_out thread has finished
[2025-04-12 22:09:00] 2025-04-13 02:08:51,315 | INFO     | [data] queue_monitor thread has finished
[2025-04-12 22:09:00] 2025-04-13 02:08:52,436 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140472910759744)>', '<ExcThread(monitor, started 140472299267840)>']
[2025-04-12 22:09:00] 2025-04-13 02:08:53,242 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-12 22:09:00] 2025-04-13 02:08:53,242 | INFO     | [monitor] control thread has ended
[2025-04-12 22:09:00] 2025-04-13 02:08:57,484 | INFO     | all workflow threads have been joined
[2025-04-12 22:09:00] 2025-04-13 02:08:57,484 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-12 22:09:00] 2025-04-13 02:08:57,501 | INFO     | traces error code: 0
[2025-04-12 22:09:00] 2025-04-13 02:08:57,521 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-12 22:09:00] 2025-04-13 02:08:58,652 [wrapper] ==== pilot stdout END ====
[2025-04-12 22:09:00] 2025-04-13 02:08:58,738 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-12 22:09:00] 2025-04-13 02:08:58,783 [wrapper] pilotpid: 7718
[2025-04-12 22:09:00] 2025-04-13 02:08:58,824 [wrapper] Pilot exit status: 0
[2025-04-12 22:09:00] 2025-04-13 02:08:58,999 [wrapper] pandaids: 6600382216
[2025-04-12 22:09:00] 2025-04-13 02:08:59,101 [wrapper] cleanup supervisor_pilot 70007 7719
[2025-04-12 22:09:00] 2025-04-13 02:08:59,104 [wrapper] Test setup, not cleaning
[2025-04-12 22:09:00] 2025-04-13 02:08:59,106 [wrapper] apfmon messages muted
[2025-04-12 22:09:00] 2025-04-13 02:08:59,109 [wrapper] ==== wrapper stdout END ====
[2025-04-12 22:09:00] 2025-04-13 02:08:59,111 [wrapper] ==== wrapper stderr END ====
[2025-04-12 22:09:00]  *** Error codes and diagnostics ***
[2025-04-12 22:09:00]     "exeErrorCode": 0,
[2025-04-12 22:09:00]     "exeErrorDiag": "",
[2025-04-12 22:09:00]     "pilotErrorCode": 0,
[2025-04-12 22:09:00]     "pilotErrorDiag": "",
[2025-04-12 22:09:00]  *** Listing of results directory ***
[2025-04-12 22:09:00] total 415068
[2025-04-12 22:09:00] -rw-r--r-- 1 boincer umatlas      5111 Apr 11 18:01 queuedata.json
[2025-04-12 22:09:00] -rw-r--r-- 1 boincer umatlas    495897 Apr 11 18:01 pilot3.tar.gz
[2025-04-12 22:09:00] -rwx------ 1 boincer umatlas     37140 Apr 11 18:01 runpilot2-wrapper.sh
[2025-04-12 22:09:00] -rw-r--r-- 1 boincer umatlas       100 Apr 12 18:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-12 22:09:00] -rwxr-xr-x 1 boincer umatlas      7986 Apr 12 18:33 run_atlas
[2025-04-12 22:09:00] -rw-r--r-- 1 boincer umatlas       105 Apr 12 18:33 job.xml
[2025-04-12 22:09:00] -rw-r--r-- 2 boincer umatlas 220361373 Apr 12 18:33 EVNT.44075162._001296.pool.root.1
[2025-04-12 22:09:00] -rw-r--r-- 2 boincer umatlas     17569 Apr 12 18:33 start_atlas.sh
[2025-04-12 22:09:00] drwxrwx--x 2 boincer umatlas      4096 Apr 12 18:33 shared
[2025-04-12 22:09:00] -rw-r--r-- 2 boincer umatlas    508883 Apr 12 18:33 input.tar.gz
[2025-04-12 22:09:00] -rw-r--r-- 1 boincer umatlas         0 Apr 12 18:33 boinc_lockfile
[2025-04-12 22:09:00] -rw-r--r-- 1 boincer umatlas      2550 Apr 12 18:33 pandaJob.out
[2025-04-12 22:09:00] -rw------- 1 boincer umatlas       467 Apr 12 18:33 setup.sh.local
[2025-04-12 22:09:00] -rw------- 1 boincer umatlas    985800 Apr 12 18:35 agis_schedconf.cvmfs.json
[2025-04-12 22:09:00] drwx------ 4 boincer umatlas      4096 Apr 12 18:35 pilot3
[2025-04-12 22:09:00] -rw-r--r-- 1 boincer umatlas      6389 Apr 12 22:04 init_data.xml
[2025-04-12 22:09:00] -rw------- 1 boincer umatlas 197831966 Apr 12 22:06 HITS.44075164._033663.pool.root.1
[2025-04-12 22:09:00] -rw-r--r-- 1 boincer umatlas       530 Apr 12 22:06 boinc_task_state.xml
[2025-04-12 22:09:00] -rw------- 1 boincer umatlas      1084 Apr 12 22:07 memory_monitor_summary.json
[2025-04-12 22:09:00] -rw------- 1 boincer umatlas   1603529 Apr 12 22:07 agis_ddmendpoints.agis.ALL.json
[2025-04-12 22:09:00] -rw------- 1 boincer umatlas    378890 Apr 12 22:07 log.44075164._033663.job.log.tgz.1
[2025-04-12 22:09:00] -rw------- 1 boincer umatlas        95 Apr 12 22:08 pilot_heartbeat.json
[2025-04-12 22:09:00] -rw------- 1 boincer umatlas      7766 Apr 12 22:08 heartbeat.json
[2025-04-12 22:09:00] -rw-r--r-- 1 boincer umatlas      8192 Apr 12 22:08 boinc_mmap_file
[2025-04-12 22:09:00] -rw-r--r-- 1 boincer umatlas        28 Apr 12 22:08 wrapper_checkpoint.txt
[2025-04-12 22:09:00] -rw------- 1 boincer umatlas      4869 Apr 12 22:08 pilotlog.txt
[2025-04-12 22:09:00] -rw------- 1 boincer umatlas   1121226 Apr 12 22:08 log.44075164._033663.job.log.1
[2025-04-12 22:09:00] -rw------- 1 boincer umatlas       357 Apr 12 22:08 output.list
[2025-04-12 22:09:00] -rw-r--r-- 1 boincer umatlas       620 Apr 12 22:08 runtime_log
[2025-04-12 22:09:00] -rw------- 1 boincer umatlas   1515520 Apr 12 22:08 result.tar.gz
[2025-04-12 22:09:00] -rw-r--r-- 1 boincer umatlas     11419 Apr 12 22:08 runtime_log.err
[2025-04-12 22:09:00] -rw------- 1 boincer umatlas       664 Apr 12 22:08 mpGMDmLcbN7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmeWxKDmgMyvdn.diag
[2025-04-12 22:09:00] -rw-r--r-- 1 boincer umatlas     21038 Apr 12 22:09 stderr.txt
[2025-04-12 22:09:00] HITS file was successfully produced:
[2025-04-12 22:09:00] -rw------- 1 boincer umatlas 197831966 Apr 12 22:06 shared/HITS.pool.root.1
[2025-04-12 22:09:00]  *** Contents of shared directory: ***
[2025-04-12 22:09:00] total 410400
[2025-04-12 22:09:00] -rw-r--r-- 2 boincer umatlas 220361373 Apr 12 18:33 ATLAS.root_0
[2025-04-12 22:09:00] -rw-r--r-- 2 boincer umatlas     17569 Apr 12 18:33 start_atlas.sh
[2025-04-12 22:09:00] -rw-r--r-- 2 boincer umatlas    508883 Apr 12 18:33 input.tar.gz
[2025-04-12 22:09:00] -rw------- 1 boincer umatlas 197831966 Apr 12 22:06 HITS.pool.root.1
[2025-04-12 22:09:00] -rw------- 1 boincer umatlas   1515520 Apr 12 22:08 result.tar.gz
22:09:02 (85246): run_atlas exited; CPU time 35309.717306
22:09:02 (85246): called boinc_finish(0)

</stderr_txt>
]]>

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