Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
22:25:31 (411252): wrapper (7.7.26015): starting
22:25:31 (411252): wrapper: running run_atlas (--nthreads 4)
[2025-04-12 22:25:31] Arguments: --nthreads 4
[2025-04-12 22:25:31] Threads: 4
[2025-04-12 22:25:31] Checking for CVMFS
[2025-04-12 22:25:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-12 22:25:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-12 22:25:31] Running cvmfs_config stat atlas.cern.ch
[2025-04-12 22:25:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-12 22:25:31] 2.12.7.0 302542 70 49144 144788 1 186 2153082 4096001 2488 130560 0 283371 99.991 67407 2569 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-12 22:25:31] CVMFS is ok
[2025-04-12 22:25:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-12 22:25:31] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-12 22:25:31] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-12 22:25:31] Further information can be found at the LHC@home message board.
[2025-04-12 22:25:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-12 22:25:31] Checking for apptainer binary...
[2025-04-12 22:25:31] apptainer is not installed, using version from CVMFS
[2025-04-12 22:25:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-12 22:25:31] minis
[2025-04-12 22:25:31] apptainer works
[2025-04-12 22:25:31] Set ATHENA_PROC_NUMBER=4
[2025-04-12 22:25:31] Set ATHENA_CORE_NUMBER=4
[2025-04-12 22:25:31] Starting ATLAS job with PandaID=6600421498
[2025-04-12 22:25:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-12 23:32:22]  *** The last 200 lines of the pilot log: ***
[2025-04-12 23:32:22]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-12 23:32:22]  is_altstaged=None
[2025-04-12 23:32:22]  is_tar=False
[2025-04-12 23:32:22]  lfn=log.44075164._044002.job.log.tgz.1
[2025-04-12 23:32:22]  mtime=0
[2025-04-12 23:32:22]  protocol_id=None
[2025-04-12 23:32:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-12 23:32:22]  replicas=None
[2025-04-12 23:32:22]  scope=mc23_13p6TeV
[2025-04-12 23:32:22]  status=None
[2025-04-12 23:32:22]  status_code=0
[2025-04-12 23:32:22]  storage_token=
[2025-04-12 23:32:22]  surl=/var/lib/boinc-client/slots/5/PanDA_Pilot-6600421498/log.44075164._044002.job.log.tgz.1
[2025-04-12 23:32:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/32/e8/log.44075164._044002.job.log.tgz.1
[2025-04-12 23:32:22]  workdir=None
[2025-04-12 23:32:22] ]
[2025-04-12 23:32:22] 2025-04-12 22:32:04,972 | INFO     | transferring file log.44075164._044002.job.log.tgz.1 from /var/lib/boinc-client/slots/5/PanDA_Pilot-6600421498/log.44075164._044002.job.log.tgz.1 to /var/lib/boinc
[2025-04-12 23:32:22] 2025-04-12 22:32:04,972 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/5/PanDA_Pilot-6600421498/log.44075164._044002.job.log.tgz.1 /var/lib/boinc-client/slots/5/log.440751
[2025-04-12 23:32:22] 2025-04-12 22:32:04,979 | INFO     | adding to output.list: log.44075164._044002.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/32/e8/log.44075164._044002.job.log.tg
[2025-04-12 23:32:22] 2025-04-12 22:32:04,979 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-12 23:32:22] 2025-04-12 22:32:04,979 | INFO     | summary of transferred files:
[2025-04-12 23:32:22] 2025-04-12 22:32:04,979 | INFO     |  -- lfn=log.44075164._044002.job.log.tgz.1, status_code=0, status=transferred
[2025-04-12 23:32:22] 2025-04-12 22:32:04,979 | INFO     | stage-out finished correctly
[2025-04-12 23:32:22] 2025-04-12 22:32:05,331 | INFO     | monitor loop #308: job 0:6600421498 is in state 'finished'
[2025-04-12 23:32:22] 2025-04-12 22:32:05,331 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 23:32:22] 2025-04-12 22:32:06,140 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-12 23:32:22] 2025-04-12 22:32:06,167 | INFO     | job 6600421498 has state=finished
[2025-04-12 23:32:22] 2025-04-12 22:32:06,167 | INFO     | preparing for final server update for job 6600421498 in state='finished'
[2025-04-12 23:32:22] 2025-04-12 22:32:07,035 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-04-12 23:32:22] 2025-04-12 22:32:07,035 | INFO     | this job has now completed (state=finished)
[2025-04-12 23:32:22] 2025-04-12 22:32:07,035 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-12 23:32:22] 2025-04-12 22:32:07,035 | INFO     | log transfer has been attempted: DONE
[2025-04-12 23:32:22] 2025-04-12 22:32:07,035 | INFO     | job 6600421498 has finished - writing final server update
[2025-04-12 23:32:22] 2025-04-12 22:32:07,035 | INFO     | total number of processed events: 400 (read)
[2025-04-12 23:32:22] 2025-04-12 22:32:07,036 | INFO     | executing command: lscpu
[2025-04-12 23:32:22] 2025-04-12 22:32:07,045 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-12 23:32:22] 2025-04-12 22:32:07,834 | INFO     | monitor loop #309: job 0:6600421498 is in state 'finished'
[2025-04-12 23:32:22] 2025-04-12 22:32:07,834 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 23:32:22] 2025-04-12 22:32:08,146 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-12 23:32:22] 2025-04-12 22:32:08,146 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6600421498/memory_monitor_summary.json (trf name=prmon)
[2025-04-12 23:32:22] 2025-04-12 22:32:08,147 | INFO     | extracted standard info from prmon json
[2025-04-12 23:32:22] 2025-04-12 22:32:08,147 | INFO     | extracted standard memory fields from prmon json
[2025-04-12 23:32:22] 2025-04-12 22:32:08,147 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-12 23:32:22] 2025-04-12 22:32:08,147 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-12 23:32:22] 2025-04-12 22:32:08,147 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-12 23:32:22] 2025-04-12 22:32:08,148 | INFO     | fitting pss+swap vs Time
[2025-04-12 23:32:22] 2025-04-12 22:32:08,148 | INFO     | sum of square deviations: 63666310.0
[2025-04-12 23:32:22] 2025-04-12 22:32:08,148 | INFO     | sum of deviations: 9471115590.0
[2025-04-12 23:32:22] 2025-04-12 22:32:08,148 | INFO     | mean x: 1744495224.0
[2025-04-12 23:32:22] 2025-04-12 22:32:08,148 | INFO     | mean y: 2261859.0508474577
[2025-04-12 23:32:22] 2025-04-12 22:32:08,148 | INFO     | -- intersect: -259512007347.17365
[2025-04-12 23:32:22] 2025-04-12 22:32:08,148 | INFO     | intersect: -259512007347.17365
[2025-04-12 23:32:22] 2025-04-12 22:32:08,148 | INFO     | chi2: 1.3944870951735886
[2025-04-12 23:32:22] 2025-04-12 22:32:08,148 | INFO     | -- intersect: -259512007347.17365
[2025-04-12 23:32:22] 2025-04-12 22:32:08,148 | INFO     | current memory leak: 148.76 B/s (using 59 data points, chi2=1.39)
[2025-04-12 23:32:22] 2025-04-12 22:32:08,148 | INFO     | ..............................
[2025-04-12 23:32:22] 2025-04-12 22:32:08,148 | INFO     | . Timing measurements:
[2025-04-12 23:32:22] 2025-04-12 22:32:08,148 | INFO     | . get job = 0 s
[2025-04-12 23:32:22] 2025-04-12 22:32:08,148 | INFO     | . initial setup = 1 s
[2025-04-12 23:32:22] 2025-04-12 22:32:08,148 | INFO     | . payload setup = 1 s
[2025-04-12 23:32:22] 2025-04-12 22:32:08,148 | INFO     | . stage-in = 0 s
[2025-04-12 23:32:22] 2025-04-12 22:32:08,148 | INFO     | . payload execution = 3972 s
[2025-04-12 23:32:22] 2025-04-12 22:32:08,148 | INFO     | . stage-out = 0 s
[2025-04-12 23:32:22] 2025-04-12 22:32:08,148 | INFO     | . log creation = 0 s
[2025-04-12 23:32:22] 2025-04-12 22:32:08,148 | INFO     | ..............................
[2025-04-12 23:32:22] 2025-04-12 22:32:08,279 | INFO     | 
[2025-04-12 23:32:22] 2025-04-12 22:32:08,279 | INFO     | job summary report
[2025-04-12 23:32:22] 2025-04-12 22:32:08,279 | INFO     | --------------------------------------------------
[2025-04-12 23:32:22] 2025-04-12 22:32:08,279 | INFO     | PanDA job id: 6600421498
[2025-04-12 23:32:22] 2025-04-12 22:32:08,279 | INFO     | task id: 44075164
[2025-04-12 23:32:22] 2025-04-12 22:32:08,279 | INFO     | errors: (none)
[2025-04-12 23:32:22] 2025-04-12 22:32:08,279 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-12 23:32:22] 2025-04-12 22:32:08,279 | INFO     | pilot state: finished 
[2025-04-12 23:32:22] 2025-04-12 22:32:08,279 | INFO     | transexitcode: 0
[2025-04-12 23:32:22] 2025-04-12 22:32:08,279 | INFO     | exeerrorcode: 0
[2025-04-12 23:32:22] 2025-04-12 22:32:08,279 | INFO     | exeerrordiag: 
[2025-04-12 23:32:22] 2025-04-12 22:32:08,279 | INFO     | exitcode: 0
[2025-04-12 23:32:22] 2025-04-12 22:32:08,279 | INFO     | exitmsg: OK
[2025-04-12 23:32:22] 2025-04-12 22:32:08,279 | INFO     | cpuconsumptiontime: 13202 s
[2025-04-12 23:32:22] 2025-04-12 22:32:08,279 | INFO     | nevents: 400
[2025-04-12 23:32:22] 2025-04-12 22:32:08,279 | INFO     | neventsw: 0
[2025-04-12 23:32:22] 2025-04-12 22:32:08,279 | INFO     | pid: 423777
[2025-04-12 23:32:22] 2025-04-12 22:32:08,279 | INFO     | pgrp: 423777
[2025-04-12 23:32:22] 2025-04-12 22:32:08,279 | INFO     | corecount: 4
[2025-04-12 23:32:22] 2025-04-12 22:32:08,279 | INFO     | event service: False
[2025-04-12 23:32:22] 2025-04-12 22:32:08,279 | INFO     | sizes: {0: 2417163, 1: 2417362, 2: 2417568, 11: 2417596, 3977: 2443449, 3979: 2452404, 3980: 2452588, 3982: 2452758}
[2025-04-12 23:32:22] 2025-04-12 22:32:08,279 | INFO     | --------------------------------------------------
[2025-04-12 23:32:22] 2025-04-12 22:32:08,279 | INFO     | 
[2025-04-12 23:32:22] 2025-04-12 22:32:08,279 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2025-04-12 23:32:22] 2025-04-12 22:32:08,286 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-12 23:32:22] 2025-04-12 22:32:08,286 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-12 23:32:22] 2025-04-12 22:32:08,286 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-12 23:32:22] 2025-04-12 22:32:08,287 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-12 23:32:22] 2025-04-12 22:32:08,287 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-12 23:32:22] 2025-04-12 22:32:08,287 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-12 23:32:22] 2025-04-12 22:32:08,287 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-12 23:32:22] 2025-04-12 22:32:08,287 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-12 23:32:22] 2025-04-12 22:32:08,287 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-12 23:32:22] 2025-04-12 22:32:08,287 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-12 23:32:22] 2025-04-12 22:32:08,287 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-12 23:32:22] 2025-04-12 22:32:08,287 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-12 23:32:22] 2025-04-12 22:32:08,287 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-12 23:32:22] 2025-04-12 22:32:08,287 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-12 23:32:22] 2025-04-12 22:32:08,287 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-12 23:32:22] 2025-04-12 22:32:08,287 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-12 23:32:22] 2025-04-12 22:32:08,287 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-12 23:32:22] 2025-04-12 22:32:08,287 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-12 23:32:22] 2025-04-12 22:32:08,287 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-12 23:32:22] 2025-04-12 22:32:08,287 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-12 23:32:22] 2025-04-12 22:32:08,287 | INFO     | job 6600421498 has completed (purged errors)
[2025-04-12 23:32:22] 2025-04-12 22:32:08,287 | INFO     | overall cleanup function is called
[2025-04-12 23:32:22] 2025-04-12 22:32:09,293 | INFO     | --- collectZombieJob: --- 10, [423777]
[2025-04-12 23:32:22] 2025-04-12 22:32:09,293 | INFO     | zombie collector waiting for pid 423777
[2025-04-12 23:32:22] 2025-04-12 22:32:09,293 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-12 23:32:22] 2025-04-12 22:32:09,293 | INFO     | collected zombie processes
[2025-04-12 23:32:22] 2025-04-12 22:32:09,293 | INFO     | will attempt to kill all subprocesses of pid=423777
[2025-04-12 23:32:22] 2025-04-12 22:32:09,326 | INFO     | process IDs to be killed: [423777] (in reverse order)
[2025-04-12 23:32:22] 2025-04-12 22:32:09,343 | WARNING  | found no corresponding commands to process id(s)
[2025-04-12 23:32:22] 2025-04-12 22:32:09,343 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-12 23:32:22] 2025-04-12 22:32:09,344 | INFO     | did not find any defunct processes belonging to 423777
[2025-04-12 23:32:22] 2025-04-12 22:32:09,345 | INFO     | did not find any defunct processes belonging to 423777
[2025-04-12 23:32:22] 2025-04-12 22:32:09,345 | INFO     | ready for new job
[2025-04-12 23:32:22] 2025-04-12 22:32:09,345 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-12 23:32:22] 2025-04-12 22:32:09,345 | INFO     | **************************************
[2025-04-12 23:32:22] 2025-04-12 22:32:09,346 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-12 23:32:22] 2025-04-12 22:32:09,346 | INFO     | **************************************
[2025-04-12 23:32:22] 2025-04-12 22:32:09,346 | INFO     | 
[2025-04-12 23:32:22] 2025-04-12 22:32:09,346 | INFO     | architecture information:
[2025-04-12 23:32:22] 2025-04-12 22:32:09,346 | INFO     | executing command: cat /etc/os-release
[2025-04-12 23:32:22] 2025-04-12 22:32:09,351 | INFO     | cat /etc/os-release:
[2025-04-12 23:32:22] NAME="CentOS Linux"
[2025-04-12 23:32:22] VERSION="7 (Core)"
[2025-04-12 23:32:22] ID="centos"
[2025-04-12 23:32:22] ID_LIKE="rhel fedora"
[2025-04-12 23:32:22] VERSION_ID="7"
[2025-04-12 23:32:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-12 23:32:22] ANSI_COLOR="0;31"
[2025-04-12 23:32:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-12 23:32:22] HOME_URL="https://www.centos.org/"
[2025-04-12 23:32:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-12 23:32:22] 
[2025-04-12 23:32:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-12 23:32:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-12 23:32:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-12 23:32:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-12 23:32:22] 
[2025-04-12 23:32:22] 2025-04-12 22:32:09,351 | INFO     | **************************************
[2025-04-12 23:32:22] 2025-04-12 22:32:09,854 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2025-04-12 23:32:22] 2025-04-12 22:32:09,860 | INFO     | sufficient remaining disk space (62482546688 B)
[2025-04-12 23:32:22] 2025-04-12 22:32:09,860 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-12 23:32:22] 2025-04-12 22:32:09,860 | INFO     | current server update state: UPDATING_FINAL
[2025-04-12 23:32:22] 2025-04-12 22:32:09,860 | INFO     | update_server=False
[2025-04-12 23:32:22] 2025-04-12 22:32:09,860 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-12 23:32:22] 2025-04-12 22:32:09,860 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-12 23:32:22] 2025-04-12 22:32:09,860 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-12 23:32:22] 2025-04-12 22:32:09,861 | INFO     | found 0 job(s) in 20 queues
[2025-04-12 23:32:22] 2025-04-12 22:32:09,861 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-12 23:32:22] 2025-04-12 22:32:09,861 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-12 23:32:22] 2025-04-12 22:32:10,337 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-12 23:32:22] 2025-04-12 22:32:10,337 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-12 23:32:22] 2025-04-12 22:32:10,337 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-12 23:32:22] 2025-04-12 22:32:10,337 | INFO     | will abort loop
[2025-04-12 23:32:22] 2025-04-12 22:32:10,454 | INFO     | all job control threads have been joined
[2025-04-12 23:32:22] 2025-04-12 22:32:10,513 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-12 23:32:22] 2025-04-12 22:32:10,686 | INFO     | all payload control threads have been joined
[2025-04-12 23:32:22] 2025-04-12 22:32:10,840 | INFO     | all data control threads have been joined
[2025-04-12 23:32:22] 2025-04-12 22:32:10,863 | INFO     | [job] retrieve thread has finished
[2025-04-12 23:32:22] 2025-04-12 22:32:10,866 | INFO     | [job] queue monitor thread has finished
[2025-04-12 23:32:22] 2025-04-12 22:32:10,890 | INFO     | [job] validate thread has finished
[2025-04-12 23:32:22] 2025-04-12 22:32:10,959 | INFO     | [payload] validate_pre thread has finished
[2025-04-12 23:32:22] 2025-04-12 22:32:11,174 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-12 23:32:22] 2025-04-12 22:32:11,287 | INFO     | [payload] failed_post thread has finished
[2025-04-12 23:32:22] 2025-04-12 22:32:11,342 | INFO     | [job] job monitor thread has finished
[2025-04-12 23:32:22] 2025-04-12 22:32:11,460 | INFO     | [job] control thread has finished
[2025-04-12 23:32:22] 2025-04-12 22:32:11,691 | INFO     | [payload] control thread has finished
[2025-04-12 23:32:22] 2025-04-12 22:32:11,758 | INFO     | [payload] execute_payloads thread has finished
[2025-04-12 23:32:22] 2025-04-12 22:32:11,845 | INFO     | [data] control thread has finished
[2025-04-12 23:32:22] 2025-04-12 22:32:11,930 | INFO     | [data] copytool_in thread has finished
[2025-04-12 23:32:22] 2025-04-12 22:32:12,171 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-12 23:32:22] 2025-04-12 22:32:12,263 | INFO     | [job] create_data_payload thread has finished
[2025-04-12 23:32:22] 2025-04-12 22:32:12,290 | INFO     | [payload] validate_post thread has finished
[2025-04-12 23:32:22] 2025-04-12 22:32:12,518 | INFO     | [data] copytool_out thread has finished
[2025-04-12 23:32:22] 2025-04-12 22:32:16,176 | INFO     | [data] queue_monitor thread has finished
[2025-04-12 23:32:22] 2025-04-12 22:32:17,063 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128805032851264)>', '<ExcThread(monitor, started 128804676671232)>']
[2025-04-12 23:32:22] 2025-04-12 22:32:17,901 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-12 23:32:22] 2025-04-12 22:32:17,901 | INFO     | [monitor] control thread has ended
[2025-04-12 23:32:22] 2025-04-12 22:32:22,088 | INFO     | all workflow threads have been joined
[2025-04-12 23:32:22] 2025-04-12 22:32:22,088 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-12 23:32:22] 2025-04-12 22:32:22,088 | INFO     | traces error code: 0
[2025-04-12 23:32:22] 2025-04-12 22:32:22,088 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-12 23:32:22] 2025-04-12 22:32:22,123 [wrapper] ==== pilot stdout END ====
[2025-04-12 23:32:22] 2025-04-12 22:32:22,123 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-12 23:32:22] 2025-04-12 22:32:22,124 [wrapper] pilotpid: 415022
[2025-04-12 23:32:22] 2025-04-12 22:32:22,125 [wrapper] Pilot exit status: 0
[2025-04-12 23:32:22] 2025-04-12 22:32:22,128 [wrapper] pandaids: 6600421498
[2025-04-12 23:32:22] 2025-04-12 22:32:22,138 [wrapper] cleanup supervisor_pilot  483356 415023
[2025-04-12 23:32:22] 2025-04-12 22:32:22,138 [wrapper] Test setup, not cleaning
[2025-04-12 23:32:22] 2025-04-12 22:32:22,139 [wrapper] apfmon messages muted
[2025-04-12 23:32:22] 2025-04-12 22:32:22,140 [wrapper] ==== wrapper stdout END ====
[2025-04-12 23:32:22] 2025-04-12 22:32:22,141 [wrapper] ==== wrapper stderr END ====
[2025-04-12 23:32:22]  *** Error codes and diagnostics ***
[2025-04-12 23:32:22]     "exeErrorCode": 0,
[2025-04-12 23:32:22]     "exeErrorDiag": "",
[2025-04-12 23:32:22]     "pilotErrorCode": 0,
[2025-04-12 23:32:22]     "pilotErrorDiag": "",
[2025-04-12 23:32:22]  *** Listing of results directory ***
[2025-04-12 23:32:22] total 405728
[2025-04-12 23:32:22] -rw-r--r-- 1 boinc boinc    495897 Apr 12 12:39 pilot3.tar.gz
[2025-04-12 23:32:22] -rwx------ 1 boinc boinc     37140 Apr 12 12:55 runpilot2-wrapper.sh
[2025-04-12 23:32:22] -rw-r--r-- 1 boinc boinc      5111 Apr 12 12:55 queuedata.json
[2025-04-12 23:32:22] -rw-r--r-- 1 boinc boinc       100 Apr 12 22:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-12 23:32:22] -rwxr-xr-x 1 boinc boinc      7986 Apr 12 22:25 run_atlas
[2025-04-12 23:32:22] -rw-r--r-- 1 boinc boinc       105 Apr 12 22:25 job.xml
[2025-04-12 23:32:22] -rw-r--r-- 2 boinc boinc     17569 Apr 12 22:25 start_atlas.sh
[2025-04-12 23:32:22] drwxrwx--x 1 boinc boinc        76 Apr 12 22:25 shared
[2025-04-12 23:32:22] -rw-r--r-- 2 boinc boinc    508880 Apr 12 22:25 input.tar.gz
[2025-04-12 23:32:22] -rw-r--r-- 1 boinc boinc      6792 Apr 12 22:25 init_data.xml
[2025-04-12 23:32:22] -rw-r--r-- 2 boinc boinc 219953845 Apr 12 22:25 EVNT.44075162._001708.pool.root.1
[2025-04-12 23:32:22] -rw-r--r-- 1 boinc boinc         0 Apr 12 22:25 boinc_lockfile
[2025-04-12 23:32:22] -rw-r--r-- 1 boinc boinc      2550 Apr 12 22:25 pandaJob.out
[2025-04-12 23:32:22] -rw------- 1 boinc boinc       424 Apr 12 22:25 setup.sh.local
[2025-04-12 23:32:22] -rw------- 1 boinc boinc    985800 Apr 12 22:25 agis_schedconf.cvmfs.json
[2025-04-12 23:32:22] -rw------- 1 boinc boinc   1603529 Apr 12 22:25 agis_ddmendpoints.agis.ALL.json
[2025-04-12 23:32:22] drwx------ 1 boinc boinc       368 Apr 12 22:25 pilot3
[2025-04-12 23:32:22] -rw------- 1 boinc boinc 190338493 Apr 12 23:31 HITS.44075164._044002.pool.root.1
[2025-04-12 23:32:22] -rw-r--r-- 1 boinc boinc       529 Apr 12 23:31 boinc_task_state.xml
[2025-04-12 23:32:22] -rw------- 1 boinc boinc        95 Apr 12 23:31 pilot_heartbeat.json
[2025-04-12 23:32:22] -rw------- 1 boinc boinc      1023 Apr 12 23:32 memory_monitor_summary.json
[2025-04-12 23:32:22] -rw------- 1 boinc boinc    240859 Apr 12 23:32 log.44075164._044002.job.log.tgz.1
[2025-04-12 23:32:22] -rw------- 1 boinc boinc      7655 Apr 12 23:32 heartbeat.json
[2025-04-12 23:32:22] -rw-r--r-- 1 boinc boinc      8192 Apr 12 23:32 boinc_mmap_file
[2025-04-12 23:32:22] -rw-r--r-- 1 boinc boinc        27 Apr 12 23:32 wrapper_checkpoint.txt
[2025-04-12 23:32:22] -rw------- 1 boinc boinc      4669 Apr 12 23:32 pilotlog.txt
[2025-04-12 23:32:22] -rw------- 1 boinc boinc    434016 Apr 12 23:32 log.44075164._044002.job.log.1
[2025-04-12 23:32:22] -rw------- 1 boinc boinc       357 Apr 12 23:32 output.list
[2025-04-12 23:32:22] -rw-r--r-- 1 boinc boinc       620 Apr 12 23:32 runtime_log
[2025-04-12 23:32:22] -rw------- 1 boinc boinc    696320 Apr 12 23:32 result.tar.gz
[2025-04-12 23:32:22] -rw------- 1 boinc boinc       643 Apr 12 23:32 wUsMDmTdoN7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmANyKDmZCom4m.diag
[2025-04-12 23:32:22] -rw-r--r-- 1 boinc boinc     11107 Apr 12 23:32 runtime_log.err
[2025-04-12 23:32:22] -rw-r--r-- 1 boinc boinc     21456 Apr 12 23:32 stderr.txt
[2025-04-12 23:32:22] HITS file was successfully produced:
[2025-04-12 23:32:22] -rw------- 1 boinc boinc 190338493 Apr 12 23:31 shared/HITS.pool.root.1
[2025-04-12 23:32:22]  *** Contents of shared directory: ***
[2025-04-12 23:32:22] total 401880
[2025-04-12 23:32:22] -rw-r--r-- 2 boinc boinc     17569 Apr 12 22:25 start_atlas.sh
[2025-04-12 23:32:22] -rw-r--r-- 2 boinc boinc    508880 Apr 12 22:25 input.tar.gz
[2025-04-12 23:32:22] -rw-r--r-- 2 boinc boinc 219953845 Apr 12 22:25 ATLAS.root_0
[2025-04-12 23:32:22] -rw------- 1 boinc boinc 190338493 Apr 12 23:31 HITS.pool.root.1
[2025-04-12 23:32:22] -rw------- 1 boinc boinc    696320 Apr 12 23:32 result.tar.gz
23:32:23 (411252): run_atlas exited; CPU time 13228.938681
23:32:23 (411252): called boinc_finish(0)

</stderr_txt>
]]>

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