Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-12 16:41:28 (10588): Detected: vboxwrapper 26206
2025-04-12 16:41:28 (10588): Detected: BOINC client v8.0.4
2025-04-12 16:41:28 (10588): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-04-12 16:41:28 (10588): Successfully copied 'init_data.xml' to the shared directory.
2025-04-12 16:41:29 (10588): Create VM. (boinc_7763c6eed70ab562, slot#2)
2025-04-12 16:41:29 (10588): Setting Memory Size for VM. (4400MB)
2025-04-12 16:41:30 (10588): Setting CPU Count for VM. (4)
2025-04-12 16:41:30 (10588): Setting Chipset Options for VM.
2025-04-12 16:41:30 (10588): Setting Graphics Controller Options for VM.
2025-04-12 16:41:30 (10588): Setting Boot Options for VM.
2025-04-12 16:41:31 (10588): Setting Network Configuration for NAT.
2025-04-12 16:41:31 (10588): Enabling VM Network Access.
2025-04-12 16:41:31 (10588): Disabling USB Support for VM.
2025-04-12 16:41:31 (10588): Disabling COM Port Support for VM.
2025-04-12 16:41:32 (10588): Disabling LPT Port Support for VM.
2025-04-12 16:41:32 (10588): Disabling Audio Support for VM.
2025-04-12 16:41:32 (10588): Disabling Clipboard Support for VM.
2025-04-12 16:41:32 (10588): Disabling Drag and Drop Support for VM.
2025-04-12 16:41:33 (10588): Adding storage controller(s) to VM.
2025-04-12 16:41:33 (10588): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-12 16:41:33 (10588): Adding VirtualBox Guest Additions to VM.
2025-04-12 16:41:34 (10588): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-12 16:41:34 (10588): forwarding host port 52548 to guest port 80
2025-04-12 16:41:34 (10588): Enabling remote desktop for VM.
2025-04-12 16:41:34 (10588): Required extension pack not installed, remote desktop not enabled.
2025-04-12 16:41:34 (10588): Enabling shared directory for VM.
2025-04-12 16:41:35 (10588): Starting VM using VBoxManage interface. (boinc_7763c6eed70ab562, slot#2)
2025-04-12 16:41:40 (10588): Successfully started VM. (PID = '6296')
2025-04-12 16:41:40 (10588): Reporting VM Process ID to BOINC.
2025-04-12 16:41:40 (10588): Guest Log: BIOS: VirtualBox 7.0.6
2025-04-12 16:41:40 (10588): Guest Log: CPUID EDX: 0x178bfbff
2025-04-12 16:41:40 (10588): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-12 16:41:40 (10588): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-12 16:41:40 (10588): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-12 16:41:40 (10588): Detected: Web Application Enabled (http://localhost:52548)
2025-04-12 16:41:40 (10588): Preference change detected
2025-04-12 16:41:40 (10588): Setting CPU throttle for VM. (80%)
2025-04-12 16:41:40 (10588): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-12 16:41:42 (10588): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-12 16:41:42 (10588): Guest Log: BIOS: Booting from Hard Disk...
2025-04-12 16:41:45 (10588): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-12 16:41:45 (10588): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-12 16:41:45 (10588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-12 16:42:00 (10588): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-12 16:42:00 (10588): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-12 16:42:20 (10588): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-12 16:42:20 (10588): Guest Log: 00:00:00.000163 main     Log opened 2025-04-12T16:42:18.083731000Z
2025-04-12 16:42:20 (10588): Guest Log: 00:00:00.000268 main     OS Product: Linux
2025-04-12 16:42:20 (10588): Guest Log: 00:00:00.000303 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-12 16:42:20 (10588): Guest Log: 00:00:00.000331 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-12 16:42:20 (10588): Guest Log: 00:00:00.000358 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-12 16:42:20 (10588): Guest Log: 00:00:00.000359 main     Process ID: 1309
2025-04-12 16:42:20 (10588): Guest Log: 00:00:00.000359 main     Package type: LINUX_64BITS_GENERIC
2025-04-12 16:42:20 (10588): Guest Log: 00:00:00.009827 main     5.2.32 r132073 started. Verbose level = 0
2025-04-12 16:42:20 (10588): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-12 16:42:20 (10588): Guest Log: [INFO] Mounting shared directory
2025-04-12 16:42:20 (10588): Guest Log: [INFO] Checking for init_data.xml
2025-04-12 16:42:25 (10588): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-12 16:42:25 (10588): Guest Log: [INFO] Detected branch: prod
2025-04-12 16:42:26 (10588): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-12 16:42:26 (10588): Guest Log: Copying input files
2025-04-12 16:42:28 (10588): Guest Log: Copied input files into RunAtlas.
2025-04-12 16:42:28 (10588): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-12 16:42:28 (10588): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-12 16:42:28 (10588): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-12 16:42:28 (10588): Guest Log: Further information can be found at the LHC@home message board.
2025-04-12 16:42:30 (10588): Guest Log: 00:00:10.016703 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 288 078 000ns (GuestNow=1 744 490 549 384 138 000 ns GuestLast=1 744 476 138 096 060 000 ns fSetTimeLastLoop=true )
2025-04-12 16:42:38 (10588): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-12 16:42:39 (10588): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-12 16:42:39 (10588): Guest Log: 2.6.3.0 1586 0 30144 144786 3 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-12 16:42:41 (10588): Guest Log: copied the webapp to /var/www
2025-04-12 16:42:42 (10588): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-12 16:42:42 (10588): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-12 16:42:42 (10588): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-12 16:42:42 (10588): Guest Log:  *** Starting ATLAS job. (PandaID=6600421502 taskID=44075164) ***
2025-04-12 18:21:44 (10588): Status Report: Elapsed Time: '6000.000000'
2025-04-12 18:21:44 (10588): Status Report: CPU Time: '9259.968750'
2025-04-12 20:01:47 (10588): Status Report: Elapsed Time: '12000.000000'
2025-04-12 20:01:47 (10588): Status Report: CPU Time: '20810.562500'
2025-04-12 21:41:51 (10588): Status Report: Elapsed Time: '18000.000000'
2025-04-12 21:41:51 (10588): Status Report: CPU Time: '34754.625000'
2025-04-12 21:43:50 (10588): Guest Log:  *** Job finished ***
2025-04-12 21:43:50 (10588): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-12 21:43:50 (10588): Guest Log: 2025-04-13 01:43:37,989 | INFO     | [payload] control thread has finished
2025-04-12 21:43:50 (10588): Guest Log: 2025-04-13 01:43:38,934 | INFO     | [job] queue monitor thread has finished
2025-04-12 21:43:50 (10588): Guest Log: 2025-04-13 01:43:39,526 | INFO     | [data] queue_monitor thread has finished
2025-04-12 21:43:50 (10588): Guest Log: 2025-04-13 01:43:41,751 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140276865533760)>', '<ExcThread(monitor, started 140276274276096)>']
2025-04-12 21:43:50 (10588): Guest Log: 2025-04-13 01:43:42,615 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-12 21:43:50 (10588): Guest Log: 2025-04-13 01:43:42,616 | INFO     | [monitor] control thread has ended
2025-04-12 21:43:50 (10588): Guest Log: 2025-04-13 01:43:46,867 | INFO     | all workflow threads have been joined
2025-04-12 21:43:50 (10588): Guest Log: 2025-04-13 01:43:46,867 | INFO     | end of generic workflow (traces error code: 0)
2025-04-12 21:43:50 (10588): Guest Log: 2025-04-13 01:43:46,867 | INFO     | traces error code: 0
2025-04-12 21:43:50 (10588): Guest Log: 2025-04-13 01:43:46,867 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-12 21:43:50 (10588): Guest Log: 2025-04-13 01:43:47,052 [wrapper] ==== pilot stdout END ====
2025-04-12 21:43:50 (10588): Guest Log: 2025-04-13 01:43:47,073 [wrapper] ==== wrapper stdout RESUME ====
2025-04-12 21:43:50 (10588): Guest Log: 2025-04-13 01:43:47,077 [wrapper] pilotpid: 5925
2025-04-12 21:43:50 (10588): Guest Log: 2025-04-13 01:43:47,082 [wrapper] Pilot exit status: 0
2025-04-12 21:43:50 (10588): Guest Log: 2025-04-13 01:43:47,293 [wrapper] pandaids: 6600421502
2025-04-12 21:43:50 (10588): Guest Log: 2025-04-13 01:43:47,533 [wrapper] cleanup supervisor_pilot 16582 5926
2025-04-12 21:43:50 (10588): Guest Log: 2025-04-13 01:43:47,564 [wrapper] Test setup, not cleaning
2025-04-12 21:43:50 (10588): Guest Log: 2025-04-13 01:43:47,613 [wrapper] apfmon messages muted
2025-04-12 21:43:50 (10588): Guest Log: 2025-04-13 01:43:47,653 [wrapper] ==== wrapper stdout END ====
2025-04-12 21:43:50 (10588): Guest Log: 2025-04-13 01:43:47,717 [wrapper] ==== wrapper stderr END ====
2025-04-12 21:43:50 (10588): Guest Log:  *** Error codes and diagnostics ***
2025-04-12 21:43:50 (10588): Guest Log:     "exeErrorCode": 0,
2025-04-12 21:43:50 (10588): Guest Log:     "exeErrorDiag": "",
2025-04-12 21:43:50 (10588): Guest Log:     "pilotErrorCode": 0,
2025-04-12 21:43:50 (10588): Guest Log:     "pilotErrorDiag": "",
2025-04-12 21:43:50 (10588): Guest Log:  *** Listing of results directory ***
2025-04-12 21:43:50 (10588): Guest Log: total 197540
2025-04-12 21:43:50 (10588): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 12 11:39 pilot3.tar.gz
2025-04-12 21:43:50 (10588): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 12 11:55 runpilot2-wrapper.sh
2025-04-12 21:43:50 (10588): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 12 11:55 queuedata.json
2025-04-12 21:43:50 (10588): Guest Log: -rwxr-xr-x. 1 atlas atlas     11034 Apr 12 20:42 init_data.xml
2025-04-12 21:43:50 (10588): Guest Log: -rwxr-xr-x. 1 atlas atlas    508880 Apr 12 20:42 input.tar.gz
2025-04-12 21:43:50 (10588): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 12 20:42 start_atlas.sh
2025-04-12 21:43:50 (10588): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 12 20:42 EVNT.44075162._001708.pool.root.1 -> /data/./ATLAS.root_0
2025-04-12 21:43:50 (10588): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Apr 12 20:42 pandaJob.out
2025-04-12 21:43:50 (10588): Guest Log: -rw-------. 1 atlas atlas       424 Apr 12 20:42 setup.sh.local
2025-04-12 21:43:50 (10588): Guest Log: -rw-------. 1 atlas atlas    985800 Apr 12 20:44 agis_schedconf.cvmfs.json
2025-04-12 21:43:50 (10588): Guest Log: drwx------. 4 atlas atlas      4096 Apr 12 20:44 pilot3
2025-04-12 21:43:50 (10588): Guest Log: -rw-------. 1 atlas atlas 195282496 Apr 13 01:41 HITS.44075164._044006.pool.root.1
2025-04-12 21:43:50 (10588): Guest Log: -rw-------. 1 atlas atlas      1029 Apr 13 01:42 memory_monitor_summary.json
2025-04-12 21:43:50 (10588): Guest Log: -rw-------. 1 atlas atlas   1603529 Apr 13 01:42 agis_ddmendpoints.agis.ALL.json
2025-04-12 21:43:50 (10588): Guest Log: -rw-------. 1 atlas atlas    363249 Apr 13 01:42 log.44075164._044006.job.log.tgz.1
2025-04-12 21:43:50 (10588): Guest Log: -rw-------. 1 atlas atlas        95 Apr 13 01:43 pilot_heartbeat.json
2025-04-12 21:43:50 (10588): Guest Log: -rw-------. 1 atlas atlas      7719 Apr 13 01:43 heartbeat.json
2025-04-12 21:43:50 (10588): Guest Log: -rw-------. 1 atlas atlas      4536 Apr 13 01:43 pilotlog.txt
2025-04-12 21:43:50 (10588): Guest Log: -rw-------. 1 atlas atlas   1247183 Apr 13 01:43 log.44075164._044006.job.log.1
2025-04-12 21:43:50 (10588): Guest Log: -rw-------. 1 atlas atlas       357 Apr 13 01:43 output.list
2025-04-12 21:43:50 (10588): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 13 01:43 runtime_log
2025-04-12 21:43:50 (10588): Guest Log: -rw-------. 1 atlas atlas   1628160 Apr 13 01:43 result.tar.gz
2025-04-12 21:43:50 (10588): Guest Log: -rw-r--r--. 1 atlas atlas     10906 Apr 13 01:43 runtime_log.err
2025-04-12 21:43:50 (10588): Guest Log: -rw-------. 1 atlas atlas       647 Apr 13 01:43 FKzMDmTdoN7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmENyKDmcSCOYo.diag
2025-04-12 21:43:50 (10588): Guest Log: Looking for outputfile HITS.44075164._044006.pool.root.1
2025-04-12 21:43:50 (10588): Guest Log: HITS file was successfully produced
2025-04-12 21:43:50 (10588): Guest Log: -rw-------. 1 atlas atlas 195282496 Apr 13 01:41 /home/atlas/RunAtlas/HITS.44075164._044006.pool.root.1
2025-04-12 21:43:52 (10588): Guest Log: Successfully finished the ATLAS job!
2025-04-12 21:43:52 (10588): Guest Log: Copying the results back to the shared directory!
2025-04-12 21:43:53 (10588): Guest Log:  *** Contents of shared directory: ***
2025-04-12 21:43:53 (10588): Guest Log: total 407632
2025-04-12 21:43:53 (10588): Guest Log: -rwxrwxrwx. 1 root root 219953845 Apr 12 20:41 ATLAS.root_0
2025-04-12 21:43:53 (10588): Guest Log: -rwxrwxrwx. 1 root root 195282496 Apr 13 01:43 HITS.pool.root.1
2025-04-12 21:43:53 (10588): Guest Log: -rwxrwxrwx. 1 root root     11034 Apr 12 20:41 init_data.xml
2025-04-12 21:43:53 (10588): Guest Log: -rwxrwxrwx. 1 root root    508880 Apr 12 20:41 input.tar.gz
2025-04-12 21:43:53 (10588): Guest Log: -rwxrwxrwx. 1 root root   1628160 Apr 13 01:43 result.tar.gz
2025-04-12 21:43:53 (10588): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 12 20:41 start_atlas.sh
2025-04-12 21:43:53 (10588): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-12 21:43:53 (10588): VM Completion File Detected.
2025-04-12 21:43:53 (10588): Powering off VM.
2025-04-12 21:43:54 (10588): Successfully stopped VM.
2025-04-12 21:43:54 (10588): Deregistering VM. (boinc_7763c6eed70ab562, slot#2)
2025-04-12 21:43:54 (10588): Removing network bandwidth throttle group from VM.
2025-04-12 21:43:54 (10588): Removing VM from VirtualBox.
21:43:59 (10588): called boinc_finish(0)

</stderr_txt>
]]>

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