Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
23:29:10 (487831): wrapper (7.7.26015): starting
23:29:10 (487831): wrapper: running run_atlas (--nthreads 4)
[2025-04-12 23:29:10] Arguments: --nthreads 4
[2025-04-12 23:29:10] Threads: 4
[2025-04-12 23:29:10] Checking for CVMFS
[2025-04-12 23:29:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-12 23:29:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-12 23:29:10] Running cvmfs_config stat atlas.cern.ch
[2025-04-12 23:29:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-12 23:29:10] 2.12.7.0 302542 134 48952 144791 2 56 2165714 4096001 2736 130560 0 486706 99.994 69760 2378 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-12 23:29:10] CVMFS is ok
[2025-04-12 23:29:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-12 23:29:10] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-12 23:29:10] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-12 23:29:10] Further information can be found at the LHC@home message board.
[2025-04-12 23:29:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-12 23:29:10] Checking for apptainer binary...
[2025-04-12 23:29:10] apptainer is not installed, using version from CVMFS
[2025-04-12 23:29:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-12 23:29:10] minis
[2025-04-12 23:29:10] apptainer works
[2025-04-12 23:29:10] Set ATHENA_PROC_NUMBER=4
[2025-04-12 23:29:10] Set ATHENA_CORE_NUMBER=4
[2025-04-12 23:29:10] Starting ATLAS job with PandaID=6600461819
[2025-04-12 23:29:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-13 00:34:37]  *** The last 200 lines of the pilot log: ***
[2025-04-13 00:34:37]  domain=
[2025-04-13 00:34:37]  filesize=246223
[2025-04-13 00:34:37]  filetype=log
[2025-04-13 00:34:37]  guid=bbac04a5-40d7-45e0-bba6-2e61f173b07f
[2025-04-13 00:34:37]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-13 00:34:37]  is_altstaged=None
[2025-04-13 00:34:37]  is_tar=False
[2025-04-13 00:34:37]  lfn=log.44075164._046662.job.log.tgz.1
[2025-04-13 00:34:37]  mtime=0
[2025-04-13 00:34:37]  protocol_id=None
[2025-04-13 00:34:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-13 00:34:37]  replicas=None
[2025-04-13 00:34:37]  scope=mc23_13p6TeV
[2025-04-13 00:34:37]  status=None
[2025-04-13 00:34:37]  status_code=0
[2025-04-13 00:34:37]  storage_token=
[2025-04-13 00:34:37]  surl=/var/lib/boinc-client/slots/4/PanDA_Pilot-6600461819/log.44075164._046662.job.log.tgz.1
[2025-04-13 00:34:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e5/a1/log.44075164._046662.job.log.tgz.1
[2025-04-13 00:34:37]  workdir=None
[2025-04-13 00:34:37] ]
[2025-04-13 00:34:37] 2025-04-12 23:34:17,516 | INFO     | transferring file log.44075164._046662.job.log.tgz.1 from /var/lib/boinc-client/slots/4/PanDA_Pilot-6600461819/log.44075164._046662.job.log.tgz.1 to /var/lib/boinc
[2025-04-13 00:34:37] 2025-04-12 23:34:17,516 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/4/PanDA_Pilot-6600461819/log.44075164._046662.job.log.tgz.1 /var/lib/boinc-client/slots/4/log.440751
[2025-04-13 00:34:37] 2025-04-12 23:34:17,523 | INFO     | adding to output.list: log.44075164._046662.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e5/a1/log.44075164._046662.job.log.tg
[2025-04-13 00:34:37] 2025-04-12 23:34:17,524 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-13 00:34:37] 2025-04-12 23:34:17,524 | INFO     | summary of transferred files:
[2025-04-13 00:34:37] 2025-04-12 23:34:17,524 | INFO     |  -- lfn=log.44075164._046662.job.log.tgz.1, status_code=0, status=transferred
[2025-04-13 00:34:37] 2025-04-12 23:34:17,524 | INFO     | stage-out finished correctly
[2025-04-13 00:34:37] 2025-04-12 23:34:18,435 | INFO     | monitor loop #301: job 0:6600461819 is in state 'finished'
[2025-04-13 00:34:37] 2025-04-12 23:34:18,435 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-13 00:34:37] 2025-04-12 23:34:20,661 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-13 00:34:37] 2025-04-12 23:34:20,938 | INFO     | monitor loop #302: job 0:6600461819 is in state 'finished'
[2025-04-13 00:34:37] 2025-04-12 23:34:20,938 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-13 00:34:37] 2025-04-12 23:34:21,795 | INFO     | job 6600461819 has state=finished
[2025-04-13 00:34:37] 2025-04-12 23:34:21,795 | INFO     | preparing for final server update for job 6600461819 in state='finished'
[2025-04-13 00:34:37] 2025-04-12 23:34:21,795 | INFO     | this job has now completed (state=finished)
[2025-04-13 00:34:37] 2025-04-12 23:34:21,795 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-13 00:34:37] 2025-04-12 23:34:21,795 | INFO     | log transfer has been attempted: DONE
[2025-04-13 00:34:37] 2025-04-12 23:34:21,795 | INFO     | job 6600461819 has finished - writing final server update
[2025-04-13 00:34:37] 2025-04-12 23:34:21,796 | INFO     | total number of processed events: 400 (read)
[2025-04-13 00:34:37] 2025-04-12 23:34:21,796 | INFO     | executing command: lscpu
[2025-04-13 00:34:37] 2025-04-12 23:34:21,808 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-13 00:34:37] 2025-04-12 23:34:22,627 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-13 00:34:37] 2025-04-12 23:34:22,627 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6600461819/memory_monitor_summary.json (trf name=prmon)
[2025-04-13 00:34:37] 2025-04-12 23:34:22,627 | INFO     | extracted standard info from prmon json
[2025-04-13 00:34:37] 2025-04-12 23:34:22,627 | INFO     | extracted standard memory fields from prmon json
[2025-04-13 00:34:37] 2025-04-12 23:34:22,627 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-13 00:34:37] 2025-04-12 23:34:22,628 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-13 00:34:37] 2025-04-12 23:34:22,628 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-13 00:34:37] 2025-04-12 23:34:22,628 | INFO     | fitting pss+swap vs Time
[2025-04-13 00:34:37] 2025-04-12 23:34:22,628 | INFO     | sum of square deviations: 57407588.0
[2025-04-13 00:34:37] 2025-04-12 23:34:22,628 | INFO     | sum of deviations: 8678468353.000004
[2025-04-13 00:34:37] 2025-04-12 23:34:22,628 | INFO     | mean x: 1744498983.0
[2025-04-13 00:34:37] 2025-04-12 23:34:22,628 | INFO     | mean y: 2278530.50877193
[2025-04-13 00:34:37] 2025-04-12 23:34:22,628 | INFO     | -- intersect: -263718594323.55005
[2025-04-13 00:34:37] 2025-04-12 23:34:22,628 | INFO     | intersect: -263718594323.55005
[2025-04-13 00:34:37] 2025-04-12 23:34:22,628 | INFO     | chi2: 1.250892262607356
[2025-04-13 00:34:37] 2025-04-12 23:34:22,628 | INFO     | -- intersect: -263718594323.55005
[2025-04-13 00:34:37] 2025-04-12 23:34:22,628 | INFO     | current memory leak: 151.17 B/s (using 57 data points, chi2=1.25)
[2025-04-13 00:34:37] 2025-04-12 23:34:22,629 | INFO     | ..............................
[2025-04-13 00:34:37] 2025-04-12 23:34:22,629 | INFO     | . Timing measurements:
[2025-04-13 00:34:37] 2025-04-12 23:34:22,629 | INFO     | . get job = 0 s
[2025-04-13 00:34:37] 2025-04-12 23:34:22,629 | INFO     | . initial setup = 1 s
[2025-04-13 00:34:37] 2025-04-12 23:34:22,629 | INFO     | . payload setup = 1 s
[2025-04-13 00:34:37] 2025-04-12 23:34:22,629 | INFO     | . stage-in = 0 s
[2025-04-13 00:34:37] 2025-04-12 23:34:22,629 | INFO     | . payload execution = 3884 s
[2025-04-13 00:34:37] 2025-04-12 23:34:22,629 | INFO     | . stage-out = 0 s
[2025-04-13 00:34:37] 2025-04-12 23:34:22,629 | INFO     | . log creation = 0 s
[2025-04-13 00:34:37] 2025-04-12 23:34:22,629 | INFO     | ..............................
[2025-04-13 00:34:37] 2025-04-12 23:34:22,735 | INFO     | 
[2025-04-13 00:34:37] 2025-04-12 23:34:22,735 | INFO     | job summary report
[2025-04-13 00:34:37] 2025-04-12 23:34:22,735 | INFO     | --------------------------------------------------
[2025-04-13 00:34:37] 2025-04-12 23:34:22,735 | INFO     | PanDA job id: 6600461819
[2025-04-13 00:34:37] 2025-04-12 23:34:22,735 | INFO     | task id: 44075164
[2025-04-13 00:34:37] 2025-04-12 23:34:22,735 | INFO     | errors: (none)
[2025-04-13 00:34:37] 2025-04-12 23:34:22,735 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-13 00:34:37] 2025-04-12 23:34:22,735 | INFO     | pilot state: finished 
[2025-04-13 00:34:37] 2025-04-12 23:34:22,735 | INFO     | transexitcode: 0
[2025-04-13 00:34:37] 2025-04-12 23:34:22,735 | INFO     | exeerrorcode: 0
[2025-04-13 00:34:37] 2025-04-12 23:34:22,735 | INFO     | exeerrordiag: 
[2025-04-13 00:34:37] 2025-04-12 23:34:22,735 | INFO     | exitcode: 0
[2025-04-13 00:34:37] 2025-04-12 23:34:22,735 | INFO     | exitmsg: OK
[2025-04-13 00:34:37] 2025-04-12 23:34:22,735 | INFO     | cpuconsumptiontime: 12869 s
[2025-04-13 00:34:37] 2025-04-12 23:34:22,735 | INFO     | nevents: 400
[2025-04-13 00:34:37] 2025-04-12 23:34:22,735 | INFO     | neventsw: 0
[2025-04-13 00:34:37] 2025-04-12 23:34:22,735 | INFO     | pid: 498249
[2025-04-13 00:34:37] 2025-04-12 23:34:22,735 | INFO     | pgrp: 498249
[2025-04-13 00:34:37] 2025-04-12 23:34:22,735 | INFO     | corecount: 4
[2025-04-13 00:34:37] 2025-04-12 23:34:22,735 | INFO     | event service: False
[2025-04-13 00:34:37] 2025-04-12 23:34:22,736 | INFO     | sizes: {0: 2417334, 1: 2417540, 10: 2417568, 3890: 2443393, 3891: 2452348, 3894: 2452404, 3896: 2452702}
[2025-04-13 00:34:37] 2025-04-12 23:34:22,736 | INFO     | --------------------------------------------------
[2025-04-13 00:34:37] 2025-04-12 23:34:22,736 | INFO     | 
[2025-04-13 00:34:37] 2025-04-12 23:34:22,736 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2025-04-13 00:34:37] 2025-04-12 23:34:22,743 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-13 00:34:37] 2025-04-12 23:34:22,743 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-13 00:34:37] 2025-04-12 23:34:22,743 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-13 00:34:37] 2025-04-12 23:34:22,743 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-13 00:34:37] 2025-04-12 23:34:22,743 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-13 00:34:37] 2025-04-12 23:34:22,743 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-13 00:34:37] 2025-04-12 23:34:22,743 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-13 00:34:37] 2025-04-12 23:34:22,743 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-13 00:34:37] 2025-04-12 23:34:22,743 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-13 00:34:37] 2025-04-12 23:34:22,743 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-13 00:34:37] 2025-04-12 23:34:22,743 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-13 00:34:37] 2025-04-12 23:34:22,743 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-13 00:34:37] 2025-04-12 23:34:22,743 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-13 00:34:37] 2025-04-12 23:34:22,743 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-13 00:34:37] 2025-04-12 23:34:22,743 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-13 00:34:37] 2025-04-12 23:34:22,743 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-13 00:34:37] 2025-04-12 23:34:22,743 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-13 00:34:37] 2025-04-12 23:34:22,743 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-13 00:34:37] 2025-04-12 23:34:22,743 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-13 00:34:37] 2025-04-12 23:34:22,743 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-13 00:34:37] 2025-04-12 23:34:22,743 | INFO     | job 6600461819 has completed (purged errors)
[2025-04-13 00:34:37] 2025-04-12 23:34:22,743 | INFO     | overall cleanup function is called
[2025-04-13 00:34:37] 2025-04-12 23:34:23,749 | INFO     | --- collectZombieJob: --- 10, [498249]
[2025-04-13 00:34:37] 2025-04-12 23:34:23,749 | INFO     | zombie collector waiting for pid 498249
[2025-04-13 00:34:37] 2025-04-12 23:34:23,749 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-13 00:34:37] 2025-04-12 23:34:23,749 | INFO     | collected zombie processes
[2025-04-13 00:34:37] 2025-04-12 23:34:23,749 | INFO     | will attempt to kill all subprocesses of pid=498249
[2025-04-13 00:34:37] 2025-04-12 23:34:23,779 | INFO     | process IDs to be killed: [498249] (in reverse order)
[2025-04-13 00:34:37] 2025-04-12 23:34:23,796 | WARNING  | found no corresponding commands to process id(s)
[2025-04-13 00:34:37] 2025-04-12 23:34:23,796 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-13 00:34:37] 2025-04-12 23:34:23,797 | INFO     | did not find any defunct processes belonging to 498249
[2025-04-13 00:34:37] 2025-04-12 23:34:23,798 | INFO     | did not find any defunct processes belonging to 498249
[2025-04-13 00:34:37] 2025-04-12 23:34:23,798 | INFO     | ready for new job
[2025-04-13 00:34:37] 2025-04-12 23:34:23,798 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-13 00:34:37] 2025-04-12 23:34:23,799 | INFO     | **************************************
[2025-04-13 00:34:37] 2025-04-12 23:34:23,799 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-13 00:34:37] 2025-04-12 23:34:23,799 | INFO     | **************************************
[2025-04-13 00:34:37] 2025-04-12 23:34:23,799 | INFO     | 
[2025-04-13 00:34:37] 2025-04-12 23:34:23,799 | INFO     | architecture information:
[2025-04-13 00:34:37] 2025-04-12 23:34:23,799 | INFO     | executing command: cat /etc/os-release
[2025-04-13 00:34:37] 2025-04-12 23:34:23,803 | INFO     | cat /etc/os-release:
[2025-04-13 00:34:37] NAME="CentOS Linux"
[2025-04-13 00:34:37] VERSION="7 (Core)"
[2025-04-13 00:34:37] ID="centos"
[2025-04-13 00:34:37] ID_LIKE="rhel fedora"
[2025-04-13 00:34:37] VERSION_ID="7"
[2025-04-13 00:34:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-13 00:34:37] ANSI_COLOR="0;31"
[2025-04-13 00:34:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-13 00:34:37] HOME_URL="https://www.centos.org/"
[2025-04-13 00:34:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-13 00:34:37] 
[2025-04-13 00:34:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-13 00:34:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-13 00:34:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-13 00:34:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-13 00:34:37] 
[2025-04-13 00:34:37] 2025-04-12 23:34:23,803 | INFO     | **************************************
[2025-04-13 00:34:37] 2025-04-12 23:34:24,304 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2025-04-13 00:34:37] 2025-04-12 23:34:24,310 | INFO     | sufficient remaining disk space (62763565056 B)
[2025-04-13 00:34:37] 2025-04-12 23:34:24,310 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-13 00:34:37] 2025-04-12 23:34:24,310 | INFO     | current server update state: UPDATING_FINAL
[2025-04-13 00:34:37] 2025-04-12 23:34:24,310 | INFO     | update_server=False
[2025-04-13 00:34:37] 2025-04-12 23:34:24,310 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-13 00:34:37] 2025-04-12 23:34:24,311 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-13 00:34:37] 2025-04-12 23:34:24,446 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-13 00:34:37] 2025-04-12 23:34:24,446 | INFO     | aborting loop
[2025-04-13 00:34:37] 2025-04-12 23:34:24,865 | INFO     | all payload control threads have been joined
[2025-04-13 00:34:37] 2025-04-12 23:34:24,874 | INFO     | found 0 job(s) in 20 queues
[2025-04-13 00:34:37] 2025-04-12 23:34:24,874 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-13 00:34:37] 2025-04-12 23:34:24,874 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-13 00:34:37] 2025-04-12 23:34:25,163 | INFO     | all job control threads have been joined
[2025-04-13 00:34:37] 2025-04-12 23:34:25,183 | INFO     | all data control threads have been joined
[2025-04-13 00:34:37] 2025-04-12 23:34:25,316 | INFO     | [job] retrieve thread has finished
[2025-04-13 00:34:37] 2025-04-12 23:34:25,316 | INFO     | [job] queue monitor thread has finished
[2025-04-13 00:34:37] 2025-04-12 23:34:25,322 | INFO     | [job] create_data_payload thread has finished
[2025-04-13 00:34:37] 2025-04-12 23:34:25,342 | INFO     | [payload] validate_pre thread has finished
[2025-04-13 00:34:37] 2025-04-12 23:34:25,384 | INFO     | [payload] validate_post thread has finished
[2025-04-13 00:34:37] 2025-04-12 23:34:25,451 | INFO     | [job] job monitor thread has finished
[2025-04-13 00:34:37] 2025-04-12 23:34:25,558 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-13 00:34:37] 2025-04-12 23:34:25,853 | INFO     | [payload] execute_payloads thread has finished
[2025-04-13 00:34:37] 2025-04-12 23:34:25,867 | INFO     | [payload] control thread has finished
[2025-04-13 00:34:37] 2025-04-12 23:34:26,167 | INFO     | [job] control thread has finished
[2025-04-13 00:34:37] 2025-04-12 23:34:26,188 | INFO     | [data] control thread has finished
[2025-04-13 00:34:37] 2025-04-12 23:34:26,394 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-13 00:34:37] 2025-04-12 23:34:26,441 | INFO     | [payload] failed_post thread has finished
[2025-04-13 00:34:37] 2025-04-12 23:34:26,652 | INFO     | [data] copytool_in thread has finished
[2025-04-13 00:34:37] 2025-04-12 23:34:26,690 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-13 00:34:37] 2025-04-12 23:34:26,745 | INFO     | [job] validate thread has finished
[2025-04-13 00:34:37] 2025-04-12 23:34:27,563 | INFO     | [data] copytool_out thread has finished
[2025-04-13 00:34:37] 2025-04-12 23:34:30,695 | INFO     | [data] queue_monitor thread has finished
[2025-04-13 00:34:37] 2025-04-12 23:34:32,254 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137548787099456)>', '<ExcThread(monitor, started 137548433172224)>']
[2025-04-13 00:34:37] 2025-04-12 23:34:32,910 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-13 00:34:37] 2025-04-12 23:34:32,910 | INFO     | [monitor] control thread has ended
[2025-04-13 00:34:37] 2025-04-12 23:34:37,266 | INFO     | all workflow threads have been joined
[2025-04-13 00:34:37] 2025-04-12 23:34:37,266 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-13 00:34:37] 2025-04-12 23:34:37,266 | INFO     | traces error code: 0
[2025-04-13 00:34:37] 2025-04-12 23:34:37,266 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-13 00:34:37] 2025-04-12 23:34:37,303 [wrapper] ==== pilot stdout END ====
[2025-04-13 00:34:37] 2025-04-12 23:34:37,304 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-13 00:34:37] 2025-04-12 23:34:37,305 [wrapper] pilotpid: 491601
[2025-04-13 00:34:37] 2025-04-12 23:34:37,306 [wrapper] Pilot exit status: 0
[2025-04-13 00:34:37] 2025-04-12 23:34:37,309 [wrapper] pandaids: 6600461819
[2025-04-13 00:34:37] 2025-04-12 23:34:37,318 [wrapper] cleanup supervisor_pilot  578921 491602
[2025-04-13 00:34:37] 2025-04-12 23:34:37,319 [wrapper] Test setup, not cleaning
[2025-04-13 00:34:37] 2025-04-12 23:34:37,320 [wrapper] apfmon messages muted
[2025-04-13 00:34:37] 2025-04-12 23:34:37,320 [wrapper] ==== wrapper stdout END ====
[2025-04-13 00:34:37] 2025-04-12 23:34:37,321 [wrapper] ==== wrapper stderr END ====
[2025-04-13 00:34:37]  *** Error codes and diagnostics ***
[2025-04-13 00:34:37]     "exeErrorCode": 0,
[2025-04-13 00:34:37]     "exeErrorDiag": "",
[2025-04-13 00:34:37]     "pilotErrorCode": 0,
[2025-04-13 00:34:37]     "pilotErrorDiag": "",
[2025-04-13 00:34:37]  *** Listing of results directory ***
[2025-04-13 00:34:37] total 411840
[2025-04-13 00:34:37] -rw-r--r-- 1 boinc boinc    495897 Apr 12 17:10 pilot3.tar.gz
[2025-04-13 00:34:37] -rwx------ 1 boinc boinc     37140 Apr 12 17:39 runpilot2-wrapper.sh
[2025-04-13 00:34:37] -rw-r--r-- 1 boinc boinc      5111 Apr 12 17:39 queuedata.json
[2025-04-13 00:34:37] -rw-r--r-- 1 boinc boinc       100 Apr 12 23:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-13 00:34:37] -rwxr-xr-x 1 boinc boinc      7986 Apr 12 23:29 run_atlas
[2025-04-13 00:34:37] -rw-r--r-- 1 boinc boinc       105 Apr 12 23:29 job.xml
[2025-04-13 00:34:37] -rw-r--r-- 2 boinc boinc     17569 Apr 12 23:29 start_atlas.sh
[2025-04-13 00:34:37] drwxrwx--x 1 boinc boinc        76 Apr 12 23:29 shared
[2025-04-13 00:34:37] -rw-r--r-- 2 boinc boinc    508879 Apr 12 23:29 input.tar.gz
[2025-04-13 00:34:37] -rw-r--r-- 2 boinc boinc 222595408 Apr 12 23:29 EVNT.44075162._001814.pool.root.1
[2025-04-13 00:34:37] -rw-r--r-- 1 boinc boinc         0 Apr 12 23:29 boinc_lockfile
[2025-04-13 00:34:37] -rw-r--r-- 1 boinc boinc      2550 Apr 12 23:29 pandaJob.out
[2025-04-13 00:34:37] -rw------- 1 boinc boinc       424 Apr 12 23:29 setup.sh.local
[2025-04-13 00:34:37] -rw------- 1 boinc boinc    985800 Apr 12 23:29 agis_schedconf.cvmfs.json
[2025-04-13 00:34:37] -rw------- 1 boinc boinc   1603529 Apr 12 23:29 agis_ddmendpoints.agis.ALL.json
[2025-04-13 00:34:37] drwx------ 1 boinc boinc       368 Apr 12 23:29 pilot3
[2025-04-13 00:34:37] -rw-r--r-- 1 boinc boinc      6798 Apr 13 00:10 init_data.xml
[2025-04-13 00:34:37] -rw------- 1 boinc boinc        95 Apr 13 00:33 pilot_heartbeat.json
[2025-04-13 00:34:37] -rw------- 1 boinc boinc 193993340 Apr 13 00:33 HITS.44075164._046662.pool.root.1
[2025-04-13 00:34:37] -rw-r--r-- 1 boinc boinc       530 Apr 13 00:34 boinc_task_state.xml
[2025-04-13 00:34:37] -rw------- 1 boinc boinc      1024 Apr 13 00:34 memory_monitor_summary.json
[2025-04-13 00:34:37] -rw------- 1 boinc boinc    246223 Apr 13 00:34 log.44075164._046662.job.log.tgz.1
[2025-04-13 00:34:37] -rw------- 1 boinc boinc      7658 Apr 13 00:34 heartbeat.json
[2025-04-13 00:34:37] -rw-r--r-- 1 boinc boinc      8192 Apr 13 00:34 boinc_mmap_file
[2025-04-13 00:34:37] -rw-r--r-- 1 boinc boinc        27 Apr 13 00:34 wrapper_checkpoint.txt
[2025-04-13 00:34:37] -rw------- 1 boinc boinc      4360 Apr 13 00:34 pilotlog.txt
[2025-04-13 00:34:37] -rw------- 1 boinc boinc    406322 Apr 13 00:34 log.44075164._046662.job.log.1
[2025-04-13 00:34:37] -rw------- 1 boinc boinc       357 Apr 13 00:34 output.list
[2025-04-13 00:34:37] -rw-r--r-- 1 boinc boinc       620 Apr 13 00:34 runtime_log
[2025-04-13 00:34:37] -rw------- 1 boinc boinc    675840 Apr 13 00:34 result.tar.gz
[2025-04-13 00:34:37] -rw-r--r-- 1 boinc boinc     11107 Apr 13 00:34 runtime_log.err
[2025-04-13 00:34:37] -rw------- 1 boinc boinc       644 Apr 13 00:34 jQeNDmz3sN7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmnayKDmFH57Fo.diag
[2025-04-13 00:34:37] -rw-r--r-- 1 boinc boinc     21121 Apr 13 00:34 stderr.txt
[2025-04-13 00:34:37] HITS file was successfully produced:
[2025-04-13 00:34:37] -rw------- 1 boinc boinc 193993340 Apr 13 00:33 shared/HITS.pool.root.1
[2025-04-13 00:34:37]  *** Contents of shared directory: ***
[2025-04-13 00:34:37] total 408008
[2025-04-13 00:34:37] -rw-r--r-- 2 boinc boinc     17569 Apr 12 23:29 start_atlas.sh
[2025-04-13 00:34:37] -rw-r--r-- 2 boinc boinc    508879 Apr 12 23:29 input.tar.gz
[2025-04-13 00:34:37] -rw-r--r-- 2 boinc boinc 222595408 Apr 12 23:29 ATLAS.root_0
[2025-04-13 00:34:37] -rw------- 1 boinc boinc 193993340 Apr 13 00:33 HITS.pool.root.1
[2025-04-13 00:34:37] -rw------- 1 boinc boinc    675840 Apr 13 00:34 result.tar.gz
00:34:38 (487831): run_atlas exited; CPU time 12893.078346
00:34:38 (487831): called boinc_finish(0)

</stderr_txt>
]]>

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