Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:20:29 (27723): wrapper (7.7.26015): starting
17:20:29 (27723): wrapper: running run_atlas (--nthreads 10)
[2025-04-12 17:20:29] Arguments: --nthreads 10
[2025-04-12 17:20:29] Threads: 10
[2025-04-12 17:20:29] Checking for CVMFS
[2025-04-12 17:20:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-12 17:20:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-12 17:20:31] Running cvmfs_config stat atlas.cern.ch
[2025-04-12 17:20:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-12 17:20:33] 2.11.2.0 5576 33247 242232 144788 0 426 15267124 18432001 24176 130560 0 128855651 98.825 347893905 36998 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-12 17:20:33] CVMFS is ok
[2025-04-12 17:20:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-12 17:20:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-12 17:20:33] Further information can be found at the LHC@home message board.
[2025-04-12 17:20:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-12 17:20:33] Checking for apptainer binary...
[2025-04-12 17:20:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-12 17:20:33] Running /usr/bin/apptainer --version
[2025-04-12 17:20:33] apptainer version 1.3.2-1.el7
[2025-04-12 17:20:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-12 17:21:14] c-210-7.aglt2.org
[2025-04-12 17:21:14] apptainer works
[2025-04-12 17:21:14] Set ATHENA_PROC_NUMBER=10
[2025-04-12 17:21:14] Set ATHENA_CORE_NUMBER=10
[2025-04-12 17:21:14] Starting ATLAS job with PandaID=6600502829
[2025-04-12 17:21:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-13 13:24:33]  *** The last 200 lines of the pilot log: ***
[2025-04-13 13:24:34] 2025-04-13 17:23:52,929 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-13 13:24:34] 2025-04-13 17:23:55,437 | INFO     | monitor loop #3146: job 0:6600502829 is in state 'finished'
[2025-04-13 13:24:34] 2025-04-13 17:23:55,441 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-13 13:24:34] 2025-04-13 17:23:57,946 | INFO     | monitor loop #3147: job 0:6600502829 is in state 'finished'
[2025-04-13 13:24:34] 2025-04-13 17:23:57,946 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-13 13:24:34] 2025-04-13 17:24:00,454 | INFO     | monitor loop #3148: job 0:6600502829 is in state 'finished'
[2025-04-13 13:24:34] 2025-04-13 17:24:00,460 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-13 13:24:34] 2025-04-13 17:24:02,979 | INFO     | monitor loop #3149: job 0:6600502829 is in state 'finished'
[2025-04-13 13:24:34] 2025-04-13 17:24:02,979 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-13 13:24:34] 2025-04-13 17:24:05,384 | INFO     | PID=26842 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-13 13:24:34] 2025-04-13 17:24:05,385 | INFO     | .. there are 41 such processes running
[2025-04-13 13:24:34] 2025-04-13 17:24:05,528 | INFO     | monitor loop #3150: job 0:6600502829 is in state 'finished'
[2025-04-13 13:24:34] 2025-04-13 17:24:05,528 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-13 13:24:34] 2025-04-13 17:24:07,302 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-13 13:24:34] 2025-04-13 17:24:07,303 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6600502829/memory_monitor_summary.json (trf name=prmon)
[2025-04-13 13:24:34] 2025-04-13 17:24:07,303 | INFO     | extracted standard info from prmon json
[2025-04-13 13:24:34] 2025-04-13 17:24:07,304 | INFO     | extracted standard memory fields from prmon json
[2025-04-13 13:24:34] 2025-04-13 17:24:07,304 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-13 13:24:34] 2025-04-13 17:24:07,304 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-13 13:24:34] 2025-04-13 17:24:07,304 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-13 13:24:34] 2025-04-13 17:24:07,506 | INFO     | fitting pss+swap vs Time
[2025-04-13 13:24:34] 2025-04-13 17:24:07,508 | INFO     | sum of square deviations: 495361893561.6401
[2025-04-13 13:24:34] 2025-04-13 17:24:07,746 | INFO     | sum of deviations: 2753408887907.0415
[2025-04-13 13:24:34] 2025-04-13 17:24:07,775 | INFO     | mean x: 1744529265.2309666
[2025-04-13 13:24:34] 2025-04-13 17:24:07,775 | INFO     | mean y: 2505897.8220701455
[2025-04-13 13:24:34] 2025-04-13 17:24:07,775 | INFO     | -- intersect: -9694248023.97142
[2025-04-13 13:24:34] 2025-04-13 17:24:07,776 | INFO     | intersect: -9694248023.97142
[2025-04-13 13:24:34] 2025-04-13 17:24:07,777 | INFO     | chi2: 22.308926304634415
[2025-04-13 13:24:34] 2025-04-13 17:24:07,799 | INFO     | sum of square deviations: 489033122814.97217
[2025-04-13 13:24:34] 2025-04-13 17:24:08,001 | INFO     | sum of deviations: 3074732195839.325
[2025-04-13 13:24:34] 2025-04-13 17:24:08,001 | INFO     | mean x: 1744529112.7345362
[2025-04-13 13:24:34] 2025-04-13 17:24:08,001 | INFO     | mean y: 2513633.7680412373
[2025-04-13 13:24:34] 2025-04-13 17:24:08,001 | INFO     | -- intersect: -10965986411.03029
[2025-04-13 13:24:34] 2025-04-13 17:24:08,001 | INFO     | intersect: -10965986411.03029
[2025-04-13 13:24:34] 2025-04-13 17:24:08,003 | INFO     | chi2: 19.087381658330536
[2025-04-13 13:24:34] 2025-04-13 17:24:08,003 | INFO     | current chi2=19.087381658330536 (change=14.440608222524101 %)
[2025-04-13 13:24:34] 2025-04-13 17:24:08,003 | INFO     | right removable region: 1163
[2025-04-13 13:24:34] 2025-04-13 17:24:08,005 | INFO     | sum of square deviations: 489032387154.02954
[2025-04-13 13:24:34] 2025-04-13 17:24:08,039 | INFO     | sum of deviations: 2319838379096.2607
[2025-04-13 13:24:34] 2025-04-13 17:24:08,039 | INFO     | mean x: 1744529417.7362542
[2025-04-13 13:24:34] 2025-04-13 17:24:08,040 | INFO     | mean y: 2516343.68814433
[2025-04-13 13:24:34] 2025-04-13 17:24:08,040 | INFO     | -- intersect: -8273062949.288891
[2025-04-13 13:24:34] 2025-04-13 17:24:08,040 | INFO     | intersect: -8273062949.288891
[2025-04-13 13:24:34] 2025-04-13 17:24:08,041 | INFO     | chi2: 17.231186723620233
[2025-04-13 13:24:34] 2025-04-13 17:24:08,042 | INFO     | current chi2=17.231186723620233 (change=22.76102180659112 %)
[2025-04-13 13:24:34] 2025-04-13 17:24:08,042 | INFO     | left removable region: 10
[2025-04-13 13:24:34] 2025-04-13 17:24:08,043 | INFO     | sum of square deviations: 475298562269.53864
[2025-04-13 13:24:34] 2025-04-13 17:24:08,071 | INFO     | monitor loop #3151: job 0:6600502829 is in state 'finished'
[2025-04-13 13:24:34] 2025-04-13 17:24:08,071 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-13 13:24:34] 2025-04-13 17:24:08,259 | INFO     | sum of deviations: 2264577437107.6045
[2025-04-13 13:24:34] 2025-04-13 17:24:08,260 | INFO     | mean x: 1744529387.2454467
[2025-04-13 13:24:34] 2025-04-13 17:24:08,260 | INFO     | mean y: 2533287.3052905463
[2025-04-13 13:24:34] 2025-04-13 17:24:08,277 | INFO     | -- intersect: -8309340979.393674
[2025-04-13 13:24:34] 2025-04-13 17:24:08,277 | INFO     | intersect: -8309340979.393674
[2025-04-13 13:24:34] 2025-04-13 17:24:08,279 | INFO     | chi2: 10.262879843012874
[2025-04-13 13:24:34] 2025-04-13 17:24:08,279 | INFO     | -- intersect: -8309340979.393674
[2025-04-13 13:24:34] 2025-04-13 17:24:08,280 | INFO     | current memory leak: 4.76 B/s (using 1153 data points, chi2=10.26)
[2025-04-13 13:24:34] 2025-04-13 17:24:08,307 | INFO     | ..............................
[2025-04-13 13:24:34] 2025-04-13 17:24:08,308 | INFO     | . Timing measurements:
[2025-04-13 13:24:34] 2025-04-13 17:24:08,308 | INFO     | . get job = 1 s
[2025-04-13 13:24:34] 2025-04-13 17:24:08,308 | INFO     | . initial setup = 19 s
[2025-04-13 13:24:34] 2025-04-13 17:24:08,308 | INFO     | . payload setup = 172 s
[2025-04-13 13:24:34] 2025-04-13 17:24:08,308 | INFO     | . stage-in = 1 s
[2025-04-13 13:24:34] 2025-04-13 17:24:08,308 | INFO     | . payload execution = 71443 s
[2025-04-13 13:24:34] 2025-04-13 17:24:08,308 | INFO     | . stage-out = 14 s
[2025-04-13 13:24:34] 2025-04-13 17:24:08,308 | INFO     | . log creation = 4 s
[2025-04-13 13:24:34] 2025-04-13 17:24:08,309 | INFO     | ..............................
[2025-04-13 13:24:34] 2025-04-13 17:24:09,018 | INFO     | 
[2025-04-13 13:24:34] 2025-04-13 17:24:09,018 | INFO     | job summary report
[2025-04-13 13:24:34] 2025-04-13 17:24:09,018 | INFO     | --------------------------------------------------
[2025-04-13 13:24:34] 2025-04-13 17:24:09,018 | INFO     | PanDA job id: 6600502829
[2025-04-13 13:24:34] 2025-04-13 17:24:09,019 | INFO     | task id: 44075164
[2025-04-13 13:24:34] 2025-04-13 17:24:09,019 | INFO     | errors: (none)
[2025-04-13 13:24:34] 2025-04-13 17:24:09,019 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-13 13:24:34] 2025-04-13 17:24:09,019 | INFO     | pilot state: finished 
[2025-04-13 13:24:34] 2025-04-13 17:24:09,019 | INFO     | transexitcode: 0
[2025-04-13 13:24:34] 2025-04-13 17:24:09,019 | INFO     | exeerrorcode: 0
[2025-04-13 13:24:34] 2025-04-13 17:24:09,019 | INFO     | exeerrordiag: 
[2025-04-13 13:24:34] 2025-04-13 17:24:09,019 | INFO     | exitcode: 0
[2025-04-13 13:24:34] 2025-04-13 17:24:09,019 | INFO     | exitmsg: OK
[2025-04-13 13:24:34] 2025-04-13 17:24:09,019 | INFO     | cpuconsumptiontime: 59760 s
[2025-04-13 13:24:34] 2025-04-13 17:24:09,020 | INFO     | nevents: 400
[2025-04-13 13:24:34] 2025-04-13 17:24:09,020 | INFO     | neventsw: 0
[2025-04-13 13:24:34] 2025-04-13 17:24:09,020 | INFO     | pid: 38574
[2025-04-13 13:24:34] 2025-04-13 17:24:09,020 | INFO     | pgrp: 38574
[2025-04-13 13:24:34] 2025-04-13 17:24:09,020 | INFO     | corecount: 10
[2025-04-13 13:24:34] 2025-04-13 17:24:09,020 | INFO     | event service: False
[2025-04-13 13:24:34] 2025-04-13 17:24:09,020 | INFO     | sizes: {0: 2417105, 2: 2417133, 3: 2417332, 14: 2417332, 25: 2417360, 36: 2417388, 48: 2417544, 59: 2417572, 71: 2417600, 82: 2417628, 94: 2417684, 97: 2418198, 10
[2025-04-13 13:24:34] 2025-04-13 17:24:09,020 | INFO     | --------------------------------------------------
[2025-04-13 13:24:34] 2025-04-13 17:24:09,020 | INFO     | 
[2025-04-13 13:24:34] 2025-04-13 17:24:09,020 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-13 13:24:34] 2025-04-13 17:24:09,331 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-13 13:24:34] 2025-04-13 17:24:09,331 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-13 13:24:34] 2025-04-13 17:24:09,331 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-13 13:24:34] 2025-04-13 17:24:09,332 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-13 13:24:34] 2025-04-13 17:24:09,332 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-13 13:24:34] 2025-04-13 17:24:09,332 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-13 13:24:34] 2025-04-13 17:24:09,332 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-13 13:24:34] 2025-04-13 17:24:09,332 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-13 13:24:34] 2025-04-13 17:24:09,332 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-13 13:24:34] 2025-04-13 17:24:09,332 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-13 13:24:34] 2025-04-13 17:24:09,332 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-13 13:24:34] 2025-04-13 17:24:09,332 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-13 13:24:34] 2025-04-13 17:24:09,333 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-13 13:24:34] 2025-04-13 17:24:09,333 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-13 13:24:34] 2025-04-13 17:24:09,333 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-13 13:24:34] 2025-04-13 17:24:09,333 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-13 13:24:34] 2025-04-13 17:24:09,333 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-13 13:24:34] 2025-04-13 17:24:09,333 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-13 13:24:34] 2025-04-13 17:24:09,333 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-13 13:24:34] 2025-04-13 17:24:09,333 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-13 13:24:34] 2025-04-13 17:24:09,333 | INFO     | job 6600502829 has completed (purged errors)
[2025-04-13 13:24:34] 2025-04-13 17:24:09,334 | INFO     | overall cleanup function is called
[2025-04-13 13:24:34] 2025-04-13 17:24:10,354 | INFO     | --- collectZombieJob: --- 10, [38574]
[2025-04-13 13:24:34] 2025-04-13 17:24:10,354 | INFO     | zombie collector waiting for pid 38574
[2025-04-13 13:24:34] 2025-04-13 17:24:10,354 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-13 13:24:34] 2025-04-13 17:24:10,354 | INFO     | collected zombie processes
[2025-04-13 13:24:34] 2025-04-13 17:24:10,355 | INFO     | will attempt to kill all subprocesses of pid=38574
[2025-04-13 13:24:34] 2025-04-13 17:24:13,816 | INFO     | process IDs to be killed: [38574] (in reverse order)
[2025-04-13 13:24:34] 2025-04-13 17:24:14,981 | WARNING  | found no corresponding commands to process id(s)
[2025-04-13 13:24:34] 2025-04-13 17:24:14,981 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-13 13:24:34] 2025-04-13 17:24:14,999 | INFO     | did not find any defunct processes belonging to 38574
[2025-04-13 13:24:34] 2025-04-13 17:24:15,031 | INFO     | did not find any defunct processes belonging to 38574
[2025-04-13 13:24:34] 2025-04-13 17:24:15,032 | INFO     | ready for new job
[2025-04-13 13:24:34] 2025-04-13 17:24:15,032 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-13 13:24:34] 2025-04-13 17:24:15,039 | INFO     | **************************************
[2025-04-13 13:24:34] 2025-04-13 17:24:15,039 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-13 13:24:34] 2025-04-13 17:24:15,039 | INFO     | **************************************
[2025-04-13 13:24:34] 2025-04-13 17:24:15,039 | INFO     | 
[2025-04-13 13:24:34] 2025-04-13 17:24:15,067 | INFO     | architecture information:
[2025-04-13 13:24:34] 2025-04-13 17:24:15,076 | INFO     | executing command: cat /etc/os-release
[2025-04-13 13:24:34] 2025-04-13 17:24:15,207 | INFO     | cat /etc/os-release:
[2025-04-13 13:24:34] NAME="CentOS Linux"
[2025-04-13 13:24:34] VERSION="7 (Core)"
[2025-04-13 13:24:34] ID="centos"
[2025-04-13 13:24:34] ID_LIKE="rhel fedora"
[2025-04-13 13:24:34] VERSION_ID="7"
[2025-04-13 13:24:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-13 13:24:34] ANSI_COLOR="0;31"
[2025-04-13 13:24:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-13 13:24:34] HOME_URL="https://www.centos.org/"
[2025-04-13 13:24:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-13 13:24:34] 
[2025-04-13 13:24:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-13 13:24:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-13 13:24:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-13 13:24:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-13 13:24:34] 
[2025-04-13 13:24:34] 2025-04-13 17:24:15,209 | INFO     | **************************************
[2025-04-13 13:24:34] 2025-04-13 17:24:15,712 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-13 13:24:34] 2025-04-13 17:24:15,864 | INFO     | sufficient remaining disk space (57121177600 B)
[2025-04-13 13:24:34] 2025-04-13 17:24:15,865 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-13 13:24:34] 2025-04-13 17:24:15,865 | INFO     | current server update state: UPDATING_FINAL
[2025-04-13 13:24:34] 2025-04-13 17:24:15,865 | INFO     | update_server=False
[2025-04-13 13:24:34] 2025-04-13 17:24:15,865 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-13 13:24:34] 2025-04-13 17:24:15,866 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-13 13:24:34] 2025-04-13 17:24:15,866 | INFO     | found 0 job(s) in 20 queues
[2025-04-13 13:24:34] 2025-04-13 17:24:15,866 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-13 13:24:34] 2025-04-13 17:24:15,867 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-13 13:24:34] 2025-04-13 17:24:15,867 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-13 13:24:34] 2025-04-13 17:24:16,088 | INFO     | all job control threads have been joined
[2025-04-13 13:24:34] 2025-04-13 17:24:16,635 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-13 13:24:34] 2025-04-13 17:24:16,639 | INFO     | aborting loop
[2025-04-13 13:24:34] 2025-04-13 17:24:16,790 | INFO     | all payload control threads have been joined
[2025-04-13 13:24:34] 2025-04-13 17:24:16,872 | INFO     | [job] retrieve thread has finished
[2025-04-13 13:24:34] 2025-04-13 17:24:16,884 | INFO     | all data control threads have been joined
[2025-04-13 13:24:34] 2025-04-13 17:24:16,894 | INFO     | [data] copytool_in thread has finished
[2025-04-13 13:24:34] 2025-04-13 17:24:16,987 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-13 13:24:34] 2025-04-13 17:24:17,001 | INFO     | [job] create_data_payload thread has finished
[2025-04-13 13:24:34] 2025-04-13 17:24:17,095 | INFO     | [job] control thread has finished
[2025-04-13 13:24:34] 2025-04-13 17:24:17,108 | INFO     | [payload] validate_post thread has finished
[2025-04-13 13:24:34] 2025-04-13 17:24:17,644 | INFO     | [job] job monitor thread has finished
[2025-04-13 13:24:34] 2025-04-13 17:24:17,796 | INFO     | [payload] control thread has finished
[2025-04-13 13:24:34] 2025-04-13 17:24:17,820 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-13 13:24:34] 2025-04-13 17:24:17,890 | INFO     | [data] control thread has finished
[2025-04-13 13:24:34] 2025-04-13 17:24:18,139 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-13 13:24:34] 2025-04-13 17:24:18,147 | INFO     | [job] validate thread has finished
[2025-04-13 13:24:34] 2025-04-13 17:24:18,188 | INFO     | [payload] failed_post thread has finished
[2025-04-13 13:24:34] 2025-04-13 17:24:18,372 | INFO     | [payload] validate_pre thread has finished
[2025-04-13 13:24:34] 2025-04-13 17:24:18,381 | INFO     | [payload] execute_payloads thread has finished
[2025-04-13 13:24:34] 2025-04-13 17:24:18,826 | INFO     | [job] queue monitor thread has finished
[2025-04-13 13:24:34] 2025-04-13 17:24:18,993 | INFO     | [data] copytool_out thread has finished
[2025-04-13 13:24:34] 2025-04-13 17:24:19,877 | INFO     | [data] queue_monitor thread has finished
[2025-04-13 13:24:34] 2025-04-13 17:24:20,582 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140510722168640)>', '<ExcThread(monitor, started 140510417102592)>']
[2025-04-13 13:24:34] 2025-04-13 17:24:20,904 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-13 13:24:34] 2025-04-13 17:24:20,904 | INFO     | [monitor] control thread has ended
[2025-04-13 13:24:34] 2025-04-13 17:24:25,612 | INFO     | all workflow threads have been joined
[2025-04-13 13:24:34] 2025-04-13 17:24:25,612 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-13 13:24:34] 2025-04-13 17:24:25,613 | INFO     | traces error code: 0
[2025-04-13 13:24:34] 2025-04-13 17:24:25,613 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-13 13:24:34] 2025-04-13 17:24:30,066 [wrapper] ==== pilot stdout END ====
[2025-04-13 13:24:34] 2025-04-13 17:24:30,107 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-13 13:24:34] 2025-04-13 17:24:30,150 [wrapper] pilotpid: 26842
[2025-04-13 13:24:34] 2025-04-13 17:24:30,194 [wrapper] Pilot exit status: 0
[2025-04-13 13:24:34] 2025-04-13 17:24:30,411 [wrapper] pandaids: 6600502829
[2025-04-13 13:24:34] 2025-04-13 17:24:32,501 [wrapper] cleanup supervisor_pilot 22903 26843
[2025-04-13 13:24:34] 2025-04-13 17:24:32,544 [wrapper] Test setup, not cleaning
[2025-04-13 13:24:34] 2025-04-13 17:24:32,584 [wrapper] apfmon messages muted
[2025-04-13 13:24:34] 2025-04-13 17:24:32,608 [wrapper] ==== wrapper stdout END ====
[2025-04-13 13:24:34] 2025-04-13 17:24:32,628 [wrapper] ==== wrapper stderr END ====
[2025-04-13 13:24:34]  *** Error codes and diagnostics ***
[2025-04-13 13:24:34]     "exeErrorCode": 0,
[2025-04-13 13:24:34]     "exeErrorDiag": "",
[2025-04-13 13:24:34]     "pilotErrorCode": 0,
[2025-04-13 13:24:34]     "pilotErrorDiag": "",
[2025-04-13 13:24:34]  *** Listing of results directory ***
[2025-04-13 13:24:34] total 423084
[2025-04-13 13:24:34] -rw-r--r-- 1 boincer umatlas    495897 Apr 12 13:49 pilot3.tar.gz
[2025-04-13 13:24:34] -rwx------ 1 boincer umatlas     37140 Apr 12 13:51 runpilot2-wrapper.sh
[2025-04-13 13:24:34] -rw-r--r-- 1 boincer umatlas      5111 Apr 12 13:51 queuedata.json
[2025-04-13 13:24:34] -rw-r--r-- 1 boincer umatlas       100 Apr 12 17:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-13 13:24:34] -rwxr-xr-x 1 boincer umatlas      7986 Apr 12 17:20 run_atlas
[2025-04-13 13:24:34] -rw-r--r-- 1 boincer umatlas       105 Apr 12 17:20 job.xml
[2025-04-13 13:24:34] -rw-r--r-- 2 boincer umatlas 219490261 Apr 12 17:20 EVNT.44075162._001837.pool.root.1
[2025-04-13 13:24:34] -rw-r--r-- 2 boincer umatlas     17569 Apr 12 17:20 start_atlas.sh
[2025-04-13 13:24:34] drwxrwx--x 2 boincer umatlas      4096 Apr 12 17:20 shared
[2025-04-13 13:24:34] -rw-r--r-- 2 boincer umatlas    508876 Apr 12 17:20 input.tar.gz
[2025-04-13 13:24:34] -rw-r--r-- 1 boincer umatlas         0 Apr 12 17:20 boinc_lockfile
[2025-04-13 13:24:34] -rw-r--r-- 1 boincer umatlas      2549 Apr 12 17:21 pandaJob.out
[2025-04-13 13:24:34] -rw------- 1 boincer umatlas       467 Apr 12 17:21 setup.sh.local
[2025-04-13 13:24:34] -rw------- 1 boincer umatlas    985800 Apr 12 17:24 agis_schedconf.cvmfs.json
[2025-04-13 13:24:34] drwx------ 4 boincer umatlas      4096 Apr 12 17:25 pilot3
[2025-04-13 13:24:34] -rw------- 1 boincer umatlas 198969570 Apr 13 13:17 HITS.44075164._047220.pool.root.1
[2025-04-13 13:24:34] -rw-r--r-- 1 boincer umatlas       531 Apr 13 13:18 boinc_task_state.xml
[2025-04-13 13:24:34] -rw-r--r-- 1 boincer umatlas      6226 Apr 13 13:19 init_data.xml
[2025-04-13 13:24:34] -rw------- 1 boincer umatlas      1060 Apr 13 13:22 memory_monitor_summary.json
[2025-04-13 13:24:34] -rw------- 1 boincer umatlas   1603529 Apr 13 13:22 agis_ddmendpoints.agis.ALL.json
[2025-04-13 13:24:34] -rw------- 1 boincer umatlas    844765 Apr 13 13:22 log.44075164._047220.job.log.tgz.1
[2025-04-13 13:24:34] -rw------- 1 boincer umatlas        95 Apr 13 13:23 pilot_heartbeat.json
[2025-04-13 13:24:34] -rw------- 1 boincer umatlas      7763 Apr 13 13:24 heartbeat.json
[2025-04-13 13:24:34] -rw------- 1 boincer umatlas      4476 Apr 13 13:24 pilotlog.txt
[2025-04-13 13:24:34] -rw-r--r-- 1 boincer umatlas      8192 Apr 13 13:24 boinc_mmap_file
[2025-04-13 13:24:34] -rw-r--r-- 1 boincer umatlas        28 Apr 13 13:24 wrapper_checkpoint.txt
[2025-04-13 13:24:34] -rw------- 1 boincer umatlas   4623082 Apr 13 13:24 log.44075164._047220.job.log.1
[2025-04-13 13:24:34] -rw------- 1 boincer umatlas       357 Apr 13 13:24 output.list
[2025-04-13 13:24:34] -rw-r--r-- 1 boincer umatlas       620 Apr 13 13:24 runtime_log
[2025-04-13 13:24:34] -rw------- 1 boincer umatlas   5488640 Apr 13 13:24 result.tar.gz
[2025-04-13 13:24:34] -rw------- 1 boincer umatlas       663 Apr 13 13:24 TOkLDm5BuN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmDzRLDmDsR8ym.diag
[2025-04-13 13:24:34] -rw-r--r-- 1 boincer umatlas     11416 Apr 13 13:24 runtime_log.err
[2025-04-13 13:24:34] -rw-r--r-- 1 boincer umatlas     21568 Apr 13 13:24 stderr.txt
[2025-04-13 13:24:34] HITS file was successfully produced:
[2025-04-13 13:24:34] -rw------- 1 boincer umatlas 198969570 Apr 13 13:17 shared/HITS.pool.root.1
[2025-04-13 13:24:34]  *** Contents of shared directory: ***
[2025-04-13 13:24:34] total 414540
[2025-04-13 13:24:34] -rw-r--r-- 2 boincer umatlas 219490261 Apr 12 17:20 ATLAS.root_0
[2025-04-13 13:24:34] -rw-r--r-- 2 boincer umatlas     17569 Apr 12 17:20 start_atlas.sh
[2025-04-13 13:24:34] -rw-r--r-- 2 boincer umatlas    508876 Apr 12 17:20 input.tar.gz
[2025-04-13 13:24:34] -rw------- 1 boincer umatlas 198969570 Apr 13 13:17 HITS.pool.root.1
[2025-04-13 13:24:34] -rw------- 1 boincer umatlas   5488640 Apr 13 13:24 result.tar.gz
13:24:35 (27723): run_atlas exited; CPU time 62384.825117
13:24:35 (27723): called boinc_finish(0)

</stderr_txt>
]]>

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